Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57322.t1 | XP_013446771.1 | 100 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.70E-102 | 382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57322.t1 | Q9LX90 | 71.1 | 218 | 58 | 2 | 1 | 215 | 1 | 216 | 6.0e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57322.t1 | B7FID7 | 100.0 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.2e-102 | 382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09287 | MS.gene57322 | PPI |
| MS.gene030837 | MS.gene57322 | PPI |
| MS.gene034607 | MS.gene57322 | PPI |
| MS.gene061807 | MS.gene57322 | PPI |
| MS.gene023503 | MS.gene57322 | PPI |
| MS.gene46475 | MS.gene57322 | PPI |
| MS.gene28048 | MS.gene57322 | PPI |
| MS.gene08957 | MS.gene57322 | PPI |
| MS.gene39195 | MS.gene57322 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57322.t1 | MTR_8g089990 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 6.26e-161 | 443 |
| MS.gene57322.t1 | MTR_4g094260 | 72.222 | 198 | 49 | 3 | 22 | 216 | 5 | 199 | 9.32e-95 | 275 |
| MS.gene57322.t1 | MTR_1g073000 | 69.730 | 185 | 48 | 4 | 1 | 177 | 1 | 185 | 2.39e-87 | 256 |
| MS.gene57322.t1 | MTR_1g049070 | 60.150 | 133 | 47 | 2 | 83 | 215 | 24 | 150 | 1.52e-45 | 148 |
| MS.gene57322.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 124 | 265 | 6.61e-42 | 143 |
| MS.gene57322.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 133 | 274 | 7.99e-42 | 143 |
| MS.gene57322.t1 | MTR_3g028140 | 32.121 | 165 | 98 | 4 | 37 | 188 | 454 | 617 | 9.74e-17 | 78.6 |
| MS.gene57322.t1 | MTR_3g028140 | 36.154 | 130 | 74 | 4 | 37 | 158 | 454 | 582 | 4.54e-14 | 70.9 |
| MS.gene57322.t1 | MTR_8g037000 | 34.091 | 132 | 85 | 2 | 34 | 164 | 585 | 715 | 8.59e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57322.t1 | AT5G10350 | 79.358 | 218 | 40 | 2 | 1 | 215 | 1 | 216 | 1.07e-123 | 349 |
| MS.gene57322.t1 | AT5G65260 | 78.182 | 220 | 42 | 2 | 1 | 215 | 1 | 219 | 1.51e-122 | 346 |
| MS.gene57322.t1 | AT5G10350 | 78.922 | 204 | 38 | 2 | 1 | 201 | 1 | 202 | 5.43e-114 | 324 |
| MS.gene57322.t1 | AT5G51120 | 65.934 | 182 | 54 | 4 | 36 | 215 | 52 | 227 | 6.74e-81 | 241 |
| MS.gene57322.t1 | AT5G51120 | 54.338 | 219 | 56 | 4 | 36 | 215 | 52 | 265 | 6.12e-73 | 222 |
| MS.gene57322.t1 | AT5G51120 | 69.014 | 142 | 37 | 3 | 76 | 215 | 6 | 142 | 2.55e-64 | 196 |
| MS.gene57322.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene57322.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene57322.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene57322.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene57322.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 467 | 545 | 2.09e-12 | 65.9 |
| MS.gene57322.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 475 | 553 | 2.41e-12 | 65.9 |
Find 72 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTACTCCCCTTATGGATA+TGG | 0.236806 | 4.1:-10558282 | MS.gene57322:CDS |
| CCTTACATGTACTCCCCTTA+TGG | 0.286031 | 4.1:-10558288 | MS.gene57322:CDS |
| TGTTGAAACTGAAGCTGTTC+AGG | 0.288259 | 4.1:-10558557 | MS.gene57322:CDS |
| CCTTCCATCTCAGCCACGTC+TGG | 0.288464 | 4.1:+10563116 | None:intergenic |
| GCTAAGGTCGAGAAGGAAAT+TGG | 0.324391 | 4.1:-10562978 | MS.gene57322:CDS |
| GAAGAAGAGCATGAGGTTTA+CGG | 0.370305 | 4.1:-10563149 | MS.gene57322:CDS |
| GGACGATATTGTTTCATTCC+AGG | 0.377330 | 4.1:+10558363 | None:intergenic |
| CATATGAAAATCTAATAGTA+TGG | 0.377476 | 4.1:+10558090 | None:intergenic |
| CCTAAGAGGACCAATGTTCC+TGG | 0.382849 | 4.1:-10558381 | MS.gene57322:CDS |
| GCAATTCAGATTCAGATAAC+AGG | 0.397844 | 4.1:+10558527 | None:intergenic |
| CTTACATGGCATATGGCTTC+AGG | 0.398490 | 4.1:-10558326 | MS.gene57322:CDS |
| AGTCATGTGGTACAGTGAAC+AGG | 0.398603 | 4.1:-10558636 | MS.gene57322:CDS |
| TCCACATAAGCAAAACCTTT+AGG | 0.401589 | 4.1:+10558583 | None:intergenic |
| TTCAATCCTTACATGGCATA+TGG | 0.408319 | 4.1:-10558333 | MS.gene57322:CDS |
| AAGGAAATTGGCTCCGTTCA+AGG | 0.424617 | 4.1:-10562966 | MS.gene57322:intron |
| CCATAAGGGGAGTACATGTA+AGG | 0.425661 | 4.1:+10558288 | None:intergenic |
| TGCTTCTGTAGCTGCTTCTC+AGG | 0.427087 | 4.1:-10562606 | MS.gene57322:CDS |
| TAGTATGGCATGTAACGATT+TGG | 0.431577 | 4.1:+10558105 | None:intergenic |
| CCAGGAACATTGGTCCTCTT+AGG | 0.432535 | 4.1:+10558381 | None:intergenic |
| GTTTCCAGGTTCTGCCTAAG+AGG | 0.441058 | 4.1:-10558395 | MS.gene57322:intron |
| TGAGATGAGGCGCCGCTTGA+AGG | 0.443239 | 4.1:-10563039 | MS.gene57322:CDS |
| CTTCTTCCATTTCCTTCAAG+CGG | 0.444637 | 4.1:+10563027 | None:intergenic |
| AAGTGTTGCTGCACTTCCTC+TGG | 0.447138 | 4.1:+10558661 | None:intergenic |
| GAGGCGCCGCTTGAAGGAAA+TGG | 0.451064 | 4.1:-10563033 | MS.gene57322:CDS |
| ACTATCCTGACAGACAAGTT+TGG | 0.451284 | 4.1:-10558610 | MS.gene57322:CDS |
| CGATTTGGCCTTCTGTACCT+TGG | 0.467595 | 4.1:+10558120 | None:intergenic |
| CTGAAGCCATATGCCATGTA+AGG | 0.472571 | 4.1:+10558327 | None:intergenic |
| GACAAGTTTGGTCAGCCTAA+AGG | 0.475002 | 4.1:-10558598 | MS.gene57322:CDS |
| AATCCCAGACGTGGCTGAGA+TGG | 0.477332 | 4.1:-10563120 | MS.gene57322:CDS |
| CGATGAAGCCGGTGGTATGA+AGG | 0.484886 | 4.1:-10563069 | MS.gene57322:CDS |
| GCTGACCAAACTTGTCTGTC+AGG | 0.485268 | 4.1:+10558605 | None:intergenic |
| GAATGAAACAATATCGTCCT+AGG | 0.485505 | 4.1:-10558359 | MS.gene57322:CDS |
| TGTACTCCCCTTATGGATAT+GGG | 0.497226 | 4.1:-10558281 | MS.gene57322:intron |
| TTGCGTACCCATATCCATAA+GGG | 0.499244 | 4.1:+10558274 | None:intergenic |
| GTTGCGTACCCATATCCATA+AGG | 0.507988 | 4.1:+10558273 | None:intergenic |
| TGAGAAGCAGCTACAGAAGC+AGG | 0.509186 | 4.1:+10562608 | None:intergenic |
| ACCGGCTTCATCGTCGGCGG+CGG | 0.522837 | 4.1:+10563079 | None:intergenic |
| CTTCCATCTCAGCCACGTCT+GGG | 0.525363 | 4.1:+10563117 | None:intergenic |
| ATCGAGCTCCTTCATACCAC+CGG | 0.547125 | 4.1:+10563061 | None:intergenic |
| AGCTGCTTCTCAGGAAAACA+AGG | 0.560487 | 4.1:-10562597 | MS.gene57322:CDS |
| TTGTTTCATTCCAGGAACAT+TGG | 0.561559 | 4.1:+10558371 | None:intergenic |
| CATAAGGGGAGTACATGTAA+GGG | 0.562096 | 4.1:+10558289 | None:intergenic |
| GATGGATGAAGAAGAGCATG+AGG | 0.564377 | 4.1:-10563156 | MS.gene57322:CDS |
| TCCGCCGCCGACGATGAAGC+CGG | 0.571081 | 4.1:-10563080 | MS.gene57322:CDS |
| CATACCACCGGCTTCATCGT+CGG | 0.574346 | 4.1:+10563073 | None:intergenic |
| TTCTCAGGAAAACAAGGAGG+AGG | 0.576078 | 4.1:-10562591 | MS.gene57322:CDS |
| CCAGACGTGGCTGAGATGGA+AGG | 0.591120 | 4.1:-10563116 | MS.gene57322:CDS |
| AGCATGCATTTCACGAAGAG+CGG | 0.591158 | 4.1:+10562998 | None:intergenic |
| TCTTCGTGAAATGCATGCTA+AGG | 0.591257 | 4.1:-10562994 | MS.gene57322:CDS |
| TAGGCGATTCAATCCTTACA+TGG | 0.592543 | 4.1:-10558340 | MS.gene57322:CDS |
| GGAAGGCTCCAAGGTACAGA+AGG | 0.594290 | 4.1:-10558128 | MS.gene57322:CDS |
| ATGCATTTCACGAAGAGCGG+CGG | 0.600008 | 4.1:+10563001 | None:intergenic |
| ATCATTATGAAGACCTTGAA+CGG | 0.601110 | 4.1:+10562953 | None:intergenic |
| ACAAGGAGGAGGCAGATGCT+AGG | 0.602973 | 4.1:-10562580 | MS.gene57322:CDS |
| TTATCTGAATCTGAATTGCA+TGG | 0.610170 | 4.1:-10558523 | MS.gene57322:CDS |
| TGAAGGAGCTCGATGAGATG+AGG | 0.616758 | 4.1:-10563052 | MS.gene57322:CDS |
| CAAACTGCAGGAAGGCTCCA+AGG | 0.621276 | 4.1:-10558137 | MS.gene57322:intron |
| GTCATGTGGTACAGTGAACA+GGG | 0.623456 | 4.1:-10558635 | MS.gene57322:CDS |
| ATGTAAGGATTGAATCGCCT+AGG | 0.636374 | 4.1:+10558342 | None:intergenic |
| CAGCAACACTTTCAGTCATG+TGG | 0.638722 | 4.1:-10558649 | MS.gene57322:CDS |
| AATGCATGCTAAGGTCGAGA+AGG | 0.646081 | 4.1:-10562985 | MS.gene57322:CDS |
| CGGAGGAGAAATCCCAGACG+TGG | 0.649618 | 4.1:-10563129 | MS.gene57322:CDS |
| TGAAACTGAAGCTGTTCAGG+AGG | 0.649806 | 4.1:-10558554 | MS.gene57322:CDS |
| TGCGTACCCATATCCATAAG+GGG | 0.658223 | 4.1:+10558275 | None:intergenic |
| GCCGCCGACGATGAAGCCGG+TGG | 0.660392 | 4.1:-10563077 | MS.gene57322:CDS |
| ATAAGGGGAGTACATGTAAG+GGG | 0.666152 | 4.1:+10558290 | None:intergenic |
| ACCACCGGCTTCATCGTCGG+CGG | 0.666758 | 4.1:+10563076 | None:intergenic |
| TGATTATGCATGCACACCAG+AGG | 0.670537 | 4.1:-10558677 | MS.gene57322:CDS |
| GAAGAGCATGAGGTTTACGG+AGG | 0.680084 | 4.1:-10563146 | MS.gene57322:CDS |
| ACATGGCATATGGCTTCAGG+AGG | 0.690213 | 4.1:-10558323 | MS.gene57322:CDS |
| TGCTTCTCAGGAAAACAAGG+AGG | 0.704124 | 4.1:-10562594 | MS.gene57322:CDS |
| TAAGGGGAGTACATGTAAGG+GGG | 0.709420 | 4.1:+10558291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAAAATTAAAATCAAA+AGG | - | chr4.1:10558926-10558945 | MS.gene57322:intron | 10.0% |
| !! | TCAAAAAATTAAAATCAAAA+GGG | - | chr4.1:10558927-10558946 | MS.gene57322:intron | 10.0% |
| !!! | ATTTTTTATTGTTTTTCAAT+CGG | - | chr4.1:10558738-10558757 | MS.gene57322:intron | 10.0% |
| !! | ACAATTATTAATTGTAAGTT+TGG | - | chr4.1:10560139-10560158 | MS.gene57322:intron | 15.0% |
| !! | ATATAAATACAACAGATATT+GGG | + | chr4.1:10559178-10559197 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTTTTGATGATG+AGG | + | chr4.1:10558922-10558941 | None:intergenic | 15.0% |
| !!! | CATTTATGATCTTTTTAATA+CGG | + | chr4.1:10562257-10562276 | None:intergenic | 15.0% |
| !!! | TATATTTTGCATTTTTCAAA+AGG | - | chr4.1:10562304-10562323 | MS.gene57322:intron | 15.0% |
| !!! | TGTCTTTAAAGTTTAAATTA+AGG | + | chr4.1:10560116-10560135 | None:intergenic | 15.0% |
| !!! | TTGTAAGATATTTTAGAAAT+GGG | + | chr4.1:10561734-10561753 | None:intergenic | 15.0% |
| !!! | TTTGTAAGATATTTTAGAAA+TGG | + | chr4.1:10561735-10561754 | None:intergenic | 15.0% |
| !!! | TTTTGTATGATAAATGAATT+GGG | - | chr4.1:10562478-10562497 | MS.gene57322:intron | 15.0% |
| !!! | TTTTGTTGTTATTAAATTGT+GGG | + | chr4.1:10559764-10559783 | None:intergenic | 15.0% |
| !!! | TTTTTGTATGATAAATGAAT+TGG | - | chr4.1:10562477-10562496 | MS.gene57322:intron | 15.0% |
| !! | AAAAACATACTTTCAATTGA+CGG | + | chr4.1:10562759-10562778 | None:intergenic | 20.0% |
| !! | AAAAATTAAAATCAAAAGGG+CGG | - | chr4.1:10558930-10558949 | MS.gene57322:intron | 20.0% |
| !! | AAAGAAATGAGAAAAGAAAA+AGG | - | chr4.1:10561361-10561380 | MS.gene57322:intron | 20.0% |
| !! | AAATTGATGAAATAGATAGT+AGG | - | chr4.1:10559038-10559057 | MS.gene57322:intron | 20.0% |
| !! | AAATTGTACAAAGTTTATGA+AGG | + | chr4.1:10561823-10561842 | None:intergenic | 20.0% |
| !! | AGAAAGAACATTGAATAAAT+GGG | + | chr4.1:10559934-10559953 | None:intergenic | 20.0% |
| !! | ATACGCTATTTATTACAAAA+TGG | + | chr4.1:10559553-10559572 | None:intergenic | 20.0% |
| !! | ATTAATCGAAAGATAGTATT+AGG | - | chr4.1:10559733-10559752 | MS.gene57322:intron | 20.0% |
| !! | GAATAGATAATGAAATAAGT+TGG | + | chr4.1:10561789-10561808 | None:intergenic | 20.0% |
| !! | GATATAAATACAACAGATAT+TGG | + | chr4.1:10559179-10559198 | None:intergenic | 20.0% |
| !! | TCATAAACTTTGTACAATTT+AGG | - | chr4.1:10561823-10561842 | MS.gene57322:intron | 20.0% |
| !! | TTTAATAACAACAAAAGTCA+CGG | - | chr4.1:10559768-10559787 | MS.gene57322:intron | 20.0% |
| !!! | AAACATTTCAGTTTTATTGA+TGG | - | chr4.1:10558508-10558527 | MS.gene57322:intron | 20.0% |
| !!! | AAACTGCTTTCTTTTAATAA+TGG | - | chr4.1:10559394-10559413 | MS.gene57322:intron | 20.0% |
| !!! | AAATCTGATTTGAGAAAAAA+AGG | + | chr4.1:10560891-10560910 | None:intergenic | 20.0% |
| !!! | ATATTTTAGAAATGGGAAAA+GGG | + | chr4.1:10561727-10561746 | None:intergenic | 20.0% |
| !!! | ATGAATTTTACAGTTCAAAA+TGG | - | chr4.1:10562148-10562167 | MS.gene57322:intron | 20.0% |
| !!! | ATTTGTAGTTTTTGATGATA+CGG | - | chr4.1:10562831-10562850 | MS.gene57322:intron | 20.0% |
| !!! | CTCTTTTTAACATTTTGATT+GGG | - | chr4.1:10558611-10558630 | MS.gene57322:CDS | 20.0% |
| !!! | CTTTTGTTGTTATTAAATTG+TGG | + | chr4.1:10559765-10559784 | None:intergenic | 20.0% |
| !!! | GAAAAATAAAGAACATTTTG+AGG | - | chr4.1:10561383-10561402 | MS.gene57322:intron | 20.0% |
| !!! | GATTTTTAATAGTGTGATTA+TGG | - | chr4.1:10562446-10562465 | MS.gene57322:intron | 20.0% |
| !!! | TATTTAGAATTGACTTTTTG+TGG | - | chr4.1:10563079-10563098 | MS.gene57322:CDS | 20.0% |
| !!! | TCTCTTTTTAACATTTTGAT+TGG | - | chr4.1:10558610-10558629 | MS.gene57322:CDS | 20.0% |
| !!! | TGAATTTTACAGTTCAAAAT+GGG | - | chr4.1:10562149-10562168 | MS.gene57322:intron | 20.0% |
| !!! | TGTACAGTTTTTTTTTTGTT+TGG | - | chr4.1:10560985-10561004 | MS.gene57322:intron | 20.0% |
| !!! | TTTGTTTTTTGTTTTCAGAT+AGG | + | chr4.1:10559881-10559900 | None:intergenic | 20.0% |
| ! | AAGTAAAAACAAGAAAGTCA+AGG | - | chr4.1:10560178-10560197 | MS.gene57322:intron | 25.0% |
| ! | AATTATGAGATAAAGACCAA+AGG | + | chr4.1:10561652-10561671 | None:intergenic | 25.0% |
| ! | AATTTGTATACAACGGATAT+TGG | + | chr4.1:10559150-10559169 | None:intergenic | 25.0% |
| ! | AGACAGAACATTGAATAAAT+GGG | + | chr4.1:10559355-10559374 | None:intergenic | 25.0% |
| ! | AGCATACAGAAATTTAAATG+AGG | + | chr4.1:10563012-10563031 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGACCAAA+GGG | + | chr4.1:10561651-10561670 | None:intergenic | 25.0% |
| ! | ATTTGTATACAACGGATATT+GGG | + | chr4.1:10559149-10559168 | None:intergenic | 25.0% |
| ! | CAGAAAGAACATTGAATAAA+TGG | + | chr4.1:10559935-10559954 | None:intergenic | 25.0% |
| ! | GGTGAAAAATTTGTATACAA+CGG | + | chr4.1:10559157-10559176 | None:intergenic | 25.0% |
| ! | TAGTTCGTAATAACTAAATC+AGG | + | chr4.1:10558860-10558879 | None:intergenic | 25.0% |
| ! | TATATATATACTGCAGTATG+CGG | - | chr4.1:10559665-10559684 | MS.gene57322:intron | 25.0% |
| ! | TATTTACCTAATCAACGTAA+AGG | - | chr4.1:10558828-10558847 | MS.gene57322:intron | 25.0% |
| ! | TCTAAATAACAATTGAGCTT+TGG | + | chr4.1:10563067-10563086 | None:intergenic | 25.0% |
| ! | TGTTGTTATGAAATTTAGTG+AGG | - | chr4.1:10561179-10561198 | MS.gene57322:intron | 25.0% |
| ! | TTCATATCCAACTAAACAAT+AGG | + | chr4.1:10558798-10558817 | None:intergenic | 25.0% |
| ! | TTGTAATAAATAGCGTATCA+CGG | - | chr4.1:10559555-10559574 | MS.gene57322:intron | 25.0% |
| !! | ATGTTAACATTGTATTTTGC+GGG | - | chr4.1:10561104-10561123 | MS.gene57322:intron | 25.0% |
| !! | GATGTTAACATTGTATTTTG+CGG | - | chr4.1:10561103-10561122 | MS.gene57322:intron | 25.0% |
| !! | GATTCGAGTTAATTCAATTA+AGG | + | chr4.1:10558386-10558405 | None:intergenic | 25.0% |
| !! | TATAGGCAAACTTCTTTTTA+TGG | - | chr4.1:10562009-10562028 | MS.gene57322:intron | 25.0% |
| !! | TCAAATCAGATTTGTTTCAA+TGG | - | chr4.1:10560898-10560917 | MS.gene57322:intron | 25.0% |
| !! | TGTTTTCACGTTTATGAATT+AGG | - | chr4.1:10561671-10561690 | MS.gene57322:intron | 25.0% |
| !!! | GATATTTTAGAAATGGGAAA+AGG | + | chr4.1:10561728-10561747 | None:intergenic | 25.0% |
| !!! | TTCCTGATATTTTTTTGTTG+AGG | - | chr4.1:10561695-10561714 | MS.gene57322:intron | 25.0% |
| AAATAGTAGTATGTGTGAGA+AGG | - | chr4.1:10561931-10561950 | MS.gene57322:intron | 30.0% | |
| AAATCACATGGGTACAATAT+TGG | + | chr4.1:10560565-10560584 | None:intergenic | 30.0% | |
| AACATGTTCACCTATAGATA+CGG | + | chr4.1:10559908-10559927 | None:intergenic | 30.0% | |
| AACTGACGATATAGATGATA+TGG | - | chr4.1:10562331-10562350 | MS.gene57322:intron | 30.0% | |
| AATCATGGATCACAAAAAAG+TGG | - | chr4.1:10559473-10559492 | MS.gene57322:intron | 30.0% | |
| ACCAGAATAGAATAATTACG+TGG | + | chr4.1:10560623-10560642 | None:intergenic | 30.0% | |
| ACGAACTAATTTAGTAGTCT+TGG | - | chr4.1:10558872-10558891 | MS.gene57322:intron | 30.0% | |
| AGAAAGTCAAGGATCATAAA+AGG | - | chr4.1:10560189-10560208 | MS.gene57322:intron | 30.0% | |
| AGCCTCAACAAAAAAATATC+AGG | + | chr4.1:10561700-10561719 | None:intergenic | 30.0% | |
| AGGGAAAAATGGCTAAATAA+TGG | + | chr4.1:10559309-10559328 | None:intergenic | 30.0% | |
| ATCATTATGAAGACCTTGAA+CGG | + | chr4.1:10558306-10558325 | None:intergenic | 30.0% | |
| ATGAAATAGATAGTAGGCAA+TGG | - | chr4.1:10559044-10559063 | MS.gene57322:intron | 30.0% | |
| CAAGAATTGCAAAATCACAT+GGG | + | chr4.1:10560576-10560595 | None:intergenic | 30.0% | |
| CAGACAGAACATTGAATAAA+TGG | + | chr4.1:10559356-10559375 | None:intergenic | 30.0% | |
| CATGCTTGCTTATAGATAAA+TGG | + | chr4.1:10560308-10560327 | None:intergenic | 30.0% | |
| CATTTATCTATAAGCAAGCA+TGG | - | chr4.1:10560306-10560325 | MS.gene57322:intron | 30.0% | |
| CATTTGTAACTATTCATGGT+GGG | - | chr4.1:10560816-10560835 | MS.gene57322:intron | 30.0% | |
| CGATTAATAATTATGAGTGC+AGG | + | chr4.1:10559721-10559740 | None:intergenic | 30.0% | |
| GAAAGTCAAGGATCATAAAA+GGG | - | chr4.1:10560190-10560209 | MS.gene57322:intron | 30.0% | |
| GTAAAAGTTAGATGCTGAAT+TGG | + | chr4.1:10558433-10558452 | None:intergenic | 30.0% | |
| TACATACATGTAGAGTGATT+AGG | + | chr4.1:10558983-10559002 | None:intergenic | 30.0% | |
| TAGAATAATTACGTGGAACA+AGG | + | chr4.1:10560616-10560635 | None:intergenic | 30.0% | |
| TCAAGAATTGCAAAATCACA+TGG | + | chr4.1:10560577-10560596 | None:intergenic | 30.0% | |
| TCATGGCTAATTTAAACTCA+AGG | + | chr4.1:10562798-10562817 | None:intergenic | 30.0% | |
| TCCACGTAATTATTCTATTC+TGG | - | chr4.1:10560619-10560638 | MS.gene57322:intron | 30.0% | |
| TGAAGACACATGAATTTCAA+GGG | + | chr4.1:10562556-10562575 | None:intergenic | 30.0% | |
| TGTTGTGAATTACTACTATG+AGG | - | chr4.1:10561900-10561919 | MS.gene57322:intron | 30.0% | |
| TTATCTGAATCTGAATTGCA+TGG | - | chr4.1:10562733-10562752 | MS.gene57322:intron | 30.0% | |
| TTTGCATCCTATTGTTTAGT+TGG | - | chr4.1:10558788-10558807 | MS.gene57322:intron | 30.0% | |
| ! | AAATTTAGTGAGGTATCACA+CGG | - | chr4.1:10561189-10561208 | MS.gene57322:intron | 30.0% |
| ! | CAAACTTCTTTTTATGGAGT+TGG | - | chr4.1:10562015-10562034 | MS.gene57322:intron | 30.0% |
| ! | GAAGCATTTGTAACTATTCA+TGG | - | chr4.1:10560812-10560831 | MS.gene57322:intron | 30.0% |
| ! | GATTTGTTTCAATGGATTTC+AGG | - | chr4.1:10560906-10560925 | MS.gene57322:intron | 30.0% |
| ! | TGAGTATATTGATAACAGGA+CGG | + | chr4.1:10560541-10560560 | None:intergenic | 30.0% |
| ! | TGGTTGAGTATATTGATAAC+AGG | + | chr4.1:10560545-10560564 | None:intergenic | 30.0% |
| !!! | GCTTGATTTGGTTTTATTGT+TGG | - | chr4.1:10562037-10562056 | MS.gene57322:intron | 30.0% |
| !!! | TGATTTGGTTTTATTGTTGG+TGG | - | chr4.1:10562040-10562059 | MS.gene57322:intron | 30.0% |
| !!! | TTTTTTAGGCTCATAGTAGA+GGG | - | chr4.1:10561140-10561159 | MS.gene57322:intron | 30.0% |
| AAAAGTCACGGATCATAAAG+GGG | - | chr4.1:10559780-10559799 | MS.gene57322:intron | 35.0% | |
| AAAATTTGTATGCCACGTAG+AGG | + | chr4.1:10559123-10559142 | None:intergenic | 35.0% | |
| AACAAACCAACCGTATCTAT+AGG | - | chr4.1:10559895-10559914 | MS.gene57322:intron | 35.0% | |
| AATGTTCTTTCTGTCAAACC+AGG | - | chr4.1:10559942-10559961 | MS.gene57322:intron | 35.0% | |
| AATTACGTGGAACAAGGAAA+AGG | + | chr4.1:10560610-10560629 | None:intergenic | 35.0% | |
| ACAAAAGTCACGGATCATAA+AGG | - | chr4.1:10559778-10559797 | MS.gene57322:intron | 35.0% | |
| ACTAACAATCTTCAGAGACA+GGG | - | chr4.1:10561015-10561034 | MS.gene57322:intron | 35.0% | |
| AGATGATTCAACTTCACAAC+TGG | - | chr4.1:10561472-10561491 | MS.gene57322:intron | 35.0% | |
| ATCAGAACACAACTGTCATT+TGG | + | chr4.1:10560426-10560445 | None:intergenic | 35.0% | |
| ATGAGTGAAATGCACAATGA+AGG | - | chr4.1:10561982-10562001 | MS.gene57322:intron | 35.0% | |
| ATGTTCTTTCTGTCAAACCA+GGG | - | chr4.1:10559943-10559962 | MS.gene57322:intron | 35.0% | |
| ATTACGTGGAACAAGGAAAA+GGG | + | chr4.1:10560609-10560628 | None:intergenic | 35.0% | |
| ATTAGTTCACACACGCTATT+AGG | - | chr4.1:10560774-10560793 | MS.gene57322:intron | 35.0% | |
| CAAAAGTCACGGATCATAAA+GGG | - | chr4.1:10559779-10559798 | MS.gene57322:intron | 35.0% | |
| CCTAATCAACGTAAAGGATA+AGG | - | chr4.1:10558834-10558853 | MS.gene57322:intron | 35.0% | |
| CTGAAGACACATGAATTTCA+AGG | + | chr4.1:10562557-10562576 | None:intergenic | 35.0% | |
| CTGATGTGTGAAATAAGGAT+TGG | - | chr4.1:10560441-10560460 | MS.gene57322:intron | 35.0% | |
| CTTGAAATTCATGTGTCTTC+AGG | - | chr4.1:10562555-10562574 | MS.gene57322:intron | 35.0% | |
| GAATGAAACAATATCGTCCT+AGG | - | chr4.1:10562897-10562916 | MS.gene57322:intron | 35.0% | |
| GACGACAAAAAAGAACAAGT+TGG | + | chr4.1:10559086-10559105 | None:intergenic | 35.0% | |
| GAGATCAATGTTGTCAATCA+TGG | - | chr4.1:10559458-10559477 | MS.gene57322:intron | 35.0% | |
| GCAATTCAGATTCAGATAAC+AGG | + | chr4.1:10562732-10562751 | None:intergenic | 35.0% | |
| GCATTTGTAACTATTCATGG+TGG | - | chr4.1:10560815-10560834 | MS.gene57322:intron | 35.0% | |
| GTATCTATAGGTGAACATGT+TGG | - | chr4.1:10559907-10559926 | MS.gene57322:intron | 35.0% | |
| GTGTTCTGATGTGTGAAATA+AGG | - | chr4.1:10560436-10560455 | MS.gene57322:intron | 35.0% | |
| GTTAATCACGACGATAATCA+TGG | + | chr4.1:10558475-10558494 | None:intergenic | 35.0% | |
| TAACATCCAGCGCTAATTAT+AGG | + | chr4.1:10561090-10561109 | None:intergenic | 35.0% | |
| TACAAGTCACCTAAAGAATG+AGG | + | chr4.1:10561861-10561880 | None:intergenic | 35.0% | |
| TACTAACAATCTTCAGAGAC+AGG | - | chr4.1:10561014-10561033 | MS.gene57322:intron | 35.0% | |
| TAGTATGGCATGTAACGATT+TGG | + | chr4.1:10563154-10563173 | None:intergenic | 35.0% | |
| TATATGCAAGACTCATGTCT+CGG | + | chr4.1:10562421-10562440 | None:intergenic | 35.0% | |
| TCCACATAAGCAAAACCTTT+AGG | + | chr4.1:10562676-10562695 | None:intergenic | 35.0% | |
| TGCAATCTTCCTCATTCTTT+AGG | - | chr4.1:10561849-10561868 | MS.gene57322:intron | 35.0% | |
| TGTCTCTTAACTCCATTATG+TGG | - | chr4.1:10559240-10559259 | MS.gene57322:intron | 35.0% | |
| TGTGAATTACTACTATGAGG+AGG | - | chr4.1:10561903-10561922 | MS.gene57322:intron | 35.0% | |
| TTCAATCCTTACATGGCATA+TGG | - | chr4.1:10562923-10562942 | MS.gene57322:intron | 35.0% | |
| TTGTTTCATTCCAGGAACAT+TGG | + | chr4.1:10562888-10562907 | None:intergenic | 35.0% | |
| ! | ATAATGGAGTTAAGAGACAG+AGG | + | chr4.1:10559239-10559258 | None:intergenic | 35.0% |
| ! | CCTTATCCTTTACGTTGATT+AGG | + | chr4.1:10558837-10558856 | None:intergenic | 35.0% |
| ! | GAATGTCGTCTTTGAAAAGT+AGG | - | chr4.1:10559841-10559860 | MS.gene57322:intron | 35.0% |
| ! | GTGCATTTCACTCATTTTAC+AGG | + | chr4.1:10561977-10561996 | None:intergenic | 35.0% |
| ! | TAACATTGTATTTTGCGGGT+GGG | - | chr4.1:10561108-10561127 | MS.gene57322:intron | 35.0% |
| ! | TTAACATTGTATTTTGCGGG+TGG | - | chr4.1:10561107-10561126 | MS.gene57322:intron | 35.0% |
| !! | ATGCTCTAAGATAGTTGGTT+TGG | - | chr4.1:10560501-10560520 | MS.gene57322:intron | 35.0% |
| !! | CATTTTGAGGAAACTGTGAA+TGG | - | chr4.1:10561396-10561415 | MS.gene57322:intron | 35.0% |
| !! | GAATAAATGGGCTGAAACTA+AGG | + | chr4.1:10559343-10559362 | None:intergenic | 35.0% |
| !! | GACGTCTTTCAATTTTGAAG+CGG | + | chr4.1:10560231-10560250 | None:intergenic | 35.0% |
| !! | TGGAAATGCTCTAAGATAGT+TGG | - | chr4.1:10560496-10560515 | MS.gene57322:intron | 35.0% |
| !! | TTGTTTTTCAATCGGAACCA+TGG | - | chr4.1:10558746-10558765 | MS.gene57322:intron | 35.0% |
| !! | TTTATGGAGTTGGCTTGATT+TGG | - | chr4.1:10562025-10562044 | MS.gene57322:intron | 35.0% |
| !! | TTTTTAGGCTCATAGTAGAG+GGG | - | chr4.1:10561141-10561160 | MS.gene57322:intron | 35.0% |
| !!! | GTTGTTTTTTGCTTTCAGAG+AGG | + | chr4.1:10560281-10560300 | None:intergenic | 35.0% |
| !!! | GTTTTTTAGGCTCATAGTAG+AGG | - | chr4.1:10561139-10561158 | MS.gene57322:intron | 35.0% |
| AAAGTCACGGATCATAAAGG+GGG | - | chr4.1:10559781-10559800 | MS.gene57322:intron | 40.0% | |
| AAATTCACTAGACGAGCTCA+TGG | + | chr4.1:10562815-10562834 | None:intergenic | 40.0% | |
| AATGTTCTGTCTGTCAAACC+AGG | - | chr4.1:10559363-10559382 | MS.gene57322:intron | 40.0% | |
| ACAACAGTACCAACCTTATC+AGG | + | chr4.1:10561886-10561905 | None:intergenic | 40.0% | |
| ACATCCTCACAAATTCAGAG+AGG | + | chr4.1:10560389-10560408 | None:intergenic | 40.0% | |
| ACCTAGTTGCAGTCAACAAA+AGG | + | chr4.1:10561569-10561588 | None:intergenic | 40.0% | |
| ACTATCCTGACAGACAAGTT+TGG | - | chr4.1:10562646-10562665 | MS.gene57322:intron | 40.0% | |
| ACTTGTAGACCTGATAAGGT+TGG | - | chr4.1:10561874-10561893 | MS.gene57322:intron | 40.0% | |
| AGGCTTATGTGGCATTCATT+TGG | + | chr4.1:10559219-10559238 | None:intergenic | 40.0% | |
| ATATATACTGCAGTATGCGG+AGG | - | chr4.1:10559668-10559687 | MS.gene57322:intron | 40.0% | |
| ATATGTCTCACTATGATCGC+AGG | - | chr4.1:10561044-10561063 | MS.gene57322:intron | 40.0% | |
| ATGAGCCTAAAAAACACCAG+TGG | + | chr4.1:10561134-10561153 | None:intergenic | 40.0% | |
| ATGGTATCAAATAGCAGCTG+TGG | + | chr4.1:10559534-10559553 | None:intergenic | 40.0% | |
| ATGTAAGGATTGAATCGCCT+AGG | + | chr4.1:10562917-10562936 | None:intergenic | 40.0% | |
| ATGTACTCCCCTTATGGATA+TGG | - | chr4.1:10562974-10562993 | MS.gene57322:CDS | 40.0% | |
| ATGTTCTGTCTGTCAAACCA+GGG | - | chr4.1:10559364-10559383 | MS.gene57322:intron | 40.0% | |
| ATTTATCCTGTTGAGTGCAG+AGG | - | chr4.1:10560064-10560083 | MS.gene57322:intron | 40.0% | |
| CAGAAACTGAGTCCACATAA+TGG | + | chr4.1:10559255-10559274 | None:intergenic | 40.0% | |
| CTGAATTGGATTGCATGCAA+TGG | + | chr4.1:10558419-10558438 | None:intergenic | 40.0% | |
| CTTCTTCCATTTCCTTCAAG+CGG | + | chr4.1:10558232-10558251 | None:intergenic | 40.0% | |
| GACTTCACAATGACTTTGCA+GGG | - | chr4.1:10562173-10562192 | MS.gene57322:intron | 40.0% | |
| GATACGGATGTTATGTTTCC+AGG | - | chr4.1:10562847-10562866 | MS.gene57322:intron | 40.0% | |
| GGACGATATTGTTTCATTCC+AGG | + | chr4.1:10562896-10562915 | None:intergenic | 40.0% | |
| GGCATTCATTTGGTCTAACA+CGG | + | chr4.1:10559209-10559228 | None:intergenic | 40.0% | |
| GGGGGAAAATTCAGAATTAG+TGG | - | chr4.1:10559799-10559818 | MS.gene57322:intron | 40.0% | |
| GTGAAATGCACAATGAAGGA+TGG | - | chr4.1:10561986-10562005 | MS.gene57322:intron | 40.0% | |
| GTGGGAACATTAGGAATTTG+AGG | - | chr4.1:10560834-10560853 | MS.gene57322:intron | 40.0% | |
| GTTACCTCTCTGAATTTGTG+AGG | - | chr4.1:10560382-10560401 | MS.gene57322:intron | 40.0% | |
| TAGGCGATTCAATCCTTACA+TGG | - | chr4.1:10562916-10562935 | MS.gene57322:intron | 40.0% | |
| TATGTCTCACTATGATCGCA+GGG | - | chr4.1:10561045-10561064 | MS.gene57322:intron | 40.0% | |
| TCTTCGTGAAATGCATGCTA+AGG | - | chr4.1:10558262-10558281 | MS.gene57322:intron | 40.0% | |
| TGACTTCACAATGACTTTGC+AGG | - | chr4.1:10562172-10562191 | MS.gene57322:intron | 40.0% | |
| TGATTCAACTTCACAACTGG+AGG | - | chr4.1:10561475-10561494 | MS.gene57322:intron | 40.0% | |
| TGCACAATGAAGGATGGTAT+AGG | - | chr4.1:10561992-10562011 | MS.gene57322:intron | 40.0% | |
| TGCATGCAATGGAGTTGAAT+CGG | + | chr4.1:10558408-10558427 | None:intergenic | 40.0% | |
| TGTACTCCCCTTATGGATAT+GGG | - | chr4.1:10562975-10562994 | MS.gene57322:CDS | 40.0% | |
| TGTTCACCTATAGATACGGT+TGG | + | chr4.1:10559904-10559923 | None:intergenic | 40.0% | |
| TGTTCTTTCTGTCAAACCAG+GGG | - | chr4.1:10559944-10559963 | MS.gene57322:intron | 40.0% | |
| TGTTGAAACTGAAGCTGTTC+AGG | - | chr4.1:10562699-10562718 | MS.gene57322:intron | 40.0% | |
| TTAAGAGACAGAGGCTTATG+TGG | + | chr4.1:10559230-10559249 | None:intergenic | 40.0% | |
| TTGCGTACCCATATCCATAA+GGG | + | chr4.1:10562985-10563004 | None:intergenic | 40.0% | |
| TTTATACCTCTGCACTCAAC+AGG | + | chr4.1:10560073-10560092 | None:intergenic | 40.0% | |
| ! | AAAAGAACAAGTTGGAAGCG+AGG | + | chr4.1:10559078-10559097 | None:intergenic | 40.0% |
| ! | ACTGTCATTTGGTCTCTGTT+CGG | + | chr4.1:10560415-10560434 | None:intergenic | 40.0% |
| ! | ATAAGGGGAGTACATGTAAG+GGG | + | chr4.1:10562969-10562988 | None:intergenic | 40.0% |
| ! | CATAAGGGGAGTACATGTAA+GGG | + | chr4.1:10562970-10562989 | None:intergenic | 40.0% |
| ! | CTATTCATGGTGGGAACATT+AGG | - | chr4.1:10560825-10560844 | MS.gene57322:intron | 40.0% |
| ! | GAAGAAGAGCATGAGGTTTA+CGG | - | chr4.1:10558107-10558126 | MS.gene57322:CDS | 40.0% |
| ! | GCCTAAAGGTTTTGCTTATG+TGG | - | chr4.1:10562672-10562691 | MS.gene57322:intron | 40.0% |
| ! | TAGGAATTTGAGGCCTTCAT+TGG | - | chr4.1:10560844-10560863 | MS.gene57322:intron | 40.0% |
| ! | TCAGAATGCTGTGAGTTTTC+TGG | - | chr4.1:10560476-10560495 | MS.gene57322:intron | 40.0% |
| ! | TGTGTGAAATAAGGATTGGC+TGG | - | chr4.1:10560445-10560464 | MS.gene57322:intron | 40.0% |
| ! | TTTTAGGCTCATAGTAGAGG+GGG | - | chr4.1:10561142-10561161 | MS.gene57322:intron | 40.0% |
| ! | TTTTTCGTCAAACTGCAGGA+AGG | - | chr4.1:10563111-10563130 | MS.gene57322:CDS | 40.0% |
| !! | TCCTTTTGTTGACTGCAACT+AGG | - | chr4.1:10561565-10561584 | MS.gene57322:intron | 40.0% |
| !! | TCTGTTTTTCGTCAAACTGC+AGG | - | chr4.1:10563107-10563126 | MS.gene57322:CDS | 40.0% |
| !!! | GAATTGGGTTTTAGCTCATC+TGG | - | chr4.1:10562493-10562512 | MS.gene57322:intron | 40.0% |
| !!! | GATGCTAGGTCTGTTTTTGT+CGG | - | chr4.1:10558690-10558709 | MS.gene57322:intron | 40.0% |
| !!! | GTTTTATTGTTGGTGGCTTG+TGG | - | chr4.1:10562047-10562066 | MS.gene57322:intron | 40.0% |
| AAAATCAAAAGGGCGGCAGT+TGG | - | chr4.1:10558937-10558956 | MS.gene57322:intron | 45.0% | |
| AATGCATGCTAAGGTCGAGA+AGG | - | chr4.1:10558271-10558290 | MS.gene57322:intron | 45.0% | |
| ACGTGTCCTATAATTAGCGC+TGG | - | chr4.1:10561081-10561100 | MS.gene57322:intron | 45.0% | |
| AGCATGCATTTCACGAAGAG+CGG | + | chr4.1:10558261-10558280 | None:intergenic | 45.0% | |
| AGCTGCTTCTCAGGAAAACA+AGG | - | chr4.1:10558659-10558678 | MS.gene57322:CDS | 45.0% | |
| AGTCATGTGGTACAGTGAAC+AGG | - | chr4.1:10562620-10562639 | MS.gene57322:intron | 45.0% | |
| AGTTTCTGCCATGCTCATGA+GGG | + | chr4.1:10561425-10561444 | None:intergenic | 45.0% | |
| ATTTGGTCTAACACGGTGAC+AGG | + | chr4.1:10559202-10559221 | None:intergenic | 45.0% | |
| CAGCAACACTTTCAGTCATG+TGG | - | chr4.1:10562607-10562626 | MS.gene57322:CDS | 45.0% | |
| CCTTACATGTACTCCCCTTA+TGG | - | chr4.1:10562968-10562987 | MS.gene57322:CDS | 45.0% | |
| CTGAAGCCATATGCCATGTA+AGG | + | chr4.1:10562932-10562951 | None:intergenic | 45.0% | |
| CTTACATGGCATATGGCTTC+AGG | - | chr4.1:10562930-10562949 | MS.gene57322:intron | 45.0% | |
| GACAAGTTTGGTCAGCCTAA+AGG | - | chr4.1:10562658-10562677 | MS.gene57322:intron | 45.0% | |
| GATCTCAAAGCTGCTATTGC+AGG | - | chr4.1:10560028-10560047 | MS.gene57322:intron | 45.0% | |
| GCAGAAACTAGTACAGCTGA+AGG | - | chr4.1:10561436-10561455 | MS.gene57322:intron | 45.0% | |
| GCTAAGGTCGAGAAGGAAAT+TGG | - | chr4.1:10558278-10558297 | MS.gene57322:intron | 45.0% | |
| GGATGCAAACATGCACGTAA+AGG | + | chr4.1:10558777-10558796 | None:intergenic | 45.0% | |
| GTCATGTGGTACAGTGAACA+GGG | - | chr4.1:10562621-10562640 | MS.gene57322:intron | 45.0% | |
| GTTGCGTACCCATATCCATA+AGG | + | chr4.1:10562986-10563005 | None:intergenic | 45.0% | |
| TAGTTTCTGCCATGCTCATG+AGG | + | chr4.1:10561426-10561445 | None:intergenic | 45.0% | |
| TGAAACTGAAGCTGTTCAGG+AGG | - | chr4.1:10562702-10562721 | MS.gene57322:intron | 45.0% | |
| TGATTATGCATGCACACCAG+AGG | - | chr4.1:10562579-10562598 | MS.gene57322:CDS | 45.0% | |
| TGCAAACATGCACGTAAAGG+AGG | + | chr4.1:10558774-10558793 | None:intergenic | 45.0% | |
| TGCGTACCCATATCCATAAG+GGG | + | chr4.1:10562984-10563003 | None:intergenic | 45.0% | |
| TGCTTCTCAGGAAAACAAGG+AGG | - | chr4.1:10558662-10558681 | MS.gene57322:CDS | 45.0% | |
| TGTTCTGTCTGTCAAACCAG+GGG | - | chr4.1:10559365-10559384 | MS.gene57322:intron | 45.0% | |
| TTCTCAGGAAAACAAGGAGG+AGG | - | chr4.1:10558665-10558684 | MS.gene57322:CDS | 45.0% | |
| TTGGGCAAATGACACAGTAG+AGG | + | chr4.1:10561600-10561619 | None:intergenic | 45.0% | |
| TTTGGTCTAACACGGTGACA+GGG | + | chr4.1:10559201-10559220 | None:intergenic | 45.0% | |
| ! | AAGGAAATTGGCTCCGTTCA+AGG | - | chr4.1:10558290-10558309 | MS.gene57322:CDS | 45.0% |
| ! | AGGCTTTTCTCAAACTCCAC+AGG | + | chr4.1:10561957-10561976 | None:intergenic | 45.0% |
| ! | ATGCGGAGGTATAAATGCTC+AGG | - | chr4.1:10559682-10559701 | MS.gene57322:intron | 45.0% |
| ! | CCATAAGGGGAGTACATGTA+AGG | + | chr4.1:10562971-10562990 | None:intergenic | 45.0% |
| ! | GAGACAGCTTGTGGTTCTTT+TGG | - | chr4.1:10561497-10561516 | MS.gene57322:intron | 45.0% |
| ! | GGTGACTTGTAGACCTGATA+AGG | - | chr4.1:10561870-10561889 | MS.gene57322:intron | 45.0% |
| ! | TAAGGGGAGTACATGTAAGG+GGG | + | chr4.1:10562968-10562987 | None:intergenic | 45.0% |
| ! | TACATGTAAGGGGGAGCATA+AGG | + | chr4.1:10562959-10562978 | None:intergenic | 45.0% |
| ! | TTTAGTGAGGTATCACACGG+AGG | - | chr4.1:10561192-10561211 | MS.gene57322:intron | 45.0% |
| !! | ATAGCAGCTTTGAGATCAGC+TGG | + | chr4.1:10560025-10560044 | None:intergenic | 45.0% |
| !! | CCATTTTTCCCTCTTAGACC+GGG | - | chr4.1:10559317-10559336 | MS.gene57322:intron | 45.0% |
| !! | TAGCAGCTTTGAGATCAGCT+GGG | + | chr4.1:10560024-10560043 | None:intergenic | 45.0% |
| !!! | GCCATTTTTCCCTCTTAGAC+CGG | - | chr4.1:10559316-10559335 | MS.gene57322:intron | 45.0% |
| AAACCAGGGGTCGCAGAATT+TGG | - | chr4.1:10559957-10559976 | MS.gene57322:intron | 50.0% | |
| AAACTAAGGCCCGGTCTAAG+AGG | + | chr4.1:10559329-10559348 | None:intergenic | 50.0% | |
| AACAACAGCTGCACACCCTT+TGG | + | chr4.1:10561627-10561646 | None:intergenic | 50.0% | |
| AACCAGGGGTCGCAGAATTT+GGG | - | chr4.1:10559958-10559977 | MS.gene57322:intron | 50.0% | |
| AACTAAGGCCCGGTCTAAGA+GGG | + | chr4.1:10559328-10559347 | None:intergenic | 50.0% | |
| AATGGCATCCCTCATGAGCA+TGG | - | chr4.1:10561414-10561433 | MS.gene57322:intron | 50.0% | |
| ACATGGCATATGGCTTCAGG+AGG | - | chr4.1:10562933-10562952 | MS.gene57322:intron | 50.0% | |
| AGTATGTGTGAGAAGGCCTG+TGG | - | chr4.1:10561938-10561957 | MS.gene57322:intron | 50.0% | |
| ATCGAGCTCCTTCATACCAC+CGG | + | chr4.1:10558198-10558217 | None:intergenic | 50.0% | |
| ATGCATTTCACGAAGAGCGG+CGG | + | chr4.1:10558258-10558277 | None:intergenic | 50.0% | |
| ATTCCACAACGCTGTAGTGC+TGG | - | chr4.1:10559598-10559617 | MS.gene57322:intron | 50.0% | |
| CATTTGCCCAACGTGCCAAA+GGG | - | chr4.1:10561609-10561628 | MS.gene57322:intron | 50.0% | |
| CCAGGAACATTGGTCCTCTT+AGG | + | chr4.1:10562878-10562897 | None:intergenic | 50.0% | |
| CCCGGTCTAAGAGGGAAAAA+TGG | + | chr4.1:10559320-10559339 | None:intergenic | 50.0% | |
| CCTAAGAGGACCAATGTTCC+TGG | - | chr4.1:10562875-10562894 | MS.gene57322:intron | 50.0% | |
| CGCATTTACTGTCCTCTACG+TGG | - | chr4.1:10559108-10559127 | MS.gene57322:intron | 50.0% | |
| GACACTCGCTATAGCGTAGA+CGG | + | chr4.1:10559510-10559529 | None:intergenic | 50.0% | |
| GATTTCAGGCTGAGCTGCAT+AGG | - | chr4.1:10560920-10560939 | MS.gene57322:intron | 50.0% | |
| GCTGACCAAACTTGTCTGTC+AGG | + | chr4.1:10562654-10562673 | None:intergenic | 50.0% | |
| GTTGACTGCAACTAGGTCAG+TGG | - | chr4.1:10561572-10561591 | MS.gene57322:intron | 50.0% | |
| GTTTCCAGGTTCTGCCTAAG+AGG | - | chr4.1:10562861-10562880 | MS.gene57322:intron | 50.0% | |
| TCATTTGCCCAACGTGCCAA+AGG | - | chr4.1:10561608-10561627 | MS.gene57322:intron | 50.0% | |
| TCTCCGCTCACAACCAATGA+AGG | + | chr4.1:10560860-10560879 | None:intergenic | 50.0% | |
| TGAAGGAGCTCGATGAGATG+AGG | - | chr4.1:10558204-10558223 | MS.gene57322:intron | 50.0% | |
| TGAGAAGCAGCTACAGAAGC+AGG | + | chr4.1:10558651-10558670 | None:intergenic | 50.0% | |
| TGCACGTAAAGGAGGAACCA+TGG | + | chr4.1:10558766-10558785 | None:intergenic | 50.0% | |
| TGCTTCTGTAGCTGCTTCTC+AGG | - | chr4.1:10558650-10558669 | MS.gene57322:CDS | 50.0% | |
| ! | AAGTGTTGCTGCACTTCCTC+TGG | + | chr4.1:10562598-10562617 | None:intergenic | 50.0% |
| ! | AGGCCTTCATTGGTTGTGAG+CGG | - | chr4.1:10560854-10560873 | MS.gene57322:intron | 50.0% |
| ! | CGATTTGGCCTTCTGTACCT+TGG | + | chr4.1:10563139-10563158 | None:intergenic | 50.0% |
| ! | GAAGAGCATGAGGTTTACGG+AGG | - | chr4.1:10558110-10558129 | MS.gene57322:CDS | 50.0% |
| !! | AATGGGCTGAAACTAAGGCC+CGG | + | chr4.1:10559338-10559357 | None:intergenic | 50.0% |
| !! | GTGCAGCTGTTGTTTCCCTT+TGG | - | chr4.1:10561633-10561652 | MS.gene57322:intron | 50.0% |
| !!! | GTGGGCCACTGGTGTTTTTT+AGG | - | chr4.1:10561126-10561145 | MS.gene57322:intron | 50.0% |
| AATCCCAGACGTGGCTGAGA+TGG | - | chr4.1:10558136-10558155 | MS.gene57322:intron | 55.0% | |
| ACAAGGAGGAGGCAGATGCT+AGG | - | chr4.1:10558676-10558695 | MS.gene57322:CDS | 55.0% | |
| ACCAGGGGTCGCAGAATTTG+GGG | - | chr4.1:10559959-10559978 | MS.gene57322:intron | 55.0% | |
| CAAACTGCAGGAAGGCTCCA+AGG | - | chr4.1:10563119-10563138 | MS.gene57322:CDS | 55.0% | |
| CAACTGGAGGAGACAGCTTG+TGG | - | chr4.1:10561488-10561507 | MS.gene57322:intron | 55.0% | |
| CGATGAAGCCGGTGGTATGA+AGG | - | chr4.1:10558187-10558206 | MS.gene57322:intron | 55.0% | |
| CTGTCTGTCAAACCAGGGGT+CGG | - | chr4.1:10559369-10559388 | MS.gene57322:intron | 55.0% | |
| CTTCCATCTCAGCCACGTCT+GGG | + | chr4.1:10558142-10558161 | None:intergenic | 55.0% | |
| GGAAGGCTCCAAGGTACAGA+AGG | - | chr4.1:10563128-10563147 | MS.gene57322:CDS | 55.0% | |
| TGCACACCCTTTGGCACGTT+GGG | + | chr4.1:10561618-10561637 | None:intergenic | 55.0% | |
| TGGTCCTCTTAGGCAGAACC+TGG | + | chr4.1:10562868-10562887 | None:intergenic | 55.0% | |
| !! | CATACCACCGGCTTCATCGT+CGG | + | chr4.1:10558186-10558205 | None:intergenic | 55.0% |
| AAAGCAGTTTCGCCGACCCC+TGG | + | chr4.1:10559384-10559403 | None:intergenic | 60.0% | |
| ACCCCAAATTCTGCGACCCC+TGG | + | chr4.1:10559963-10559982 | None:intergenic | 60.0% | |
| CCACCAGCACTACAGCGTTG+TGG | + | chr4.1:10559604-10559623 | None:intergenic | 60.0% | |
| CCAGACGTGGCTGAGATGGA+AGG | - | chr4.1:10558140-10558159 | MS.gene57322:intron | 60.0% | |
| CCTTCCATCTCAGCCACGTC+TGG | + | chr4.1:10558143-10558162 | None:intergenic | 60.0% | |
| CGGAGGAGAAATCCCAGACG+TGG | - | chr4.1:10558127-10558146 | MS.gene57322:CDS | 60.0% | |
| CTGCACACCCTTTGGCACGT+TGG | + | chr4.1:10561619-10561638 | None:intergenic | 60.0% | |
| ! | CCACAACGCTGTAGTGCTGG+TGG | - | chr4.1:10559601-10559620 | MS.gene57322:intron | 60.0% |
| ! | GTATTTTGCGGGTGGGCCAC+TGG | - | chr4.1:10561115-10561134 | MS.gene57322:intron | 60.0% |
| !! | GAGGCGCCGCTTGAAGGAAA+TGG | - | chr4.1:10558223-10558242 | MS.gene57322:intron | 60.0% |
| !! | TGAGATGAGGCGCCGCTTGA+AGG | - | chr4.1:10558217-10558236 | MS.gene57322:intron | 60.0% |
| !! | ACCACCGGCTTCATCGTCGG+CGG | + | chr4.1:10558183-10558202 | None:intergenic | 65.0% |
| TCCGCCGCCGACGATGAAGC+CGG | - | chr4.1:10558176-10558195 | MS.gene57322:intron | 70.0% | |
| ! | ACCGGCTTCATCGTCGGCGG+CGG | + | chr4.1:10558180-10558199 | None:intergenic | 70.0% |
| GCCGCCGACGATGAAGCCGG+TGG | - | chr4.1:10558179-10558198 | MS.gene57322:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 10558101 | 10563177 | 10558101 | ID=MS.gene57322 |
| chr4.1 | mRNA | 10558101 | 10563177 | 10558101 | ID=MS.gene57322.t1;Parent=MS.gene57322 |
| chr4.1 | exon | 10562967 | 10563177 | 10562967 | ID=MS.gene57322.t1.exon1;Parent=MS.gene57322.t1 |
| chr4.1 | CDS | 10562967 | 10563177 | 10562967 | ID=cds.MS.gene57322.t1;Parent=MS.gene57322.t1 |
| chr4.1 | exon | 10562562 | 10562632 | 10562562 | ID=MS.gene57322.t1.exon2;Parent=MS.gene57322.t1 |
| chr4.1 | CDS | 10562562 | 10562632 | 10562562 | ID=cds.MS.gene57322.t1;Parent=MS.gene57322.t1 |
| chr4.1 | exon | 10558510 | 10558701 | 10558510 | ID=MS.gene57322.t1.exon3;Parent=MS.gene57322.t1 |
| chr4.1 | CDS | 10558510 | 10558701 | 10558510 | ID=cds.MS.gene57322.t1;Parent=MS.gene57322.t1 |
| chr4.1 | exon | 10558282 | 10558409 | 10558282 | ID=MS.gene57322.t1.exon4;Parent=MS.gene57322.t1 |
| chr4.1 | CDS | 10558282 | 10558409 | 10558282 | ID=cds.MS.gene57322.t1;Parent=MS.gene57322.t1 |
| chr4.1 | exon | 10558101 | 10558149 | 10558101 | ID=MS.gene57322.t1.exon5;Parent=MS.gene57322.t1 |
| chr4.1 | CDS | 10558101 | 10558149 | 10558101 | ID=cds.MS.gene57322.t1;Parent=MS.gene57322.t1 |
| Gene Sequence |
| Protein sequence |
