Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28048.t1 | XP_013446771.1 | 100 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.70E-102 | 382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28048.t1 | Q9LX90 | 71.1 | 218 | 58 | 2 | 1 | 215 | 1 | 216 | 6.0e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28048.t1 | B7FID7 | 100.0 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 1.2e-102 | 382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030837 | MS.gene28048 | PPI |
| MS.gene28048 | MS.gene09287 | PPI |
| MS.gene28048 | MS.gene023503 | PPI |
| MS.gene28048 | MS.gene08957 | PPI |
| MS.gene28048 | MS.gene034607 | PPI |
| MS.gene28048 | MS.gene57322 | PPI |
| MS.gene28048 | MS.gene061807 | PPI |
| MS.gene28048 | MS.gene39195 | PPI |
| MS.gene28048 | MS.gene46475 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28048.t1 | MTR_8g089990 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 6.26e-161 | 443 |
| MS.gene28048.t1 | MTR_4g094260 | 72.222 | 198 | 49 | 3 | 22 | 216 | 5 | 199 | 9.32e-95 | 275 |
| MS.gene28048.t1 | MTR_1g073000 | 69.730 | 185 | 48 | 4 | 1 | 177 | 1 | 185 | 2.39e-87 | 256 |
| MS.gene28048.t1 | MTR_1g049070 | 60.150 | 133 | 47 | 2 | 83 | 215 | 24 | 150 | 1.52e-45 | 148 |
| MS.gene28048.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 124 | 265 | 6.61e-42 | 143 |
| MS.gene28048.t1 | MTR_1g069140 | 54.362 | 149 | 54 | 3 | 51 | 192 | 133 | 274 | 7.99e-42 | 143 |
| MS.gene28048.t1 | MTR_3g028140 | 32.121 | 165 | 98 | 4 | 37 | 188 | 454 | 617 | 9.74e-17 | 78.6 |
| MS.gene28048.t1 | MTR_3g028140 | 36.154 | 130 | 74 | 4 | 37 | 158 | 454 | 582 | 4.54e-14 | 70.9 |
| MS.gene28048.t1 | MTR_8g037000 | 34.091 | 132 | 85 | 2 | 34 | 164 | 585 | 715 | 8.59e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28048.t1 | AT5G10350 | 79.358 | 218 | 40 | 2 | 1 | 215 | 1 | 216 | 1.07e-123 | 349 |
| MS.gene28048.t1 | AT5G65260 | 78.182 | 220 | 42 | 2 | 1 | 215 | 1 | 219 | 1.51e-122 | 346 |
| MS.gene28048.t1 | AT5G10350 | 78.922 | 204 | 38 | 2 | 1 | 201 | 1 | 202 | 5.43e-114 | 324 |
| MS.gene28048.t1 | AT5G51120 | 65.934 | 182 | 54 | 4 | 36 | 215 | 52 | 227 | 6.74e-81 | 241 |
| MS.gene28048.t1 | AT5G51120 | 54.338 | 219 | 56 | 4 | 36 | 215 | 52 | 265 | 6.12e-73 | 222 |
| MS.gene28048.t1 | AT5G51120 | 69.014 | 142 | 37 | 3 | 76 | 215 | 6 | 142 | 2.55e-64 | 196 |
| MS.gene28048.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene28048.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene28048.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene28048.t1 | AT5G10350 | 85.106 | 94 | 14 | 0 | 122 | 215 | 2 | 95 | 6.80e-53 | 165 |
| MS.gene28048.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 467 | 545 | 2.09e-12 | 65.9 |
| MS.gene28048.t1 | AT3G12640 | 39.241 | 79 | 47 | 1 | 83 | 160 | 475 | 553 | 2.41e-12 | 65.9 |
Find 72 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTACTCCCCTTATGGATA+TGG | 0.236806 | 4.4:-10983265 | MS.gene28048:CDS |
| CCTTACATGTACTCCCCTTA+TGG | 0.286031 | 4.4:-10983271 | MS.gene28048:CDS |
| TGTTGAAACTGAAGCTGTTC+AGG | 0.288259 | 4.4:-10983540 | MS.gene28048:CDS |
| CCTTCCATCTCAGCCACGTC+TGG | 0.288464 | 4.4:+10988253 | None:intergenic |
| GCTAAGGTCGAGAAGGAAAT+TGG | 0.324391 | 4.4:-10988115 | MS.gene28048:CDS |
| GAAGAAGAGCATGAGGTTTA+CGG | 0.370305 | 4.4:-10988286 | MS.gene28048:CDS |
| GGACGATATTGTTTCATTCC+AGG | 0.377330 | 4.4:+10983346 | None:intergenic |
| CATATGAAAATCTAATAGTA+TGG | 0.377476 | 4.4:+10983073 | None:intergenic |
| CCTAAGAGGACCAATGTTCC+TGG | 0.382849 | 4.4:-10983364 | MS.gene28048:CDS |
| GCAATTCAGATTCAGATAAC+AGG | 0.397844 | 4.4:+10983510 | None:intergenic |
| CTTACATGGCATATGGCTTC+AGG | 0.398490 | 4.4:-10983309 | MS.gene28048:CDS |
| AGTCATGTGGTACAGTGAAC+AGG | 0.398603 | 4.4:-10983619 | MS.gene28048:CDS |
| TCCACATAAGCAAAACCTTT+AGG | 0.401589 | 4.4:+10983566 | None:intergenic |
| TTCAATCCTTACATGGCATA+TGG | 0.408319 | 4.4:-10983316 | MS.gene28048:CDS |
| CCATAAGGGGAGTACATGTA+AGG | 0.425661 | 4.4:+10983271 | None:intergenic |
| TGCTTCTGTAGCTGCTTCTC+AGG | 0.427087 | 4.4:-10987668 | MS.gene28048:CDS |
| TAGTATGGCATGTAACGATT+TGG | 0.431577 | 4.4:+10983088 | None:intergenic |
| CCAGGAACATTGGTCCTCTT+AGG | 0.432535 | 4.4:+10983364 | None:intergenic |
| AAGGAAATTGGCTCCGTTCA+AGG | 0.432850 | 4.4:-10988103 | MS.gene28048:intron |
| GTTTCCAGGTTCTGCCTAAG+AGG | 0.441058 | 4.4:-10983378 | MS.gene28048:intron |
| TGAGATGAGGCGCCGCTTGA+AGG | 0.443239 | 4.4:-10988176 | MS.gene28048:CDS |
| CTTCTTCCATTTCCTTCAAG+CGG | 0.444637 | 4.4:+10988164 | None:intergenic |
| AAGTGTTGCTGCACTTCCTC+TGG | 0.447138 | 4.4:+10983644 | None:intergenic |
| GAGGCGCCGCTTGAAGGAAA+TGG | 0.451064 | 4.4:-10988170 | MS.gene28048:CDS |
| ACTATCCTGACAGACAAGTT+TGG | 0.451284 | 4.4:-10983593 | MS.gene28048:CDS |
| CGATTTGGCCTTCTGTACCT+TGG | 0.467595 | 4.4:+10983103 | None:intergenic |
| CTGAAGCCATATGCCATGTA+AGG | 0.472571 | 4.4:+10983310 | None:intergenic |
| GACAAGTTTGGTCAGCCTAA+AGG | 0.475002 | 4.4:-10983581 | MS.gene28048:CDS |
| AATCCCAGACGTGGCTGAGA+TGG | 0.477332 | 4.4:-10988257 | MS.gene28048:CDS |
| CGATGAAGCCGGTGGTATGA+AGG | 0.484886 | 4.4:-10988206 | MS.gene28048:CDS |
| GCTGACCAAACTTGTCTGTC+AGG | 0.485268 | 4.4:+10983588 | None:intergenic |
| GAATGAAACAATATCGTCCT+AGG | 0.485505 | 4.4:-10983342 | MS.gene28048:CDS |
| TGTACTCCCCTTATGGATAT+GGG | 0.497226 | 4.4:-10983264 | MS.gene28048:intron |
| TTGCGTACCCATATCCATAA+GGG | 0.499244 | 4.4:+10983257 | None:intergenic |
| GTTGCGTACCCATATCCATA+AGG | 0.507988 | 4.4:+10983256 | None:intergenic |
| TGAGAAGCAGCTACAGAAGC+AGG | 0.509186 | 4.4:+10987670 | None:intergenic |
| ACCGGCTTCATCGTCGGCGG+CGG | 0.522837 | 4.4:+10988216 | None:intergenic |
| CTTCCATCTCAGCCACGTCT+GGG | 0.525363 | 4.4:+10988254 | None:intergenic |
| ATCGAGCTCCTTCATACCAC+CGG | 0.547125 | 4.4:+10988198 | None:intergenic |
| ATCATTATGAAAACCTTGAA+CGG | 0.558489 | 4.4:+10988090 | None:intergenic |
| AGCTGCTTCTCAGGAAAACA+AGG | 0.560487 | 4.4:-10987659 | MS.gene28048:CDS |
| TTGTTTCATTCCAGGAACAT+TGG | 0.561559 | 4.4:+10983354 | None:intergenic |
| CATAAGGGGAGTACATGTAA+GGG | 0.562096 | 4.4:+10983272 | None:intergenic |
| GATGGATGAAGAAGAGCATG+AGG | 0.564377 | 4.4:-10988293 | MS.gene28048:CDS |
| TCCGCCGCCGACGATGAAGC+CGG | 0.571081 | 4.4:-10988217 | MS.gene28048:CDS |
| CATACCACCGGCTTCATCGT+CGG | 0.574346 | 4.4:+10988210 | None:intergenic |
| TTCTCAGGAAAACAAGGAGG+AGG | 0.576078 | 4.4:-10987653 | MS.gene28048:CDS |
| CCAGACGTGGCTGAGATGGA+AGG | 0.591120 | 4.4:-10988253 | MS.gene28048:CDS |
| AGCATGCATTTCACGAAGAG+CGG | 0.591158 | 4.4:+10988135 | None:intergenic |
| TCTTCGTGAAATGCATGCTA+AGG | 0.591257 | 4.4:-10988131 | MS.gene28048:CDS |
| TAGGCGATTCAATCCTTACA+TGG | 0.592543 | 4.4:-10983323 | MS.gene28048:CDS |
| GGAAGGCTCCAAGGTACAGA+AGG | 0.594290 | 4.4:-10983111 | MS.gene28048:CDS |
| ATGCATTTCACGAAGAGCGG+CGG | 0.600008 | 4.4:+10988138 | None:intergenic |
| ACAAGGAGGAGGCAGATGCT+AGG | 0.602973 | 4.4:-10987642 | MS.gene28048:CDS |
| CAAACTGCAGGAAGGCTCCA+AGG | 0.609497 | 4.4:-10983120 | MS.gene28048:intron |
| TTATCTGAATCTGAATTGCA+TGG | 0.610170 | 4.4:-10983506 | MS.gene28048:CDS |
| TGAAGGAGCTCGATGAGATG+AGG | 0.616758 | 4.4:-10988189 | MS.gene28048:CDS |
| GTCATGTGGTACAGTGAACA+GGG | 0.623456 | 4.4:-10983618 | MS.gene28048:CDS |
| ATGTAAGGATTGAATCGCCT+AGG | 0.636374 | 4.4:+10983325 | None:intergenic |
| CAGCAACACTTTCAGTCATG+TGG | 0.638722 | 4.4:-10983632 | MS.gene28048:CDS |
| AATGCATGCTAAGGTCGAGA+AGG | 0.646081 | 4.4:-10988122 | MS.gene28048:CDS |
| CGGAGGAGAAATCCCAGACG+TGG | 0.649618 | 4.4:-10988266 | MS.gene28048:CDS |
| TGAAACTGAAGCTGTTCAGG+AGG | 0.649806 | 4.4:-10983537 | MS.gene28048:CDS |
| TGCGTACCCATATCCATAAG+GGG | 0.658223 | 4.4:+10983258 | None:intergenic |
| GCCGCCGACGATGAAGCCGG+TGG | 0.660392 | 4.4:-10988214 | MS.gene28048:CDS |
| ATAAGGGGAGTACATGTAAG+GGG | 0.666152 | 4.4:+10983273 | None:intergenic |
| ACCACCGGCTTCATCGTCGG+CGG | 0.666758 | 4.4:+10988213 | None:intergenic |
| TGATTATGCATGCACACCAG+AGG | 0.670537 | 4.4:-10983660 | MS.gene28048:CDS |
| GAAGAGCATGAGGTTTACGG+AGG | 0.680084 | 4.4:-10988283 | MS.gene28048:CDS |
| ACATGGCATATGGCTTCAGG+AGG | 0.690213 | 4.4:-10983306 | MS.gene28048:CDS |
| TGCTTCTCAGGAAAACAAGG+AGG | 0.704124 | 4.4:-10987656 | MS.gene28048:CDS |
| TAAGGGGAGTACATGTAAGG+GGG | 0.709420 | 4.4:+10983274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAAAATTAAAATCAAA+AGG | - | chr4.4:10983984-10984003 | MS.gene28048:intron | 10.0% |
| !! | TCAAAAAATTAAAATCAAAA+GGG | - | chr4.4:10983985-10984004 | MS.gene28048:intron | 10.0% |
| !!! | ATTTTTTATTGTTTTTCAAT+CGG | - | chr4.4:10983796-10983815 | MS.gene28048:intron | 10.0% |
| !! | ACAATTATTAATTGTAAGTT+TGG | - | chr4.4:10985257-10985276 | MS.gene28048:intron | 15.0% |
| !! | ATATAAATACAACAGATATT+GGG | + | chr4.4:10984236-10984255 | None:intergenic | 15.0% |
| !! | ATTAATCGAAAGATATTATT+AGG | - | chr4.4:10984818-10984837 | MS.gene28048:intron | 15.0% |
| !!! | ATTTTAATTTTTTGATGATG+AGG | + | chr4.4:10983980-10983999 | None:intergenic | 15.0% |
| !!! | CATTTATGATCTTTTTAATA+CGG | + | chr4.4:10987392-10987411 | None:intergenic | 15.0% |
| !!! | TATATTTTGCATTTTTCAAA+AGG | - | chr4.4:10987439-10987458 | MS.gene28048:intron | 15.0% |
| !!! | TATTTATAATTGACTTTTTG+TGG | - | chr4.4:10988216-10988235 | MS.gene28048:CDS | 15.0% |
| !!! | TGTCTTTAAAGTTTAAATTA+AGG | + | chr4.4:10985234-10985253 | None:intergenic | 15.0% |
| !!! | TTGTAAGATATTTTAGAAAT+GGG | + | chr4.4:10986852-10986871 | None:intergenic | 15.0% |
| !!! | TTTACTTTTTTTTCTTGATA+AGG | + | chr4.4:10984956-10984975 | None:intergenic | 15.0% |
| !!! | TTTGTAAGATATTTTAGAAA+TGG | + | chr4.4:10986853-10986872 | None:intergenic | 15.0% |
| !!! | TTTTGTATGATAAATGAATT+GGG | - | chr4.4:10987615-10987634 | MS.gene28048:intron | 15.0% |
| !!! | TTTTGTTGTTATTAAATTGT+GGG | + | chr4.4:10984849-10984868 | None:intergenic | 15.0% |
| !!! | TTTTTGTATGATAAATGAAT+TGG | - | chr4.4:10987614-10987633 | MS.gene28048:intron | 15.0% |
| !! | AAAAACATACTTTCAATTGA+CGG | + | chr4.4:10987896-10987915 | None:intergenic | 20.0% |
| !! | AAAAATTAAAATCAAAAGGG+CGG | - | chr4.4:10983988-10984007 | MS.gene28048:intron | 20.0% |
| !! | AAAGAAATGAGAAAAGAAAA+AGG | - | chr4.4:10986479-10986498 | MS.gene28048:intron | 20.0% |
| !! | AAATTGATGAAATAGATAGT+AGG | - | chr4.4:10984096-10984115 | MS.gene28048:intron | 20.0% |
| !! | AAATTGTACAAAGTTTATGA+AGG | + | chr4.4:10986941-10986960 | None:intergenic | 20.0% |
| !! | AGAAAGAACATTGAATAAAT+GGG | + | chr4.4:10985052-10985071 | None:intergenic | 20.0% |
| !! | ATACGCTATTTATTACAAAA+TGG | + | chr4.4:10984624-10984643 | None:intergenic | 20.0% |
| !! | ATTAAAGATAGCTTGATTAA+CGG | - | chr4.4:10983570-10983589 | MS.gene28048:CDS | 20.0% |
| !! | CAAGAAAAAAAAGTAAAAGT+AGG | - | chr4.4:10984959-10984978 | MS.gene28048:intron | 20.0% |
| !! | GATATAAATACAACAGATAT+TGG | + | chr4.4:10984237-10984256 | None:intergenic | 20.0% |
| !! | TATAAATAACAATTGAGCTT+TGG | + | chr4.4:10988204-10988223 | None:intergenic | 20.0% |
| !! | TATTTACCTAATCAACTTAA+AGG | - | chr4.4:10983886-10983905 | MS.gene28048:intron | 20.0% |
| !! | TCATAAACTTTGTACAATTT+AGG | - | chr4.4:10986941-10986960 | MS.gene28048:intron | 20.0% |
| !! | TTTAATAACAACAAAAGTCA+CGG | - | chr4.4:10984853-10984872 | MS.gene28048:intron | 20.0% |
| !! | TTTCTTCTAATAATTGTACA+CGG | - | chr4.4:10985103-10985122 | MS.gene28048:intron | 20.0% |
| !!! | AAACATTTCAGTTTTATTGA+TGG | - | chr4.4:10983480-10983499 | MS.gene28048:intron | 20.0% |
| !!! | AAACTGCTTTCTTTTAATAA+TGG | - | chr4.4:10984452-10984471 | MS.gene28048:intron | 20.0% |
| !!! | AAATCTGATTTGAGAAAAAA+AGG | + | chr4.4:10986009-10986028 | None:intergenic | 20.0% |
| !!! | ATATTTTAGAAATGGGAAAA+AGG | + | chr4.4:10986845-10986864 | None:intergenic | 20.0% |
| !!! | ATGAATTTTACAGTTCAAAA+TGG | - | chr4.4:10987283-10987302 | MS.gene28048:intron | 20.0% |
| !!! | ATTTGTAGTTTTTGATGATA+CGG | - | chr4.4:10987968-10987987 | MS.gene28048:intron | 20.0% |
| !!! | CTCTTTTTAACATTTTGATT+GGG | - | chr4.4:10983669-10983688 | MS.gene28048:intron | 20.0% |
| !!! | CTTTTGTTGTTATTAAATTG+TGG | + | chr4.4:10984850-10984869 | None:intergenic | 20.0% |
| !!! | GAAAAATAAAGAACATTTTG+AGG | - | chr4.4:10986501-10986520 | MS.gene28048:intron | 20.0% |
| !!! | GATTTTTAATAGTGTGATTA+TGG | - | chr4.4:10987583-10987602 | MS.gene28048:intron | 20.0% |
| !!! | TCTCTTTTTAACATTTTGAT+TGG | - | chr4.4:10983668-10983687 | MS.gene28048:intron | 20.0% |
| !!! | TGAATTTTACAGTTCAAAAT+GGG | - | chr4.4:10987284-10987303 | MS.gene28048:intron | 20.0% |
| !!! | TTTGTTTTTTGTTTTCAGAT+AGG | + | chr4.4:10984999-10985018 | None:intergenic | 20.0% |
| ! | AAGTAAAAACAAGAAAGTCA+AGG | - | chr4.4:10985296-10985315 | MS.gene28048:intron | 25.0% |
| ! | AATTATGAGATAAAGACCAA+AGG | + | chr4.4:10986770-10986789 | None:intergenic | 25.0% |
| ! | AATTTGTATACAACGGATAT+TGG | + | chr4.4:10984208-10984227 | None:intergenic | 25.0% |
| ! | AGACAGAACATTGAATAAAT+GGG | + | chr4.4:10984413-10984432 | None:intergenic | 25.0% |
| ! | AGCATACAGAAATTTAAATG+AGG | + | chr4.4:10988149-10988168 | None:intergenic | 25.0% |
| ! | ATCATTATGAAAACCTTGAA+CGG | + | chr4.4:10983289-10983308 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGACCAAA+GGG | + | chr4.4:10986769-10986788 | None:intergenic | 25.0% |
| ! | ATTTGTATACAACGGATATT+GGG | + | chr4.4:10984207-10984226 | None:intergenic | 25.0% |
| ! | CAGAAAGAACATTGAATAAA+TGG | + | chr4.4:10985053-10985072 | None:intergenic | 25.0% |
| ! | GAATAGATAATGAAATCAGT+TGG | + | chr4.4:10986907-10986926 | None:intergenic | 25.0% |
| ! | GGTGAAAAATTTGTATACAA+CGG | + | chr4.4:10984215-10984234 | None:intergenic | 25.0% |
| ! | TAGTTCGTAATAACTAAATC+AGG | + | chr4.4:10983918-10983937 | None:intergenic | 25.0% |
| ! | TATATATATACTGCAGTATG+CGG | - | chr4.4:10984750-10984769 | MS.gene28048:intron | 25.0% |
| ! | TGTTGTTATGAAATTTAGTG+AGG | - | chr4.4:10986297-10986316 | MS.gene28048:intron | 25.0% |
| ! | TTCATATCCAACTAAACAAT+AGG | + | chr4.4:10983856-10983875 | None:intergenic | 25.0% |
| ! | TTGTAATAAATAGCGTATCA+CGG | - | chr4.4:10984626-10984645 | MS.gene28048:intron | 25.0% |
| !! | ATGTTAACATTGTATTTTGC+GGG | - | chr4.4:10986221-10986240 | MS.gene28048:intron | 25.0% |
| !! | GATGTTAACATTGTATTTTG+CGG | - | chr4.4:10986220-10986239 | MS.gene28048:intron | 25.0% |
| !! | GATTCGAGTTAATTCAATTA+AGG | + | chr4.4:10983369-10983388 | None:intergenic | 25.0% |
| !! | TATAGGCAAACTTCTTTTTA+TGG | - | chr4.4:10987127-10987146 | MS.gene28048:intron | 25.0% |
| !! | TCAAATCAGATTTGTTTCAA+TGG | - | chr4.4:10986016-10986035 | MS.gene28048:intron | 25.0% |
| !! | TGTTTTCACGTTTATGAATT+AGG | - | chr4.4:10986789-10986808 | MS.gene28048:intron | 25.0% |
| !!! | CTGTACAGTTTTTTTTTGTT+TGG | - | chr4.4:10986102-10986121 | MS.gene28048:intron | 25.0% |
| !!! | GATTTGTTTCAATGGATTTT+AGG | - | chr4.4:10986024-10986043 | MS.gene28048:intron | 25.0% |
| !!! | GGAAATATAATTTTGAAGCT+AGG | + | chr4.4:10983603-10983622 | None:intergenic | 25.0% |
| !!! | TTCCTGATATTTTTTTGTTG+AGG | - | chr4.4:10986813-10986832 | MS.gene28048:intron | 25.0% |
| AAATAGTAGTATGTGTGAGA+AGG | - | chr4.4:10987049-10987068 | MS.gene28048:intron | 30.0% | |
| AAATCACATGGGTACAATAT+TGG | + | chr4.4:10985683-10985702 | None:intergenic | 30.0% | |
| AACATGTTCACCTATAGATA+CGG | + | chr4.4:10985026-10985045 | None:intergenic | 30.0% | |
| AACTGACGATATAGATGATA+TGG | - | chr4.4:10987466-10987485 | MS.gene28048:intron | 30.0% | |
| AATCATGGATCACAAAAAAG+TGG | - | chr4.4:10984531-10984550 | MS.gene28048:intron | 30.0% | |
| ACCAGAATAGAATAATTACG+TGG | + | chr4.4:10985741-10985760 | None:intergenic | 30.0% | |
| ACGAACTAATTTAGTAGTCT+TGG | - | chr4.4:10983930-10983949 | MS.gene28048:intron | 30.0% | |
| AGAAAGTCAAGGATCATAAA+AGG | - | chr4.4:10985307-10985326 | MS.gene28048:intron | 30.0% | |
| AGCCTCAACAAAAAAATATC+AGG | + | chr4.4:10986818-10986837 | None:intergenic | 30.0% | |
| AGGGAAAAATGGCTAAATAA+TGG | + | chr4.4:10984367-10984386 | None:intergenic | 30.0% | |
| ATGAAATAGATAGTAGGCAA+TGG | - | chr4.4:10984102-10984121 | MS.gene28048:intron | 30.0% | |
| ATTTACTTTGTATGATGTCG+CGG | + | chr4.4:10983624-10983643 | None:intergenic | 30.0% | |
| CAAGAATTGCAAAATCACAT+GGG | + | chr4.4:10985694-10985713 | None:intergenic | 30.0% | |
| CAGACAGAACATTGAATAAA+TGG | + | chr4.4:10984414-10984433 | None:intergenic | 30.0% | |
| CATGCTTGCTTATAGATAAA+TGG | + | chr4.4:10985426-10985445 | None:intergenic | 30.0% | |
| CATTTATCTATAAGCAAGCA+TGG | - | chr4.4:10985424-10985443 | MS.gene28048:intron | 30.0% | |
| CATTTGTAACTATTCATGGT+GGG | - | chr4.4:10985934-10985953 | MS.gene28048:intron | 30.0% | |
| CCTAATCAACTTAAAGGATA+AGG | - | chr4.4:10983892-10983911 | MS.gene28048:intron | 30.0% | |
| CGATTAATAATTATGAGTGC+AGG | + | chr4.4:10984806-10984825 | None:intergenic | 30.0% | |
| GAAAGTCAAGGATCATAAAA+GGG | - | chr4.4:10985308-10985327 | MS.gene28048:intron | 30.0% | |
| GTTCTAATGTTTGAAGAGTT+GGG | - | chr4.4:10987214-10987233 | MS.gene28048:intron | 30.0% | |
| TACATACATGTAGAGTGATT+AGG | + | chr4.4:10984041-10984060 | None:intergenic | 30.0% | |
| TAGAATAATTACGTGGAACA+AGG | + | chr4.4:10985734-10985753 | None:intergenic | 30.0% | |
| TCAAGAATTGCAAAATCACA+TGG | + | chr4.4:10985695-10985714 | None:intergenic | 30.0% | |
| TCATGGCTAATTTAAACTCA+AGG | + | chr4.4:10987935-10987954 | None:intergenic | 30.0% | |
| TCCACGTAATTATTCTATTC+TGG | - | chr4.4:10985737-10985756 | MS.gene28048:intron | 30.0% | |
| TGAAGACACATGAATTTCAA+GGG | + | chr4.4:10987693-10987712 | None:intergenic | 30.0% | |
| TGTTCTAATGTTTGAAGAGT+TGG | - | chr4.4:10987213-10987232 | MS.gene28048:intron | 30.0% | |
| TGTTGTGAATTACTACTATG+AGG | - | chr4.4:10987018-10987037 | MS.gene28048:intron | 30.0% | |
| TTATCTGAATCTGAATTGCA+TGG | - | chr4.4:10987870-10987889 | MS.gene28048:intron | 30.0% | |
| TTTGCATCCTATTGTTTAGT+TGG | - | chr4.4:10983846-10983865 | MS.gene28048:intron | 30.0% | |
| ! | AAATTTAGTGAGGTATCACA+CGG | - | chr4.4:10986307-10986326 | MS.gene28048:intron | 30.0% |
| ! | CAAACTTCTTTTTATGGAGT+TGG | - | chr4.4:10987133-10987152 | MS.gene28048:intron | 30.0% |
| ! | GAAGCATTTGTAACTATTCA+TGG | - | chr4.4:10985930-10985949 | MS.gene28048:intron | 30.0% |
| ! | TGAGTATATTGATAACAGGA+CGG | + | chr4.4:10985659-10985678 | None:intergenic | 30.0% |
| ! | TGGTTGAGTATATTGATAAC+AGG | + | chr4.4:10985663-10985682 | None:intergenic | 30.0% |
| !! | CCTTATCCTTTAAGTTGATT+AGG | + | chr4.4:10983895-10983914 | None:intergenic | 30.0% |
| !!! | GCTTGATTTGGTTTTATTGT+TGG | - | chr4.4:10987155-10987174 | MS.gene28048:intron | 30.0% |
| !!! | GTTGTTTTTTGTTTTCAGAG+AGG | + | chr4.4:10985399-10985418 | None:intergenic | 30.0% |
| !!! | TGATTTGGTTTTATTGTTGG+TGG | - | chr4.4:10987158-10987177 | MS.gene28048:intron | 30.0% |
| !!! | TTTTTTAGGCTCATAGTAGA+GGG | - | chr4.4:10986258-10986277 | MS.gene28048:intron | 30.0% |
| AAAAGTCACGGATCATAAAG+GGG | - | chr4.4:10984865-10984884 | MS.gene28048:intron | 35.0% | |
| AAAATTTGTATGCCACGTAG+AGG | + | chr4.4:10984181-10984200 | None:intergenic | 35.0% | |
| AACAAACCAACCGTATCTAT+AGG | - | chr4.4:10985013-10985032 | MS.gene28048:intron | 35.0% | |
| AATGTTCTTTCTGTCAAACC+AGG | - | chr4.4:10985060-10985079 | MS.gene28048:intron | 35.0% | |
| AATTACGTGGAACAAGGAAA+AGG | + | chr4.4:10985728-10985747 | None:intergenic | 35.0% | |
| ACAAAAGTCACGGATCATAA+AGG | - | chr4.4:10984863-10984882 | MS.gene28048:intron | 35.0% | |
| ACTAACAATCTTCAGAGACA+GGG | - | chr4.4:10986132-10986151 | MS.gene28048:intron | 35.0% | |
| AGATGATTCAACTTCACAAC+TGG | - | chr4.4:10986590-10986609 | MS.gene28048:intron | 35.0% | |
| AGGCTTATGTGGCATTTATT+TGG | + | chr4.4:10984277-10984296 | None:intergenic | 35.0% | |
| ATCAGAACACAACTGTCATT+TGG | + | chr4.4:10985544-10985563 | None:intergenic | 35.0% | |
| ATGAGTGAAATGCACAATGA+AGG | - | chr4.4:10987100-10987119 | MS.gene28048:intron | 35.0% | |
| ATGATTCAAACGTGCTGAAT+TGG | + | chr4.4:10983416-10983435 | None:intergenic | 35.0% | |
| ATGTTCTTTCTGTCAAACCA+GGG | - | chr4.4:10985061-10985080 | MS.gene28048:intron | 35.0% | |
| ATTACGTGGAACAAGGAAAA+GGG | + | chr4.4:10985727-10985746 | None:intergenic | 35.0% | |
| ATTAGTTCACACACGCTATT+AGG | - | chr4.4:10985892-10985911 | MS.gene28048:intron | 35.0% | |
| CAAAAGTCACGGATCATAAA+GGG | - | chr4.4:10984864-10984883 | MS.gene28048:intron | 35.0% | |
| CTGAAGACACATGAATTTCA+AGG | + | chr4.4:10987694-10987713 | None:intergenic | 35.0% | |
| CTGATGTGTGAAATAAGGAT+TGG | - | chr4.4:10985559-10985578 | MS.gene28048:intron | 35.0% | |
| CTTGAAATTCATGTGTCTTC+AGG | - | chr4.4:10987692-10987711 | MS.gene28048:intron | 35.0% | |
| GAATGAAACAATATCGTCCT+AGG | - | chr4.4:10988034-10988053 | MS.gene28048:intron | 35.0% | |
| GACGACAAAAAAGAACAAGT+TGG | + | chr4.4:10984144-10984163 | None:intergenic | 35.0% | |
| GAGATCAATGTTGTCAATCA+TGG | - | chr4.4:10984516-10984535 | MS.gene28048:intron | 35.0% | |
| GCAATTCAGATTCAGATAAC+AGG | + | chr4.4:10987869-10987888 | None:intergenic | 35.0% | |
| GCATTTGTAACTATTCATGG+TGG | - | chr4.4:10985933-10985952 | MS.gene28048:intron | 35.0% | |
| GGCATTTATTTGGTCTAACA+CGG | + | chr4.4:10984267-10984286 | None:intergenic | 35.0% | |
| GTATCTATAGGTGAACATGT+TGG | - | chr4.4:10985025-10985044 | MS.gene28048:intron | 35.0% | |
| GTGTTCTGATGTGTGAAATA+AGG | - | chr4.4:10985554-10985573 | MS.gene28048:intron | 35.0% | |
| GTTAATCACGACGATAATCA+TGG | + | chr4.4:10983447-10983466 | None:intergenic | 35.0% | |
| TAACATCCAGCGCTAATTAT+AGG | + | chr4.4:10986207-10986226 | None:intergenic | 35.0% | |
| TACAAGTCACCTAAAGAATG+AGG | + | chr4.4:10986979-10986998 | None:intergenic | 35.0% | |
| TACTAACAATCTTCAGAGAC+AGG | - | chr4.4:10986131-10986150 | MS.gene28048:intron | 35.0% | |
| TAGTATGGCATGTAACGATT+TGG | + | chr4.4:10988291-10988310 | None:intergenic | 35.0% | |
| TATATGCAAGACTCATGTCT+CGG | + | chr4.4:10987558-10987577 | None:intergenic | 35.0% | |
| TCCACATAAGCAAAACCTTT+AGG | + | chr4.4:10987813-10987832 | None:intergenic | 35.0% | |
| TGCAATCTTCCTCATTCTTT+AGG | - | chr4.4:10986967-10986986 | MS.gene28048:intron | 35.0% | |
| TGTCTCTTAACTCCATTATG+TGG | - | chr4.4:10984298-10984317 | MS.gene28048:intron | 35.0% | |
| TGTGAATTACTACTATGAGG+AGG | - | chr4.4:10987021-10987040 | MS.gene28048:intron | 35.0% | |
| TTCAATCCTTACATGGCATA+TGG | - | chr4.4:10988060-10988079 | MS.gene28048:intron | 35.0% | |
| TTGTTTCATTCCAGGAACAT+TGG | + | chr4.4:10988025-10988044 | None:intergenic | 35.0% | |
| ! | ATAATGGAGTTAAGAGACAG+AGG | + | chr4.4:10984297-10984316 | None:intergenic | 35.0% |
| ! | GAATGTCGTCTTTGAAAAGT+AGG | - | chr4.4:10984926-10984945 | MS.gene28048:intron | 35.0% |
| ! | GTGCATTTCACTCATTTTAC+AGG | + | chr4.4:10987095-10987114 | None:intergenic | 35.0% |
| ! | TAACATTGTATTTTGCGGGT+GGG | - | chr4.4:10986225-10986244 | MS.gene28048:intron | 35.0% |
| ! | TTAACATTGTATTTTGCGGG+TGG | - | chr4.4:10986224-10986243 | MS.gene28048:intron | 35.0% |
| !! | CATTTTGAGGAAACTGTGAA+TGG | - | chr4.4:10986514-10986533 | MS.gene28048:intron | 35.0% |
| !! | GAATAAATGGGCTGAAACTA+AGG | + | chr4.4:10984401-10984420 | None:intergenic | 35.0% |
| !! | GACGTCTTTCAATTTTGAAG+CGG | + | chr4.4:10985349-10985368 | None:intergenic | 35.0% |
| !! | TTGTTTTTCAATCGGAACCA+TGG | - | chr4.4:10983804-10983823 | MS.gene28048:intron | 35.0% |
| !! | TTTATGGAGTTGGCTTGATT+TGG | - | chr4.4:10987143-10987162 | MS.gene28048:intron | 35.0% |
| !! | TTTTTAGGCTCATAGTAGAG+GGG | - | chr4.4:10986259-10986278 | MS.gene28048:intron | 35.0% |
| !!! | GTTTTTTAGGCTCATAGTAG+AGG | - | chr4.4:10986257-10986276 | MS.gene28048:intron | 35.0% |
| !!! | TCTGTTTTTTGTCAAACTGC+AGG | - | chr4.4:10988244-10988263 | MS.gene28048:CDS | 35.0% |
| !!! | TTTTTTGTCAAACTGCAGGA+AGG | - | chr4.4:10988248-10988267 | MS.gene28048:CDS | 35.0% |
| AAAGTCACGGATCATAAAGG+GGG | - | chr4.4:10984866-10984885 | MS.gene28048:intron | 40.0% | |
| AAATTCACTAGACGAGCTCA+TGG | + | chr4.4:10987952-10987971 | None:intergenic | 40.0% | |
| AATGTTCTGTCTGTCAAACC+AGG | - | chr4.4:10984421-10984440 | MS.gene28048:intron | 40.0% | |
| ACAACAGTACCAACCTTATC+AGG | + | chr4.4:10987004-10987023 | None:intergenic | 40.0% | |
| ACATCCTCACAAATTCAGAG+AGG | + | chr4.4:10985507-10985526 | None:intergenic | 40.0% | |
| ACCTAGTTGCAGTCAACAAA+AGG | + | chr4.4:10986687-10986706 | None:intergenic | 40.0% | |
| ACTATCCTGACAGACAAGTT+TGG | - | chr4.4:10987783-10987802 | MS.gene28048:intron | 40.0% | |
| ACTTGTAGACCTGATAAGGT+TGG | - | chr4.4:10986992-10987011 | MS.gene28048:intron | 40.0% | |
| ATATATACTGCAGTATGCGG+AGG | - | chr4.4:10984753-10984772 | MS.gene28048:intron | 40.0% | |
| ATATGTCTCACTATGATCGC+AGG | - | chr4.4:10986161-10986180 | MS.gene28048:intron | 40.0% | |
| ATGAGCCTAAAAAACACCAG+TGG | + | chr4.4:10986252-10986271 | None:intergenic | 40.0% | |
| ATGGTATCAAATAGCAGCTG+TGG | + | chr4.4:10984605-10984624 | None:intergenic | 40.0% | |
| ATGTAAGGATTGAATCGCCT+AGG | + | chr4.4:10988054-10988073 | None:intergenic | 40.0% | |
| ATGTACTCCCCTTATGGATA+TGG | - | chr4.4:10988111-10988130 | MS.gene28048:CDS | 40.0% | |
| ATGTTCTGTCTGTCAAACCA+GGG | - | chr4.4:10984422-10984441 | MS.gene28048:intron | 40.0% | |
| ATTTATCCTGTTGAGTGCAG+AGG | - | chr4.4:10985182-10985201 | MS.gene28048:intron | 40.0% | |
| CAGAAACTGAGTCCACATAA+TGG | + | chr4.4:10984313-10984332 | None:intergenic | 40.0% | |
| CTGAATTGGATTGCATGCAA+TGG | + | chr4.4:10983402-10983421 | None:intergenic | 40.0% | |
| CTTCTTCCATTTCCTTCAAG+CGG | + | chr4.4:10983215-10983234 | None:intergenic | 40.0% | |
| GACTTCACAATGACTTTGCA+GGG | - | chr4.4:10987308-10987327 | MS.gene28048:intron | 40.0% | |
| GATACGGATGTTATGTTTCC+AGG | - | chr4.4:10987984-10988003 | MS.gene28048:intron | 40.0% | |
| GGACGATATTGTTTCATTCC+AGG | + | chr4.4:10988033-10988052 | None:intergenic | 40.0% | |
| GGGGGAAAATTCAGAATTAG+TGG | - | chr4.4:10984884-10984903 | MS.gene28048:intron | 40.0% | |
| GTGAAATGCACAATGAAGGA+TGG | - | chr4.4:10987104-10987123 | MS.gene28048:intron | 40.0% | |
| GTGGGAACATTAGGAATTTG+AGG | - | chr4.4:10985952-10985971 | MS.gene28048:intron | 40.0% | |
| TAGGCGATTCAATCCTTACA+TGG | - | chr4.4:10988053-10988072 | MS.gene28048:intron | 40.0% | |
| TATGTCTCACTATGATCGCA+GGG | - | chr4.4:10986162-10986181 | MS.gene28048:intron | 40.0% | |
| TCTTCGTGAAATGCATGCTA+AGG | - | chr4.4:10983245-10983264 | MS.gene28048:intron | 40.0% | |
| TGACTTCACAATGACTTTGC+AGG | - | chr4.4:10987307-10987326 | MS.gene28048:intron | 40.0% | |
| TGATTCAACTTCACAACTGG+AGG | - | chr4.4:10986593-10986612 | MS.gene28048:intron | 40.0% | |
| TGCACAATGAAGGATGGTAT+AGG | - | chr4.4:10987110-10987129 | MS.gene28048:intron | 40.0% | |
| TGCATGCAATGGAGTTGAAT+CGG | + | chr4.4:10983391-10983410 | None:intergenic | 40.0% | |
| TGTACTCCCCTTATGGATAT+GGG | - | chr4.4:10988112-10988131 | MS.gene28048:CDS | 40.0% | |
| TGTTCACCTATAGATACGGT+TGG | + | chr4.4:10985022-10985041 | None:intergenic | 40.0% | |
| TGTTCTTTCTGTCAAACCAG+GGG | - | chr4.4:10985062-10985081 | MS.gene28048:intron | 40.0% | |
| TGTTGAAACTGAAGCTGTTC+AGG | - | chr4.4:10987836-10987855 | MS.gene28048:intron | 40.0% | |
| TTAAGAGACAGAGGCTTATG+TGG | + | chr4.4:10984288-10984307 | None:intergenic | 40.0% | |
| TTGCGTACCCATATCCATAA+GGG | + | chr4.4:10988122-10988141 | None:intergenic | 40.0% | |
| TTTATACCTCTGCACTCAAC+AGG | + | chr4.4:10985191-10985210 | None:intergenic | 40.0% | |
| ! | AAAAGAACAAGTTGGAAGCG+AGG | + | chr4.4:10984136-10984155 | None:intergenic | 40.0% |
| ! | AACATTGTATTTTGCGGGTG+GGG | - | chr4.4:10986226-10986245 | MS.gene28048:intron | 40.0% |
| ! | ACTGTCATTTGGTCTCTGTT+CGG | + | chr4.4:10985533-10985552 | None:intergenic | 40.0% |
| ! | ATAAGGGGAGTACATGTAAG+GGG | + | chr4.4:10988106-10988125 | None:intergenic | 40.0% |
| ! | CATAAGGGGAGTACATGTAA+GGG | + | chr4.4:10988107-10988126 | None:intergenic | 40.0% |
| ! | CTATTCATGGTGGGAACATT+AGG | - | chr4.4:10985943-10985962 | MS.gene28048:intron | 40.0% |
| ! | GAAGAAGAGCATGAGGTTTA+CGG | - | chr4.4:10983090-10983109 | MS.gene28048:CDS | 40.0% |
| ! | GCCTAAAGGTTTTGCTTATG+TGG | - | chr4.4:10987809-10987828 | MS.gene28048:intron | 40.0% |
| ! | TAGGAATTTGAGGCCTTCAT+TGG | - | chr4.4:10985962-10985981 | MS.gene28048:intron | 40.0% |
| ! | TGTGTGAAATAAGGATTGGC+TGG | - | chr4.4:10985563-10985582 | MS.gene28048:intron | 40.0% |
| ! | TTTTAGGCTCATAGTAGAGG+GGG | - | chr4.4:10986260-10986279 | MS.gene28048:intron | 40.0% |
| !! | ATGCTCTAAGAGAGTTGGTT+TGG | - | chr4.4:10985619-10985638 | MS.gene28048:intron | 40.0% |
| !! | TCCTTTTGTTGACTGCAACT+AGG | - | chr4.4:10986683-10986702 | MS.gene28048:intron | 40.0% |
| !! | TGGAAATGCTCTAAGAGAGT+TGG | - | chr4.4:10985614-10985633 | MS.gene28048:intron | 40.0% |
| !!! | GAATTGGGTTTTAGCTCATC+TGG | - | chr4.4:10987630-10987649 | MS.gene28048:CDS | 40.0% |
| !!! | GATGCTAGGTCTGTTTTTGT+CGG | - | chr4.4:10983748-10983767 | MS.gene28048:intron | 40.0% |
| !!! | GTTTTATTGTTGGTGGCTTG+TGG | - | chr4.4:10987165-10987184 | MS.gene28048:intron | 40.0% |
| AAAATCAAAAGGGCGGCAGT+TGG | - | chr4.4:10983995-10984014 | MS.gene28048:intron | 45.0% | |
| AATGCATGCTAAGGTCGAGA+AGG | - | chr4.4:10983254-10983273 | MS.gene28048:intron | 45.0% | |
| ACGTGTCCTATAATTAGCGC+TGG | - | chr4.4:10986198-10986217 | MS.gene28048:intron | 45.0% | |
| AGCATGCATTTCACGAAGAG+CGG | + | chr4.4:10983244-10983263 | None:intergenic | 45.0% | |
| AGCTGCTTCTCAGGAAAACA+AGG | - | chr4.4:10983717-10983736 | MS.gene28048:intron | 45.0% | |
| AGTCATGTGGTACAGTGAAC+AGG | - | chr4.4:10987757-10987776 | MS.gene28048:intron | 45.0% | |
| AGTTTCTGCCATGCTCATGA+GGG | + | chr4.4:10986543-10986562 | None:intergenic | 45.0% | |
| ATTTGGTCTAACACGGTGAC+AGG | + | chr4.4:10984260-10984279 | None:intergenic | 45.0% | |
| CAGCAACACTTTCAGTCATG+TGG | - | chr4.4:10987744-10987763 | MS.gene28048:intron | 45.0% | |
| CCTTACATGTACTCCCCTTA+TGG | - | chr4.4:10988105-10988124 | MS.gene28048:CDS | 45.0% | |
| CTGAAGCCATATGCCATGTA+AGG | + | chr4.4:10988069-10988088 | None:intergenic | 45.0% | |
| CTTACATGGCATATGGCTTC+AGG | - | chr4.4:10988067-10988086 | MS.gene28048:intron | 45.0% | |
| GACAAGTTTGGTCAGCCTAA+AGG | - | chr4.4:10987795-10987814 | MS.gene28048:intron | 45.0% | |
| GACACTCGCTATAGCATAGA+CGG | + | chr4.4:10984568-10984587 | None:intergenic | 45.0% | |
| GATCTCAAAGCTGCTATTGC+AGG | - | chr4.4:10985146-10985165 | MS.gene28048:intron | 45.0% | |
| GCAGAAACTAGTACAGCTGA+AGG | - | chr4.4:10986554-10986573 | MS.gene28048:intron | 45.0% | |
| GCTAAGGTCGAGAAGGAAAT+TGG | - | chr4.4:10983261-10983280 | MS.gene28048:intron | 45.0% | |
| GGATGCAAACATGCACGTAA+AGG | + | chr4.4:10983835-10983854 | None:intergenic | 45.0% | |
| GTCATGTGGTACAGTGAACA+GGG | - | chr4.4:10987758-10987777 | MS.gene28048:intron | 45.0% | |
| GTTGCCTCTCTGAATTTGTG+AGG | - | chr4.4:10985500-10985519 | MS.gene28048:intron | 45.0% | |
| GTTGCGTACCCATATCCATA+AGG | + | chr4.4:10988123-10988142 | None:intergenic | 45.0% | |
| TAGTTTCTGCCATGCTCATG+AGG | + | chr4.4:10986544-10986563 | None:intergenic | 45.0% | |
| TGAAACTGAAGCTGTTCAGG+AGG | - | chr4.4:10987839-10987858 | MS.gene28048:intron | 45.0% | |
| TGATTATGCATGCACACCAG+AGG | - | chr4.4:10987716-10987735 | MS.gene28048:intron | 45.0% | |
| TGCAAACATGCACGTAAAGG+AGG | + | chr4.4:10983832-10983851 | None:intergenic | 45.0% | |
| TGCGTACCCATATCCATAAG+GGG | + | chr4.4:10988121-10988140 | None:intergenic | 45.0% | |
| TGCTTCTCAGGAAAACAAGG+AGG | - | chr4.4:10983720-10983739 | MS.gene28048:intron | 45.0% | |
| TGTTCTGTCTGTCAAACCAG+GGG | - | chr4.4:10984423-10984442 | MS.gene28048:intron | 45.0% | |
| TTCTCAGGAAAACAAGGAGG+AGG | - | chr4.4:10983723-10983742 | MS.gene28048:intron | 45.0% | |
| TTGGGCAAATGACACAGTAG+AGG | + | chr4.4:10986718-10986737 | None:intergenic | 45.0% | |
| TTTGGTCTAACACGGTGACA+GGG | + | chr4.4:10984259-10984278 | None:intergenic | 45.0% | |
| ! | AAGGAAATTGGCTCCGTTCA+AGG | - | chr4.4:10983273-10983292 | MS.gene28048:CDS | 45.0% |
| ! | AGGCTTTTCTCAAACTCCAC+AGG | + | chr4.4:10987075-10987094 | None:intergenic | 45.0% |
| ! | ATGCGGAGGTATAAATGCTC+AGG | - | chr4.4:10984767-10984786 | MS.gene28048:intron | 45.0% |
| ! | CCATAAGGGGAGTACATGTA+AGG | + | chr4.4:10988108-10988127 | None:intergenic | 45.0% |
| ! | GAGACAGCTTGTGGTTCTTT+TGG | - | chr4.4:10986615-10986634 | MS.gene28048:intron | 45.0% |
| ! | GATTTTAGGCTGAGCTGCAT+AGG | - | chr4.4:10986038-10986057 | MS.gene28048:intron | 45.0% |
| ! | GGTGACTTGTAGACCTGATA+AGG | - | chr4.4:10986988-10987007 | MS.gene28048:intron | 45.0% |
| ! | TAAGGGGAGTACATGTAAGG+GGG | + | chr4.4:10988105-10988124 | None:intergenic | 45.0% |
| ! | TACATGTAAGGGGGAGCATA+AGG | + | chr4.4:10988096-10988115 | None:intergenic | 45.0% |
| ! | TCAGCATGCTGTGAGTTTTC+TGG | - | chr4.4:10985594-10985613 | MS.gene28048:intron | 45.0% |
| ! | TTTAGTGAGGTATCACACGG+AGG | - | chr4.4:10986310-10986329 | MS.gene28048:intron | 45.0% |
| !! | CCATTTTTCCCTCTTAGACC+GGG | - | chr4.4:10984375-10984394 | MS.gene28048:intron | 45.0% |
| !!! | GCCATTTTTCCCTCTTAGAC+CGG | - | chr4.4:10984374-10984393 | MS.gene28048:intron | 45.0% |
| AAACCAGGGGTCGCAGAATT+TGG | - | chr4.4:10985075-10985094 | MS.gene28048:intron | 50.0% | |
| AAACTAAGGCCCGGTCTAAG+AGG | + | chr4.4:10984387-10984406 | None:intergenic | 50.0% | |
| AACCAGGGGTCGCAGAATTT+GGG | - | chr4.4:10985076-10985095 | MS.gene28048:intron | 50.0% | |
| AACTAAGGCCCGGTCTAAGA+GGG | + | chr4.4:10984386-10984405 | None:intergenic | 50.0% | |
| AATGGCATCCCTCATGAGCA+TGG | - | chr4.4:10986532-10986551 | MS.gene28048:intron | 50.0% | |
| ACATGGCATATGGCTTCAGG+AGG | - | chr4.4:10988070-10988089 | MS.gene28048:intron | 50.0% | |
| AGTATGTGTGAGAAGGCCTG+TGG | - | chr4.4:10987056-10987075 | MS.gene28048:intron | 50.0% | |
| ATCGAGCTCCTTCATACCAC+CGG | + | chr4.4:10983181-10983200 | None:intergenic | 50.0% | |
| ATGCATTTCACGAAGAGCGG+CGG | + | chr4.4:10983241-10983260 | None:intergenic | 50.0% | |
| ATTCCACAACGCTGTAGTGC+TGG | - | chr4.4:10984669-10984688 | MS.gene28048:intron | 50.0% | |
| CATTTGCCCAACGTGCCAAA+GGG | - | chr4.4:10986727-10986746 | MS.gene28048:intron | 50.0% | |
| CCAGGAACATTGGTCCTCTT+AGG | + | chr4.4:10988015-10988034 | None:intergenic | 50.0% | |
| CCCGGTCTAAGAGGGAAAAA+TGG | + | chr4.4:10984378-10984397 | None:intergenic | 50.0% | |
| CCTAAGAGGACCAATGTTCC+TGG | - | chr4.4:10988012-10988031 | MS.gene28048:intron | 50.0% | |
| CGCATTTACTGTCCTCTACG+TGG | - | chr4.4:10984166-10984185 | MS.gene28048:intron | 50.0% | |
| GCTGACCAAACTTGTCTGTC+AGG | + | chr4.4:10987791-10987810 | None:intergenic | 50.0% | |
| GTTGACTGCAACTAGGTCAG+TGG | - | chr4.4:10986690-10986709 | MS.gene28048:intron | 50.0% | |
| GTTTCCAGGTTCTGCCTAAG+AGG | - | chr4.4:10987998-10988017 | MS.gene28048:intron | 50.0% | |
| TCATTTGCCCAACGTGCCAA+AGG | - | chr4.4:10986726-10986745 | MS.gene28048:intron | 50.0% | |
| TCTCCGCTCACAACCAATGA+AGG | + | chr4.4:10985978-10985997 | None:intergenic | 50.0% | |
| TGAAGGAGCTCGATGAGATG+AGG | - | chr4.4:10983187-10983206 | MS.gene28048:intron | 50.0% | |
| TGAGAAGCAGCTACAGAAGC+AGG | + | chr4.4:10983709-10983728 | None:intergenic | 50.0% | |
| TGCACGTAAAGGAGGAACCA+TGG | + | chr4.4:10983824-10983843 | None:intergenic | 50.0% | |
| TGCTTCTGTAGCTGCTTCTC+AGG | - | chr4.4:10983708-10983727 | MS.gene28048:intron | 50.0% | |
| ! | AAGTGTTGCTGCACTTCCTC+TGG | + | chr4.4:10987735-10987754 | None:intergenic | 50.0% |
| ! | AGGCCTTCATTGGTTGTGAG+CGG | - | chr4.4:10985972-10985991 | MS.gene28048:intron | 50.0% |
| ! | CGATTTGGCCTTCTGTACCT+TGG | + | chr4.4:10988276-10988295 | None:intergenic | 50.0% |
| ! | GAAGAGCATGAGGTTTACGG+AGG | - | chr4.4:10983093-10983112 | MS.gene28048:CDS | 50.0% |
| !! | AATGGGCTGAAACTAAGGCC+CGG | + | chr4.4:10984396-10984415 | None:intergenic | 50.0% |
| !!! | TGGGGCCACTGGTGTTTTTT+AGG | - | chr4.4:10986244-10986263 | MS.gene28048:intron | 50.0% |
| AACAACAGCTGCGCACCCTT+TGG | + | chr4.4:10986745-10986764 | None:intergenic | 55.0% | |
| AATCCCAGACGTGGCTGAGA+TGG | - | chr4.4:10983119-10983138 | MS.gene28048:intron | 55.0% | |
| ACAAGGAGGAGGCAGATGCT+AGG | - | chr4.4:10983734-10983753 | MS.gene28048:intron | 55.0% | |
| ACCAGGGGTCGCAGAATTTG+GGG | - | chr4.4:10985077-10985096 | MS.gene28048:intron | 55.0% | |
| CAAACTGCAGGAAGGCTCCA+AGG | - | chr4.4:10988256-10988275 | MS.gene28048:CDS | 55.0% | |
| CAACTGGAGGAGACAGCTTG+TGG | - | chr4.4:10986606-10986625 | MS.gene28048:intron | 55.0% | |
| CGATGAAGCCGGTGGTATGA+AGG | - | chr4.4:10983170-10983189 | MS.gene28048:intron | 55.0% | |
| CTGTCTGTCAAACCAGGGGT+CGG | - | chr4.4:10984427-10984446 | MS.gene28048:intron | 55.0% | |
| CTTCCATCTCAGCCACGTCT+GGG | + | chr4.4:10983125-10983144 | None:intergenic | 55.0% | |
| GGAAGGCTCCAAGGTACAGA+AGG | - | chr4.4:10988265-10988284 | MS.gene28048:CDS | 55.0% | |
| TGGTCCTCTTAGGCAGAACC+TGG | + | chr4.4:10988005-10988024 | None:intergenic | 55.0% | |
| !! | CATACCACCGGCTTCATCGT+CGG | + | chr4.4:10983169-10983188 | None:intergenic | 55.0% |
| !! | GCGCAGCTGTTGTTTCCCTT+TGG | - | chr4.4:10986751-10986770 | MS.gene28048:intron | 55.0% |
| AAAGCAGTTTCGCCGACCCC+TGG | + | chr4.4:10984442-10984461 | None:intergenic | 60.0% | |
| ACCCCAAATTCTGCGACCCC+TGG | + | chr4.4:10985081-10985100 | None:intergenic | 60.0% | |
| CCACCAGCACTACAGCGTTG+TGG | + | chr4.4:10984675-10984694 | None:intergenic | 60.0% | |
| CCAGACGTGGCTGAGATGGA+AGG | - | chr4.4:10983123-10983142 | MS.gene28048:intron | 60.0% | |
| CCTTCCATCTCAGCCACGTC+TGG | + | chr4.4:10983126-10983145 | None:intergenic | 60.0% | |
| CGGAGGAGAAATCCCAGACG+TGG | - | chr4.4:10983110-10983129 | MS.gene28048:CDS | 60.0% | |
| TGCGCACCCTTTGGCACGTT+GGG | + | chr4.4:10986736-10986755 | None:intergenic | 60.0% | |
| ! | CCACAACGCTGTAGTGCTGG+TGG | - | chr4.4:10984672-10984691 | MS.gene28048:intron | 60.0% |
| ! | TATTTTGCGGGTGGGGCCAC+TGG | - | chr4.4:10986233-10986252 | MS.gene28048:intron | 60.0% |
| !! | GAGGCGCCGCTTGAAGGAAA+TGG | - | chr4.4:10983206-10983225 | MS.gene28048:intron | 60.0% |
| !! | TGAGATGAGGCGCCGCTTGA+AGG | - | chr4.4:10983200-10983219 | MS.gene28048:intron | 60.0% |
| CTGCGCACCCTTTGGCACGT+TGG | + | chr4.4:10986737-10986756 | None:intergenic | 65.0% | |
| !! | ACCACCGGCTTCATCGTCGG+CGG | + | chr4.4:10983166-10983185 | None:intergenic | 65.0% |
| GCAGCTGTGGCGAGCAGCTG+TGG | + | chr4.4:10984592-10984611 | None:intergenic | 70.0% | |
| TCCGCCGCCGACGATGAAGC+CGG | - | chr4.4:10983159-10983178 | MS.gene28048:intron | 70.0% | |
| ! | ACCGGCTTCATCGTCGGCGG+CGG | + | chr4.4:10983163-10983182 | None:intergenic | 70.0% |
| GCCGCCGACGATGAAGCCGG+TGG | - | chr4.4:10983162-10983181 | MS.gene28048:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10983084 | 10988314 | 10983084 | ID=MS.gene28048 |
| chr4.4 | mRNA | 10983084 | 10988314 | 10983084 | ID=MS.gene28048.t1;Parent=MS.gene28048 |
| chr4.4 | exon | 10988104 | 10988314 | 10988104 | ID=MS.gene28048.t1.exon1;Parent=MS.gene28048.t1 |
| chr4.4 | CDS | 10988104 | 10988314 | 10988104 | ID=cds.MS.gene28048.t1;Parent=MS.gene28048.t1 |
| chr4.4 | exon | 10987624 | 10987694 | 10987624 | ID=MS.gene28048.t1.exon2;Parent=MS.gene28048.t1 |
| chr4.4 | CDS | 10987624 | 10987694 | 10987624 | ID=cds.MS.gene28048.t1;Parent=MS.gene28048.t1 |
| chr4.4 | exon | 10983493 | 10983684 | 10983493 | ID=MS.gene28048.t1.exon3;Parent=MS.gene28048.t1 |
| chr4.4 | CDS | 10983493 | 10983684 | 10983493 | ID=cds.MS.gene28048.t1;Parent=MS.gene28048.t1 |
| chr4.4 | exon | 10983265 | 10983392 | 10983265 | ID=MS.gene28048.t1.exon4;Parent=MS.gene28048.t1 |
| chr4.4 | CDS | 10983265 | 10983392 | 10983265 | ID=cds.MS.gene28048.t1;Parent=MS.gene28048.t1 |
| chr4.4 | exon | 10983084 | 10983132 | 10983084 | ID=MS.gene28048.t1.exon5;Parent=MS.gene28048.t1 |
| chr4.4 | CDS | 10983084 | 10983132 | 10983084 | ID=cds.MS.gene28048.t1;Parent=MS.gene28048.t1 |
| Gene Sequence |
| Protein sequence |
