Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030837.t1 | XP_013446771.1 | 100 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.70E-102 | 382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030837.t1 | Q9LX90 | 71.1 | 218 | 58 | 2 | 1 | 215 | 1 | 216 | 6.0e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030837.t1 | B7FID7 | 100.0 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.2e-102 | 382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030837 | MS.gene08957 | PPI |
| MS.gene030837 | MS.gene034607 | PPI |
| MS.gene030837 | MS.gene09287 | PPI |
| MS.gene030837 | MS.gene28048 | PPI |
| MS.gene030837 | MS.gene023503 | PPI |
| MS.gene030837 | MS.gene57322 | PPI |
| MS.gene030837 | MS.gene061807 | PPI |
| MS.gene030837 | MS.gene39195 | PPI |
| MS.gene030837 | MS.gene46475 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030837.t1 | MTR_8g089990 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 6.26e-161 | 443 |
| MS.gene030837.t1 | MTR_4g094260 | 72.222 | 198 | 49 | 3 | 22 | 216 | 5 | 199 | 9.32e-95 | 275 |
| MS.gene030837.t1 | MTR_1g073000 | 69.730 | 185 | 48 | 4 | 1 | 177 | 1 | 185 | 2.39e-87 | 256 |
| MS.gene030837.t1 | MTR_1g049070 | 60.150 | 133 | 47 | 2 | 83 | 215 | 24 | 150 | 1.52e-45 | 148 |
| MS.gene030837.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 124 | 265 | 6.61e-42 | 143 |
| MS.gene030837.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 133 | 274 | 7.99e-42 | 143 |
| MS.gene030837.t1 | MTR_3g028140 | 32.121 | 165 | 98 | 4 | 37 | 188 | 454 | 617 | 9.74e-17 | 78.6 |
| MS.gene030837.t1 | MTR_3g028140 | 36.154 | 130 | 74 | 4 | 37 | 158 | 454 | 582 | 4.54e-14 | 70.9 |
| MS.gene030837.t1 | MTR_8g037000 | 34.091 | 132 | 85 | 2 | 34 | 164 | 585 | 715 | 8.59e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030837.t1 | AT5G10350 | 79.358 | 218 | 40 | 2 | 1 | 215 | 1 | 216 | 1.07e-123 | 349 |
| MS.gene030837.t1 | AT5G65260 | 78.182 | 220 | 42 | 2 | 1 | 215 | 1 | 219 | 1.51e-122 | 346 |
| MS.gene030837.t1 | AT5G10350 | 78.922 | 204 | 38 | 2 | 1 | 201 | 1 | 202 | 5.43e-114 | 324 |
| MS.gene030837.t1 | AT5G51120 | 65.934 | 182 | 54 | 4 | 36 | 215 | 52 | 227 | 6.74e-81 | 241 |
| MS.gene030837.t1 | AT5G51120 | 54.338 | 219 | 56 | 4 | 36 | 215 | 52 | 265 | 6.12e-73 | 222 |
| MS.gene030837.t1 | AT5G51120 | 69.014 | 142 | 37 | 3 | 76 | 215 | 6 | 142 | 2.55e-64 | 196 |
| MS.gene030837.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene030837.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene030837.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene030837.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene030837.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 467 | 545 | 2.09e-12 | 65.9 |
| MS.gene030837.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 475 | 553 | 2.41e-12 | 65.9 |
Find 72 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTACTCCCCTTATGGATA+TGG | 0.270018 | 4.2:-11533257 | MS.gene030837:CDS |
| TGTTGAAACTGAAGCTGTTC+AGG | 0.288259 | 4.2:-11533532 | MS.gene030837:CDS |
| CCTTCCATCTCAGCCACGTC+TGG | 0.288464 | 4.2:+11538115 | None:intergenic |
| CCGTACATGTACTCCCCTTA+TGG | 0.301103 | 4.2:-11533263 | MS.gene030837:CDS |
| GCTAAGGTCGAGAAGGAAAT+TGG | 0.324391 | 4.2:-11537977 | MS.gene030837:CDS |
| GAAGAAGAGCATGAGGTTTA+CGG | 0.370305 | 4.2:-11538148 | MS.gene030837:CDS |
| GGACGATATTGTTTCATTCC+AGG | 0.377330 | 4.2:+11533338 | None:intergenic |
| CATATGAAAATCTAATAGTA+TGG | 0.377476 | 4.2:+11533065 | None:intergenic |
| CCTAAGAGGACCAATGTTCC+TGG | 0.382849 | 4.2:-11533356 | MS.gene030837:CDS |
| GCAATTCAGATTCAGATAAC+AGG | 0.397844 | 4.2:+11533502 | None:intergenic |
| CTTACATGGCATATGGCTTC+AGG | 0.398490 | 4.2:-11533301 | MS.gene030837:CDS |
| AGTCATGTGGTACAGTGAAC+AGG | 0.398603 | 4.2:-11533611 | MS.gene030837:CDS |
| TCCACATAAGCAAAACCTTT+AGG | 0.401589 | 4.2:+11533558 | None:intergenic |
| TTCAATCCTTACATGGCATA+TGG | 0.408319 | 4.2:-11533308 | MS.gene030837:CDS |
| AAGGAAATTGGCTCCGTTCA+AGG | 0.424617 | 4.2:-11537965 | MS.gene030837:intron |
| TGCTTCTGTAGCTGCTTCTC+AGG | 0.427087 | 4.2:-11537605 | MS.gene030837:CDS |
| TAGTATGGCATGTAACGATT+TGG | 0.431577 | 4.2:+11533080 | None:intergenic |
| CCAGGAACATTGGTCCTCTT+AGG | 0.432535 | 4.2:+11533356 | None:intergenic |
| GTTTCCAGGTTCTGCCTAAG+AGG | 0.441058 | 4.2:-11533370 | MS.gene030837:intron |
| TGAGATGAGGCGCCGCTTGA+AGG | 0.443239 | 4.2:-11538038 | MS.gene030837:CDS |
| CTTCTTCCATTTCCTTCAAG+CGG | 0.444637 | 4.2:+11538026 | None:intergenic |
| AAGTGTTGCTGCACTTCCTC+TGG | 0.447138 | 4.2:+11533636 | None:intergenic |
| GAGGCGCCGCTTGAAGGAAA+TGG | 0.451064 | 4.2:-11538032 | MS.gene030837:CDS |
| ACTATCCTGACAGACAAGTT+TGG | 0.451284 | 4.2:-11533585 | MS.gene030837:CDS |
| CGATTTGGCCTTCTGTACCT+TGG | 0.467595 | 4.2:+11533095 | None:intergenic |
| CTGAAGCCATATGCCATGTA+AGG | 0.472571 | 4.2:+11533302 | None:intergenic |
| GACAAGTTTGGTCAGCCTAA+AGG | 0.475002 | 4.2:-11533573 | MS.gene030837:CDS |
| AATCCCAGACGTGGCTGAGA+TGG | 0.477332 | 4.2:-11538119 | MS.gene030837:CDS |
| CGATGAAGCCGGTGGTATGA+AGG | 0.484886 | 4.2:-11538068 | MS.gene030837:CDS |
| GCTGACCAAACTTGTCTGTC+AGG | 0.485268 | 4.2:+11533580 | None:intergenic |
| GAATGAAACAATATCGTCCT+AGG | 0.485505 | 4.2:-11533334 | MS.gene030837:CDS |
| TGTACTCCCCTTATGGATAT+GGG | 0.497226 | 4.2:-11533256 | MS.gene030837:intron |
| TTGCGTACCCATATCCATAA+GGG | 0.499244 | 4.2:+11533249 | None:intergenic |
| GTTGCGTACCCATATCCATA+AGG | 0.507988 | 4.2:+11533248 | None:intergenic |
| TGAGAAGCAGCTACAGAAGC+AGG | 0.509186 | 4.2:+11537607 | None:intergenic |
| CCATAAGGGGAGTACATGTA+CGG | 0.512734 | 4.2:+11533263 | None:intergenic |
| ACCGGCTTCATCGTCGGCGG+CGG | 0.522837 | 4.2:+11538078 | None:intergenic |
| CTTCCATCTCAGCCACGTCT+GGG | 0.525363 | 4.2:+11538116 | None:intergenic |
| ATCGAGCTCCTTCATACCAC+CGG | 0.547125 | 4.2:+11538060 | None:intergenic |
| AGCTGCTTCTCAGGAAAACA+AGG | 0.560487 | 4.2:-11537596 | MS.gene030837:CDS |
| TTGTTTCATTCCAGGAACAT+TGG | 0.561559 | 4.2:+11533346 | None:intergenic |
| GATGGATGAAGAAGAGCATG+AGG | 0.564377 | 4.2:-11538155 | MS.gene030837:CDS |
| CATAAGGGGAGTACATGTAC+GGG | 0.571003 | 4.2:+11533264 | None:intergenic |
| TCCGCCGCCGACGATGAAGC+CGG | 0.571081 | 4.2:-11538079 | MS.gene030837:CDS |
| CATACCACCGGCTTCATCGT+CGG | 0.574346 | 4.2:+11538072 | None:intergenic |
| TTCTCAGGAAAACAAGGAGG+AGG | 0.576078 | 4.2:-11537590 | MS.gene030837:CDS |
| CCAGACGTGGCTGAGATGGA+AGG | 0.591120 | 4.2:-11538115 | MS.gene030837:CDS |
| AGCATGCATTTCACGAAGAG+CGG | 0.591158 | 4.2:+11537997 | None:intergenic |
| TCTTCGTGAAATGCATGCTA+AGG | 0.591257 | 4.2:-11537993 | MS.gene030837:CDS |
| TAGGCGATTCAATCCTTACA+TGG | 0.592543 | 4.2:-11533315 | MS.gene030837:CDS |
| GGAAGGCTCCAAGGTACAGA+AGG | 0.594290 | 4.2:-11533103 | MS.gene030837:CDS |
| ATGCATTTCACGAAGAGCGG+CGG | 0.600008 | 4.2:+11538000 | None:intergenic |
| ATCATTATGAAGACCTTGAA+CGG | 0.601110 | 4.2:+11537952 | None:intergenic |
| ACAAGGAGGAGGCAGATGCT+AGG | 0.602973 | 4.2:-11537579 | MS.gene030837:CDS |
| TTATCTGAATCTGAATTGCA+TGG | 0.610170 | 4.2:-11533498 | MS.gene030837:CDS |
| TGAAGGAGCTCGATGAGATG+AGG | 0.616758 | 4.2:-11538051 | MS.gene030837:CDS |
| CAAACTGCAGGAAGGCTCCA+AGG | 0.621276 | 4.2:-11533112 | MS.gene030837:intron |
| GTCATGTGGTACAGTGAACA+GGG | 0.623456 | 4.2:-11533610 | MS.gene030837:CDS |
| ATGTAAGGATTGAATCGCCT+AGG | 0.636374 | 4.2:+11533317 | None:intergenic |
| CAGCAACACTTTCAGTCATG+TGG | 0.638722 | 4.2:-11533624 | MS.gene030837:CDS |
| AATGCATGCTAAGGTCGAGA+AGG | 0.646081 | 4.2:-11537984 | MS.gene030837:CDS |
| CGGAGGAGAAATCCCAGACG+TGG | 0.649618 | 4.2:-11538128 | MS.gene030837:CDS |
| TGAAACTGAAGCTGTTCAGG+AGG | 0.649806 | 4.2:-11533529 | MS.gene030837:CDS |
| TGCGTACCCATATCCATAAG+GGG | 0.658223 | 4.2:+11533250 | None:intergenic |
| GCCGCCGACGATGAAGCCGG+TGG | 0.660392 | 4.2:-11538076 | MS.gene030837:CDS |
| ACCACCGGCTTCATCGTCGG+CGG | 0.666758 | 4.2:+11538075 | None:intergenic |
| TGATTATGCATGCACACCAG+AGG | 0.670537 | 4.2:-11533652 | MS.gene030837:CDS |
| GAAGAGCATGAGGTTTACGG+AGG | 0.680084 | 4.2:-11538145 | MS.gene030837:CDS |
| ACATGGCATATGGCTTCAGG+AGG | 0.690213 | 4.2:-11533298 | MS.gene030837:CDS |
| TGCTTCTCAGGAAAACAAGG+AGG | 0.704124 | 4.2:-11537593 | MS.gene030837:CDS |
| ATAAGGGGAGTACATGTACG+GGG | 0.731461 | 4.2:+11533265 | None:intergenic |
| TAAGGGGAGTACATGTACGG+GGG | 0.772718 | 4.2:+11533266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAAAATTAAAATCAAA+AGG | - | chr4.2:11533901-11533920 | MS.gene030837:intron | 10.0% |
| !! | TCAAAAAATTAAAATCAAAA+GGG | - | chr4.2:11533902-11533921 | MS.gene030837:intron | 10.0% |
| !!! | ATTTTTTATTGTTTTTCAAT+CGG | - | chr4.2:11533713-11533732 | MS.gene030837:intron | 10.0% |
| !! | ACAATTATTAATTGTAAGTT+TGG | - | chr4.2:11535140-11535159 | MS.gene030837:intron | 15.0% |
| !! | ATATAAATACAACAGATATT+GGG | + | chr4.2:11534153-11534172 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTTTTGATGATG+AGG | + | chr4.2:11533897-11533916 | None:intergenic | 15.0% |
| !!! | CATTTATGATCTTTTTAATA+CGG | + | chr4.2:11537256-11537275 | None:intergenic | 15.0% |
| !!! | TATATTTTGCATTTTTCAAA+AGG | - | chr4.2:11537303-11537322 | MS.gene030837:intron | 15.0% |
| !!! | TGTCTTTAAAGTTTAAATTA+AGG | + | chr4.2:11535117-11535136 | None:intergenic | 15.0% |
| !!! | TTGTAAGATATTTTAGAAAT+GGG | + | chr4.2:11536733-11536752 | None:intergenic | 15.0% |
| !!! | TTTGTAAGATATTTTAGAAA+TGG | + | chr4.2:11536734-11536753 | None:intergenic | 15.0% |
| !!! | TTTTGTATGATAAATGAATT+GGG | - | chr4.2:11537477-11537496 | MS.gene030837:intron | 15.0% |
| !!! | TTTTGTTGTTATTAAATTGT+GGG | + | chr4.2:11534765-11534784 | None:intergenic | 15.0% |
| !!! | TTTTTGTATGATAAATGAAT+TGG | - | chr4.2:11537476-11537495 | MS.gene030837:intron | 15.0% |
| !! | AAAAACATACTTTCAATTGA+CGG | + | chr4.2:11537758-11537777 | None:intergenic | 20.0% |
| !! | AAAAATTAAAATCAAAAGGG+CGG | - | chr4.2:11533905-11533924 | MS.gene030837:intron | 20.0% |
| !! | AAAGAAATGAGAAAAGAAAA+AGG | - | chr4.2:11536360-11536379 | MS.gene030837:intron | 20.0% |
| !! | AAATTGATGAAATAGATAGT+AGG | - | chr4.2:11534013-11534032 | MS.gene030837:intron | 20.0% |
| !! | AAATTGTACAAAGTTTATGA+AGG | + | chr4.2:11536822-11536841 | None:intergenic | 20.0% |
| !! | AGAAAGAACATTGAATAAAT+GGG | + | chr4.2:11534935-11534954 | None:intergenic | 20.0% |
| !! | ATACGCTATTTATTACAAAA+TGG | + | chr4.2:11534528-11534547 | None:intergenic | 20.0% |
| !! | ATTAATCGAAAGATAGTATT+AGG | - | chr4.2:11534734-11534753 | MS.gene030837:intron | 20.0% |
| !! | GAATAGATAATGAAATAAGT+TGG | + | chr4.2:11536788-11536807 | None:intergenic | 20.0% |
| !! | GATATAAATACAACAGATAT+TGG | + | chr4.2:11534154-11534173 | None:intergenic | 20.0% |
| !! | TCATAAACTTTGTACAATTT+AGG | - | chr4.2:11536822-11536841 | MS.gene030837:intron | 20.0% |
| !! | TTTAATAACAACAAAAGTCA+CGG | - | chr4.2:11534769-11534788 | MS.gene030837:intron | 20.0% |
| !!! | AAACATTTCAGTTTTATTGA+TGG | - | chr4.2:11533483-11533502 | MS.gene030837:intron | 20.0% |
| !!! | AAACTGCTTTCTTTTAATAA+TGG | - | chr4.2:11534369-11534388 | MS.gene030837:intron | 20.0% |
| !!! | AAATCTGATTTGAGAAAAAA+AGG | + | chr4.2:11535892-11535911 | None:intergenic | 20.0% |
| !!! | ATATTTTAGAAATGGGAAAA+GGG | + | chr4.2:11536726-11536745 | None:intergenic | 20.0% |
| !!! | ATGAATTTTACAGTTCAAAA+TGG | - | chr4.2:11537147-11537166 | MS.gene030837:intron | 20.0% |
| !!! | ATTTGTAGTTTTTGATGATA+CGG | - | chr4.2:11537830-11537849 | MS.gene030837:intron | 20.0% |
| !!! | CTCTTTTTAACATTTTGATT+GGG | - | chr4.2:11533586-11533605 | MS.gene030837:CDS | 20.0% |
| !!! | CTTTTGTTGTTATTAAATTG+TGG | + | chr4.2:11534766-11534785 | None:intergenic | 20.0% |
| !!! | GAAAAATAAAGAACATTTTG+AGG | - | chr4.2:11536382-11536401 | MS.gene030837:intron | 20.0% |
| !!! | GATTTTTAATAGTGTGATTA+TGG | - | chr4.2:11537445-11537464 | MS.gene030837:intron | 20.0% |
| !!! | TATTTAGAATTGACTTTTTG+TGG | - | chr4.2:11538078-11538097 | MS.gene030837:CDS | 20.0% |
| !!! | TCTCTTTTTAACATTTTGAT+TGG | - | chr4.2:11533585-11533604 | MS.gene030837:CDS | 20.0% |
| !!! | TGAATTTTACAGTTCAAAAT+GGG | - | chr4.2:11537148-11537167 | MS.gene030837:intron | 20.0% |
| !!! | TTTGTTTTTTGTTTTCAGAT+AGG | + | chr4.2:11534882-11534901 | None:intergenic | 20.0% |
| ! | AAGTAAAAACAAGAAAGTCA+AGG | - | chr4.2:11535179-11535198 | MS.gene030837:intron | 25.0% |
| ! | AATTATGAGATAAAGACCAA+AGG | + | chr4.2:11536651-11536670 | None:intergenic | 25.0% |
| ! | AATTTGTATACAACGGATAT+TGG | + | chr4.2:11534125-11534144 | None:intergenic | 25.0% |
| ! | AGACAGAACATTGAATAAAT+GGG | + | chr4.2:11534330-11534349 | None:intergenic | 25.0% |
| ! | AGCATACAGAAATTTAAATG+AGG | + | chr4.2:11538011-11538030 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGACCAAA+GGG | + | chr4.2:11536650-11536669 | None:intergenic | 25.0% |
| ! | ATTTGTATACAACGGATATT+GGG | + | chr4.2:11534124-11534143 | None:intergenic | 25.0% |
| ! | CAGAAAGAACATTGAATAAA+TGG | + | chr4.2:11534936-11534955 | None:intergenic | 25.0% |
| ! | GGTGAAAAATTTGTATACAA+CGG | + | chr4.2:11534132-11534151 | None:intergenic | 25.0% |
| ! | TAGTTCGTAATAACTAAATC+AGG | + | chr4.2:11533835-11533854 | None:intergenic | 25.0% |
| ! | TATATATATACTGCAGTATG+CGG | - | chr4.2:11534666-11534685 | MS.gene030837:intron | 25.0% |
| ! | TATTTACCTAATCAACGTAA+AGG | - | chr4.2:11533803-11533822 | MS.gene030837:intron | 25.0% |
| ! | TCTAAATAACAATTGAGCTT+TGG | + | chr4.2:11538066-11538085 | None:intergenic | 25.0% |
| ! | TGTTGTTATGAAATTTAGTG+AGG | - | chr4.2:11536179-11536198 | MS.gene030837:intron | 25.0% |
| ! | TTCATATCCAACTAAACAAT+AGG | + | chr4.2:11533773-11533792 | None:intergenic | 25.0% |
| ! | TTGTAATAAATAGCGTATCA+CGG | - | chr4.2:11534530-11534549 | MS.gene030837:intron | 25.0% |
| !! | ATGTTAACATTGTATTTTGC+GGG | - | chr4.2:11536104-11536123 | MS.gene030837:intron | 25.0% |
| !! | GATGTTAACATTGTATTTTG+CGG | - | chr4.2:11536103-11536122 | MS.gene030837:intron | 25.0% |
| !! | GATTCGAGTTAATTCAATTA+AGG | + | chr4.2:11533361-11533380 | None:intergenic | 25.0% |
| !! | TATAGGCAAACTTCTTTTTA+TGG | - | chr4.2:11537008-11537027 | MS.gene030837:intron | 25.0% |
| !! | TCAAATCAGATTTGTTTCAA+TGG | - | chr4.2:11535899-11535918 | MS.gene030837:intron | 25.0% |
| !! | TGTTTTCACGTTTATGAATT+AGG | - | chr4.2:11536670-11536689 | MS.gene030837:intron | 25.0% |
| !!! | CTGTACAGTTTTTTTTTGTT+TGG | - | chr4.2:11535985-11536004 | MS.gene030837:intron | 25.0% |
| !!! | GATATTTTAGAAATGGGAAA+AGG | + | chr4.2:11536727-11536746 | None:intergenic | 25.0% |
| !!! | TTCCTGATATTTTTTTGTTG+AGG | - | chr4.2:11536694-11536713 | MS.gene030837:intron | 25.0% |
| AAATAGTAGTATGTGTGAGA+AGG | - | chr4.2:11536930-11536949 | MS.gene030837:intron | 30.0% | |
| AAATCACATGGGTACAATAT+TGG | + | chr4.2:11535566-11535585 | None:intergenic | 30.0% | |
| AACATGTTCACCTATAGATA+CGG | + | chr4.2:11534909-11534928 | None:intergenic | 30.0% | |
| AACTGACGATATAGATGATA+TGG | - | chr4.2:11537330-11537349 | MS.gene030837:intron | 30.0% | |
| AATCATGGATCACAAAAAAG+TGG | - | chr4.2:11534448-11534467 | MS.gene030837:intron | 30.0% | |
| ACCAGAATAGAATAATTACG+TGG | + | chr4.2:11535624-11535643 | None:intergenic | 30.0% | |
| ACGAACTAATTTAGTAGTCT+TGG | - | chr4.2:11533847-11533866 | MS.gene030837:intron | 30.0% | |
| AGAAAGTCAAGGATCATAAA+AGG | - | chr4.2:11535190-11535209 | MS.gene030837:intron | 30.0% | |
| AGCCTCAACAAAAAAATATC+AGG | + | chr4.2:11536699-11536718 | None:intergenic | 30.0% | |
| AGGGAAAAATGGCTAAATAA+TGG | + | chr4.2:11534284-11534303 | None:intergenic | 30.0% | |
| ATCATTATGAAGACCTTGAA+CGG | + | chr4.2:11533281-11533300 | None:intergenic | 30.0% | |
| ATGAAATAGATAGTAGGCAA+TGG | - | chr4.2:11534019-11534038 | MS.gene030837:intron | 30.0% | |
| CAAGAATTGCAAAATCACAT+GGG | + | chr4.2:11535577-11535596 | None:intergenic | 30.0% | |
| CAGACAGAACATTGAATAAA+TGG | + | chr4.2:11534331-11534350 | None:intergenic | 30.0% | |
| CATGCTTGCTTATAGATAAA+TGG | + | chr4.2:11535309-11535328 | None:intergenic | 30.0% | |
| CATTTATCTATAAGCAAGCA+TGG | - | chr4.2:11535307-11535326 | MS.gene030837:intron | 30.0% | |
| CATTTGTAACTATTCATGGT+GGG | - | chr4.2:11535817-11535836 | MS.gene030837:intron | 30.0% | |
| CGATTAATAATTATGAGTGC+AGG | + | chr4.2:11534722-11534741 | None:intergenic | 30.0% | |
| GAAAGTCAAGGATCATAAAA+GGG | - | chr4.2:11535191-11535210 | MS.gene030837:intron | 30.0% | |
| GTAAAAGTTAGATGCTGAAT+TGG | + | chr4.2:11533408-11533427 | None:intergenic | 30.0% | |
| TACATACATGTAGAGTGATT+AGG | + | chr4.2:11533958-11533977 | None:intergenic | 30.0% | |
| TAGAATAATTACGTGGAACA+AGG | + | chr4.2:11535617-11535636 | None:intergenic | 30.0% | |
| TCAAGAATTGCAAAATCACA+TGG | + | chr4.2:11535578-11535597 | None:intergenic | 30.0% | |
| TCATGGCTAATTTAAACTCA+AGG | + | chr4.2:11537797-11537816 | None:intergenic | 30.0% | |
| TCCACGTAATTATTCTATTC+TGG | - | chr4.2:11535620-11535639 | MS.gene030837:intron | 30.0% | |
| TGAAGACACATGAATTTCAA+GGG | + | chr4.2:11537555-11537574 | None:intergenic | 30.0% | |
| TGTTGTGAATTACTACTATG+AGG | - | chr4.2:11536899-11536918 | MS.gene030837:intron | 30.0% | |
| TTATCTGAATCTGAATTGCA+TGG | - | chr4.2:11537732-11537751 | MS.gene030837:intron | 30.0% | |
| TTTGCATCCTATTGTTTAGT+TGG | - | chr4.2:11533763-11533782 | MS.gene030837:intron | 30.0% | |
| ! | AAATTTAGTGAGGTATCACA+CGG | - | chr4.2:11536189-11536208 | MS.gene030837:intron | 30.0% |
| ! | CAAACTTCTTTTTATGGAGT+TGG | - | chr4.2:11537014-11537033 | MS.gene030837:intron | 30.0% |
| ! | GAAGCATTTGTAACTATTCA+TGG | - | chr4.2:11535813-11535832 | MS.gene030837:intron | 30.0% |
| ! | GATTTGTTTCAATGGATTTC+AGG | - | chr4.2:11535907-11535926 | MS.gene030837:intron | 30.0% |
| ! | TGAGTATATTGATAACAGGA+CGG | + | chr4.2:11535542-11535561 | None:intergenic | 30.0% |
| ! | TGGTTGAGTATATTGATAAC+AGG | + | chr4.2:11535546-11535565 | None:intergenic | 30.0% |
| !!! | GCTTGATTTGGTTTTATTGT+TGG | - | chr4.2:11537036-11537055 | MS.gene030837:intron | 30.0% |
| !!! | GTTGTTTTTTGTTTTCAGAG+AGG | + | chr4.2:11535282-11535301 | None:intergenic | 30.0% |
| !!! | TGATTTGGTTTTATTGTTGG+TGG | - | chr4.2:11537039-11537058 | MS.gene030837:intron | 30.0% |
| !!! | TTTTTTAGGCTCATAGTAGA+GGG | - | chr4.2:11536140-11536159 | MS.gene030837:intron | 30.0% |
| AAAAGTCACGGATCATAAAG+GGG | - | chr4.2:11534781-11534800 | MS.gene030837:intron | 35.0% | |
| AAAATTTGTATGCCACGTAG+AGG | + | chr4.2:11534098-11534117 | None:intergenic | 35.0% | |
| AACAAACCAACCGTATCTAT+AGG | - | chr4.2:11534896-11534915 | MS.gene030837:intron | 35.0% | |
| AATGTTCTTTCTGTCAAACC+AGG | - | chr4.2:11534943-11534962 | MS.gene030837:intron | 35.0% | |
| AATTACGTGGAACAAGGAAA+AGG | + | chr4.2:11535611-11535630 | None:intergenic | 35.0% | |
| ACAAAAGTCACGGATCATAA+AGG | - | chr4.2:11534779-11534798 | MS.gene030837:intron | 35.0% | |
| ACTAACAATCTTCAGAGACA+GGG | - | chr4.2:11536015-11536034 | MS.gene030837:intron | 35.0% | |
| AGATGATTCAACTTCACAAC+TGG | - | chr4.2:11536471-11536490 | MS.gene030837:intron | 35.0% | |
| ATCAGAACACAACTGTCATT+TGG | + | chr4.2:11535427-11535446 | None:intergenic | 35.0% | |
| ATGAGTGAAATGCACAATGA+AGG | - | chr4.2:11536981-11537000 | MS.gene030837:intron | 35.0% | |
| ATGTTCTTTCTGTCAAACCA+GGG | - | chr4.2:11534944-11534963 | MS.gene030837:intron | 35.0% | |
| ATTACGTGGAACAAGGAAAA+GGG | + | chr4.2:11535610-11535629 | None:intergenic | 35.0% | |
| ATTAGTTCACACACGCTATT+AGG | - | chr4.2:11535775-11535794 | MS.gene030837:intron | 35.0% | |
| CAAAAGTCACGGATCATAAA+GGG | - | chr4.2:11534780-11534799 | MS.gene030837:intron | 35.0% | |
| CCTAATCAACGTAAAGGATA+AGG | - | chr4.2:11533809-11533828 | MS.gene030837:intron | 35.0% | |
| CTGAAGACACATGAATTTCA+AGG | + | chr4.2:11537556-11537575 | None:intergenic | 35.0% | |
| CTGATGTGTGAAATAAGGAT+TGG | - | chr4.2:11535442-11535461 | MS.gene030837:intron | 35.0% | |
| CTTGAAATTCATGTGTCTTC+AGG | - | chr4.2:11537554-11537573 | MS.gene030837:intron | 35.0% | |
| GAATGAAACAATATCGTCCT+AGG | - | chr4.2:11537896-11537915 | MS.gene030837:intron | 35.0% | |
| GACGACAAAAAAGAACAAGT+TGG | + | chr4.2:11534061-11534080 | None:intergenic | 35.0% | |
| GAGATCAATGTTGTCAATCA+TGG | - | chr4.2:11534433-11534452 | MS.gene030837:intron | 35.0% | |
| GCAATTCAGATTCAGATAAC+AGG | + | chr4.2:11537731-11537750 | None:intergenic | 35.0% | |
| GCATTTGTAACTATTCATGG+TGG | - | chr4.2:11535816-11535835 | MS.gene030837:intron | 35.0% | |
| GTATCTATAGGTGAACATGT+TGG | - | chr4.2:11534908-11534927 | MS.gene030837:intron | 35.0% | |
| GTGTTCTGATGTGTGAAATA+AGG | - | chr4.2:11535437-11535456 | MS.gene030837:intron | 35.0% | |
| GTTAATCACGACGATAATCA+TGG | + | chr4.2:11533450-11533469 | None:intergenic | 35.0% | |
| TAACATCCAGCGCTAATTAT+AGG | + | chr4.2:11536090-11536109 | None:intergenic | 35.0% | |
| TACAAGTCACCTAAAGAATG+AGG | + | chr4.2:11536860-11536879 | None:intergenic | 35.0% | |
| TACTAACAATCTTCAGAGAC+AGG | - | chr4.2:11536014-11536033 | MS.gene030837:intron | 35.0% | |
| TAGTATGGCATGTAACGATT+TGG | + | chr4.2:11538153-11538172 | None:intergenic | 35.0% | |
| TATATGCAAGACTCATGTCT+CGG | + | chr4.2:11537420-11537439 | None:intergenic | 35.0% | |
| TCCACATAAGCAAAACCTTT+AGG | + | chr4.2:11537675-11537694 | None:intergenic | 35.0% | |
| TGCAATCTTCCTCATTCTTT+AGG | - | chr4.2:11536848-11536867 | MS.gene030837:intron | 35.0% | |
| TGTCTCTTAACTCCATTATG+TGG | - | chr4.2:11534215-11534234 | MS.gene030837:intron | 35.0% | |
| TGTGAATTACTACTATGAGG+AGG | - | chr4.2:11536902-11536921 | MS.gene030837:intron | 35.0% | |
| TTCAATCCTTACATGGCATA+TGG | - | chr4.2:11537922-11537941 | MS.gene030837:intron | 35.0% | |
| TTGTTTCATTCCAGGAACAT+TGG | + | chr4.2:11537887-11537906 | None:intergenic | 35.0% | |
| ! | ATAATGGAGTTAAGAGACAG+AGG | + | chr4.2:11534214-11534233 | None:intergenic | 35.0% |
| ! | CCTTATCCTTTACGTTGATT+AGG | + | chr4.2:11533812-11533831 | None:intergenic | 35.0% |
| ! | GAATGTCGTCTTTGAAAAGT+AGG | - | chr4.2:11534842-11534861 | MS.gene030837:intron | 35.0% |
| ! | GTGCATTTCACTCATTTTAC+AGG | + | chr4.2:11536976-11536995 | None:intergenic | 35.0% |
| ! | TAACATTGTATTTTGCGGGT+GGG | - | chr4.2:11536108-11536127 | MS.gene030837:intron | 35.0% |
| ! | TTAACATTGTATTTTGCGGG+TGG | - | chr4.2:11536107-11536126 | MS.gene030837:intron | 35.0% |
| !! | CATTTTGAGGAAACTGTGAA+TGG | - | chr4.2:11536395-11536414 | MS.gene030837:intron | 35.0% |
| !! | GAATAAATGGGCTGAAACTA+AGG | + | chr4.2:11534318-11534337 | None:intergenic | 35.0% |
| !! | GACGTCTTTCAATTTTGAAG+CGG | + | chr4.2:11535232-11535251 | None:intergenic | 35.0% |
| !! | TTGTTTTTCAATCGGAACCA+TGG | - | chr4.2:11533721-11533740 | MS.gene030837:intron | 35.0% |
| !! | TTTATGGAGTTGGCTTGATT+TGG | - | chr4.2:11537024-11537043 | MS.gene030837:intron | 35.0% |
| !! | TTTTTAGGCTCATAGTAGAG+GGG | - | chr4.2:11536141-11536160 | MS.gene030837:intron | 35.0% |
| !!! | GTTTTTTAGGCTCATAGTAG+AGG | - | chr4.2:11536139-11536158 | MS.gene030837:intron | 35.0% |
| AAAGTCACGGATCATAAAGG+GGG | - | chr4.2:11534782-11534801 | MS.gene030837:intron | 40.0% | |
| AAATTCACTAGACGAGCTCA+TGG | + | chr4.2:11537814-11537833 | None:intergenic | 40.0% | |
| AATGTTCTGTCTGTCAAACC+AGG | - | chr4.2:11534338-11534357 | MS.gene030837:intron | 40.0% | |
| ACAACAGTACCAACCTTATC+AGG | + | chr4.2:11536885-11536904 | None:intergenic | 40.0% | |
| ACATCCTCACAAATTCAGAG+AGG | + | chr4.2:11535390-11535409 | None:intergenic | 40.0% | |
| ACCTAGTTGCAGTCAACAAA+AGG | + | chr4.2:11536568-11536587 | None:intergenic | 40.0% | |
| ACTATCCTGACAGACAAGTT+TGG | - | chr4.2:11537645-11537664 | MS.gene030837:intron | 40.0% | |
| ACTTGTAGACCTGATAAGGT+TGG | - | chr4.2:11536873-11536892 | MS.gene030837:intron | 40.0% | |
| AGGCTTATGTGGCATTCATT+TGG | + | chr4.2:11534194-11534213 | None:intergenic | 40.0% | |
| ATATATACTGCAGTATGCGG+AGG | - | chr4.2:11534669-11534688 | MS.gene030837:intron | 40.0% | |
| ATATGTCTCACTATGATCGC+AGG | - | chr4.2:11536044-11536063 | MS.gene030837:intron | 40.0% | |
| ATGAGCCTAAAAAACACCAG+TGG | + | chr4.2:11536134-11536153 | None:intergenic | 40.0% | |
| ATGGTATCAAATAGCAGCTG+TGG | + | chr4.2:11534509-11534528 | None:intergenic | 40.0% | |
| ATGTAAGGATTGAATCGCCT+AGG | + | chr4.2:11537916-11537935 | None:intergenic | 40.0% | |
| ATGTACTCCCCTTATGGATA+TGG | - | chr4.2:11537973-11537992 | MS.gene030837:CDS | 40.0% | |
| ATGTTCTGTCTGTCAAACCA+GGG | - | chr4.2:11534339-11534358 | MS.gene030837:intron | 40.0% | |
| ATTTATCCTGTTGAGTGCAG+AGG | - | chr4.2:11535065-11535084 | MS.gene030837:intron | 40.0% | |
| CAGAAACTGAGTCCACATAA+TGG | + | chr4.2:11534230-11534249 | None:intergenic | 40.0% | |
| CTGAATTGGATTGCATGCAA+TGG | + | chr4.2:11533394-11533413 | None:intergenic | 40.0% | |
| CTTCTTCCATTTCCTTCAAG+CGG | + | chr4.2:11533207-11533226 | None:intergenic | 40.0% | |
| GACTTCACAATGACTTTGCA+GGG | - | chr4.2:11537172-11537191 | MS.gene030837:intron | 40.0% | |
| GATACGGATGTTATGTTTCC+AGG | - | chr4.2:11537846-11537865 | MS.gene030837:intron | 40.0% | |
| GGACGATATTGTTTCATTCC+AGG | + | chr4.2:11537895-11537914 | None:intergenic | 40.0% | |
| GGCATTCATTTGGTCTAACA+CGG | + | chr4.2:11534184-11534203 | None:intergenic | 40.0% | |
| GGGGGAAAATTCAGAATTAG+TGG | - | chr4.2:11534800-11534819 | MS.gene030837:intron | 40.0% | |
| GTGAAATGCACAATGAAGGA+TGG | - | chr4.2:11536985-11537004 | MS.gene030837:intron | 40.0% | |
| GTGGGAACATTAGGAATTTG+AGG | - | chr4.2:11535835-11535854 | MS.gene030837:intron | 40.0% | |
| GTTACCTCTCTGAATTTGTG+AGG | - | chr4.2:11535383-11535402 | MS.gene030837:intron | 40.0% | |
| TAGGCGATTCAATCCTTACA+TGG | - | chr4.2:11537915-11537934 | MS.gene030837:intron | 40.0% | |
| TATGTCTCACTATGATCGCA+GGG | - | chr4.2:11536045-11536064 | MS.gene030837:intron | 40.0% | |
| TCTTCGTGAAATGCATGCTA+AGG | - | chr4.2:11533237-11533256 | MS.gene030837:intron | 40.0% | |
| TGACTTCACAATGACTTTGC+AGG | - | chr4.2:11537171-11537190 | MS.gene030837:intron | 40.0% | |
| TGATTCAACTTCACAACTGG+AGG | - | chr4.2:11536474-11536493 | MS.gene030837:intron | 40.0% | |
| TGCACAATGAAGGATGGTAT+AGG | - | chr4.2:11536991-11537010 | MS.gene030837:intron | 40.0% | |
| TGCATGCAATGGAGTTGAAT+CGG | + | chr4.2:11533383-11533402 | None:intergenic | 40.0% | |
| TGTACTCCCCTTATGGATAT+GGG | - | chr4.2:11537974-11537993 | MS.gene030837:CDS | 40.0% | |
| TGTTCACCTATAGATACGGT+TGG | + | chr4.2:11534905-11534924 | None:intergenic | 40.0% | |
| TGTTCTTTCTGTCAAACCAG+GGG | - | chr4.2:11534945-11534964 | MS.gene030837:intron | 40.0% | |
| TGTTGAAACTGAAGCTGTTC+AGG | - | chr4.2:11537698-11537717 | MS.gene030837:intron | 40.0% | |
| TTAAGAGACAGAGGCTTATG+TGG | + | chr4.2:11534205-11534224 | None:intergenic | 40.0% | |
| TTGCGTACCCATATCCATAA+GGG | + | chr4.2:11537984-11538003 | None:intergenic | 40.0% | |
| TTTATACCTCTGCACTCAAC+AGG | + | chr4.2:11535074-11535093 | None:intergenic | 40.0% | |
| ! | AAAAGAACAAGTTGGAAGCG+AGG | + | chr4.2:11534053-11534072 | None:intergenic | 40.0% |
| ! | ACTGTCATTTGGTCTCTGTT+CGG | + | chr4.2:11535416-11535435 | None:intergenic | 40.0% |
| ! | CTATTCATGGTGGGAACATT+AGG | - | chr4.2:11535826-11535845 | MS.gene030837:intron | 40.0% |
| ! | GAAGAAGAGCATGAGGTTTA+CGG | - | chr4.2:11533082-11533101 | MS.gene030837:CDS | 40.0% |
| ! | GCCTAAAGGTTTTGCTTATG+TGG | - | chr4.2:11537671-11537690 | MS.gene030837:intron | 40.0% |
| ! | TAGGAATTTGAGGCCTTCAT+TGG | - | chr4.2:11535845-11535864 | MS.gene030837:intron | 40.0% |
| ! | TCAGAATGCTGTGAGTTTTC+TGG | - | chr4.2:11535477-11535496 | MS.gene030837:intron | 40.0% |
| ! | TGTGTGAAATAAGGATTGGC+TGG | - | chr4.2:11535446-11535465 | MS.gene030837:intron | 40.0% |
| ! | TTTTAGGCTCATAGTAGAGG+GGG | - | chr4.2:11536142-11536161 | MS.gene030837:intron | 40.0% |
| ! | TTTTTCGTCAAACTGCAGGA+AGG | - | chr4.2:11538110-11538129 | MS.gene030837:CDS | 40.0% |
| !! | ATGCTCTAAGAGAGTTGGTT+TGG | - | chr4.2:11535502-11535521 | MS.gene030837:intron | 40.0% |
| !! | TCCTTTTGTTGACTGCAACT+AGG | - | chr4.2:11536564-11536583 | MS.gene030837:intron | 40.0% |
| !! | TCTGTTTTTCGTCAAACTGC+AGG | - | chr4.2:11538106-11538125 | MS.gene030837:CDS | 40.0% |
| !! | TGGAAATGCTCTAAGAGAGT+TGG | - | chr4.2:11535497-11535516 | MS.gene030837:intron | 40.0% |
| !!! | GAATTGGGTTTTAGCTCATC+TGG | - | chr4.2:11537492-11537511 | MS.gene030837:intron | 40.0% |
| !!! | GATGCTAGGTCTGTTTTTGT+CGG | - | chr4.2:11533665-11533684 | MS.gene030837:intron | 40.0% |
| !!! | GTTTTATTGTTGGTGGCTTG+TGG | - | chr4.2:11537046-11537065 | MS.gene030837:intron | 40.0% |
| AAAATCAAAAGGGCGGCAGT+TGG | - | chr4.2:11533912-11533931 | MS.gene030837:intron | 45.0% | |
| AATGCATGCTAAGGTCGAGA+AGG | - | chr4.2:11533246-11533265 | MS.gene030837:intron | 45.0% | |
| ACGTGTCCTATAATTAGCGC+TGG | - | chr4.2:11536081-11536100 | MS.gene030837:intron | 45.0% | |
| AGCATGCATTTCACGAAGAG+CGG | + | chr4.2:11533236-11533255 | None:intergenic | 45.0% | |
| AGCTGCTTCTCAGGAAAACA+AGG | - | chr4.2:11533634-11533653 | MS.gene030837:CDS | 45.0% | |
| AGTCATGTGGTACAGTGAAC+AGG | - | chr4.2:11537619-11537638 | MS.gene030837:intron | 45.0% | |
| AGTTTCTGCCATGCTCATGA+GGG | + | chr4.2:11536424-11536443 | None:intergenic | 45.0% | |
| ATTTGGTCTAACACGGTGAC+AGG | + | chr4.2:11534177-11534196 | None:intergenic | 45.0% | |
| CAGCAACACTTTCAGTCATG+TGG | - | chr4.2:11537606-11537625 | MS.gene030837:CDS | 45.0% | |
| CTGAAGCCATATGCCATGTA+AGG | + | chr4.2:11537931-11537950 | None:intergenic | 45.0% | |
| CTTACATGGCATATGGCTTC+AGG | - | chr4.2:11537929-11537948 | MS.gene030837:intron | 45.0% | |
| GACAAGTTTGGTCAGCCTAA+AGG | - | chr4.2:11537657-11537676 | MS.gene030837:intron | 45.0% | |
| GACACTCGCTATAGCATAGA+CGG | + | chr4.2:11534485-11534504 | None:intergenic | 45.0% | |
| GATCTCAAAGCTGCTATTGC+AGG | - | chr4.2:11535029-11535048 | MS.gene030837:intron | 45.0% | |
| GCAGAAACTAGTACAGCTGA+AGG | - | chr4.2:11536435-11536454 | MS.gene030837:intron | 45.0% | |
| GCTAAGGTCGAGAAGGAAAT+TGG | - | chr4.2:11533253-11533272 | MS.gene030837:intron | 45.0% | |
| GGATGCAAACATGCACGTAA+AGG | + | chr4.2:11533752-11533771 | None:intergenic | 45.0% | |
| GTCATGTGGTACAGTGAACA+GGG | - | chr4.2:11537620-11537639 | MS.gene030837:intron | 45.0% | |
| GTTGCGTACCCATATCCATA+AGG | + | chr4.2:11537985-11538004 | None:intergenic | 45.0% | |
| TAGTTTCTGCCATGCTCATG+AGG | + | chr4.2:11536425-11536444 | None:intergenic | 45.0% | |
| TGAAACTGAAGCTGTTCAGG+AGG | - | chr4.2:11537701-11537720 | MS.gene030837:intron | 45.0% | |
| TGATTATGCATGCACACCAG+AGG | - | chr4.2:11537578-11537597 | MS.gene030837:CDS | 45.0% | |
| TGCAAACATGCACGTAAAGG+AGG | + | chr4.2:11533749-11533768 | None:intergenic | 45.0% | |
| TGCGTACCCATATCCATAAG+GGG | + | chr4.2:11537983-11538002 | None:intergenic | 45.0% | |
| TGCTTCTCAGGAAAACAAGG+AGG | - | chr4.2:11533637-11533656 | MS.gene030837:CDS | 45.0% | |
| TGTTCTGTCTGTCAAACCAG+GGG | - | chr4.2:11534340-11534359 | MS.gene030837:intron | 45.0% | |
| TTCTCAGGAAAACAAGGAGG+AGG | - | chr4.2:11533640-11533659 | MS.gene030837:CDS | 45.0% | |
| TTGGGCAAATGACACAGTAG+AGG | + | chr4.2:11536599-11536618 | None:intergenic | 45.0% | |
| TTTGGTCTAACACGGTGACA+GGG | + | chr4.2:11534176-11534195 | None:intergenic | 45.0% | |
| ! | AAGGAAATTGGCTCCGTTCA+AGG | - | chr4.2:11533265-11533284 | MS.gene030837:CDS | 45.0% |
| ! | AGGCTTTTCTCAAACTCCAC+AGG | + | chr4.2:11536956-11536975 | None:intergenic | 45.0% |
| ! | ATAAGGGGAGTACATGTACG+GGG | + | chr4.2:11537968-11537987 | None:intergenic | 45.0% |
| ! | ATGCGGAGGTATAAATGCTC+AGG | - | chr4.2:11534683-11534702 | MS.gene030837:intron | 45.0% |
| ! | CATAAGGGGAGTACATGTAC+GGG | + | chr4.2:11537969-11537988 | None:intergenic | 45.0% |
| ! | CCATAAGGGGAGTACATGTA+CGG | + | chr4.2:11537970-11537989 | None:intergenic | 45.0% |
| ! | GAGACAGCTTGTGGTTCTTT+TGG | - | chr4.2:11536496-11536515 | MS.gene030837:intron | 45.0% |
| ! | GGTGACTTGTAGACCTGATA+AGG | - | chr4.2:11536869-11536888 | MS.gene030837:intron | 45.0% |
| ! | TTTAGTGAGGTATCACACGG+AGG | - | chr4.2:11536192-11536211 | MS.gene030837:intron | 45.0% |
| !! | ATAGCAGCTTTGAGATCAGC+TGG | + | chr4.2:11535026-11535045 | None:intergenic | 45.0% |
| !! | CCATTTTTCCCTCTTAGACC+GGG | - | chr4.2:11534292-11534311 | MS.gene030837:intron | 45.0% |
| !! | TAGCAGCTTTGAGATCAGCT+GGG | + | chr4.2:11535025-11535044 | None:intergenic | 45.0% |
| !!! | GCCATTTTTCCCTCTTAGAC+CGG | - | chr4.2:11534291-11534310 | MS.gene030837:intron | 45.0% |
| AAACCAGGGGTCGCAGAATT+TGG | - | chr4.2:11534958-11534977 | MS.gene030837:intron | 50.0% | |
| AAACTAAGGCCCGGTCTAAG+AGG | + | chr4.2:11534304-11534323 | None:intergenic | 50.0% | |
| AACAACAGCTGCACACCCTT+TGG | + | chr4.2:11536626-11536645 | None:intergenic | 50.0% | |
| AACCAGGGGTCGCAGAATTT+GGG | - | chr4.2:11534959-11534978 | MS.gene030837:intron | 50.0% | |
| AACTAAGGCCCGGTCTAAGA+GGG | + | chr4.2:11534303-11534322 | None:intergenic | 50.0% | |
| AATGGCATCCCTCATGAGCA+TGG | - | chr4.2:11536413-11536432 | MS.gene030837:intron | 50.0% | |
| ACATGGCATATGGCTTCAGG+AGG | - | chr4.2:11537932-11537951 | MS.gene030837:intron | 50.0% | |
| AGTATGTGTGAGAAGGCCTG+TGG | - | chr4.2:11536937-11536956 | MS.gene030837:intron | 50.0% | |
| ATCGAGCTCCTTCATACCAC+CGG | + | chr4.2:11533173-11533192 | None:intergenic | 50.0% | |
| ATGCATTTCACGAAGAGCGG+CGG | + | chr4.2:11533233-11533252 | None:intergenic | 50.0% | |
| ATTCCACAACGCTGTAGTGC+TGG | - | chr4.2:11534573-11534592 | MS.gene030837:intron | 50.0% | |
| CATTTGCCCAACGTGCCAAA+GGG | - | chr4.2:11536608-11536627 | MS.gene030837:intron | 50.0% | |
| CCAGGAACATTGGTCCTCTT+AGG | + | chr4.2:11537877-11537896 | None:intergenic | 50.0% | |
| CCCGGTCTAAGAGGGAAAAA+TGG | + | chr4.2:11534295-11534314 | None:intergenic | 50.0% | |
| CCGTACATGTACTCCCCTTA+TGG | - | chr4.2:11537967-11537986 | MS.gene030837:CDS | 50.0% | |
| CCTAAGAGGACCAATGTTCC+TGG | - | chr4.2:11537874-11537893 | MS.gene030837:intron | 50.0% | |
| CGCATTTACTGTCCTCTACG+TGG | - | chr4.2:11534083-11534102 | MS.gene030837:intron | 50.0% | |
| GATTTCAGGCTGAGCTGCAT+AGG | - | chr4.2:11535921-11535940 | MS.gene030837:intron | 50.0% | |
| GCTGACCAAACTTGTCTGTC+AGG | + | chr4.2:11537653-11537672 | None:intergenic | 50.0% | |
| GTTGACTGCAACTAGGTCAG+TGG | - | chr4.2:11536571-11536590 | MS.gene030837:intron | 50.0% | |
| GTTTCCAGGTTCTGCCTAAG+AGG | - | chr4.2:11537860-11537879 | MS.gene030837:intron | 50.0% | |
| TCATTTGCCCAACGTGCCAA+AGG | - | chr4.2:11536607-11536626 | MS.gene030837:intron | 50.0% | |
| TCTCCGCTCACAACCAATGA+AGG | + | chr4.2:11535861-11535880 | None:intergenic | 50.0% | |
| TGAAGGAGCTCGATGAGATG+AGG | - | chr4.2:11533179-11533198 | MS.gene030837:intron | 50.0% | |
| TGAGAAGCAGCTACAGAAGC+AGG | + | chr4.2:11533626-11533645 | None:intergenic | 50.0% | |
| TGCACGTAAAGGAGGAACCA+TGG | + | chr4.2:11533741-11533760 | None:intergenic | 50.0% | |
| TGCTTCTGTAGCTGCTTCTC+AGG | - | chr4.2:11533625-11533644 | MS.gene030837:CDS | 50.0% | |
| ! | AAGTGTTGCTGCACTTCCTC+TGG | + | chr4.2:11537597-11537616 | None:intergenic | 50.0% |
| ! | AGGCCTTCATTGGTTGTGAG+CGG | - | chr4.2:11535855-11535874 | MS.gene030837:intron | 50.0% |
| ! | CGATTTGGCCTTCTGTACCT+TGG | + | chr4.2:11538138-11538157 | None:intergenic | 50.0% |
| ! | GAAGAGCATGAGGTTTACGG+AGG | - | chr4.2:11533085-11533104 | MS.gene030837:CDS | 50.0% |
| ! | TAAGGGGAGTACATGTACGG+GGG | + | chr4.2:11537967-11537986 | None:intergenic | 50.0% |
| ! | TACATGTACGGGGGAGCATA+AGG | + | chr4.2:11537958-11537977 | None:intergenic | 50.0% |
| !! | AATGGGCTGAAACTAAGGCC+CGG | + | chr4.2:11534313-11534332 | None:intergenic | 50.0% |
| !! | GTGCAGCTGTTGTTTCCCTT+TGG | - | chr4.2:11536632-11536651 | MS.gene030837:intron | 50.0% |
| !!! | GTGGGCCACTGGTGTTTTTT+AGG | - | chr4.2:11536126-11536145 | MS.gene030837:intron | 50.0% |
| AATCCCAGACGTGGCTGAGA+TGG | - | chr4.2:11533111-11533130 | MS.gene030837:intron | 55.0% | |
| ACAAGGAGGAGGCAGATGCT+AGG | - | chr4.2:11533651-11533670 | MS.gene030837:CDS | 55.0% | |
| ACCAGGGGTCGCAGAATTTG+GGG | - | chr4.2:11534960-11534979 | MS.gene030837:intron | 55.0% | |
| CAAACTGCAGGAAGGCTCCA+AGG | - | chr4.2:11538118-11538137 | MS.gene030837:CDS | 55.0% | |
| CAACTGGAGGAGACAGCTTG+TGG | - | chr4.2:11536487-11536506 | MS.gene030837:intron | 55.0% | |
| CGATGAAGCCGGTGGTATGA+AGG | - | chr4.2:11533162-11533181 | MS.gene030837:intron | 55.0% | |
| CTGTCTGTCAAACCAGGGGT+CGG | - | chr4.2:11534344-11534363 | MS.gene030837:intron | 55.0% | |
| CTTCCATCTCAGCCACGTCT+GGG | + | chr4.2:11533117-11533136 | None:intergenic | 55.0% | |
| GGAAGGCTCCAAGGTACAGA+AGG | - | chr4.2:11538127-11538146 | MS.gene030837:CDS | 55.0% | |
| TGCACACCCTTTGGCACGTT+GGG | + | chr4.2:11536617-11536636 | None:intergenic | 55.0% | |
| TGGTCCTCTTAGGCAGAACC+TGG | + | chr4.2:11537867-11537886 | None:intergenic | 55.0% | |
| !! | CATACCACCGGCTTCATCGT+CGG | + | chr4.2:11533161-11533180 | None:intergenic | 55.0% |
| AAAGCAGTTTCGCCGACCCC+TGG | + | chr4.2:11534359-11534378 | None:intergenic | 60.0% | |
| ACCCCAAATTCTGCGACCCC+TGG | + | chr4.2:11534964-11534983 | None:intergenic | 60.0% | |
| CCACCAGCACTACAGCGTTG+TGG | + | chr4.2:11534579-11534598 | None:intergenic | 60.0% | |
| CCAGACGTGGCTGAGATGGA+AGG | - | chr4.2:11533115-11533134 | MS.gene030837:intron | 60.0% | |
| CCTTCCATCTCAGCCACGTC+TGG | + | chr4.2:11533118-11533137 | None:intergenic | 60.0% | |
| CGGAGGAGAAATCCCAGACG+TGG | - | chr4.2:11533102-11533121 | MS.gene030837:CDS | 60.0% | |
| CTGCACACCCTTTGGCACGT+TGG | + | chr4.2:11536618-11536637 | None:intergenic | 60.0% | |
| ! | CCACAACGCTGTAGTGCTGG+TGG | - | chr4.2:11534576-11534595 | MS.gene030837:intron | 60.0% |
| ! | GTATTTTGCGGGTGGGCCAC+TGG | - | chr4.2:11536115-11536134 | MS.gene030837:intron | 60.0% |
| !! | GAGGCGCCGCTTGAAGGAAA+TGG | - | chr4.2:11533198-11533217 | MS.gene030837:intron | 60.0% |
| !! | TGAGATGAGGCGCCGCTTGA+AGG | - | chr4.2:11533192-11533211 | MS.gene030837:intron | 60.0% |
| !! | ACCACCGGCTTCATCGTCGG+CGG | + | chr4.2:11533158-11533177 | None:intergenic | 65.0% |
| TCCGCCGCCGACGATGAAGC+CGG | - | chr4.2:11533151-11533170 | MS.gene030837:intron | 70.0% | |
| ! | ACCGGCTTCATCGTCGGCGG+CGG | + | chr4.2:11533155-11533174 | None:intergenic | 70.0% |
| GCCGCCGACGATGAAGCCGG+TGG | - | chr4.2:11533154-11533173 | MS.gene030837:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 11533076 | 11538176 | 11533076 | ID=MS.gene030837 |
| chr4.2 | mRNA | 11533076 | 11538176 | 11533076 | ID=MS.gene030837.t1;Parent=MS.gene030837 |
| chr4.2 | exon | 11537966 | 11538176 | 11537966 | ID=MS.gene030837.t1.exon1;Parent=MS.gene030837.t1 |
| chr4.2 | CDS | 11537966 | 11538176 | 11537966 | ID=cds.MS.gene030837.t1;Parent=MS.gene030837.t1 |
| chr4.2 | exon | 11537561 | 11537631 | 11537561 | ID=MS.gene030837.t1.exon2;Parent=MS.gene030837.t1 |
| chr4.2 | CDS | 11537561 | 11537631 | 11537561 | ID=cds.MS.gene030837.t1;Parent=MS.gene030837.t1 |
| chr4.2 | exon | 11533485 | 11533676 | 11533485 | ID=MS.gene030837.t1.exon3;Parent=MS.gene030837.t1 |
| chr4.2 | CDS | 11533485 | 11533676 | 11533485 | ID=cds.MS.gene030837.t1;Parent=MS.gene030837.t1 |
| chr4.2 | exon | 11533257 | 11533384 | 11533257 | ID=MS.gene030837.t1.exon4;Parent=MS.gene030837.t1 |
| chr4.2 | CDS | 11533257 | 11533384 | 11533257 | ID=cds.MS.gene030837.t1;Parent=MS.gene030837.t1 |
| chr4.2 | exon | 11533076 | 11533124 | 11533076 | ID=MS.gene030837.t1.exon5;Parent=MS.gene030837.t1 |
| chr4.2 | CDS | 11533076 | 11533124 | 11533076 | ID=cds.MS.gene030837.t1;Parent=MS.gene030837.t1 |
| Gene Sequence |
| Protein sequence |
