Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061807.t1 | XP_013446771.1 | 100 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.70E-102 | 382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061807.t1 | Q9LX90 | 71.1 | 218 | 58 | 2 | 1 | 215 | 1 | 216 | 6.0e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061807.t1 | B7FID7 | 100.0 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.2e-102 | 382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39195 | MS.gene061807 | PPI |
| MS.gene061807 | MS.gene023503 | PPI |
| MS.gene09287 | MS.gene061807 | PPI |
| MS.gene061807 | MS.gene08957 | PPI |
| MS.gene030837 | MS.gene061807 | PPI |
| MS.gene061807 | MS.gene034607 | PPI |
| MS.gene061807 | MS.gene57322 | PPI |
| MS.gene46475 | MS.gene061807 | PPI |
| MS.gene28048 | MS.gene061807 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061807.t1 | MTR_8g089990 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 6.26e-161 | 443 |
| MS.gene061807.t1 | MTR_4g094260 | 72.222 | 198 | 49 | 3 | 22 | 216 | 5 | 199 | 9.32e-95 | 275 |
| MS.gene061807.t1 | MTR_1g073000 | 69.730 | 185 | 48 | 4 | 1 | 177 | 1 | 185 | 2.39e-87 | 256 |
| MS.gene061807.t1 | MTR_1g049070 | 60.150 | 133 | 47 | 2 | 83 | 215 | 24 | 150 | 1.52e-45 | 148 |
| MS.gene061807.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 124 | 265 | 6.61e-42 | 143 |
| MS.gene061807.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 133 | 274 | 7.99e-42 | 143 |
| MS.gene061807.t1 | MTR_3g028140 | 32.121 | 165 | 98 | 4 | 37 | 188 | 454 | 617 | 9.74e-17 | 78.6 |
| MS.gene061807.t1 | MTR_3g028140 | 36.154 | 130 | 74 | 4 | 37 | 158 | 454 | 582 | 4.54e-14 | 70.9 |
| MS.gene061807.t1 | MTR_8g037000 | 34.091 | 132 | 85 | 2 | 34 | 164 | 585 | 715 | 8.59e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061807.t1 | AT5G10350 | 79.358 | 218 | 40 | 2 | 1 | 215 | 1 | 216 | 1.07e-123 | 349 |
| MS.gene061807.t1 | AT5G65260 | 78.182 | 220 | 42 | 2 | 1 | 215 | 1 | 219 | 1.51e-122 | 346 |
| MS.gene061807.t1 | AT5G10350 | 78.922 | 204 | 38 | 2 | 1 | 201 | 1 | 202 | 5.43e-114 | 324 |
| MS.gene061807.t1 | AT5G51120 | 65.934 | 182 | 54 | 4 | 36 | 215 | 52 | 227 | 6.74e-81 | 241 |
| MS.gene061807.t1 | AT5G51120 | 54.338 | 219 | 56 | 4 | 36 | 215 | 52 | 265 | 6.12e-73 | 222 |
| MS.gene061807.t1 | AT5G51120 | 69.014 | 142 | 37 | 3 | 76 | 215 | 6 | 142 | 2.55e-64 | 196 |
| MS.gene061807.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene061807.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene061807.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene061807.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene061807.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 467 | 545 | 2.09e-12 | 65.9 |
| MS.gene061807.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 475 | 553 | 2.41e-12 | 65.9 |
Find 72 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTACTCCCCTTATGGATA+TGG | 0.236806 | 4.3:-10445808 | MS.gene061807:CDS |
| CCTTACATGTACTCCCCTTA+TGG | 0.286031 | 4.3:-10445814 | MS.gene061807:CDS |
| TGTTGAAACTGAAGCTGTTC+AGG | 0.288259 | 4.3:-10446083 | MS.gene061807:CDS |
| CCTTCCATCTCAGCCACGTC+TGG | 0.288464 | 4.3:+10450745 | None:intergenic |
| GCTAAGGTCGAGAAGGAAAT+TGG | 0.324391 | 4.3:-10450607 | MS.gene061807:CDS |
| GAAGAAGAGCATGAGGTTTA+CGG | 0.370305 | 4.3:-10450778 | MS.gene061807:CDS |
| GGACGATATTGTTTCATTCC+AGG | 0.377330 | 4.3:+10445889 | None:intergenic |
| CATATGAAAATCTAATAGTA+TGG | 0.377476 | 4.3:+10445616 | None:intergenic |
| CCTAAGAGGACCAATGTTCC+TGG | 0.382849 | 4.3:-10445907 | MS.gene061807:CDS |
| GCAATTCAGATTCAGATAAC+AGG | 0.397844 | 4.3:+10446053 | None:intergenic |
| CTTACATGGCATATGGCTTC+AGG | 0.398490 | 4.3:-10445852 | MS.gene061807:CDS |
| AGTCATGTGGTACAGTGAAC+AGG | 0.398603 | 4.3:-10446162 | MS.gene061807:CDS |
| TCCACATAAGCAAAACCTTT+AGG | 0.401589 | 4.3:+10446109 | None:intergenic |
| TTCAATCCTTACATGGCATA+TGG | 0.408319 | 4.3:-10445859 | MS.gene061807:CDS |
| AAGGAAATTGGCTCCGTTCA+AGG | 0.424617 | 4.3:-10450595 | MS.gene061807:intron |
| CCATAAGGGGAGTACATGTA+AGG | 0.425661 | 4.3:+10445814 | None:intergenic |
| TGCTTCTGTAGCTGCTTCTC+AGG | 0.427087 | 4.3:-10450149 | MS.gene061807:CDS |
| TAGTATGGCATGTAACGATT+TGG | 0.431577 | 4.3:+10445631 | None:intergenic |
| CCAGGAACATTGGTCCTCTT+AGG | 0.432535 | 4.3:+10445907 | None:intergenic |
| GTTTCCAGGTTCTGCCTAAG+AGG | 0.441058 | 4.3:-10445921 | MS.gene061807:intron |
| TGAGATGAGGCGCCGCTTGA+AGG | 0.443239 | 4.3:-10450668 | MS.gene061807:CDS |
| CTTCTTCCATTTCCTTCAAG+CGG | 0.444637 | 4.3:+10450656 | None:intergenic |
| AAGTGTTGCTGCACTTCCTC+TGG | 0.447138 | 4.3:+10446187 | None:intergenic |
| GAGGCGCCGCTTGAAGGAAA+TGG | 0.451064 | 4.3:-10450662 | MS.gene061807:CDS |
| ACTATCCTGACAGACAAGTT+TGG | 0.451284 | 4.3:-10446136 | MS.gene061807:CDS |
| CGATTTGGCCTTCTGTACCT+TGG | 0.467595 | 4.3:+10445646 | None:intergenic |
| CTGAAGCCATATGCCATGTA+AGG | 0.472571 | 4.3:+10445853 | None:intergenic |
| GACAAGTTTGGTCAGCCTAA+AGG | 0.475002 | 4.3:-10446124 | MS.gene061807:CDS |
| AATCCCAGACGTGGCTGAGA+TGG | 0.477332 | 4.3:-10450749 | MS.gene061807:CDS |
| CGATGAAGCCGGTGGTATGA+AGG | 0.484886 | 4.3:-10450698 | MS.gene061807:CDS |
| GCTGACCAAACTTGTCTGTC+AGG | 0.485268 | 4.3:+10446131 | None:intergenic |
| GAATGAAACAATATCGTCCT+AGG | 0.485505 | 4.3:-10445885 | MS.gene061807:CDS |
| TGTACTCCCCTTATGGATAT+GGG | 0.497226 | 4.3:-10445807 | MS.gene061807:intron |
| TTGCGTACCCATATCCATAA+GGG | 0.499244 | 4.3:+10445800 | None:intergenic |
| GTTGCGTACCCATATCCATA+AGG | 0.507988 | 4.3:+10445799 | None:intergenic |
| TGAGAAGCAGCTACAGAAGC+AGG | 0.509186 | 4.3:+10450151 | None:intergenic |
| ACCGGCTTCATCGTCGGCGG+CGG | 0.522837 | 4.3:+10450708 | None:intergenic |
| CTTCCATCTCAGCCACGTCT+GGG | 0.525363 | 4.3:+10450746 | None:intergenic |
| ATCGAGCTCCTTCATACCAC+CGG | 0.547125 | 4.3:+10450690 | None:intergenic |
| AGCTGCTTCTCAGGAAAACA+AGG | 0.560487 | 4.3:-10450140 | MS.gene061807:CDS |
| TTGTTTCATTCCAGGAACAT+TGG | 0.561559 | 4.3:+10445897 | None:intergenic |
| CATAAGGGGAGTACATGTAA+GGG | 0.562096 | 4.3:+10445815 | None:intergenic |
| GATGGATGAAGAAGAGCATG+AGG | 0.564377 | 4.3:-10450785 | MS.gene061807:CDS |
| TCCGCCGCCGACGATGAAGC+CGG | 0.571081 | 4.3:-10450709 | MS.gene061807:CDS |
| CATACCACCGGCTTCATCGT+CGG | 0.574346 | 4.3:+10450702 | None:intergenic |
| TTCTCAGGAAAACAAGGAGG+AGG | 0.576078 | 4.3:-10450134 | MS.gene061807:CDS |
| CCAGACGTGGCTGAGATGGA+AGG | 0.591120 | 4.3:-10450745 | MS.gene061807:CDS |
| AGCATGCATTTCACGAAGAG+CGG | 0.591158 | 4.3:+10450627 | None:intergenic |
| TCTTCGTGAAATGCATGCTA+AGG | 0.591257 | 4.3:-10450623 | MS.gene061807:CDS |
| TAGGCGATTCAATCCTTACA+TGG | 0.592543 | 4.3:-10445866 | MS.gene061807:CDS |
| GGAAGGCTCCAAGGTACAGA+AGG | 0.594290 | 4.3:-10445654 | MS.gene061807:CDS |
| ATGCATTTCACGAAGAGCGG+CGG | 0.600008 | 4.3:+10450630 | None:intergenic |
| ATCATTATGAAGACCTTGAA+CGG | 0.601110 | 4.3:+10450582 | None:intergenic |
| ACAAGGAGGAGGCAGATGCT+AGG | 0.602973 | 4.3:-10450123 | MS.gene061807:CDS |
| TTATCTGAATCTGAATTGCA+TGG | 0.610170 | 4.3:-10446049 | MS.gene061807:CDS |
| TGAAGGAGCTCGATGAGATG+AGG | 0.616758 | 4.3:-10450681 | MS.gene061807:CDS |
| CAAACTGCAGGAAGGCTCCA+AGG | 0.621276 | 4.3:-10445663 | MS.gene061807:intron |
| GTCATGTGGTACAGTGAACA+GGG | 0.623456 | 4.3:-10446161 | MS.gene061807:CDS |
| ATGTAAGGATTGAATCGCCT+AGG | 0.636374 | 4.3:+10445868 | None:intergenic |
| CAGCAACACTTTCAGTCATG+TGG | 0.638722 | 4.3:-10446175 | MS.gene061807:CDS |
| AATGCATGCTAAGGTCGAGA+AGG | 0.646081 | 4.3:-10450614 | MS.gene061807:CDS |
| CGGAGGAGAAATCCCAGACG+TGG | 0.649618 | 4.3:-10450758 | MS.gene061807:CDS |
| TGAAACTGAAGCTGTTCAGG+AGG | 0.649806 | 4.3:-10446080 | MS.gene061807:CDS |
| TGCGTACCCATATCCATAAG+GGG | 0.658223 | 4.3:+10445801 | None:intergenic |
| GCCGCCGACGATGAAGCCGG+TGG | 0.660392 | 4.3:-10450706 | MS.gene061807:CDS |
| ATAAGGGGAGTACATGTAAG+GGG | 0.666152 | 4.3:+10445816 | None:intergenic |
| ACCACCGGCTTCATCGTCGG+CGG | 0.666758 | 4.3:+10450705 | None:intergenic |
| TGATTATGCATGCACACCAG+AGG | 0.670537 | 4.3:-10446203 | MS.gene061807:CDS |
| GAAGAGCATGAGGTTTACGG+AGG | 0.680084 | 4.3:-10450775 | MS.gene061807:CDS |
| ACATGGCATATGGCTTCAGG+AGG | 0.690213 | 4.3:-10445849 | MS.gene061807:CDS |
| TGCTTCTCAGGAAAACAAGG+AGG | 0.704124 | 4.3:-10450137 | MS.gene061807:CDS |
| TAAGGGGAGTACATGTAAGG+GGG | 0.709420 | 4.3:+10445817 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAAAATTAAAATCAAA+AGG | - | chr4.3:10446538-10446557 | MS.gene061807:intron | 10.0% |
| !! | TCAAAAAATTAAAATCAAAA+GGG | - | chr4.3:10446539-10446558 | MS.gene061807:intron | 10.0% |
| !!! | ATTTTTTATTGTTTTTCAAT+CGG | - | chr4.3:10446350-10446369 | MS.gene061807:intron | 10.0% |
| !! | ACAATTATTAATTGTAAGTT+TGG | - | chr4.3:10447769-10447788 | MS.gene061807:intron | 15.0% |
| !! | ATATAAATACAACAGATATT+GGG | + | chr4.3:10446790-10446809 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTTTTGATGATG+AGG | + | chr4.3:10446534-10446553 | None:intergenic | 15.0% |
| !!! | CATTTATGATCTTTTTAATA+CGG | + | chr4.3:10449886-10449905 | None:intergenic | 15.0% |
| !!! | TATATTTTGCATTTTTCAAA+AGG | - | chr4.3:10449933-10449952 | MS.gene061807:intron | 15.0% |
| !!! | TGTCTTTAAAGTTTAAATTA+AGG | + | chr4.3:10447746-10447765 | None:intergenic | 15.0% |
| !!! | TTGTAAGATATTTTAGAAAT+GGG | + | chr4.3:10449363-10449382 | None:intergenic | 15.0% |
| !!! | TTTGTAAGATATTTTAGAAA+TGG | + | chr4.3:10449364-10449383 | None:intergenic | 15.0% |
| !!! | TTTTGTATGATAAATGAATT+GGG | - | chr4.3:10450107-10450126 | MS.gene061807:CDS | 15.0% |
| !!! | TTTTGTTGTTATTAAATTGT+GGG | + | chr4.3:10447394-10447413 | None:intergenic | 15.0% |
| !!! | TTTTTGTATGATAAATGAAT+TGG | - | chr4.3:10450106-10450125 | MS.gene061807:CDS | 15.0% |
| !! | AAAAACATACTTTCAATTGA+CGG | + | chr4.3:10450388-10450407 | None:intergenic | 20.0% |
| !! | AAAAATTAAAATCAAAAGGG+CGG | - | chr4.3:10446542-10446561 | MS.gene061807:intron | 20.0% |
| !! | AAAGAAATGAGAAAAGAAAA+AGG | - | chr4.3:10448990-10449009 | MS.gene061807:intron | 20.0% |
| !! | AAATTGATGAAATAGATAGT+AGG | - | chr4.3:10446650-10446669 | MS.gene061807:intron | 20.0% |
| !! | AGAAAGAACATTGAATAAAT+GGG | + | chr4.3:10447564-10447583 | None:intergenic | 20.0% |
| !! | ATACGCTATTTATTACAAAA+TGG | + | chr4.3:10447165-10447184 | None:intergenic | 20.0% |
| !! | ATTAAAGATAGCTTGATTAA+CGG | - | chr4.3:10446124-10446143 | MS.gene061807:CDS | 20.0% |
| !! | ATTAATCGAAAGATAGTATT+AGG | - | chr4.3:10447363-10447382 | MS.gene061807:intron | 20.0% |
| !! | GAATAGATAATGAAATAAGT+TGG | + | chr4.3:10449418-10449437 | None:intergenic | 20.0% |
| !! | GATATAAATACAACAGATAT+TGG | + | chr4.3:10446791-10446810 | None:intergenic | 20.0% |
| !! | TTTAATAACAACAAAAGTCA+CGG | - | chr4.3:10447398-10447417 | MS.gene061807:intron | 20.0% |
| !!! | AAACATTTCAGTTTTATTGA+TGG | - | chr4.3:10446034-10446053 | MS.gene061807:intron | 20.0% |
| !!! | AAACTGCTTTCTTTTAATAA+TGG | - | chr4.3:10447006-10447025 | MS.gene061807:intron | 20.0% |
| !!! | AAATCTGATTTGAGAAAAAA+AGG | + | chr4.3:10448521-10448540 | None:intergenic | 20.0% |
| !!! | ATATTTTAGAAATGGGAAAA+GGG | + | chr4.3:10449356-10449375 | None:intergenic | 20.0% |
| !!! | ATGAATTTTACAGTTCAAAA+TGG | - | chr4.3:10449777-10449796 | MS.gene061807:intron | 20.0% |
| !!! | ATTTGTAGTTTTTGATGATA+CGG | - | chr4.3:10450460-10450479 | MS.gene061807:intron | 20.0% |
| !!! | CTCTTTTTAACATTTTGATT+GGG | - | chr4.3:10446223-10446242 | MS.gene061807:intron | 20.0% |
| !!! | CTTTTGTTGTTATTAAATTG+TGG | + | chr4.3:10447395-10447414 | None:intergenic | 20.0% |
| !!! | GAAAAATAAAGAACATTTTG+AGG | - | chr4.3:10449012-10449031 | MS.gene061807:intron | 20.0% |
| !!! | GATTTTTAATAGTGTGATTA+TGG | - | chr4.3:10450075-10450094 | MS.gene061807:intron | 20.0% |
| !!! | TATTTAGAATTGACTTTTTG+TGG | - | chr4.3:10450708-10450727 | MS.gene061807:CDS | 20.0% |
| !!! | TCTCTTTTTAACATTTTGAT+TGG | - | chr4.3:10446222-10446241 | MS.gene061807:intron | 20.0% |
| !!! | TGAATTTTACAGTTCAAAAT+GGG | - | chr4.3:10449778-10449797 | MS.gene061807:intron | 20.0% |
| !!! | TTTGTTTTTTGTTTTCAGAT+AGG | + | chr4.3:10447511-10447530 | None:intergenic | 20.0% |
| ! | AAAGTGTACAAAGTTTATGA+AGG | + | chr4.3:10449452-10449471 | None:intergenic | 25.0% |
| ! | AAGTAAAAACAAGAAAGTCA+AGG | - | chr4.3:10447808-10447827 | MS.gene061807:intron | 25.0% |
| ! | AATTATGAGATAAAGACCAA+AGG | + | chr4.3:10449281-10449300 | None:intergenic | 25.0% |
| ! | AATTTGTATACAACGGATAT+TGG | + | chr4.3:10446762-10446781 | None:intergenic | 25.0% |
| ! | AGACAGAACATTGAATAAAT+GGG | + | chr4.3:10446967-10446986 | None:intergenic | 25.0% |
| ! | AGCATACAGAAATTTAAATG+AGG | + | chr4.3:10450641-10450660 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGACCAAA+GGG | + | chr4.3:10449280-10449299 | None:intergenic | 25.0% |
| ! | ATTTGTATACAACGGATATT+GGG | + | chr4.3:10446761-10446780 | None:intergenic | 25.0% |
| ! | CAGAAAGAACATTGAATAAA+TGG | + | chr4.3:10447565-10447584 | None:intergenic | 25.0% |
| ! | GGTGAAAAATTTGTATACAA+CGG | + | chr4.3:10446769-10446788 | None:intergenic | 25.0% |
| ! | TAGTTCGTAATAACTAAATC+AGG | + | chr4.3:10446472-10446491 | None:intergenic | 25.0% |
| ! | TATATATATACTGCAGTATG+CGG | - | chr4.3:10447295-10447314 | MS.gene061807:intron | 25.0% |
| ! | TATTTACCTAATCAACGTAA+AGG | - | chr4.3:10446440-10446459 | MS.gene061807:intron | 25.0% |
| ! | TCATAAACTTTGTACACTTT+AGG | - | chr4.3:10449452-10449471 | MS.gene061807:intron | 25.0% |
| ! | TCTAAATAACAATTGAGCTT+TGG | + | chr4.3:10450696-10450715 | None:intergenic | 25.0% |
| ! | TGTTGTTATGAAATTTAGTG+AGG | - | chr4.3:10448808-10448827 | MS.gene061807:intron | 25.0% |
| ! | TTCATATCCAACTAAACAAT+AGG | + | chr4.3:10446410-10446429 | None:intergenic | 25.0% |
| ! | TTGTAATAAATAGCGTATCA+CGG | - | chr4.3:10447167-10447186 | MS.gene061807:intron | 25.0% |
| !! | ATGTTAACATTGTATTTTGC+GGG | - | chr4.3:10448733-10448752 | MS.gene061807:intron | 25.0% |
| !! | GATGTTAACATTGTATTTTG+CGG | - | chr4.3:10448732-10448751 | MS.gene061807:intron | 25.0% |
| !! | GATTCGAGTTAATTCAATTA+AGG | + | chr4.3:10445912-10445931 | None:intergenic | 25.0% |
| !! | TATAGGCAAACTTCTTTTTA+TGG | - | chr4.3:10449638-10449657 | MS.gene061807:intron | 25.0% |
| !! | TCAAATCAGATTTGTTTCAA+TGG | - | chr4.3:10448528-10448547 | MS.gene061807:intron | 25.0% |
| !! | TGTTTTCACGTTTATGAATT+AGG | - | chr4.3:10449300-10449319 | MS.gene061807:intron | 25.0% |
| !!! | CTGTACAGTTTTTTTTTGTT+TGG | - | chr4.3:10448614-10448633 | MS.gene061807:intron | 25.0% |
| !!! | GATATTTTAGAAATGGGAAA+AGG | + | chr4.3:10449357-10449376 | None:intergenic | 25.0% |
| !!! | GGAAATATAATTTTGAAGCT+AGG | + | chr4.3:10446157-10446176 | None:intergenic | 25.0% |
| !!! | TTCCTGATATTTTTTTGTTG+AGG | - | chr4.3:10449324-10449343 | MS.gene061807:intron | 25.0% |
| AAATAGTAGTATGTGTGAGA+AGG | - | chr4.3:10449560-10449579 | MS.gene061807:intron | 30.0% | |
| AAATCACATGGGTACAATAT+TGG | + | chr4.3:10448195-10448214 | None:intergenic | 30.0% | |
| AACATGTTCACCTATAGATA+CGG | + | chr4.3:10447538-10447557 | None:intergenic | 30.0% | |
| AACTGACGATATAGATGATA+TGG | - | chr4.3:10449960-10449979 | MS.gene061807:intron | 30.0% | |
| AATCATGGATCACAAAAAAG+TGG | - | chr4.3:10447085-10447104 | MS.gene061807:intron | 30.0% | |
| ACCAGAATAGAATAATTACG+TGG | + | chr4.3:10448253-10448272 | None:intergenic | 30.0% | |
| ACGAACTAATTTAGTAGTCT+TGG | - | chr4.3:10446484-10446503 | MS.gene061807:intron | 30.0% | |
| AGAAAGTCAAGGATCATAAA+AGG | - | chr4.3:10447819-10447838 | MS.gene061807:intron | 30.0% | |
| AGCCTCAACAAAAAAATATC+AGG | + | chr4.3:10449329-10449348 | None:intergenic | 30.0% | |
| AGGGAAAAATGGCTAAATAA+TGG | + | chr4.3:10446921-10446940 | None:intergenic | 30.0% | |
| ATCATTATGAAGACCTTGAA+CGG | + | chr4.3:10445832-10445851 | None:intergenic | 30.0% | |
| ATGAAATAGATAGTAGGCAA+TGG | - | chr4.3:10446656-10446675 | MS.gene061807:intron | 30.0% | |
| ATTTACTTTGTATGATGTCG+CGG | + | chr4.3:10446178-10446197 | None:intergenic | 30.0% | |
| CAAGAATTGCAAAATCACAT+GGG | + | chr4.3:10448206-10448225 | None:intergenic | 30.0% | |
| CAGACAGAACATTGAATAAA+TGG | + | chr4.3:10446968-10446987 | None:intergenic | 30.0% | |
| CATGCTTGCTTATAGATAAA+TGG | + | chr4.3:10447938-10447957 | None:intergenic | 30.0% | |
| CATTTATCTATAAGCAAGCA+TGG | - | chr4.3:10447936-10447955 | MS.gene061807:intron | 30.0% | |
| CATTTGTAACTATTCATGGT+GGG | - | chr4.3:10448446-10448465 | MS.gene061807:intron | 30.0% | |
| CGATTAATAATTATGAGTGC+AGG | + | chr4.3:10447351-10447370 | None:intergenic | 30.0% | |
| GAAAGTCAAGGATCATAAAA+GGG | - | chr4.3:10447820-10447839 | MS.gene061807:intron | 30.0% | |
| GTAAAAGTTAGATGCTGAAT+TGG | + | chr4.3:10445959-10445978 | None:intergenic | 30.0% | |
| TACATACATGTAGAGTGATT+AGG | + | chr4.3:10446595-10446614 | None:intergenic | 30.0% | |
| TAGAATAATTACGTGGAACA+AGG | + | chr4.3:10448246-10448265 | None:intergenic | 30.0% | |
| TCAAGAATTGCAAAATCACA+TGG | + | chr4.3:10448207-10448226 | None:intergenic | 30.0% | |
| TCATGGCTAATTTAAACTCA+AGG | + | chr4.3:10450427-10450446 | None:intergenic | 30.0% | |
| TCCACGTAATTATTCTATTC+TGG | - | chr4.3:10448249-10448268 | MS.gene061807:intron | 30.0% | |
| TGAAGACACATGAATTTCAA+GGG | + | chr4.3:10450185-10450204 | None:intergenic | 30.0% | |
| TGTTGTGAATTACTACTATG+AGG | - | chr4.3:10449529-10449548 | MS.gene061807:intron | 30.0% | |
| TTATCTGAATCTGAATTGCA+TGG | - | chr4.3:10450362-10450381 | MS.gene061807:intron | 30.0% | |
| TTTGCATCCTATTGTTTAGT+TGG | - | chr4.3:10446400-10446419 | MS.gene061807:intron | 30.0% | |
| ! | AAATTTAGTGAGGTATCACA+CGG | - | chr4.3:10448818-10448837 | MS.gene061807:intron | 30.0% |
| ! | CAAACTTCTTTTTATGGAGT+TGG | - | chr4.3:10449644-10449663 | MS.gene061807:intron | 30.0% |
| ! | GAAGCATTTGTAACTATTCA+TGG | - | chr4.3:10448442-10448461 | MS.gene061807:intron | 30.0% |
| ! | GATTTGTTTCAATGGATTTC+AGG | - | chr4.3:10448536-10448555 | MS.gene061807:intron | 30.0% |
| ! | TGAGTATATTGATAACAGGA+CGG | + | chr4.3:10448171-10448190 | None:intergenic | 30.0% |
| ! | TGGTTGAGTATATTGATAAC+AGG | + | chr4.3:10448175-10448194 | None:intergenic | 30.0% |
| !!! | GCTTGATTTGGTTTTATTGT+TGG | - | chr4.3:10449666-10449685 | MS.gene061807:intron | 30.0% |
| !!! | TGATTTGGTTTTATTGTTGG+TGG | - | chr4.3:10449669-10449688 | MS.gene061807:intron | 30.0% |
| !!! | TTTTTTAGGCTCATAGTAGA+GGG | - | chr4.3:10448769-10448788 | MS.gene061807:intron | 30.0% |
| AAAAGTCACGGATCATAAAG+GGG | - | chr4.3:10447410-10447429 | MS.gene061807:intron | 35.0% | |
| AAAATTTGTATGCCACGTAG+AGG | + | chr4.3:10446735-10446754 | None:intergenic | 35.0% | |
| AACAAACCAACCGTATCTAT+AGG | - | chr4.3:10447525-10447544 | MS.gene061807:intron | 35.0% | |
| AATGTTCTTTCTGTCAAACC+AGG | - | chr4.3:10447572-10447591 | MS.gene061807:intron | 35.0% | |
| AATTACGTGGAACAAGGAAA+AGG | + | chr4.3:10448240-10448259 | None:intergenic | 35.0% | |
| ACAAAAGTCACGGATCATAA+AGG | - | chr4.3:10447408-10447427 | MS.gene061807:intron | 35.0% | |
| ACTAACAATCTTCAGAGACA+GGG | - | chr4.3:10448644-10448663 | MS.gene061807:intron | 35.0% | |
| AGATGATTCAACTTCACAAC+TGG | - | chr4.3:10449101-10449120 | MS.gene061807:intron | 35.0% | |
| ATCAGAACACAACTGTCATT+TGG | + | chr4.3:10448056-10448075 | None:intergenic | 35.0% | |
| ATGAGTGAAATGCACAATGA+AGG | - | chr4.3:10449611-10449630 | MS.gene061807:intron | 35.0% | |
| ATGTTCTTTCTGTCAAACCA+GGG | - | chr4.3:10447573-10447592 | MS.gene061807:intron | 35.0% | |
| ATTACGTGGAACAAGGAAAA+GGG | + | chr4.3:10448239-10448258 | None:intergenic | 35.0% | |
| ATTAGTTCACACACGCTATT+AGG | - | chr4.3:10448404-10448423 | MS.gene061807:intron | 35.0% | |
| CAAAAGTCACGGATCATAAA+GGG | - | chr4.3:10447409-10447428 | MS.gene061807:intron | 35.0% | |
| CCTAATCAACGTAAAGGATA+AGG | - | chr4.3:10446446-10446465 | MS.gene061807:intron | 35.0% | |
| CTGAAGACACATGAATTTCA+AGG | + | chr4.3:10450186-10450205 | None:intergenic | 35.0% | |
| CTGATGTGTGAAATAAGGAT+TGG | - | chr4.3:10448071-10448090 | MS.gene061807:intron | 35.0% | |
| CTTGAAATTCATGTGTCTTC+AGG | - | chr4.3:10450184-10450203 | MS.gene061807:intron | 35.0% | |
| GAATGAAACAATATCGTCCT+AGG | - | chr4.3:10450526-10450545 | MS.gene061807:intron | 35.0% | |
| GACGACAAAAAAGAACAAGT+TGG | + | chr4.3:10446698-10446717 | None:intergenic | 35.0% | |
| GAGATCAATGTTGTCAATCA+TGG | - | chr4.3:10447070-10447089 | MS.gene061807:intron | 35.0% | |
| GCAATTCAGATTCAGATAAC+AGG | + | chr4.3:10450361-10450380 | None:intergenic | 35.0% | |
| GCATTTGTAACTATTCATGG+TGG | - | chr4.3:10448445-10448464 | MS.gene061807:intron | 35.0% | |
| GTATCTATAGGTGAACATGT+TGG | - | chr4.3:10447537-10447556 | MS.gene061807:intron | 35.0% | |
| GTGTTCTGATGTGTGAAATA+AGG | - | chr4.3:10448066-10448085 | MS.gene061807:intron | 35.0% | |
| GTTAATCACGACGATAATCA+TGG | + | chr4.3:10446001-10446020 | None:intergenic | 35.0% | |
| TAACATCCAGCGCTAATTAT+AGG | + | chr4.3:10448719-10448738 | None:intergenic | 35.0% | |
| TACAAGTCACCTAAAGAATG+AGG | + | chr4.3:10449490-10449509 | None:intergenic | 35.0% | |
| TACTAACAATCTTCAGAGAC+AGG | - | chr4.3:10448643-10448662 | MS.gene061807:intron | 35.0% | |
| TAGTATGGCATGTAACGATT+TGG | + | chr4.3:10450783-10450802 | None:intergenic | 35.0% | |
| TATATGCAAGACTCATGTCT+CGG | + | chr4.3:10450050-10450069 | None:intergenic | 35.0% | |
| TCCACATAAGCAAAACCTTT+AGG | + | chr4.3:10450305-10450324 | None:intergenic | 35.0% | |
| TGCAATCTTCCTCATTCTTT+AGG | - | chr4.3:10449478-10449497 | MS.gene061807:intron | 35.0% | |
| TGTCTCTTAACTCCATTATG+TGG | - | chr4.3:10446852-10446871 | MS.gene061807:intron | 35.0% | |
| TGTGAATTACTACTATGAGG+AGG | - | chr4.3:10449532-10449551 | MS.gene061807:intron | 35.0% | |
| TTCAATCCTTACATGGCATA+TGG | - | chr4.3:10450552-10450571 | MS.gene061807:intron | 35.0% | |
| TTGTTTCATTCCAGGAACAT+TGG | + | chr4.3:10450517-10450536 | None:intergenic | 35.0% | |
| ! | ATAATGGAGTTAAGAGACAG+AGG | + | chr4.3:10446851-10446870 | None:intergenic | 35.0% |
| ! | CCTTATCCTTTACGTTGATT+AGG | + | chr4.3:10446449-10446468 | None:intergenic | 35.0% |
| ! | GAATGTCGTCTTTGAAAAGT+AGG | - | chr4.3:10447471-10447490 | MS.gene061807:intron | 35.0% |
| ! | GTGCATTTCACTCATTTTAC+AGG | + | chr4.3:10449606-10449625 | None:intergenic | 35.0% |
| ! | TAACATTGTATTTTGCGGGT+GGG | - | chr4.3:10448737-10448756 | MS.gene061807:intron | 35.0% |
| ! | TTAACATTGTATTTTGCGGG+TGG | - | chr4.3:10448736-10448755 | MS.gene061807:intron | 35.0% |
| !! | CATTTTGAGGAAACTGTGAA+TGG | - | chr4.3:10449025-10449044 | MS.gene061807:intron | 35.0% |
| !! | GAATAAATGGGCTGAAACTA+AGG | + | chr4.3:10446955-10446974 | None:intergenic | 35.0% |
| !! | GACGTCTTTCAATTTTGAAG+CGG | + | chr4.3:10447861-10447880 | None:intergenic | 35.0% |
| !! | TTGTTTTTCAATCGGAACCA+TGG | - | chr4.3:10446358-10446377 | MS.gene061807:intron | 35.0% |
| !! | TTTATGGAGTTGGCTTGATT+TGG | - | chr4.3:10449654-10449673 | MS.gene061807:intron | 35.0% |
| !! | TTTTTAGGCTCATAGTAGAG+GGG | - | chr4.3:10448770-10448789 | MS.gene061807:intron | 35.0% |
| !!! | GTTGTTTTTTGCTTTCAGAG+AGG | + | chr4.3:10447911-10447930 | None:intergenic | 35.0% |
| !!! | GTTTTTTAGGCTCATAGTAG+AGG | - | chr4.3:10448768-10448787 | MS.gene061807:intron | 35.0% |
| AAAGTCACGGATCATAAAGG+GGG | - | chr4.3:10447411-10447430 | MS.gene061807:intron | 40.0% | |
| AAATTCACTAGACGAGCTCA+TGG | + | chr4.3:10450444-10450463 | None:intergenic | 40.0% | |
| AATGTTCTGTCTGTCAAACC+AGG | - | chr4.3:10446975-10446994 | MS.gene061807:intron | 40.0% | |
| ACAACAGTACCAACCTTATC+AGG | + | chr4.3:10449515-10449534 | None:intergenic | 40.0% | |
| ACATCCTCACAAATTCAGAG+AGG | + | chr4.3:10448019-10448038 | None:intergenic | 40.0% | |
| ACCTAGTTGCAGTCAACAAA+AGG | + | chr4.3:10449198-10449217 | None:intergenic | 40.0% | |
| ACTATCCTGACAGACAAGTT+TGG | - | chr4.3:10450275-10450294 | MS.gene061807:intron | 40.0% | |
| ACTTGTAGACCTGATAAGGT+TGG | - | chr4.3:10449503-10449522 | MS.gene061807:intron | 40.0% | |
| AGGCTTATGTGGCATTCATT+TGG | + | chr4.3:10446831-10446850 | None:intergenic | 40.0% | |
| ATATATACTGCAGTATGCGG+AGG | - | chr4.3:10447298-10447317 | MS.gene061807:intron | 40.0% | |
| ATATGTCTCACTATGATCGC+AGG | - | chr4.3:10448673-10448692 | MS.gene061807:intron | 40.0% | |
| ATGAGCCTAAAAAACACCAG+TGG | + | chr4.3:10448763-10448782 | None:intergenic | 40.0% | |
| ATGGTATCAAATAGCAGCTG+TGG | + | chr4.3:10447146-10447165 | None:intergenic | 40.0% | |
| ATGTAAGGATTGAATCGCCT+AGG | + | chr4.3:10450546-10450565 | None:intergenic | 40.0% | |
| ATGTACTCCCCTTATGGATA+TGG | - | chr4.3:10450603-10450622 | MS.gene061807:CDS | 40.0% | |
| ATGTTCTGTCTGTCAAACCA+GGG | - | chr4.3:10446976-10446995 | MS.gene061807:intron | 40.0% | |
| ATTTATCCTGTTGAGTGCAG+AGG | - | chr4.3:10447694-10447713 | MS.gene061807:intron | 40.0% | |
| CAGAAACTGAGTCCACATAA+TGG | + | chr4.3:10446867-10446886 | None:intergenic | 40.0% | |
| CTGAATTGGATTGCATGCAA+TGG | + | chr4.3:10445945-10445964 | None:intergenic | 40.0% | |
| CTTCTTCCATTTCCTTCAAG+CGG | + | chr4.3:10445758-10445777 | None:intergenic | 40.0% | |
| GACTTCACAATGACTTTGCA+GGG | - | chr4.3:10449802-10449821 | MS.gene061807:intron | 40.0% | |
| GATACGGATGTTATGTTTCC+AGG | - | chr4.3:10450476-10450495 | MS.gene061807:intron | 40.0% | |
| GGACGATATTGTTTCATTCC+AGG | + | chr4.3:10450525-10450544 | None:intergenic | 40.0% | |
| GGCATTCATTTGGTCTAACA+CGG | + | chr4.3:10446821-10446840 | None:intergenic | 40.0% | |
| GGGGGAAAATTCAGAATTAG+TGG | - | chr4.3:10447429-10447448 | MS.gene061807:intron | 40.0% | |
| GTGAAATGCACAATGAAGGA+TGG | - | chr4.3:10449615-10449634 | MS.gene061807:intron | 40.0% | |
| GTGGGAACATTAGGAATTTG+AGG | - | chr4.3:10448464-10448483 | MS.gene061807:intron | 40.0% | |
| GTTACCTCTCTGAATTTGTG+AGG | - | chr4.3:10448012-10448031 | MS.gene061807:intron | 40.0% | |
| TAGGCGATTCAATCCTTACA+TGG | - | chr4.3:10450545-10450564 | MS.gene061807:intron | 40.0% | |
| TATGTCTCACTATGATCGCA+GGG | - | chr4.3:10448674-10448693 | MS.gene061807:intron | 40.0% | |
| TCTTCGTGAAATGCATGCTA+AGG | - | chr4.3:10445788-10445807 | MS.gene061807:intron | 40.0% | |
| TGACTTCACAATGACTTTGC+AGG | - | chr4.3:10449801-10449820 | MS.gene061807:intron | 40.0% | |
| TGATTCAACTTCACAACTGG+AGG | - | chr4.3:10449104-10449123 | MS.gene061807:intron | 40.0% | |
| TGCACAATGAAGGATGGTAT+AGG | - | chr4.3:10449621-10449640 | MS.gene061807:intron | 40.0% | |
| TGCATGCAATGGAGTTGAAT+CGG | + | chr4.3:10445934-10445953 | None:intergenic | 40.0% | |
| TGTACTCCCCTTATGGATAT+GGG | - | chr4.3:10450604-10450623 | MS.gene061807:CDS | 40.0% | |
| TGTTCACCTATAGATACGGT+TGG | + | chr4.3:10447534-10447553 | None:intergenic | 40.0% | |
| TGTTCTTTCTGTCAAACCAG+GGG | - | chr4.3:10447574-10447593 | MS.gene061807:intron | 40.0% | |
| TGTTGAAACTGAAGCTGTTC+AGG | - | chr4.3:10450328-10450347 | MS.gene061807:intron | 40.0% | |
| TTAAGAGACAGAGGCTTATG+TGG | + | chr4.3:10446842-10446861 | None:intergenic | 40.0% | |
| TTGCGTACCCATATCCATAA+GGG | + | chr4.3:10450614-10450633 | None:intergenic | 40.0% | |
| TTTATACCTCTGCACTCAAC+AGG | + | chr4.3:10447703-10447722 | None:intergenic | 40.0% | |
| ! | AAAAGAACAAGTTGGAAGCG+AGG | + | chr4.3:10446690-10446709 | None:intergenic | 40.0% |
| ! | ACTGTCATTTGGTCTCTGTT+CGG | + | chr4.3:10448045-10448064 | None:intergenic | 40.0% |
| ! | ATAAGGGGAGTACATGTAAG+GGG | + | chr4.3:10450598-10450617 | None:intergenic | 40.0% |
| ! | CATAAGGGGAGTACATGTAA+GGG | + | chr4.3:10450599-10450618 | None:intergenic | 40.0% |
| ! | CTATTCATGGTGGGAACATT+AGG | - | chr4.3:10448455-10448474 | MS.gene061807:intron | 40.0% |
| ! | GAAGAAGAGCATGAGGTTTA+CGG | - | chr4.3:10445633-10445652 | MS.gene061807:CDS | 40.0% |
| ! | GCCTAAAGGTTTTGCTTATG+TGG | - | chr4.3:10450301-10450320 | MS.gene061807:intron | 40.0% |
| ! | TAGGAATTTGAGGCCTTCAT+TGG | - | chr4.3:10448474-10448493 | MS.gene061807:intron | 40.0% |
| ! | TCAGAATGCTGTGAGTTTTC+TGG | - | chr4.3:10448106-10448125 | MS.gene061807:intron | 40.0% |
| ! | TGTGTGAAATAAGGATTGGC+TGG | - | chr4.3:10448075-10448094 | MS.gene061807:intron | 40.0% |
| ! | TTTTAGGCTCATAGTAGAGG+GGG | - | chr4.3:10448771-10448790 | MS.gene061807:intron | 40.0% |
| ! | TTTTTCGTCAAACTGCAGGA+AGG | - | chr4.3:10450740-10450759 | MS.gene061807:CDS | 40.0% |
| !! | ATGCTCTAAGAGAGTTGGTT+TGG | - | chr4.3:10448131-10448150 | MS.gene061807:intron | 40.0% |
| !! | TCCTTTTGTTGACTGCAACT+AGG | - | chr4.3:10449194-10449213 | MS.gene061807:intron | 40.0% |
| !! | TCTGTTTTTCGTCAAACTGC+AGG | - | chr4.3:10450736-10450755 | MS.gene061807:CDS | 40.0% |
| !! | TGGAAATGCTCTAAGAGAGT+TGG | - | chr4.3:10448126-10448145 | MS.gene061807:intron | 40.0% |
| !!! | GAATTGGGTTTTAGCTCATC+TGG | - | chr4.3:10450122-10450141 | MS.gene061807:CDS | 40.0% |
| !!! | GATGCTAGGTCTGTTTTTGT+CGG | - | chr4.3:10446302-10446321 | MS.gene061807:intron | 40.0% |
| !!! | GTTTTATTGTTGGTGGCTTG+TGG | - | chr4.3:10449676-10449695 | MS.gene061807:intron | 40.0% |
| AAAATCAAAAGGGCGGCAGT+TGG | - | chr4.3:10446549-10446568 | MS.gene061807:intron | 45.0% | |
| AATGCATGCTAAGGTCGAGA+AGG | - | chr4.3:10445797-10445816 | MS.gene061807:intron | 45.0% | |
| ACGTGTCCTATAATTAGCGC+TGG | - | chr4.3:10448710-10448729 | MS.gene061807:intron | 45.0% | |
| AGCATGCATTTCACGAAGAG+CGG | + | chr4.3:10445787-10445806 | None:intergenic | 45.0% | |
| AGCTGCTTCTCAGGAAAACA+AGG | - | chr4.3:10446271-10446290 | MS.gene061807:intron | 45.0% | |
| AGTCATGTGGTACAGTGAAC+AGG | - | chr4.3:10450249-10450268 | MS.gene061807:intron | 45.0% | |
| AGTTTCTGCCATGCTCATGA+GGG | + | chr4.3:10449054-10449073 | None:intergenic | 45.0% | |
| ATTTGGTCTAACACGGTGAC+AGG | + | chr4.3:10446814-10446833 | None:intergenic | 45.0% | |
| CAGCAACACTTTCAGTCATG+TGG | - | chr4.3:10450236-10450255 | MS.gene061807:intron | 45.0% | |
| CCTTACATGTACTCCCCTTA+TGG | - | chr4.3:10450597-10450616 | MS.gene061807:CDS | 45.0% | |
| CTGAAGCCATATGCCATGTA+AGG | + | chr4.3:10450561-10450580 | None:intergenic | 45.0% | |
| CTTACATGGCATATGGCTTC+AGG | - | chr4.3:10450559-10450578 | MS.gene061807:intron | 45.0% | |
| GACAAGTTTGGTCAGCCTAA+AGG | - | chr4.3:10450287-10450306 | MS.gene061807:intron | 45.0% | |
| GACACTCGCTATAGCATAGA+CGG | + | chr4.3:10447122-10447141 | None:intergenic | 45.0% | |
| GATCTCAAAGCTGCTATTGC+AGG | - | chr4.3:10447658-10447677 | MS.gene061807:intron | 45.0% | |
| GCAGAAACTAGTACAGCTGA+AGG | - | chr4.3:10449065-10449084 | MS.gene061807:intron | 45.0% | |
| GCTAAGGTCGAGAAGGAAAT+TGG | - | chr4.3:10445804-10445823 | MS.gene061807:intron | 45.0% | |
| GGATGCAAACATGCACGTAA+AGG | + | chr4.3:10446389-10446408 | None:intergenic | 45.0% | |
| GTCATGTGGTACAGTGAACA+GGG | - | chr4.3:10450250-10450269 | MS.gene061807:intron | 45.0% | |
| GTTGCGTACCCATATCCATA+AGG | + | chr4.3:10450615-10450634 | None:intergenic | 45.0% | |
| TAGTTTCTGCCATGCTCATG+AGG | + | chr4.3:10449055-10449074 | None:intergenic | 45.0% | |
| TGAAACTGAAGCTGTTCAGG+AGG | - | chr4.3:10450331-10450350 | MS.gene061807:intron | 45.0% | |
| TGATTATGCATGCACACCAG+AGG | - | chr4.3:10450208-10450227 | MS.gene061807:intron | 45.0% | |
| TGCAAACATGCACGTAAAGG+AGG | + | chr4.3:10446386-10446405 | None:intergenic | 45.0% | |
| TGCGTACCCATATCCATAAG+GGG | + | chr4.3:10450613-10450632 | None:intergenic | 45.0% | |
| TGCTTCTCAGGAAAACAAGG+AGG | - | chr4.3:10446274-10446293 | MS.gene061807:intron | 45.0% | |
| TGTTCTGTCTGTCAAACCAG+GGG | - | chr4.3:10446977-10446996 | MS.gene061807:intron | 45.0% | |
| TTCTCAGGAAAACAAGGAGG+AGG | - | chr4.3:10446277-10446296 | MS.gene061807:intron | 45.0% | |
| TTGGGCAAATGACACAGTAG+AGG | + | chr4.3:10449229-10449248 | None:intergenic | 45.0% | |
| TTTGGTCTAACACGGTGACA+GGG | + | chr4.3:10446813-10446832 | None:intergenic | 45.0% | |
| ! | AAGGAAATTGGCTCCGTTCA+AGG | - | chr4.3:10445816-10445835 | MS.gene061807:CDS | 45.0% |
| ! | AGGCTTTTCTCAAACTCCAC+AGG | + | chr4.3:10449586-10449605 | None:intergenic | 45.0% |
| ! | ATGCGGAGGTATAAATGCTC+AGG | - | chr4.3:10447312-10447331 | MS.gene061807:intron | 45.0% |
| ! | CCATAAGGGGAGTACATGTA+AGG | + | chr4.3:10450600-10450619 | None:intergenic | 45.0% |
| ! | GAGACAGCTTGTGGTTCTTT+TGG | - | chr4.3:10449126-10449145 | MS.gene061807:intron | 45.0% |
| ! | GGTGACTTGTAGACCTGATA+AGG | - | chr4.3:10449499-10449518 | MS.gene061807:intron | 45.0% |
| ! | TAAGGGGAGTACATGTAAGG+GGG | + | chr4.3:10450597-10450616 | None:intergenic | 45.0% |
| ! | TACATGTAAGGGGGAGCATA+AGG | + | chr4.3:10450588-10450607 | None:intergenic | 45.0% |
| ! | TTTAGTGAGGTATCACACGG+AGG | - | chr4.3:10448821-10448840 | MS.gene061807:intron | 45.0% |
| !! | ATAGCAGCTTTGAGATCAGC+TGG | + | chr4.3:10447655-10447674 | None:intergenic | 45.0% |
| !! | CCATTTTTCCCTCTTAGACC+GGG | - | chr4.3:10446929-10446948 | MS.gene061807:intron | 45.0% |
| !! | TAGCAGCTTTGAGATCAGCT+GGG | + | chr4.3:10447654-10447673 | None:intergenic | 45.0% |
| !!! | GCCATTTTTCCCTCTTAGAC+CGG | - | chr4.3:10446928-10446947 | MS.gene061807:intron | 45.0% |
| AAACCAGGGGTCGCAGAATT+TGG | - | chr4.3:10447587-10447606 | MS.gene061807:intron | 50.0% | |
| AAACTAAGGCCCGGTCTAAG+AGG | + | chr4.3:10446941-10446960 | None:intergenic | 50.0% | |
| AACAACAGCTGCACACCCTT+TGG | + | chr4.3:10449256-10449275 | None:intergenic | 50.0% | |
| AACCAGGGGTCGCAGAATTT+GGG | - | chr4.3:10447588-10447607 | MS.gene061807:intron | 50.0% | |
| AACTAAGGCCCGGTCTAAGA+GGG | + | chr4.3:10446940-10446959 | None:intergenic | 50.0% | |
| AATGGCATCCCTCATGAGCA+TGG | - | chr4.3:10449043-10449062 | MS.gene061807:intron | 50.0% | |
| ACATGGCATATGGCTTCAGG+AGG | - | chr4.3:10450562-10450581 | MS.gene061807:intron | 50.0% | |
| AGTATGTGTGAGAAGGCCTG+TGG | - | chr4.3:10449567-10449586 | MS.gene061807:intron | 50.0% | |
| ATCGAGCTCCTTCATACCAC+CGG | + | chr4.3:10445724-10445743 | None:intergenic | 50.0% | |
| ATGCATTTCACGAAGAGCGG+CGG | + | chr4.3:10445784-10445803 | None:intergenic | 50.0% | |
| ATTCCACAACGCTGTAGTGC+TGG | - | chr4.3:10447210-10447229 | MS.gene061807:intron | 50.0% | |
| CATTTGCCCAACGTGCCAAA+GGG | - | chr4.3:10449238-10449257 | MS.gene061807:intron | 50.0% | |
| CCAGGAACATTGGTCCTCTT+AGG | + | chr4.3:10450507-10450526 | None:intergenic | 50.0% | |
| CCCGGTCTAAGAGGGAAAAA+TGG | + | chr4.3:10446932-10446951 | None:intergenic | 50.0% | |
| CCTAAGAGGACCAATGTTCC+TGG | - | chr4.3:10450504-10450523 | MS.gene061807:intron | 50.0% | |
| CGCATTTACTGTCCTCTACG+TGG | - | chr4.3:10446720-10446739 | MS.gene061807:intron | 50.0% | |
| GATTTCAGGCTGAGCTGCAT+AGG | - | chr4.3:10448550-10448569 | MS.gene061807:intron | 50.0% | |
| GCTGACCAAACTTGTCTGTC+AGG | + | chr4.3:10450283-10450302 | None:intergenic | 50.0% | |
| GTTGACTGCAACTAGGTCAG+TGG | - | chr4.3:10449201-10449220 | MS.gene061807:intron | 50.0% | |
| GTTTCCAGGTTCTGCCTAAG+AGG | - | chr4.3:10450490-10450509 | MS.gene061807:intron | 50.0% | |
| TCATTTGCCCAACGTGCCAA+AGG | - | chr4.3:10449237-10449256 | MS.gene061807:intron | 50.0% | |
| TCTCCGCTCACAACCAATGA+AGG | + | chr4.3:10448490-10448509 | None:intergenic | 50.0% | |
| TGAAGGAGCTCGATGAGATG+AGG | - | chr4.3:10445730-10445749 | MS.gene061807:intron | 50.0% | |
| TGAGAAGCAGCTACAGAAGC+AGG | + | chr4.3:10446263-10446282 | None:intergenic | 50.0% | |
| TGCACGTAAAGGAGGAACCA+TGG | + | chr4.3:10446378-10446397 | None:intergenic | 50.0% | |
| TGCTTCTGTAGCTGCTTCTC+AGG | - | chr4.3:10446262-10446281 | MS.gene061807:intron | 50.0% | |
| ! | AAGTGTTGCTGCACTTCCTC+TGG | + | chr4.3:10450227-10450246 | None:intergenic | 50.0% |
| ! | AGGCCTTCATTGGTTGTGAG+CGG | - | chr4.3:10448484-10448503 | MS.gene061807:intron | 50.0% |
| ! | CGATTTGGCCTTCTGTACCT+TGG | + | chr4.3:10450768-10450787 | None:intergenic | 50.0% |
| ! | GAAGAGCATGAGGTTTACGG+AGG | - | chr4.3:10445636-10445655 | MS.gene061807:CDS | 50.0% |
| !! | AATGGGCTGAAACTAAGGCC+CGG | + | chr4.3:10446950-10446969 | None:intergenic | 50.0% |
| !! | GTGCAGCTGTTGTTTCCCTT+TGG | - | chr4.3:10449262-10449281 | MS.gene061807:intron | 50.0% |
| !!! | GTGGGCCACTGGTGTTTTTT+AGG | - | chr4.3:10448755-10448774 | MS.gene061807:intron | 50.0% |
| AATCCCAGACGTGGCTGAGA+TGG | - | chr4.3:10445662-10445681 | MS.gene061807:intron | 55.0% | |
| ACAAGGAGGAGGCAGATGCT+AGG | - | chr4.3:10446288-10446307 | MS.gene061807:intron | 55.0% | |
| ACCAGGGGTCGCAGAATTTG+GGG | - | chr4.3:10447589-10447608 | MS.gene061807:intron | 55.0% | |
| CAAACTGCAGGAAGGCTCCA+AGG | - | chr4.3:10450748-10450767 | MS.gene061807:CDS | 55.0% | |
| CAACTGGAGGAGACAGCTTG+TGG | - | chr4.3:10449117-10449136 | MS.gene061807:intron | 55.0% | |
| CGATGAAGCCGGTGGTATGA+AGG | - | chr4.3:10445713-10445732 | MS.gene061807:intron | 55.0% | |
| CTGTCTGTCAAACCAGGGGT+CGG | - | chr4.3:10446981-10447000 | MS.gene061807:intron | 55.0% | |
| CTTCCATCTCAGCCACGTCT+GGG | + | chr4.3:10445668-10445687 | None:intergenic | 55.0% | |
| GGAAGGCTCCAAGGTACAGA+AGG | - | chr4.3:10450757-10450776 | MS.gene061807:CDS | 55.0% | |
| TGCACACCCTTTGGCACGTT+GGG | + | chr4.3:10449247-10449266 | None:intergenic | 55.0% | |
| TGGTCCTCTTAGGCAGAACC+TGG | + | chr4.3:10450497-10450516 | None:intergenic | 55.0% | |
| !! | CATACCACCGGCTTCATCGT+CGG | + | chr4.3:10445712-10445731 | None:intergenic | 55.0% |
| AAAGCAGTTTCGCCGACCCC+TGG | + | chr4.3:10446996-10447015 | None:intergenic | 60.0% | |
| ACCCCAAATTCTGCGACCCC+TGG | + | chr4.3:10447593-10447612 | None:intergenic | 60.0% | |
| CCACCAGCACTACAGCGTTG+TGG | + | chr4.3:10447216-10447235 | None:intergenic | 60.0% | |
| CCAGACGTGGCTGAGATGGA+AGG | - | chr4.3:10445666-10445685 | MS.gene061807:intron | 60.0% | |
| CCTTCCATCTCAGCCACGTC+TGG | + | chr4.3:10445669-10445688 | None:intergenic | 60.0% | |
| CGGAGGAGAAATCCCAGACG+TGG | - | chr4.3:10445653-10445672 | MS.gene061807:CDS | 60.0% | |
| CTGCACACCCTTTGGCACGT+TGG | + | chr4.3:10449248-10449267 | None:intergenic | 60.0% | |
| ! | CCACAACGCTGTAGTGCTGG+TGG | - | chr4.3:10447213-10447232 | MS.gene061807:intron | 60.0% |
| ! | GTATTTTGCGGGTGGGCCAC+TGG | - | chr4.3:10448744-10448763 | MS.gene061807:intron | 60.0% |
| !! | GAGGCGCCGCTTGAAGGAAA+TGG | - | chr4.3:10445749-10445768 | MS.gene061807:intron | 60.0% |
| !! | TGAGATGAGGCGCCGCTTGA+AGG | - | chr4.3:10445743-10445762 | MS.gene061807:intron | 60.0% |
| !! | ACCACCGGCTTCATCGTCGG+CGG | + | chr4.3:10445709-10445728 | None:intergenic | 65.0% |
| TCCGCCGCCGACGATGAAGC+CGG | - | chr4.3:10445702-10445721 | MS.gene061807:intron | 70.0% | |
| ! | ACCGGCTTCATCGTCGGCGG+CGG | + | chr4.3:10445706-10445725 | None:intergenic | 70.0% |
| GCCGCCGACGATGAAGCCGG+TGG | - | chr4.3:10445705-10445724 | MS.gene061807:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10445627 | 10450806 | 10445627 | ID=MS.gene061807 |
| chr4.3 | mRNA | 10445627 | 10450806 | 10445627 | ID=MS.gene061807.t1;Parent=MS.gene061807 |
| chr4.3 | exon | 10450596 | 10450806 | 10450596 | ID=MS.gene061807.t1.exon1;Parent=MS.gene061807.t1 |
| chr4.3 | CDS | 10450596 | 10450806 | 10450596 | ID=cds.MS.gene061807.t1;Parent=MS.gene061807.t1 |
| chr4.3 | exon | 10450105 | 10450175 | 10450105 | ID=MS.gene061807.t1.exon2;Parent=MS.gene061807.t1 |
| chr4.3 | CDS | 10450105 | 10450175 | 10450105 | ID=cds.MS.gene061807.t1;Parent=MS.gene061807.t1 |
| chr4.3 | exon | 10446036 | 10446227 | 10446036 | ID=MS.gene061807.t1.exon3;Parent=MS.gene061807.t1 |
| chr4.3 | CDS | 10446036 | 10446227 | 10446036 | ID=cds.MS.gene061807.t1;Parent=MS.gene061807.t1 |
| chr4.3 | exon | 10445808 | 10445935 | 10445808 | ID=MS.gene061807.t1.exon4;Parent=MS.gene061807.t1 |
| chr4.3 | CDS | 10445808 | 10445935 | 10445808 | ID=cds.MS.gene061807.t1;Parent=MS.gene061807.t1 |
| chr4.3 | exon | 10445627 | 10445675 | 10445627 | ID=MS.gene061807.t1.exon5;Parent=MS.gene061807.t1 |
| chr4.3 | CDS | 10445627 | 10445675 | 10445627 | ID=cds.MS.gene061807.t1;Parent=MS.gene061807.t1 |
| Gene Sequence |
| Protein sequence |
