Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030883.t1 | XP_013446709.1 | 100 | 402 | 0 | 0 | 1 | 402 | 1 | 402 | 5.10E-228 | 800 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030883.t1 | Q9SAF1 | 87.0 | 401 | 51 | 1 | 1 | 401 | 1 | 400 | 2.2e-203 | 709.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030883.t1 | A0A072TU70 | 100.0 | 402 | 0 | 0 | 1 | 402 | 1 | 402 | 3.6e-228 | 800.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030883 | MS.gene05947 | PPI |
| MS.gene030883 | MS.gene015837 | PPI |
| MS.gene030883 | MS.gene20134 | PPI |
| MS.gene030883 | MS.gene049055 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030883.t1 | MTR_8g089630 | 100.000 | 402 | 0 | 0 | 1 | 402 | 1 | 402 | 0.0 | 839 |
| MS.gene030883.t1 | MTR_2g008050 | 34.483 | 406 | 215 | 9 | 10 | 413 | 10 | 366 | 3.82e-71 | 228 |
| MS.gene030883.t1 | MTR_7g026230 | 34.097 | 393 | 209 | 8 | 10 | 400 | 10 | 354 | 2.90e-68 | 221 |
| MS.gene030883.t1 | MTR_3g095530 | 34.271 | 391 | 211 | 8 | 10 | 400 | 10 | 354 | 3.75e-68 | 221 |
| MS.gene030883.t1 | MTR_2g096840 | 34.097 | 393 | 209 | 8 | 10 | 400 | 10 | 354 | 8.18e-68 | 220 |
| MS.gene030883.t1 | MTR_6g004000 | 33.588 | 393 | 211 | 8 | 10 | 400 | 10 | 354 | 9.91e-68 | 219 |
| MS.gene030883.t1 | MTR_7g093260 | 34.414 | 401 | 197 | 10 | 10 | 400 | 10 | 354 | 1.28e-67 | 219 |
| MS.gene030883.t1 | MTR_0015s0130 | 34.097 | 393 | 209 | 8 | 10 | 400 | 10 | 354 | 1.84e-67 | 219 |
| MS.gene030883.t1 | MTR_7g027185 | 32.500 | 400 | 233 | 10 | 6 | 401 | 3 | 369 | 1.01e-59 | 199 |
| MS.gene030883.t1 | MTR_7g027185 | 32.481 | 391 | 231 | 9 | 6 | 396 | 3 | 360 | 1.49e-59 | 198 |
| MS.gene030883.t1 | MTR_7g027185 | 33.923 | 339 | 196 | 7 | 6 | 344 | 3 | 313 | 8.07e-56 | 187 |
| MS.gene030883.t1 | MTR_8g464900 | 28.345 | 441 | 239 | 13 | 9 | 400 | 9 | 421 | 1.21e-42 | 155 |
| MS.gene030883.t1 | MTR_5g066400 | 28.281 | 442 | 239 | 14 | 9 | 400 | 9 | 422 | 1.63e-40 | 149 |
| MS.gene030883.t1 | MTR_5g066400 | 28.351 | 388 | 219 | 12 | 9 | 349 | 9 | 384 | 2.01e-36 | 138 |
| MS.gene030883.t1 | MTR_5g066400 | 26.757 | 441 | 219 | 15 | 9 | 400 | 9 | 394 | 4.09e-32 | 126 |
| MS.gene030883.t1 | MTR_2g445210 | 25.111 | 450 | 247 | 13 | 4 | 400 | 2 | 414 | 2.38e-28 | 116 |
| MS.gene030883.t1 | MTR_8g007440 | 26.937 | 271 | 163 | 6 | 98 | 349 | 12 | 266 | 6.90e-24 | 100 |
| MS.gene030883.t1 | MTR_2g445210 | 24.682 | 393 | 226 | 10 | 4 | 345 | 2 | 375 | 8.04e-23 | 99.4 |
| MS.gene030883.t1 | MTR_3g030550 | 25.128 | 390 | 232 | 13 | 9 | 395 | 3 | 335 | 3.29e-22 | 97.4 |
| MS.gene030883.t1 | MTR_3g067945 | 25.926 | 270 | 173 | 6 | 5 | 267 | 17 | 266 | 6.90e-15 | 77.0 |
| MS.gene030883.t1 | MTR_3g010170 | 24.335 | 263 | 167 | 9 | 104 | 353 | 174 | 417 | 4.69e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030883.t1 | AT1G13180 | 87.781 | 401 | 48 | 1 | 1 | 401 | 1 | 400 | 0.0 | 755 |
| MS.gene030883.t1 | AT2G42100 | 34.184 | 392 | 212 | 9 | 9 | 400 | 10 | 355 | 5.02e-69 | 223 |
| MS.gene030883.t1 | AT3G53750 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 2.88e-68 | 221 |
| MS.gene030883.t1 | AT3G53750 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 2.88e-68 | 221 |
| MS.gene030883.t1 | AT2G37620 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 2.88e-68 | 221 |
| MS.gene030883.t1 | AT2G37620 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 2.88e-68 | 221 |
| MS.gene030883.t1 | AT2G37620 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 2.88e-68 | 221 |
| MS.gene030883.t1 | AT2G37620 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 2.88e-68 | 221 |
| MS.gene030883.t1 | AT3G12110 | 33.842 | 393 | 210 | 8 | 10 | 400 | 10 | 354 | 3.34e-68 | 221 |
| MS.gene030883.t1 | AT5G09810 | 34.351 | 393 | 208 | 8 | 10 | 400 | 10 | 354 | 5.59e-68 | 220 |
| MS.gene030883.t1 | AT5G59370 | 34.165 | 401 | 198 | 10 | 10 | 400 | 10 | 354 | 4.12e-67 | 218 |
| MS.gene030883.t1 | AT5G59370 | 34.165 | 401 | 198 | 10 | 10 | 400 | 10 | 354 | 4.12e-67 | 218 |
| MS.gene030883.t1 | AT3G46520 | 34.165 | 401 | 198 | 10 | 10 | 400 | 10 | 354 | 5.38e-67 | 218 |
| MS.gene030883.t1 | AT3G46520 | 34.165 | 401 | 198 | 10 | 10 | 400 | 10 | 354 | 5.38e-67 | 218 |
| MS.gene030883.t1 | AT3G18780 | 33.504 | 391 | 214 | 8 | 10 | 400 | 10 | 354 | 2.10e-66 | 216 |
| MS.gene030883.t1 | AT3G18780 | 33.504 | 391 | 214 | 8 | 10 | 400 | 10 | 354 | 3.03e-66 | 216 |
| MS.gene030883.t1 | AT3G18780 | 33.504 | 391 | 214 | 8 | 10 | 400 | 10 | 354 | 3.03e-66 | 216 |
| MS.gene030883.t1 | AT1G49240 | 33.504 | 391 | 214 | 8 | 10 | 400 | 10 | 354 | 3.10e-66 | 216 |
| MS.gene030883.t1 | AT2G42090 | 30.808 | 396 | 219 | 8 | 10 | 403 | 4 | 346 | 9.93e-61 | 201 |
| MS.gene030883.t1 | AT3G27000 | 32.346 | 405 | 227 | 10 | 6 | 401 | 3 | 369 | 3.22e-60 | 201 |
| MS.gene030883.t1 | AT2G42170 | 34.421 | 337 | 187 | 7 | 64 | 400 | 4 | 306 | 7.66e-58 | 192 |
| MS.gene030883.t1 | AT2G42170 | 34.421 | 337 | 187 | 7 | 64 | 400 | 4 | 306 | 7.66e-58 | 192 |
| MS.gene030883.t1 | AT2G42170 | 34.421 | 337 | 187 | 7 | 64 | 400 | 4 | 306 | 1.15e-57 | 192 |
| MS.gene030883.t1 | AT2G42170 | 34.421 | 337 | 187 | 7 | 64 | 400 | 4 | 306 | 1.15e-57 | 192 |
| MS.gene030883.t1 | AT1G18450 | 28.702 | 439 | 237 | 12 | 9 | 400 | 9 | 418 | 4.90e-44 | 159 |
| MS.gene030883.t1 | AT3G33520 | 25.740 | 439 | 232 | 13 | 10 | 400 | 5 | 397 | 2.14e-27 | 113 |
| MS.gene030883.t1 | AT2G42170 | 30.088 | 226 | 132 | 5 | 175 | 400 | 9 | 208 | 2.20e-25 | 103 |
| MS.gene030883.t1 | AT3G60830 | 25.635 | 394 | 225 | 13 | 9 | 395 | 3 | 335 | 8.76e-23 | 99.4 |
| MS.gene030883.t1 | AT3G12380 | 25.979 | 281 | 173 | 9 | 10 | 278 | 22 | 279 | 2.44e-15 | 78.6 |
| MS.gene030883.t1 | AT3G12380 | 25.704 | 284 | 176 | 9 | 10 | 278 | 22 | 285 | 2.07e-14 | 75.9 |
| MS.gene030883.t1 | AT1G73910 | 30.216 | 139 | 92 | 2 | 9 | 147 | 9 | 142 | 2.31e-12 | 64.7 |
| MS.gene030883.t1 | AT1G73910 | 30.216 | 139 | 92 | 2 | 9 | 147 | 9 | 142 | 2.31e-12 | 64.7 |
Find 101 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGATCTTGATTTCTTTAT+TGG | 0.095428 | 4.3:+10896930 | MS.gene030883:CDS |
| GAAGTTCTTCTAAAGGAAAT+TGG | 0.220793 | 4.3:+10896880 | MS.gene030883:CDS |
| GGGATGCCATGGAGCGATTT+TGG | 0.248634 | 4.3:+10897033 | MS.gene030883:CDS |
| TTGTTGCAGGTATACGAAAA+TGG | 0.249521 | 4.3:+10896779 | MS.gene030883:intron |
| GTTGCGGATGGTTATGTTAT+TGG | 0.252532 | 4.3:+10897747 | MS.gene030883:CDS |
| GCAGCTGAAGCGCGCCTTAA+TGG | 0.265252 | 4.3:+10899764 | MS.gene030883:CDS |
| GAATATGGAGCCCCAGTCTT+TGG | 0.285326 | 4.3:-10898624 | None:intergenic |
| GCTCCATATTCTTGTGATAT+TGG | 0.295202 | 4.3:+10898636 | MS.gene030883:CDS |
| TCAACCTGACCATGCTTAAT+CGG | 0.327099 | 4.3:-10897005 | None:intergenic |
| ATTGGCTATGAACGCTTTCT+TGG | 0.327285 | 4.3:+10898654 | MS.gene030883:CDS |
| CAAACCAAACTGCAAATCTT+TGG | 0.333787 | 4.3:-10900382 | None:intergenic |
| TATACGAAAATGGGCTTTGC+TGG | 0.344789 | 4.3:+10896789 | MS.gene030883:CDS |
| TAGCCAATATCACAAGAATA+TGG | 0.346527 | 4.3:-10898639 | None:intergenic |
| CCTGAGAGTCGTGAGTATAC+TGG | 0.349298 | 4.3:+10897134 | MS.gene030883:CDS |
| CTATCCAAAGATTTGCAGTT+TGG | 0.357424 | 4.3:+10900378 | MS.gene030883:CDS |
| TCCATTCACCGGTGCTTCCT+CGG | 0.366832 | 4.3:-10900629 | None:intergenic |
| CACAAGGAGATCATTATATA+AGG | 0.369729 | 4.3:+10899315 | MS.gene030883:CDS |
| AGCATGGTCAGGTTGAGAAT+TGG | 0.376747 | 4.3:+10897012 | MS.gene030883:CDS |
| GCCACTTCGAACGAGTCTTC+TGG | 0.379121 | 4.3:-10898254 | None:intergenic |
| TCAGCATAATGCTGGGGTTA+TGG | 0.382607 | 4.3:+10896908 | MS.gene030883:CDS |
| ATCAAATCAGTTCCTATTGC+GGG | 0.386908 | 4.3:+10897777 | MS.gene030883:CDS |
| GCATGGTCAGGTTGAGAATT+GGG | 0.389411 | 4.3:+10897013 | MS.gene030883:CDS |
| CAAAGATTTGCAGTTTGGTT+TGG | 0.389429 | 4.3:+10900383 | MS.gene030883:CDS |
| TCTCCATTGCTTGATATACT+TGG | 0.404016 | 4.3:-10898592 | None:intergenic |
| TCTGTGCTTGCTCTCGCTGC+TGG | 0.404421 | 4.3:+10897209 | MS.gene030883:CDS |
| TGTTGCAGGTATACGAAAAT+GGG | 0.405987 | 4.3:+10896780 | MS.gene030883:intron |
| TTTCAGAATATAGTGTTGTC+AGG | 0.422885 | 4.3:+10899665 | MS.gene030883:intron |
| CATTGCTTGATATACTTGGC+TGG | 0.423106 | 4.3:-10898588 | None:intergenic |
| AATGATCTCCTTGTGTCAAT+TGG | 0.425483 | 4.3:-10899307 | None:intergenic |
| TGCTGGCTACACTACGTCTA+AGG | 0.427772 | 4.3:+10897226 | MS.gene030883:CDS |
| AGATTTGCAGTTTGGTTTGG+TGG | 0.432383 | 4.3:+10900386 | MS.gene030883:CDS |
| CTGAGAGTCGTGAGTATACT+GGG | 0.432628 | 4.3:+10897135 | MS.gene030883:CDS |
| ACAGGAGTCGTAGTTGATAT+CGG | 0.443109 | 4.3:+10897699 | MS.gene030883:CDS |
| CCATTCACCGGTGCTTCCTC+GGG | 0.448480 | 4.3:-10900628 | None:intergenic |
| CCCGAGGAAGCACCGGTGAA+TGG | 0.456812 | 4.3:+10900628 | MS.gene030883:CDS |
| TCGTTAATCGCAACCACACT+AGG | 0.456949 | 4.3:-10896837 | None:intergenic |
| CATTGATTTGTGCAGGAAAG+AGG | 0.458746 | 4.3:+10898218 | MS.gene030883:intron |
| TGGATTGCTCAGCATAATGC+TGG | 0.465247 | 4.3:+10896900 | MS.gene030883:CDS |
| GTAACATCCTTTCCCGCAAT+AGG | 0.466496 | 4.3:-10897789 | None:intergenic |
| GTTGTCATCGACAATGGCTC+CGG | 0.466593 | 4.3:+10896560 | MS.gene030883:CDS |
| CACCTGCTCTGACATAGTTA+AGG | 0.470644 | 4.3:+10898304 | MS.gene030883:CDS |
| ATCAGTTCCTATTGCGGGAA+AGG | 0.476954 | 4.3:+10897782 | MS.gene030883:CDS |
| CCAGTATACTCACGACTCTC+AGG | 0.480188 | 4.3:-10897134 | None:intergenic |
| CAACCTGACCATGCTTAATC+GGG | 0.487813 | 4.3:-10897004 | None:intergenic |
| GAGAGCAAGCACAGAATTCA+CGG | 0.488016 | 4.3:-10897201 | None:intergenic |
| CTGCAAATCTTTGGATAGGA+TGG | 0.489552 | 4.3:-10900373 | None:intergenic |
| AAAAGAAAATAATGATCCTC+AGG | 0.490852 | 4.3:-10897089 | None:intergenic |
| ATGCACTTGTCTATTACAAC+AGG | 0.494188 | 4.3:-10899274 | None:intergenic |
| AGGCGCTGTCAACGGACTCT+CGG | 0.495487 | 4.3:-10897114 | None:intergenic |
| ATAACATAACCATCCGCAAC+TGG | 0.499019 | 4.3:-10897744 | None:intergenic |
| TACCTACCCGCATTAGCTGC+TGG | 0.504471 | 4.3:-10897821 | None:intergenic |
| ACAGCAGGACGAGAAGCAGC+TGG | 0.509967 | 4.3:-10896539 | None:intergenic |
| GAAGTCGCTGCTATATATCT+CGG | 0.516026 | 4.3:-10899239 | None:intergenic |
| TTTCGTCCAGCAGCTAATGC+GGG | 0.520923 | 4.3:+10897815 | MS.gene030883:CDS |
| CTGAGTACATTGACCTCGAC+TGG | 0.521211 | 4.3:-10900350 | None:intergenic |
| GTCGTAGTTGATATCGGAGA+TGG | 0.522188 | 4.3:+10897705 | MS.gene030883:CDS |
| AGGAGGATCAACAATGTTCA+AGG | 0.526518 | 4.3:+10899685 | MS.gene030883:CDS |
| AGAGGCGTTAAACCAAAGAC+TGG | 0.527817 | 4.3:+10898612 | MS.gene030883:CDS |
| CAATCGAGAAGTTCTTCTAA+AGG | 0.532385 | 4.3:+10896873 | MS.gene030883:CDS |
| AAGTCGCTGCTATATATCTC+GGG | 0.535811 | 4.3:-10899238 | None:intergenic |
| TTACCCGATTAAGCATGGTC+AGG | 0.538788 | 4.3:+10897001 | MS.gene030883:CDS |
| TAGATTATGTCTTGCTCCCG+AGG | 0.542041 | 4.3:+10900612 | MS.gene030883:intron |
| AGTGTATATTCAATTATTTG+CGG | 0.546766 | 4.3:+10897060 | MS.gene030883:CDS |
| GGATTGCTCAGCATAATGCT+GGG | 0.548668 | 4.3:+10896901 | MS.gene030883:CDS |
| CCTGCTGTTGTCATCGACAA+TGG | 0.550059 | 4.3:+10896554 | MS.gene030883:CDS |
| CAAACTGCAAATCTTTGGAT+AGG | 0.553466 | 4.3:-10900377 | None:intergenic |
| TTCACGGCAATGTAAAGTCC+AGG | 0.555616 | 4.3:-10897185 | None:intergenic |
| TCGTAGTTGATATCGGAGAT+GGG | 0.559617 | 4.3:+10897706 | MS.gene030883:CDS |
| GGTTGAGAATTGGGATGCCA+TGG | 0.561166 | 4.3:+10897022 | MS.gene030883:CDS |
| TCTTGCTCCCGAGGAAGCAC+CGG | 0.567093 | 4.3:+10900621 | MS.gene030883:CDS |
| CGACTCTCAGGCGCTGTCAA+CGG | 0.571890 | 4.3:-10897122 | None:intergenic |
| TTGTCATGCAATCCATTCAC+CGG | 0.573619 | 4.3:-10900640 | None:intergenic |
| AACCTTAACTATGTCAGAGC+AGG | 0.574256 | 4.3:-10898306 | None:intergenic |
| TTGTCATCGACAATGGCTCC+GGG | 0.583211 | 4.3:+10896561 | MS.gene030883:CDS |
| CTGCTGCCAAAATCGCTCCA+TGG | 0.585282 | 4.3:-10897039 | None:intergenic |
| TTATTTGCGGTGTGATCCTG+AGG | 0.590272 | 4.3:+10897073 | MS.gene030883:CDS |
| CCATTGTCGATGACAACAGC+AGG | 0.592798 | 4.3:-10896554 | None:intergenic |
| CATCAAATCAGTTCCTATTG+CGG | 0.593258 | 4.3:+10897776 | MS.gene030883:CDS |
| GAGGCGTTAAACCAAAGACT+GGG | 0.595159 | 4.3:+10898613 | MS.gene030883:CDS |
| TACACATGTTGTACCAGTTG+CGG | 0.599702 | 4.3:+10897731 | MS.gene030883:CDS |
| TAAGGCGCGCTTCAGCTGCA+AGG | 0.600648 | 4.3:-10899760 | None:intergenic |
| CTCACTTACCCGATTAAGCA+TGG | 0.602719 | 4.3:+10896996 | MS.gene030883:CDS |
| AAGACTCGTTCGAAGTGGCT+CGG | 0.603015 | 4.3:+10898258 | MS.gene030883:CDS |
| TTGTCTATTACAACAGGCAA+AGG | 0.608553 | 4.3:-10899268 | None:intergenic |
| CAGCAGGACGAGAAGCAGCT+GGG | 0.616158 | 4.3:-10896538 | None:intergenic |
| CAGCCAAGTATATCAAGCAA+TGG | 0.617742 | 4.3:+10898589 | MS.gene030883:CDS |
| TGAACGCTTTCTTGGCCCTG+AGG | 0.617976 | 4.3:+10898662 | MS.gene030883:CDS |
| ACCAGAAGACTCGTTCGAAG+TGG | 0.622925 | 4.3:+10898253 | MS.gene030883:CDS |
| CGAAGTGGCTCGGAAAGTGA+AGG | 0.622978 | 4.3:+10898268 | MS.gene030883:CDS |
| CATGTTGTACCAGTTGCGGA+TGG | 0.639900 | 4.3:+10897735 | MS.gene030883:CDS |
| TCCACAGTCACATCCAGTCG+AGG | 0.643643 | 4.3:+10900337 | MS.gene030883:intron |
| CGTAGTTGATATCGGAGATG+GGG | 0.648015 | 4.3:+10897707 | MS.gene030883:CDS |
| CAGAATATAGTGTTGTCAGG+AGG | 0.650438 | 4.3:+10899668 | MS.gene030883:intron |
| AAGTATATCAAGCAATGGAG+AGG | 0.653283 | 4.3:+10898594 | MS.gene030883:CDS |
| GATTGCTCAGCATAATGCTG+GGG | 0.663436 | 4.3:+10896902 | MS.gene030883:CDS |
| TATTACAACAGGCAAAGGAG+TGG | 0.671222 | 4.3:-10899263 | None:intergenic |
| ACTTCGAACGAGTCTTCTGG+TGG | 0.687169 | 4.3:-10898251 | None:intergenic |
| AGTCTGCGCCAATTGACACA+AGG | 0.690930 | 4.3:+10899299 | MS.gene030883:CDS |
| ACACTAGGAACAATAAAACA+AGG | 0.696455 | 4.3:-10896822 | None:intergenic |
| AGGCGTTAAACCAAAGACTG+GGG | 0.735801 | 4.3:+10898614 | MS.gene030883:CDS |
| TGAGAGTCGTGAGTATACTG+GGG | 0.741187 | 4.3:+10897136 | MS.gene030883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATATTGAAATAAAGT+TGG | - | chr4.3:10899400-10899419 | None:intergenic | 15.0% |
| !!! | AGATTTTGTATTATTATGAT+AGG | + | chr4.3:10897272-10897291 | MS.gene030883:intron | 15.0% |
| !!! | ATTATTTTGATTTTTAGACA+TGG | - | chr4.3:10900492-10900511 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTTAGTGAATTA+AGG | + | chr4.3:10898474-10898493 | MS.gene030883:intron | 15.0% |
| !!! | TAACATTCTAATTTTATACA+AGG | - | chr4.3:10897849-10897868 | None:intergenic | 15.0% |
| !!! | TATTGTTTTTTGAAGTTTTT+AGG | + | chr4.3:10897646-10897665 | MS.gene030883:intron | 15.0% |
| !!! | TTTCTTTTTTAGTGAATTAA+GGG | + | chr4.3:10898475-10898494 | MS.gene030883:intron | 15.0% |
| !! | AAAACCAGAAGATATAATAA+GGG | - | chr4.3:10898889-10898908 | None:intergenic | 20.0% |
| !! | AGTGTATATTCAATTATTTG+CGG | + | chr4.3:10897060-10897079 | MS.gene030883:CDS | 20.0% |
| !! | ATAAAATAACAATGTGTCAA+TGG | - | chr4.3:10899903-10899922 | None:intergenic | 20.0% |
| !! | TAAAACCAGAAGATATAATA+AGG | - | chr4.3:10898890-10898909 | None:intergenic | 20.0% |
| !! | TTGAATATAGAATGTTATGT+TGG | + | chr4.3:10897592-10897611 | MS.gene030883:intron | 20.0% |
| !!! | AGATTTTAAAATTAAGGAAC+AGG | - | chr4.3:10897886-10897905 | None:intergenic | 20.0% |
| !!! | AGTCACAGATTTTAAAATTA+AGG | - | chr4.3:10897892-10897911 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTATTGGAATTG+TGG | + | chr4.3:10896695-10896714 | MS.gene030883:intron | 20.0% |
| !!! | ATGAATAAGATCTAAAATCA+TGG | - | chr4.3:10898099-10898118 | None:intergenic | 20.0% |
| !!! | TATTATATCTTCTGGTTTTA+AGG | + | chr4.3:10898890-10898909 | MS.gene030883:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr4.3:10900136-10900155 | None:intergenic | 20.0% |
| !!! | TTGTATTATGTTGATAGAAT+TGG | + | chr4.3:10897352-10897371 | MS.gene030883:intron | 20.0% |
| !!! | TTTTTCTTTTACCTTTTTCT+GGG | + | chr4.3:10900450-10900469 | MS.gene030883:intron | 20.0% |
| !!! | TTTTTTCTTTTACCTTTTTC+TGG | + | chr4.3:10900449-10900468 | MS.gene030883:intron | 20.0% |
| ! | AAAAAGAAAGTAAACCCAAT+TGG | - | chr4.3:10896615-10896634 | None:intergenic | 25.0% |
| ! | AAAAGAAAATAATGATCCTC+AGG | - | chr4.3:10897092-10897111 | None:intergenic | 25.0% |
| ! | AAAAGAAAGTAAACCCAATT+GGG | - | chr4.3:10896614-10896633 | None:intergenic | 25.0% |
| ! | AACTAAAAAATATCCCATTC+AGG | - | chr4.3:10896679-10896698 | None:intergenic | 25.0% |
| ! | AACTTGTAAATCTCAATCTT+TGG | + | chr4.3:10899492-10899511 | MS.gene030883:intron | 25.0% |
| ! | AAGATCATAAATCAAAGATC+TGG | - | chr4.3:10899570-10899589 | None:intergenic | 25.0% |
| ! | ACTTATGATGTTGGATAAAA+CGG | + | chr4.3:10900545-10900564 | MS.gene030883:intron | 25.0% |
| ! | AGAATTGAATATTACAACCT+TGG | - | chr4.3:10898152-10898171 | None:intergenic | 25.0% |
| ! | AGATCATAAATCAAAGATCT+GGG | - | chr4.3:10899569-10899588 | None:intergenic | 25.0% |
| ! | ATAATCATTTAAGGAGTTTG+TGG | + | chr4.3:10898360-10898379 | MS.gene030883:intron | 25.0% |
| ! | ATCATTAAGAACATGTAAAG+TGG | - | chr4.3:10899609-10899628 | None:intergenic | 25.0% |
| ! | ATGATTTCTTTAGTAGATGA+AGG | - | chr4.3:10899110-10899129 | None:intergenic | 25.0% |
| ! | ATTCTAAACACAAAATGCTT+TGG | + | chr4.3:10897471-10897490 | MS.gene030883:intron | 25.0% |
| ! | GACATTGAACAAAAAATGTT+CGG | - | chr4.3:10898429-10898448 | None:intergenic | 25.0% |
| ! | GATGATAGAGAAATTATAAC+GGG | - | chr4.3:10898700-10898719 | None:intergenic | 25.0% |
| ! | GGATGATAGAGAAATTATAA+CGG | - | chr4.3:10898701-10898720 | None:intergenic | 25.0% |
| ! | GTTTATTCATGACAGAAAAT+GGG | - | chr4.3:10898812-10898831 | None:intergenic | 25.0% |
| ! | TGAAATGAAAAGGACAAAAT+GGG | - | chr4.3:10899650-10899669 | None:intergenic | 25.0% |
| ! | TGTTTATTCATGACAGAAAA+TGG | - | chr4.3:10898813-10898832 | None:intergenic | 25.0% |
| ! | TTCAGTATAATTGTATGTGT+CGG | + | chr4.3:10900161-10900180 | MS.gene030883:intron | 25.0% |
| ! | TTCTTTGGCATAATCATTTA+AGG | + | chr4.3:10898351-10898370 | MS.gene030883:intron | 25.0% |
| !! | AATAATAATCTCTTTTGACC+TGG | + | chr4.3:10900506-10900525 | MS.gene030883:intron | 25.0% |
| !! | ATAGAATTGGAATAATGGAA+TGG | + | chr4.3:10897365-10897384 | MS.gene030883:intron | 25.0% |
| !! | CCACATGATTTAAAATAATG+AGG | + | chr4.3:10899949-10899968 | MS.gene030883:intron | 25.0% |
| !! | TGTATGCTTGTTAACATTAA+AGG | + | chr4.3:10897911-10897930 | MS.gene030883:intron | 25.0% |
| !! | TGTTGATAGAATTGGAATAA+TGG | + | chr4.3:10897360-10897379 | MS.gene030883:intron | 25.0% |
| !!! | AATAATGAGGTGTTAGTTTT+TGG | + | chr4.3:10899962-10899981 | MS.gene030883:intron | 25.0% |
| !!! | ATATGTTTATTGGTTTGATC+TGG | + | chr4.3:10900281-10900300 | MS.gene030883:intron | 25.0% |
| !!! | ATCAACACCTGAATTTTTTA+CGG | + | chr4.3:10900421-10900440 | MS.gene030883:CDS | 25.0% |
| !!! | ATTTTGGTCATTGAATCAAT+AGG | + | chr4.3:10899156-10899175 | MS.gene030883:intron | 25.0% |
| !!! | ATTTTGTTGCTTTTCCTTTT+TGG | + | chr4.3:10898918-10898937 | MS.gene030883:intron | 25.0% |
| !!! | CACTATATTCTGAAATGAAA+AGG | - | chr4.3:10899660-10899679 | None:intergenic | 25.0% |
| !!! | CCTCATTATTTTAAATCATG+TGG | - | chr4.3:10899952-10899971 | None:intergenic | 25.0% |
| !!! | GTTTTATTTATTCAAACCTG+TGG | + | chr4.3:10897412-10897431 | MS.gene030883:intron | 25.0% |
| !!! | TAAAAATGTGTTTTTGTTGC+AGG | + | chr4.3:10896766-10896785 | MS.gene030883:intron | 25.0% |
| !!! | TTTTGTTGCTTTTCCTTTTT+GGG | + | chr4.3:10898919-10898938 | MS.gene030883:intron | 25.0% |
| AACGATTTCTAAATCCTGAT+AGG | + | chr4.3:10898947-10898966 | MS.gene030883:intron | 30.0% | |
| AAGCAAAGAAACAAAGCTAT+TGG | - | chr4.3:10898396-10898415 | None:intergenic | 30.0% | |
| AAGCATACCGTAAAAAATTC+AGG | - | chr4.3:10900431-10900450 | None:intergenic | 30.0% | |
| AATAAACACCTTTCTTAGTG+GGG | + | chr4.3:10898825-10898844 | MS.gene030883:intron | 30.0% | |
| AATAGAAATGGAGTGAGAAA+AGG | - | chr4.3:10896589-10896608 | None:intergenic | 30.0% | |
| AATTCAACACAAACCCAATT+CGG | - | chr4.3:10896744-10896763 | None:intergenic | 30.0% | |
| ACACTAGGAACAATAAAACA+AGG | - | chr4.3:10896825-10896844 | None:intergenic | 30.0% | |
| ACAGAGATCAATAGCTAATT+GGG | - | chr4.3:10899071-10899090 | None:intergenic | 30.0% | |
| ACGATTTCTAAATCCTGATA+GGG | + | chr4.3:10898948-10898967 | MS.gene030883:intron | 30.0% | |
| AGAAAACCTGCAAAAGTAAT+AGG | - | chr4.3:10899213-10899232 | None:intergenic | 30.0% | |
| AGGGACATAAAGTTATCTAT+TGG | + | chr4.3:10898494-10898513 | MS.gene030883:intron | 30.0% | |
| ATAATTGCTCAATTTCTCTC+AGG | + | chr4.3:10898542-10898561 | MS.gene030883:intron | 30.0% | |
| ATGACCAAAATATTACACCA+AGG | - | chr4.3:10899147-10899166 | None:intergenic | 30.0% | |
| ATTAAGAACATGTAAAGTGG+AGG | - | chr4.3:10899606-10899625 | None:intergenic | 30.0% | |
| CACAAGGAGATCATTATATA+AGG | + | chr4.3:10899315-10899334 | MS.gene030883:CDS | 30.0% | |
| CCATTTCTATTTACCCAATT+GGG | + | chr4.3:10896598-10896617 | MS.gene030883:intron | 30.0% | |
| CTGAAATGAAAAGGACAAAA+TGG | - | chr4.3:10899651-10899670 | None:intergenic | 30.0% | |
| GAAAACCTGCAAAAGTAATA+GGG | - | chr4.3:10899212-10899231 | None:intergenic | 30.0% | |
| GAATAAACACCTTTCTTAGT+GGG | + | chr4.3:10898824-10898843 | MS.gene030883:intron | 30.0% | |
| GATATTGAGATATCCGAATT+GGG | + | chr4.3:10896728-10896747 | MS.gene030883:intron | 30.0% | |
| GATCATAAATCAAAGATCTG+GGG | - | chr4.3:10899568-10899587 | None:intergenic | 30.0% | |
| GCTGATCTTGATTTCTTTAT+TGG | + | chr4.3:10896930-10896949 | MS.gene030883:CDS | 30.0% | |
| GTCAGTACCAAAACTTAATA+TGG | - | chr4.3:10898130-10898149 | None:intergenic | 30.0% | |
| GTGATCATCAGTTTAAGTAA+AGG | - | chr4.3:10899817-10899836 | None:intergenic | 30.0% | |
| GTTCACTGCTTATATTTCTT+TGG | + | chr4.3:10898336-10898355 | MS.gene030883:intron | 30.0% | |
| TACAGAGATCAATAGCTAAT+TGG | - | chr4.3:10899072-10899091 | None:intergenic | 30.0% | |
| TAGCCAATATCACAAGAATA+TGG | - | chr4.3:10898642-10898661 | None:intergenic | 30.0% | |
| TATCAACATAATACAACAGC+CGG | - | chr4.3:10897348-10897367 | None:intergenic | 30.0% | |
| TCACCAATTAAATTGAGATG+AGG | - | chr4.3:10899348-10899367 | None:intergenic | 30.0% | |
| TCATAGTTTATGAAAAGCCT+CGG | + | chr4.3:10900254-10900273 | MS.gene030883:intron | 30.0% | |
| TCCATTTCTATTTACCCAAT+TGG | + | chr4.3:10896597-10896616 | MS.gene030883:intron | 30.0% | |
| TGAATAAACACCTTTCTTAG+TGG | + | chr4.3:10898823-10898842 | MS.gene030883:intron | 30.0% | |
| TGATATTGAGATATCCGAAT+TGG | + | chr4.3:10896727-10896746 | MS.gene030883:intron | 30.0% | |
| TTAAGAACATGTAAAGTGGA+GGG | - | chr4.3:10899605-10899624 | None:intergenic | 30.0% | |
| TTACAAGTTCTCGAACATTA+AGG | - | chr4.3:10899481-10899500 | None:intergenic | 30.0% | |
| TTGTAATATTACAAGCGCAT+GGG | + | chr4.3:10897554-10897573 | MS.gene030883:intron | 30.0% | |
| TTGTACAAAAGATTTACCAC+AGG | - | chr4.3:10897431-10897450 | None:intergenic | 30.0% | |
| TTTCAGAATATAGTGTTGTC+AGG | + | chr4.3:10899665-10899684 | MS.gene030883:intron | 30.0% | |
| TTTCATAAACTATGAAGCAC+TGG | - | chr4.3:10900249-10900268 | None:intergenic | 30.0% | |
| TTTGCAATAGCTAAGCTATA+TGG | + | chr4.3:10899862-10899881 | MS.gene030883:intron | 30.0% | |
| TTTGTAATATTACAAGCGCA+TGG | + | chr4.3:10897553-10897572 | MS.gene030883:intron | 30.0% | |
| ! | AATAATGGAATGGAATTGGA+TGG | + | chr4.3:10897375-10897394 | MS.gene030883:intron | 30.0% |
| ! | CGTTTTGCCATATTAAGTTT+TGG | + | chr4.3:10898120-10898139 | MS.gene030883:intron | 30.0% |
| ! | GAAGTTCTTCTAAAGGAAAT+TGG | + | chr4.3:10896880-10896899 | MS.gene030883:CDS | 30.0% |
| ! | TAAAACGGTTCTTTAGGTTT+AGG | + | chr4.3:10900560-10900579 | MS.gene030883:intron | 30.0% |
| ! | TTGGAATAATGGAATGGAAT+TGG | + | chr4.3:10897371-10897390 | MS.gene030883:intron | 30.0% |
| !! | AAATCGTTGATAACCCAAAA+AGG | - | chr4.3:10898935-10898954 | None:intergenic | 30.0% |
| !! | ATGTTTACATTGATTTGTGC+AGG | + | chr4.3:10898211-10898230 | MS.gene030883:intron | 30.0% |
| !! | CATTCCTTGGTGTAATATTT+TGG | + | chr4.3:10899140-10899159 | MS.gene030883:intron | 30.0% |
| !! | TATTCTGAGACTTATGATGT+TGG | + | chr4.3:10900536-10900555 | MS.gene030883:intron | 30.0% |
| !! | TCACTTTTATCTCTCCATTA+AGG | - | chr4.3:10899781-10899800 | None:intergenic | 30.0% |
| !! | TTGTTTTATTGTTCCTAGTG+TGG | + | chr4.3:10896824-10896843 | MS.gene030883:CDS | 30.0% |
| !!! | AATTGGATGGTTAGTTTTGA+AGG | + | chr4.3:10897388-10897407 | MS.gene030883:intron | 30.0% |
| !!! | ATTGGATGGTTAGTTTTGAA+GGG | + | chr4.3:10897389-10897408 | MS.gene030883:intron | 30.0% |
| !!! | GTGTTAGTTTTTGGTTGATT+CGG | + | chr4.3:10899971-10899990 | MS.gene030883:intron | 30.0% |
| AAAGTAATAGGGTAAACCCA+CGG | - | chr4.3:10899201-10899220 | None:intergenic | 35.0% | |
| AAGTATATCAAGCAATGGAG+AGG | + | chr4.3:10898594-10898613 | MS.gene030883:CDS | 35.0% | |
| AATGATCTCCTTGTGTCAAT+TGG | - | chr4.3:10899310-10899329 | None:intergenic | 35.0% | |
| AATGCTAATCATGGATGAGT+GGG | + | chr4.3:10897996-10898015 | MS.gene030883:intron | 35.0% | |
| AATTAAGGAACAGGTAGTAG+TGG | - | chr4.3:10897877-10897896 | None:intergenic | 35.0% | |
| ACAAGTCATAACCCAGAAAA+AGG | - | chr4.3:10900464-10900483 | None:intergenic | 35.0% | |
| ATCAAATCAGTTCCTATTGC+GGG | + | chr4.3:10897777-10897796 | MS.gene030883:CDS | 35.0% | |
| ATGCACTTGTCTATTACAAC+AGG | - | chr4.3:10899277-10899296 | None:intergenic | 35.0% | |
| CAAACCAAACTGCAAATCTT+TGG | - | chr4.3:10900385-10900404 | None:intergenic | 35.0% | |
| CAAACTGCAAATCTTTGGAT+AGG | - | chr4.3:10900380-10900399 | None:intergenic | 35.0% | |
| CAAAGATTTGCAGTTTGGTT+TGG | + | chr4.3:10900383-10900402 | MS.gene030883:CDS | 35.0% | |
| CAATCGAGAAGTTCTTCTAA+AGG | + | chr4.3:10896873-10896892 | MS.gene030883:CDS | 35.0% | |
| CAGAAGATATAATAAGGGCA+AGG | - | chr4.3:10898884-10898903 | None:intergenic | 35.0% | |
| CATCAAATCAGTTCCTATTG+CGG | + | chr4.3:10897776-10897795 | MS.gene030883:CDS | 35.0% | |
| CCCAATTGGGTAAATAGAAA+TGG | - | chr4.3:10896601-10896620 | None:intergenic | 35.0% | |
| CGATTTCTAAATCCTGATAG+GGG | + | chr4.3:10898949-10898968 | MS.gene030883:intron | 35.0% | |
| CTATCCAAAGATTTGCAGTT+TGG | + | chr4.3:10900378-10900397 | MS.gene030883:CDS | 35.0% | |
| CTTGCCCTTATTATATCTTC+TGG | + | chr4.3:10898882-10898901 | MS.gene030883:intron | 35.0% | |
| GATTAGCATTAACCAATGCA+TGG | - | chr4.3:10897986-10898005 | None:intergenic | 35.0% | |
| GATTTATGAAACTTGCCTAG+CGG | + | chr4.3:10897312-10897331 | MS.gene030883:intron | 35.0% | |
| GCACCTCATCTCAATTTAAT+TGG | + | chr4.3:10899342-10899361 | MS.gene030883:intron | 35.0% | |
| GCTCCATATTCTTGTGATAT+TGG | + | chr4.3:10898636-10898655 | MS.gene030883:CDS | 35.0% | |
| GGGGATTATCTGTGAAAAAA+TGG | + | chr4.3:10898844-10898863 | MS.gene030883:intron | 35.0% | |
| GGTCATTGAATCAATAGGAT+TGG | + | chr4.3:10899161-10899180 | MS.gene030883:intron | 35.0% | |
| GTTGGATAAAACGGTTCTTT+AGG | + | chr4.3:10900554-10900573 | MS.gene030883:intron | 35.0% | |
| TAATGCTAATCATGGATGAG+TGG | + | chr4.3:10897995-10898014 | MS.gene030883:intron | 35.0% | |
| TAGATGAAGGAACAAACCTA+AGG | - | chr4.3:10899097-10899116 | None:intergenic | 35.0% | |
| TAGCTTAGCTATTGCAAACA+AGG | - | chr4.3:10899860-10899879 | None:intergenic | 35.0% | |
| TATTCATGACAGAAAATGGG+AGG | - | chr4.3:10898809-10898828 | None:intergenic | 35.0% | |
| TATTGATCTCTGTACTCCTT+AGG | + | chr4.3:10899078-10899097 | MS.gene030883:intron | 35.0% | |
| TCAACAGAGTGATTCACTTT+CGG | - | chr4.3:10897512-10897531 | None:intergenic | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | - | chr4.3:10900130-10900149 | None:intergenic | 35.0% | |
| TCTCCATTGCTTGATATACT+TGG | - | chr4.3:10898595-10898614 | None:intergenic | 35.0% | |
| TGTTGCAGGTATACGAAAAT+GGG | + | chr4.3:10896780-10896799 | MS.gene030883:intron | 35.0% | |
| TGTTTGTGAACTATGAAGCA+CGG | + | chr4.3:10900081-10900100 | MS.gene030883:intron | 35.0% | |
| TTGTCTATTACAACAGGCAA+AGG | - | chr4.3:10899271-10899290 | None:intergenic | 35.0% | |
| TTGTTGCAGGTATACGAAAA+TGG | + | chr4.3:10896779-10896798 | MS.gene030883:intron | 35.0% | |
| TTTGGAAGAAGTTCTCACAT+TGG | + | chr4.3:10900055-10900074 | MS.gene030883:intron | 35.0% | |
| ! | CAATGTTCAAGGATTTTCAC+AGG | + | chr4.3:10899696-10899715 | MS.gene030883:CDS | 35.0% |
| ! | GTTTGTTGAAATGCCTGAAT+GGG | + | chr4.3:10896663-10896682 | MS.gene030883:intron | 35.0% |
| ! | TGTTTGTTGAAATGCCTGAA+TGG | + | chr4.3:10896662-10896681 | MS.gene030883:intron | 35.0% |
| !! | GCATTGGTTAATGCTAATCA+TGG | + | chr4.3:10897987-10898006 | MS.gene030883:intron | 35.0% |
| !! | GTTATGTTGGCTTAGCATAT+TGG | + | chr4.3:10897605-10897624 | MS.gene030883:intron | 35.0% |
| !! | GTTTACCCTATTACTTTTGC+AGG | + | chr4.3:10899204-10899223 | MS.gene030883:intron | 35.0% |
| !! | TCTTTTTAGTGTGAGATGAC+AGG | + | chr4.3:10897681-10897700 | MS.gene030883:intron | 35.0% |
| !! | TTTGAGACTTTTAATGTGCC+TGG | + | chr4.3:10897167-10897186 | MS.gene030883:CDS | 35.0% |
| !!! | TTAAGTTTTGGTACTGACCA+AGG | + | chr4.3:10898132-10898151 | MS.gene030883:intron | 35.0% |
| !!! | TTGGATGGTTAGTTTTGAAG+GGG | + | chr4.3:10897390-10897409 | MS.gene030883:intron | 35.0% |
| AAAATGGGCAAGTCGTAAAG+AGG | - | chr4.3:10899635-10899654 | None:intergenic | 40.0% | |
| AACCTTAACTATGTCAGAGC+AGG | - | chr4.3:10898309-10898328 | None:intergenic | 40.0% | |
| AAGTAATAGGGTAAACCCAC+GGG | - | chr4.3:10899200-10899219 | None:intergenic | 40.0% | |
| AAGTCGCTGCTATATATCTC+GGG | - | chr4.3:10899241-10899260 | None:intergenic | 40.0% | |
| ACAATGTGTCAATGGTTGAC+TGG | - | chr4.3:10899895-10899914 | None:intergenic | 40.0% | |
| ACAGAAAATGGGAGGTAATC+AGG | - | chr4.3:10898801-10898820 | None:intergenic | 40.0% | |
| ACTACTTGATCAATGATCCC+AGG | - | chr4.3:10899028-10899047 | None:intergenic | 40.0% | |
| AGGAGGATCAACAATGTTCA+AGG | + | chr4.3:10899685-10899704 | MS.gene030883:CDS | 40.0% | |
| ATAACATAACCATCCGCAAC+TGG | - | chr4.3:10897747-10897766 | None:intergenic | 40.0% | |
| ATGAAGCACGGATACATACA+TGG | + | chr4.3:10900093-10900112 | MS.gene030883:intron | 40.0% | |
| ATGCTAATCATGGATGAGTG+GGG | + | chr4.3:10897997-10898016 | MS.gene030883:intron | 40.0% | |
| ATTGGCTATGAACGCTTTCT+TGG | + | chr4.3:10898654-10898673 | MS.gene030883:CDS | 40.0% | |
| CACATCTCTCAGAAAGTTCT+GGG | + | chr4.3:10898725-10898744 | MS.gene030883:intron | 40.0% | |
| CAGAATATAGTGTTGTCAGG+AGG | + | chr4.3:10899668-10899687 | MS.gene030883:intron | 40.0% | |
| CAGATAATCCCCACTAAGAA+AGG | - | chr4.3:10898836-10898855 | None:intergenic | 40.0% | |
| CAGCCAAGTATATCAAGCAA+TGG | + | chr4.3:10898589-10898608 | MS.gene030883:CDS | 40.0% | |
| CAGGCATTTCAACAAACACA+TGG | - | chr4.3:10896660-10896679 | None:intergenic | 40.0% | |
| CATAAATCAAAGATCTGGGG+TGG | - | chr4.3:10899565-10899584 | None:intergenic | 40.0% | |
| CATGAGACAGTTCATGAATC+TGG | - | chr4.3:10898194-10898213 | None:intergenic | 40.0% | |
| CATTGCTTGATATACTTGGC+TGG | - | chr4.3:10898591-10898610 | None:intergenic | 40.0% | |
| CCAATAAACATATAGCTCCG+AGG | - | chr4.3:10900274-10900293 | None:intergenic | 40.0% | |
| CCTCGGAGCTATATGTTTAT+TGG | + | chr4.3:10900271-10900290 | MS.gene030883:intron | 40.0% | |
| CTGCAAATCTTTGGATAGGA+TGG | - | chr4.3:10900376-10900395 | None:intergenic | 40.0% | |
| CTTCCAAACATGTGTACATG+TGG | - | chr4.3:10900043-10900062 | None:intergenic | 40.0% | |
| GAAGTCGCTGCTATATATCT+CGG | - | chr4.3:10899242-10899261 | None:intergenic | 40.0% | |
| GGTGATTTAAAGATTCCCGT+GGG | + | chr4.3:10899182-10899201 | MS.gene030883:intron | 40.0% | |
| GTTGCGGATGGTTATGTTAT+TGG | + | chr4.3:10897747-10897766 | MS.gene030883:CDS | 40.0% | |
| TACACATGTTGTACCAGTTG+CGG | + | chr4.3:10897731-10897750 | MS.gene030883:CDS | 40.0% | |
| TATTACAACAGGCAAAGGAG+TGG | - | chr4.3:10899266-10899285 | None:intergenic | 40.0% | |
| TCAACCTGACCATGCTTAAT+CGG | - | chr4.3:10897008-10897027 | None:intergenic | 40.0% | |
| TCACTCTGTTGAGTAAGAAC+TGG | + | chr4.3:10897520-10897539 | MS.gene030883:intron | 40.0% | |
| TCTAAATCCTGATAGGGGAT+GGG | + | chr4.3:10898954-10898973 | MS.gene030883:intron | 40.0% | |
| TGGTGATTTAAAGATTCCCG+TGG | + | chr4.3:10899181-10899200 | MS.gene030883:intron | 40.0% | |
| TGTTGAGTAAGAACTGGTTG+CGG | + | chr4.3:10897526-10897545 | MS.gene030883:intron | 40.0% | |
| TTCTAAATCCTGATAGGGGA+TGG | + | chr4.3:10898953-10898972 | MS.gene030883:intron | 40.0% | |
| TTGGGATCATCAAGTCTCTT+AGG | - | chr4.3:10899053-10899072 | None:intergenic | 40.0% | |
| ! | ACAGGAGTCGTAGTTGATAT+CGG | + | chr4.3:10897699-10897718 | MS.gene030883:CDS | 40.0% |
| ! | ACTTTCTGAGAGATGTGCTA+TGG | - | chr4.3:10898722-10898741 | None:intergenic | 40.0% |
| ! | CATGAAAGTGTAGCATTCCT+TGG | + | chr4.3:10899127-10899146 | MS.gene030883:intron | 40.0% |
| ! | GAAAGTGTGAAACCATGCAT+TGG | + | chr4.3:10897971-10897990 | MS.gene030883:intron | 40.0% |
| ! | TATACGAAAATGGGCTTTGC+TGG | + | chr4.3:10896789-10896808 | MS.gene030883:CDS | 40.0% |
| ! | TCGTAGTTGATATCGGAGAT+GGG | + | chr4.3:10897706-10897725 | MS.gene030883:CDS | 40.0% |
| !! | AGATTTGCAGTTTGGTTTGG+TGG | + | chr4.3:10900386-10900405 | MS.gene030883:CDS | 40.0% |
| !! | CATTGATTTGTGCAGGAAAG+AGG | + | chr4.3:10898218-10898237 | MS.gene030883:intron | 40.0% |
| AGGCGTTAAACCAAAGACTG+GGG | + | chr4.3:10898614-10898633 | MS.gene030883:CDS | 45.0% | |
| ATCAGTTCCTATTGCGGGAA+AGG | + | chr4.3:10897782-10897801 | MS.gene030883:CDS | 45.0% | |
| CAACCTGACCATGCTTAATC+GGG | - | chr4.3:10897007-10897026 | None:intergenic | 45.0% | |
| CACCTGCTCTGACATAGTTA+AGG | + | chr4.3:10898304-10898323 | MS.gene030883:CDS | 45.0% | |
| CCAAACATGTGTACATGTGG+AGG | - | chr4.3:10900040-10900059 | None:intergenic | 45.0% | |
| CCTCCACATGTACACATGTT+TGG | + | chr4.3:10900037-10900056 | MS.gene030883:intron | 45.0% | |
| CTCACTTACCCGATTAAGCA+TGG | + | chr4.3:10896996-10897015 | MS.gene030883:CDS | 45.0% | |
| CTGAGAGTCGTGAGTATACT+GGG | + | chr4.3:10897135-10897154 | MS.gene030883:CDS | 45.0% | |
| GAGAGCAAGCACAGAATTCA+CGG | - | chr4.3:10897204-10897223 | None:intergenic | 45.0% | |
| GATTGCTCAGCATAATGCTG+GGG | + | chr4.3:10896902-10896921 | MS.gene030883:CDS | 45.0% | |
| GCACATCTCTCAGAAAGTTC+TGG | + | chr4.3:10898724-10898743 | MS.gene030883:intron | 45.0% | |
| GGATTGCTCAGCATAATGCT+GGG | + | chr4.3:10896901-10896920 | MS.gene030883:CDS | 45.0% | |
| GTAACATCCTTTCCCGCAAT+AGG | - | chr4.3:10897792-10897811 | None:intergenic | 45.0% | |
| TAGATTATGTCTTGCTCCCG+AGG | + | chr4.3:10900612-10900631 | MS.gene030883:intron | 45.0% | |
| TCAGCATAATGCTGGGGTTA+TGG | + | chr4.3:10896908-10896927 | MS.gene030883:CDS | 45.0% | |
| TCGTTAATCGCAACCACACT+AGG | - | chr4.3:10896840-10896859 | None:intergenic | 45.0% | |
| TGAGAGTCGTGAGTATACTG+GGG | + | chr4.3:10897136-10897155 | MS.gene030883:CDS | 45.0% | |
| TGGATTGCTCAGCATAATGC+TGG | + | chr4.3:10896900-10896919 | MS.gene030883:CDS | 45.0% | |
| TTACCCGATTAAGCATGGTC+AGG | + | chr4.3:10897001-10897020 | MS.gene030883:CDS | 45.0% | |
| TTATTTGCGGTGTGATCCTG+AGG | + | chr4.3:10897073-10897092 | MS.gene030883:CDS | 45.0% | |
| TTCACGGCAATGTAAAGTCC+AGG | - | chr4.3:10897188-10897207 | None:intergenic | 45.0% | |
| TTTCCGACTGATAAGCCTCT+GGG | - | chr4.3:10899541-10899560 | None:intergenic | 45.0% | |
| ! | CGAAGTGCGTTTTCTGTTGT+TGG | + | chr4.3:10899515-10899534 | MS.gene030883:intron | 45.0% |
| ! | CGTAGTTGATATCGGAGATG+GGG | + | chr4.3:10897707-10897726 | MS.gene030883:CDS | 45.0% |
| ! | GAGGCGTTAAACCAAAGACT+GGG | + | chr4.3:10898613-10898632 | MS.gene030883:CDS | 45.0% |
| ! | GTCGTAGTTGATATCGGAGA+TGG | + | chr4.3:10897705-10897724 | MS.gene030883:CDS | 45.0% |
| ! | TTTTCCGACTGATAAGCCTC+TGG | - | chr4.3:10899542-10899561 | None:intergenic | 45.0% |
| ! | TTTTCGTCCAGCAGCTAATG+CGG | + | chr4.3:10897814-10897833 | MS.gene030883:CDS | 45.0% |
| !! | AGAGGCGTTAAACCAAAGAC+TGG | + | chr4.3:10898612-10898631 | MS.gene030883:CDS | 45.0% |
| !! | AGCATGGTCAGGTTGAGAAT+TGG | + | chr4.3:10897012-10897031 | MS.gene030883:CDS | 45.0% |
| !! | ATGGAGTGAGAAAAGGTACC+CGG | - | chr4.3:10896582-10896601 | None:intergenic | 45.0% |
| !! | GCATGGTCAGGTTGAGAATT+GGG | + | chr4.3:10897013-10897032 | MS.gene030883:CDS | 45.0% |
| !!! | TATTTTTTAGTTTTTTTTAT+TGG | + | chr4.3:10896687-10896706 | MS.gene030883:intron | 5.0% |
| AAGACTCGTTCGAAGTGGCT+CGG | + | chr4.3:10898258-10898277 | MS.gene030883:CDS | 50.0% | |
| AAGTGCAGGCAATGCACATC+CGG | + | chr4.3:10898989-10899008 | MS.gene030883:intron | 50.0% | |
| ACCAGAAGACTCGTTCGAAG+TGG | + | chr4.3:10898253-10898272 | MS.gene030883:CDS | 50.0% | |
| ACTTCGAACGAGTCTTCTGG+TGG | - | chr4.3:10898254-10898273 | None:intergenic | 50.0% | |
| AGTCTGCGCCAATTGACACA+AGG | + | chr4.3:10899299-10899318 | MS.gene030883:CDS | 50.0% | |
| ATCCTGATAGGGGATGGGAA+AGG | + | chr4.3:10898959-10898978 | MS.gene030883:intron | 50.0% | |
| CATGTTGTACCAGTTGCGGA+TGG | + | chr4.3:10897735-10897754 | MS.gene030883:CDS | 50.0% | |
| CCAGTATACTCACGACTCTC+AGG | - | chr4.3:10897137-10897156 | None:intergenic | 50.0% | |
| CCATTGTCGATGACAACAGC+AGG | - | chr4.3:10896557-10896576 | None:intergenic | 50.0% | |
| CCTGAGAGTCGTGAGTATAC+TGG | + | chr4.3:10897134-10897153 | MS.gene030883:CDS | 50.0% | |
| CCTGCTGTTGTCATCGACAA+TGG | + | chr4.3:10896554-10896573 | MS.gene030883:CDS | 50.0% | |
| CTGAGTACATTGACCTCGAC+TGG | - | chr4.3:10900353-10900372 | None:intergenic | 50.0% | |
| GAATATGGAGCCCCAGTCTT+TGG | - | chr4.3:10898627-10898646 | None:intergenic | 50.0% | |
| GGAAAGGGATGCTTAAGTGC+AGG | + | chr4.3:10898975-10898994 | MS.gene030883:intron | 50.0% | |
| GGGCCAAAGAACAAACCTCA+GGG | - | chr4.3:10898680-10898699 | None:intergenic | 50.0% | |
| GGTTGAGAATTGGGATGCCA+TGG | + | chr4.3:10897022-10897041 | MS.gene030883:CDS | 50.0% | |
| GTTGTCATCGACAATGGCTC+CGG | + | chr4.3:10896560-10896579 | MS.gene030883:CDS | 50.0% | |
| TCCTGATAGGGGATGGGAAA+GGG | + | chr4.3:10898960-10898979 | MS.gene030883:intron | 50.0% | |
| TGAGTAAGAACTGGTTGCGG+TGG | + | chr4.3:10897529-10897548 | MS.gene030883:intron | 50.0% | |
| TTGTCATCGACAATGGCTCC+GGG | + | chr4.3:10896561-10896580 | MS.gene030883:CDS | 50.0% | |
| TTTCGTCCAGCAGCTAATGC+GGG | + | chr4.3:10897815-10897834 | MS.gene030883:CDS | 50.0% | |
| ! | GTTTTCTGTTGTTGGCCCAG+AGG | + | chr4.3:10899523-10899542 | MS.gene030883:intron | 50.0% |
| ! | TGCTGGCTACACTACGTCTA+AGG | + | chr4.3:10897226-10897245 | MS.gene030883:CDS | 50.0% |
| ! | TGGCCCTGAGGTTTGTTCTT+TGG | + | chr4.3:10898674-10898693 | MS.gene030883:intron | 50.0% |
| !! | TATGAAGCACTGGCACTCCT+CGG | - | chr4.3:10900239-10900258 | None:intergenic | 50.0% |
| !! | TGTATGTGTCGGTGTCGTGT+CGG | + | chr4.3:10900172-10900191 | MS.gene030883:intron | 50.0% |
| ACCAGGACACGTCTAATCCG+AGG | + | chr4.3:10900219-10900238 | MS.gene030883:intron | 55.0% | |
| ACCTCGACTGGATGTGACTG+TGG | - | chr4.3:10900341-10900360 | None:intergenic | 55.0% | |
| AGGCAATGCACATCCGGGTT+GGG | + | chr4.3:10898995-10899014 | MS.gene030883:intron | 55.0% | |
| AGTGCAGGCAATGCACATCC+GGG | + | chr4.3:10898990-10899009 | MS.gene030883:intron | 55.0% | |
| CGGGCCAAAGAACAAACCTC+AGG | - | chr4.3:10898681-10898700 | None:intergenic | 55.0% | |
| CTGCTGCCAAAATCGCTCCA+TGG | - | chr4.3:10897042-10897061 | None:intergenic | 55.0% | |
| GCCACTTCGAACGAGTCTTC+TGG | - | chr4.3:10898257-10898276 | None:intergenic | 55.0% | |
| GCCTAGCGGAAAGATGCTTC+CGG | + | chr4.3:10897326-10897345 | MS.gene030883:intron | 55.0% | |
| TACCTACCCGCATTAGCTGC+TGG | - | chr4.3:10897824-10897843 | None:intergenic | 55.0% | |
| TCCACAGTCACATCCAGTCG+AGG | + | chr4.3:10900337-10900356 | MS.gene030883:intron | 55.0% | |
| TCCATTCACCGGTGCTTCCT+CGG | - | chr4.3:10900632-10900651 | None:intergenic | 55.0% | |
| TCCCTTTCCCATCCCCTATC+AGG | - | chr4.3:10898964-10898983 | None:intergenic | 55.0% | |
| TGAACGCTTTCTTGGCCCTG+AGG | + | chr4.3:10898662-10898681 | MS.gene030883:CDS | 55.0% | |
| TGGCCCAGAGGCTTATCAGT+CGG | + | chr4.3:10899535-10899554 | MS.gene030883:intron | 55.0% | |
| ! | ATGCACATCCGGGTTGGGAT+TGG | + | chr4.3:10899000-10899019 | MS.gene030883:intron | 55.0% |
| ! | CGAAGTGGCTCGGAAAGTGA+AGG | + | chr4.3:10898268-10898287 | MS.gene030883:CDS | 55.0% |
| ! | GGGATGCCATGGAGCGATTT+TGG | + | chr4.3:10897033-10897052 | MS.gene030883:CDS | 55.0% |
| ! | TCCTCGGATTAGACGTGTCC+TGG | - | chr4.3:10900223-10900242 | None:intergenic | 55.0% |
| ACAGCAGGACGAGAAGCAGC+TGG | - | chr4.3:10896542-10896561 | None:intergenic | 60.0% | |
| CACGACACGTGTCTGACACC+AGG | + | chr4.3:10900202-10900221 | MS.gene030883:intron | 60.0% | |
| CAGCAGGACGAGAAGCAGCT+GGG | - | chr4.3:10896541-10896560 | None:intergenic | 60.0% | |
| CAGGCAATGCACATCCGGGT+TGG | + | chr4.3:10898994-10899013 | MS.gene030883:intron | 60.0% | |
| CCATTCACCGGTGCTTCCTC+GGG | - | chr4.3:10900631-10900650 | None:intergenic | 60.0% | |
| CCCAGGTTCCAATCCCAACC+CGG | - | chr4.3:10899011-10899030 | None:intergenic | 60.0% | |
| GCAGCTGAAGCGCGCCTTAA+TGG | + | chr4.3:10899764-10899783 | MS.gene030883:CDS | 60.0% | |
| GTCCAGCAGCTAATGCGGGT+AGG | + | chr4.3:10897819-10897838 | MS.gene030883:intron | 60.0% | |
| TAAGGCGCGCTTCAGCTGCA+AGG | - | chr4.3:10899763-10899782 | None:intergenic | 60.0% | |
| TCTGTGCTTGCTCTCGCTGC+TGG | + | chr4.3:10897209-10897228 | MS.gene030883:CDS | 60.0% | |
| ! | AGGCGCTGTCAACGGACTCT+CGG | - | chr4.3:10897117-10897136 | None:intergenic | 60.0% |
| ! | CCGGGTTGGGATTGGAACCT+GGG | + | chr4.3:10899008-10899027 | MS.gene030883:intron | 60.0% |
| ! | CGACTCTCAGGCGCTGTCAA+CGG | - | chr4.3:10897125-10897144 | None:intergenic | 60.0% |
| ! | TCCGGGTTGGGATTGGAACC+TGG | + | chr4.3:10899007-10899026 | MS.gene030883:intron | 60.0% |
| ! | TCTTGCTCCCGAGGAAGCAC+CGG | + | chr4.3:10900621-10900640 | MS.gene030883:CDS | 60.0% |
| !! | GCCGGAAGCATCTTTCCGCT+AGG | - | chr4.3:10897330-10897349 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGTGTCGGAGT+GGG | + | chr4.3:10900178-10900197 | MS.gene030883:intron | 60.0% |
| !! | CCCGAGGAAGCACCGGTGAA+TGG | + | chr4.3:10900628-10900647 | MS.gene030883:CDS | 65.0% |
| !! | GTGTCGGTGTCGTGTCGGAG+TGG | + | chr4.3:10900177-10900196 | MS.gene030883:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10896533 | 10900659 | 10896533 | ID=MS.gene030883 |
| chr4.3 | mRNA | 10896533 | 10900659 | 10896533 | ID=MS.gene030883.t1;Parent=MS.gene030883 |
| chr4.3 | exon | 10896533 | 10896582 | 10896533 | ID=MS.gene030883.t1.exon1;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10896533 | 10896582 | 10896533 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10896788 | 10897247 | 10896788 | ID=MS.gene030883.t1.exon2;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10896788 | 10897247 | 10896788 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10897690 | 10897836 | 10897690 | ID=MS.gene030883.t1.exon3;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10897690 | 10897836 | 10897690 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10898233 | 10898325 | 10898233 | ID=MS.gene030883.t1.exon4;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10898233 | 10898325 | 10898233 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10898564 | 10898683 | 10898564 | ID=MS.gene030883.t1.exon5;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10898564 | 10898683 | 10898564 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10899226 | 10899336 | 10899226 | ID=MS.gene030883.t1.exon6;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10899226 | 10899336 | 10899226 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10899671 | 10899796 | 10899671 | ID=MS.gene030883.t1.exon7;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10899671 | 10899796 | 10899671 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10900344 | 10900442 | 10900344 | ID=MS.gene030883.t1.exon8;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10900344 | 10900442 | 10900344 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| chr4.3 | exon | 10900615 | 10900659 | 10900615 | ID=MS.gene030883.t1.exon9;Parent=MS.gene030883.t1 |
| chr4.3 | CDS | 10900615 | 10900659 | 10900615 | ID=cds.MS.gene030883.t1;Parent=MS.gene030883.t1 |
| Gene Sequence |
| Protein sequence |
