Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031718.t1 | XP_003607459.2 | 98.1 | 428 | 8 | 0 | 1 | 428 | 1 | 428 | 2.70E-253 | 884 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031718.t1 | Q7Y223 | 67.1 | 423 | 137 | 2 | 4 | 425 | 6 | 427 | 2.7e-172 | 606.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031718.t1 | G7JSU9 | 98.1 | 428 | 8 | 0 | 1 | 428 | 1 | 428 | 2.0e-253 | 884.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010551 | MS.gene031718 | PPI |
| MS.gene031718 | MS.gene59404 | PPI |
| MS.gene031718 | MS.gene64694 | PPI |
| MS.gene031718 | MS.gene02423 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031718.t1 | MTR_4g078230 | 98.131 | 428 | 8 | 0 | 1 | 428 | 1 | 428 | 0.0 | 880 |
| MS.gene031718.t1 | MTR_2g090390 | 70.998 | 431 | 121 | 3 | 1 | 428 | 1 | 430 | 0.0 | 634 |
| MS.gene031718.t1 | MTR_8g005670 | 48.214 | 392 | 198 | 3 | 23 | 414 | 50 | 436 | 2.79e-136 | 399 |
| MS.gene031718.t1 | MTR_7g073550 | 49.215 | 382 | 192 | 2 | 33 | 414 | 53 | 432 | 4.23e-135 | 395 |
| MS.gene031718.t1 | MTR_7g073550 | 49.215 | 382 | 192 | 2 | 33 | 414 | 52 | 431 | 4.62e-135 | 395 |
| MS.gene031718.t1 | MTR_7g073620 | 48.691 | 382 | 194 | 2 | 33 | 414 | 5 | 384 | 2.45e-134 | 392 |
| MS.gene031718.t1 | MTR_8g006550 | 47.704 | 392 | 200 | 3 | 23 | 414 | 53 | 439 | 1.16e-133 | 392 |
| MS.gene031718.t1 | MTR_8g005270 | 47.704 | 392 | 200 | 3 | 23 | 414 | 33 | 419 | 1.45e-133 | 391 |
| MS.gene031718.t1 | MTR_4g043760 | 43.700 | 373 | 205 | 2 | 38 | 410 | 33 | 400 | 2.68e-119 | 353 |
| MS.gene031718.t1 | MTR_7g111740 | 43.122 | 378 | 207 | 3 | 36 | 413 | 59 | 428 | 9.38e-119 | 353 |
| MS.gene031718.t1 | MTR_5g020890 | 43.501 | 377 | 210 | 1 | 39 | 415 | 31 | 404 | 1.33e-118 | 353 |
| MS.gene031718.t1 | MTR_1g085420 | 43.200 | 375 | 209 | 2 | 39 | 413 | 32 | 402 | 4.61e-117 | 348 |
| MS.gene031718.t1 | MTR_1g085430 | 42.216 | 379 | 215 | 2 | 35 | 413 | 28 | 402 | 5.49e-117 | 347 |
| MS.gene031718.t1 | MTR_1g085310 | 40.852 | 399 | 231 | 3 | 17 | 415 | 7 | 400 | 1.10e-116 | 347 |
| MS.gene031718.t1 | MTR_3g112060 | 40.342 | 409 | 224 | 7 | 11 | 415 | 4 | 396 | 1.33e-114 | 342 |
| MS.gene031718.t1 | MTR_1g085350 | 42.819 | 376 | 207 | 4 | 39 | 413 | 89 | 457 | 4.66e-114 | 342 |
| MS.gene031718.t1 | MTR_1g085320 | 39.895 | 381 | 206 | 4 | 35 | 413 | 27 | 386 | 7.56e-104 | 313 |
| MS.gene031718.t1 | MTR_0005s0150 | 42.321 | 293 | 164 | 2 | 118 | 410 | 14 | 301 | 2.45e-86 | 266 |
| MS.gene031718.t1 | MTR_7g073320 | 34.211 | 114 | 61 | 3 | 301 | 414 | 12 | 111 | 3.30e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031718.t1 | AT2G20680 | 66.981 | 424 | 138 | 2 | 3 | 425 | 5 | 427 | 0.0 | 601 |
| MS.gene031718.t1 | AT4G28320 | 65.632 | 419 | 140 | 3 | 11 | 428 | 12 | 427 | 0.0 | 579 |
| MS.gene031718.t1 | AT5G01930 | 50.000 | 382 | 187 | 4 | 34 | 414 | 42 | 420 | 7.97e-135 | 395 |
| MS.gene031718.t1 | AT3G10900 | 42.750 | 400 | 224 | 4 | 13 | 410 | 3 | 399 | 3.34e-119 | 353 |
| MS.gene031718.t1 | AT3G10890 | 40.750 | 400 | 233 | 3 | 12 | 410 | 4 | 400 | 5.20e-117 | 348 |
| MS.gene031718.t1 | AT5G66460 | 43.158 | 380 | 211 | 2 | 39 | 418 | 31 | 405 | 7.53e-117 | 348 |
| MS.gene031718.t1 | AT1G02310 | 42.782 | 381 | 205 | 6 | 35 | 410 | 25 | 397 | 3.30e-110 | 330 |
| MS.gene031718.t1 | AT1G02310 | 45.533 | 347 | 177 | 5 | 35 | 377 | 45 | 383 | 4.73e-110 | 331 |
| MS.gene031718.t1 | AT3G30540 | 36.915 | 363 | 188 | 4 | 13 | 374 | 3 | 325 | 1.14e-81 | 254 |
Find 86 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAACTCTTATTGGTTTA+TGG | 0.112024 | 4.3:+30791630 | MS.gene031718:CDS |
| TCGGAGTTTATAGATGATTT+TGG | 0.131553 | 4.3:+30794561 | MS.gene031718:CDS |
| GCTCAAAGCTGGGGCTAAAA+TGG | 0.169600 | 4.3:+30791696 | MS.gene031718:CDS |
| TCAATGGATGGAACTCTTAT+TGG | 0.181552 | 4.3:+30791623 | MS.gene031718:CDS |
| CTATTCATTTACATGTCATT+TGG | 0.262409 | 4.3:+30791511 | MS.gene031718:CDS |
| AGCCTGGATGCCCACCCTTC+TGG | 0.268536 | 4.3:-30793757 | None:intergenic |
| TTGAAATAACTTCGGATTGA+TGG | 0.286181 | 4.3:-30793107 | None:intergenic |
| ACCGATGCAAAACAAAATAT+TGG | 0.294563 | 4.3:-30791484 | None:intergenic |
| TATTCATTTACATGTCATTT+GGG | 0.295499 | 4.3:+30791512 | MS.gene031718:CDS |
| ACGGTCCTAATGACCCAAAA+AGG | 0.350002 | 4.3:+30793719 | MS.gene031718:CDS |
| AAGAAACATCTGGTCACTAT+TGG | 0.350210 | 4.3:+30793682 | MS.gene031718:CDS |
| TGAAGTCAATATTTGAGGTC+TGG | 0.369260 | 4.3:-30793804 | None:intergenic |
| GTCTAACTGTTTGTAGAACT+TGG | 0.370629 | 4.3:+30791719 | MS.gene031718:CDS |
| TAACAAACGTGTTTGAAACT+TGG | 0.373125 | 4.3:-30794678 | None:intergenic |
| CCGGAGCAGGTGCTTTGGTT+TGG | 0.376363 | 4.3:+30794517 | MS.gene031718:CDS |
| GTAAATAACTTGCAAGCATA+TGG | 0.395677 | 4.3:+30793005 | MS.gene031718:CDS |
| CTGGTCACTATTGGACTTGA+AGG | 0.400223 | 4.3:+30793691 | MS.gene031718:CDS |
| CCGGTCCGGAGCAGGTGCTT+TGG | 0.400980 | 4.3:+30794512 | MS.gene031718:CDS |
| TGGGCGTGGCAAGAAGGGCT+AGG | 0.402527 | 4.3:+30793050 | MS.gene031718:CDS |
| CACCAGAAGGGTGGGCATCC+AGG | 0.412892 | 4.3:+30793755 | MS.gene031718:CDS |
| AGCTACATGATGGCTGGAAA+TGG | 0.423564 | 4.3:+30791451 | None:intergenic |
| ATAAAGAGTGAATACATTGA+TGG | 0.428290 | 4.3:-30794603 | None:intergenic |
| AAGCAAGGAGACATCGGATT+AGG | 0.430313 | 4.3:+30792967 | MS.gene031718:CDS |
| AACAAACGTGTTTGAAACTT+GGG | 0.434068 | 4.3:-30794677 | None:intergenic |
| CCATATTCAGAGAACAAAAC+AGG | 0.436387 | 4.3:-30794396 | None:intergenic |
| CGGTGTTTAACTGATCCTTC+TGG | 0.450965 | 4.3:+30793421 | MS.gene031718:CDS |
| TTTACATGTCATTTGGGGTA+AGG | 0.451772 | 4.3:+30791518 | MS.gene031718:CDS |
| ATGTTTGCTTACCAATGGTC+AGG | 0.457439 | 4.3:-30793844 | None:intergenic |
| CCAAACCAAAGCACCTGCTC+CGG | 0.458860 | 4.3:-30794517 | None:intergenic |
| CATGTCATTTGGGGTAAGGA+TGG | 0.459188 | 4.3:+30791522 | MS.gene031718:CDS |
| CTGGATGCCCACCCTTCTGG+TGG | 0.463462 | 4.3:-30793754 | None:intergenic |
| CTCAAAGCTGGGGCTAAAAT+GGG | 0.465149 | 4.3:+30791697 | MS.gene031718:CDS |
| GAAGTCAATATTTGAGGTCT+GGG | 0.470450 | 4.3:-30793803 | None:intergenic |
| ACCAATGGTCAGGATAGATA+TGG | 0.470920 | 4.3:-30793834 | None:intergenic |
| AGTAAATCCTTTGTTGACCT+TGG | 0.472514 | 4.3:-30794646 | None:intergenic |
| GTTCAGTGGGCGTGGCAAGA+AGG | 0.478816 | 4.3:+30793044 | MS.gene031718:CDS |
| TCTAACTGTTTGTAGAACTT+GGG | 0.480684 | 4.3:+30791720 | MS.gene031718:CDS |
| GGGTCTCAGTTTGTGTTGGA+TGG | 0.488014 | 4.3:+30791586 | MS.gene031718:CDS |
| TTGGTTTATGGTTCAATCTG+TGG | 0.490056 | 4.3:+30791642 | MS.gene031718:CDS |
| ATCAGTATGTTCAGTGGGCG+TGG | 0.490144 | 4.3:+30793036 | MS.gene031718:CDS |
| TTCAGTGGGCGTGGCAAGAA+GGG | 0.490402 | 4.3:+30793045 | MS.gene031718:CDS |
| GTAGGTGAAATGCTCAAAGC+TGG | 0.499749 | 4.3:+30791685 | MS.gene031718:CDS |
| ATCGATCGACAAGAAACATC+TGG | 0.501922 | 4.3:+30793672 | MS.gene031718:CDS |
| TTGGTTTGGCAGTTCTTAGT+CGG | 0.513236 | 4.3:+30794531 | MS.gene031718:CDS |
| GAAGGGTGGGCATCCAGGCT+TGG | 0.519805 | 4.3:+30793760 | MS.gene031718:CDS |
| TTGAGCATTTCACCTACCCT+AGG | 0.519825 | 4.3:-30791679 | None:intergenic |
| TACATTGATGGCCTTTCCCA+TGG | 0.530278 | 4.3:-30794591 | None:intergenic |
| AATAAAATCAGATCCAAGCC+TGG | 0.531507 | 4.3:-30793773 | None:intergenic |
| AAAGGGGTCTCAGTTTGTGT+TGG | 0.534536 | 4.3:+30791582 | MS.gene031718:CDS |
| TGGATGCCCACCCTTCTGGT+GGG | 0.540926 | 4.3:-30793753 | None:intergenic |
| AGAGGTGAAGTCAATATTTG+AGG | 0.543588 | 4.3:-30793809 | None:intergenic |
| TAGGTGAAATGCTCAAAGCT+GGG | 0.551531 | 4.3:+30791686 | MS.gene031718:CDS |
| GGGCGTGGCAAGAAGGGCTA+GGG | 0.551659 | 4.3:+30793051 | MS.gene031718:CDS |
| GTTTGGCAGTTCTTAGTCGG+TGG | 0.553048 | 4.3:+30794534 | MS.gene031718:CDS |
| TCCATATCTATCCTGACCAT+TGG | 0.556710 | 4.3:+30793833 | MS.gene031718:CDS |
| CCAAAGCACCTGCTCCGGAC+CGG | 0.557381 | 4.3:-30794512 | None:intergenic |
| TTGGGATGGTACCATGGGAA+AGG | 0.558037 | 4.3:+30794580 | MS.gene031718:CDS |
| AATAACTTGCAAGCATATGG+TGG | 0.563696 | 4.3:+30793008 | MS.gene031718:CDS |
| ATGCTTTCTCACATTGAAGA+TGG | 0.572573 | 4.3:+30794354 | MS.gene031718:CDS |
| GTTCTTAGTCGGTGGAATGT+CGG | 0.573923 | 4.3:+30794542 | MS.gene031718:CDS |
| GGAAAGATCAGTATGTTCAG+TGG | 0.575485 | 4.3:+30793030 | MS.gene031718:CDS |
| TGGATGCTTATACAAGACCT+AGG | 0.592318 | 4.3:+30791662 | MS.gene031718:CDS |
| ATAACTTGCAAGCATATGGT+GGG | 0.596743 | 4.3:+30793009 | MS.gene031718:CDS |
| TGTCAACCCACCAGAAGGGT+GGG | 0.604615 | 4.3:+30793747 | MS.gene031718:CDS |
| AATGCACTTCAGACTTCACC+TGG | 0.604731 | 4.3:+30791763 | MS.gene031718:CDS |
| GAAAGATCAGTATGTTCAGT+GGG | 0.608437 | 4.3:+30793031 | MS.gene031718:CDS |
| TTGACTGTCAACCCACCAGA+AGG | 0.612439 | 4.3:+30793742 | MS.gene031718:CDS |
| TTCTGCTATGACATAGTCCA+AGG | 0.612459 | 4.3:-30792946 | None:intergenic |
| ATTCATTTACATGTCATTTG+GGG | 0.615146 | 4.3:+30791513 | MS.gene031718:CDS |
| TGTCGCAGACTATTCTGACC+AGG | 0.615265 | 4.3:+30793326 | MS.gene031718:intron |
| CTGTCAACCCACCAGAAGGG+TGG | 0.616181 | 4.3:+30793746 | MS.gene031718:CDS |
| AATGTGAGAAAGCATCCACT+TGG | 0.626583 | 4.3:-30794346 | None:intergenic |
| TAGCAGAAGCAAGGAGACAT+CGG | 0.627342 | 4.3:+30792961 | MS.gene031718:CDS |
| GGATGCTTATACAAGACCTA+GGG | 0.627895 | 4.3:+30791663 | MS.gene031718:CDS |
| GAGAAAGCATCCACTTGGAG+AGG | 0.636971 | 4.3:-30794341 | None:intergenic |
| ATATGAAATTCCTCTCCAAG+TGG | 0.639292 | 4.3:+30794331 | MS.gene031718:CDS |
| ACTTGGAGAGTGTCACCAGA+AGG | 0.640926 | 4.3:-30793436 | None:intergenic |
| AGATTAACCAAGGTCAACAA+AGG | 0.651249 | 4.3:+30794639 | MS.gene031718:CDS |
| AGGTGAAATGCTCAAAGCTG+GGG | 0.652275 | 4.3:+30791687 | MS.gene031718:CDS |
| ACTATGTCATAGCAGAAGCA+AGG | 0.653190 | 4.3:+30792952 | MS.gene031718:CDS |
| TGACTGTCAACCCACCAGAA+GGG | 0.660952 | 4.3:+30793743 | MS.gene031718:CDS |
| GGGAACTGATCAATGAACCT+CGG | 0.676374 | 4.3:+30793401 | MS.gene031718:CDS |
| ACATTCATGCAGATTAACCA+AGG | 0.676561 | 4.3:+30794629 | MS.gene031718:CDS |
| GCTTATACAAGACCTAGGGT+AGG | 0.687838 | 4.3:+30791667 | MS.gene031718:CDS |
| GTCAGGATAGATATGGACAG+AGG | 0.702589 | 4.3:-30793827 | None:intergenic |
| GAAGGATCAGTTAAACACCG+AGG | 0.771230 | 4.3:-30793418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAATATATTTGAAG+GGG | - | chr4.3:30793485-30793504 | None:intergenic | 10.0% |
| !! | CAAATATATTTATTTATAGA+AGG | + | chr4.3:30793488-30793507 | MS.gene031718:intron | 10.0% |
| !! | CTATAAATAAATATATTTGA+AGG | - | chr4.3:30793487-30793506 | None:intergenic | 10.0% |
| !! | TTATTTCAAAAATTATGTTA+AGG | + | chr4.3:30793121-30793140 | MS.gene031718:CDS | 10.0% |
| !! | AAAAATACAACAAAATTTCA+GGG | - | chr4.3:30792020-30792039 | None:intergenic | 15.0% |
| !! | AAACAAATTATTGATAAGAT+AGG | - | chr4.3:30794157-30794176 | None:intergenic | 15.0% |
| !! | TAAAAATACAACAAAATTTC+AGG | - | chr4.3:30792021-30792040 | None:intergenic | 15.0% |
| !! | TAAATAAATATATTTGAAGG+GGG | - | chr4.3:30793484-30793503 | None:intergenic | 15.0% |
| !!! | AAACATTTTTCATTTCTATT+AGG | - | chr4.3:30792815-30792834 | None:intergenic | 15.0% |
| !!! | AATGTTTTTTTGTTTTGTAT+TGG | + | chr4.3:30792828-30792847 | MS.gene031718:intron | 15.0% |
| !!! | CATAATTTTTGAAATAACTT+CGG | - | chr4.3:30793118-30793137 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTATGATATGAT+TGG | + | chr4.3:30792030-30792049 | MS.gene031718:intron | 15.0% |
| !!! | TTTTGTATGTATAATATAAC+TGG | + | chr4.3:30792077-30792096 | MS.gene031718:intron | 15.0% |
| !! | ATGAATGAAAACTTTATTGA+GGG | + | chr4.3:30792907-30792926 | MS.gene031718:intron | 20.0% |
| !! | GAAGTATAATACAAAAAGAA+AGG | - | chr4.3:30792780-30792799 | None:intergenic | 20.0% |
| !! | GTTATTTGTGCTTAAATTTA+GGG | + | chr4.3:30792564-30792583 | MS.gene031718:intron | 20.0% |
| !! | TTATTTGTGCTTAAATTTAG+GGG | + | chr4.3:30792565-30792584 | MS.gene031718:intron | 20.0% |
| !!! | ATTTTCTAAATTTACACTTG+AGG | - | chr4.3:30792723-30792742 | None:intergenic | 20.0% |
| !!! | TATTCATTTACATGTCATTT+GGG | + | chr4.3:30791512-30791531 | MS.gene031718:CDS | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+AGG | - | chr4.3:30793960-30793979 | None:intergenic | 20.0% |
| ! | AAAATATGAAATTCAACACG+AGG | - | chr4.3:30791859-30791878 | None:intergenic | 25.0% |
| ! | AAACTAAAGAGGAAGAAAAA+CGG | - | chr4.3:30793162-30793181 | None:intergenic | 25.0% |
| ! | ATAAAGAGTGAATACATTGA+TGG | - | chr4.3:30794606-30794625 | None:intergenic | 25.0% |
| ! | ATCAGAAGAAAGATCTTAAA+AGG | - | chr4.3:30794196-30794215 | None:intergenic | 25.0% |
| ! | CAACAAAAAAGTTAAAGAGA+AGG | - | chr4.3:30791992-30792011 | None:intergenic | 25.0% |
| ! | CTATTCATTTACATGTCATT+TGG | + | chr4.3:30791511-30791530 | MS.gene031718:CDS | 25.0% |
| ! | GATGAATGAAAACTTTATTG+AGG | + | chr4.3:30792906-30792925 | MS.gene031718:intron | 25.0% |
| ! | GGTTATTTGTGCTTAAATTT+AGG | + | chr4.3:30792563-30792582 | MS.gene031718:intron | 25.0% |
| ! | TAGCATTATCAATGACAAAT+TGG | + | chr4.3:30793525-30793544 | MS.gene031718:intron | 25.0% |
| ! | TCAGAAGAAAGATCTTAAAA+GGG | - | chr4.3:30794195-30794214 | None:intergenic | 25.0% |
| ! | TGATTAAGACTAAGGATAAA+AGG | - | chr4.3:30792459-30792478 | None:intergenic | 25.0% |
| ! | TGGTAAATTGATTAAGACTA+AGG | - | chr4.3:30792467-30792486 | None:intergenic | 25.0% |
| !! | AAATTCTATATCTGCAGTTT+TGG | + | chr4.3:30793872-30793891 | MS.gene031718:intron | 25.0% |
| !! | AGAAATAGAGTTAAGTTTTG+TGG | + | chr4.3:30791555-30791574 | MS.gene031718:CDS | 25.0% |
| !! | AGGGGGAAATTTTTATTAAT+TGG | + | chr4.3:30792603-30792622 | MS.gene031718:intron | 25.0% |
| !! | ATTCATTTACATGTCATTTG+GGG | + | chr4.3:30791513-30791532 | MS.gene031718:CDS | 25.0% |
| !! | CCAATTTTGCAAAATTTGTA+GGG | + | chr4.3:30792146-30792165 | MS.gene031718:intron | 25.0% |
| !! | CCTACAAATTTTGCAAAATT+GGG | - | chr4.3:30792148-30792167 | None:intergenic | 25.0% |
| !! | TAGTCTTAATCAATTTACCA+TGG | + | chr4.3:30792467-30792486 | MS.gene031718:intron | 25.0% |
| !! | TATTTCTGTTGTTTGTCATT+GGG | + | chr4.3:30792374-30792393 | MS.gene031718:intron | 25.0% |
| !! | TTTTATACTCAAAGAAATCC+AGG | - | chr4.3:30793594-30793613 | None:intergenic | 25.0% |
| !! | TTTTGATGAACAAGCTTTTA+AGG | + | chr4.3:30791789-30791808 | MS.gene031718:CDS | 25.0% |
| !!! | TCCAATATTTTGTTTTGCAT+CGG | + | chr4.3:30791483-30791502 | MS.gene031718:CDS | 25.0% |
| !!! | TTAAGTTTTGTGGAAAGAAA+GGG | + | chr4.3:30791565-30791584 | MS.gene031718:CDS | 25.0% |
| !!! | TTATTTCTGTTGTTTGTCAT+TGG | + | chr4.3:30792373-30792392 | MS.gene031718:intron | 25.0% |
| !!! | TTTTGTATTGGTAACTCTTT+TGG | + | chr4.3:30792840-30792859 | MS.gene031718:intron | 25.0% |
| AAACAATGTTTGCTTACCAA+TGG | - | chr4.3:30793852-30793871 | None:intergenic | 30.0% | |
| AAAGAAATCCAGGAAAGAAT+GGG | - | chr4.3:30793584-30793603 | None:intergenic | 30.0% | |
| AAAGAATGGGATATTTGCAT+TGG | - | chr4.3:30793571-30793590 | None:intergenic | 30.0% | |
| AAATTTAGGGGAGAGAAAAT+TGG | + | chr4.3:30792577-30792596 | MS.gene031718:intron | 30.0% | |
| AACTAAAGAGGAAGAAAAAC+GGG | - | chr4.3:30793161-30793180 | None:intergenic | 30.0% | |
| AATTTAGGGGAGAGAAAATT+GGG | + | chr4.3:30792578-30792597 | MS.gene031718:intron | 30.0% | |
| ACAAATCTGCTAAGAAAAAC+CGG | + | chr4.3:30794493-30794512 | MS.gene031718:CDS | 30.0% | |
| ACCAGGAAAAATACTATTAC+TGG | + | chr4.3:30793343-30793362 | MS.gene031718:CDS | 30.0% | |
| ACCGATGCAAAACAAAATAT+TGG | - | chr4.3:30791487-30791506 | None:intergenic | 30.0% | |
| ACGTTGTATCAAAACTAAAG+AGG | - | chr4.3:30793173-30793192 | None:intergenic | 30.0% | |
| ATATATTTGAAGGGGGTTAA+AGG | - | chr4.3:30793477-30793496 | None:intergenic | 30.0% | |
| ATTAATTGGAGTGACAGTAA+TGG | + | chr4.3:30792617-30792636 | MS.gene031718:intron | 30.0% | |
| CAAAAGGCGAATAAAAACAA+AGG | - | chr4.3:30794280-30794299 | None:intergenic | 30.0% | |
| GACATGTTTATCATTGATCT+TGG | + | chr4.3:30792237-30792256 | MS.gene031718:intron | 30.0% | |
| GATAACTTTGTACGTGTAAT+TGG | + | chr4.3:30792101-30792120 | MS.gene031718:intron | 30.0% | |
| GCAACTAAAATTGAAATGTC+CGG | - | chr4.3:30793251-30793270 | None:intergenic | 30.0% | |
| TAGGGAAATAACATTTGAAG+TGG | + | chr4.3:30792164-30792183 | MS.gene031718:intron | 30.0% | |
| TATCAAACTCTCAACTATGT+CGG | - | chr4.3:30791932-30791951 | None:intergenic | 30.0% | |
| TCTAACTGTTTGTAGAACTT+GGG | + | chr4.3:30791720-30791739 | MS.gene031718:CDS | 30.0% | |
| TGTAATTGGTGAGATTCATT+CGG | + | chr4.3:30792115-30792134 | MS.gene031718:intron | 30.0% | |
| TTATCATTGATCTTGGAAAG+TGG | + | chr4.3:30792244-30792263 | MS.gene031718:intron | 30.0% | |
| TTGAAATAACTTCGGATTGA+TGG | - | chr4.3:30793110-30793129 | None:intergenic | 30.0% | |
| ! | AACAAACGTGTTTGAAACTT+GGG | - | chr4.3:30794680-30794699 | None:intergenic | 30.0% |
| ! | AAGCTTTTTACATCAATGGA+TGG | + | chr4.3:30791611-30791630 | MS.gene031718:CDS | 30.0% |
| ! | ATTGGACTTGAAGGTTTTTA+CGG | + | chr4.3:30793700-30793719 | MS.gene031718:CDS | 30.0% |
| ! | CCCAATTTTGCAAAATTTGT+AGG | + | chr4.3:30792145-30792164 | MS.gene031718:intron | 30.0% |
| ! | CCCTACAAATTTTGCAAAAT+TGG | - | chr4.3:30792149-30792168 | None:intergenic | 30.0% |
| ! | CGGAGTTTATAGATGATTTT+GGG | + | chr4.3:30794562-30794581 | MS.gene031718:CDS | 30.0% |
| ! | GGAAAAGCTTTTTACATCAA+TGG | + | chr4.3:30791607-30791626 | MS.gene031718:CDS | 30.0% |
| ! | GTAAATAACTTGCAAGCATA+TGG | + | chr4.3:30793005-30793024 | MS.gene031718:CDS | 30.0% |
| ! | GTTTTTCTTAGCAGATTTGT+GGG | - | chr4.3:30794493-30794512 | None:intergenic | 30.0% |
| ! | TAACAAACGTGTTTGAAACT+TGG | - | chr4.3:30794681-30794700 | None:intergenic | 30.0% |
| ! | TCCAGTAATAGTATTTTTCC+TGG | - | chr4.3:30793347-30793366 | None:intergenic | 30.0% |
| ! | TCGGAGTTTATAGATGATTT+TGG | + | chr4.3:30794561-30794580 | MS.gene031718:CDS | 30.0% |
| ! | TTGATAACTACTTAGACTGT+TGG | + | chr4.3:30791946-30791965 | MS.gene031718:intron | 30.0% |
| ! | TTTTTATTCGCCTTTTGTGT+AGG | + | chr4.3:30794283-30794302 | MS.gene031718:intron | 30.0% |
| !! | ATGGAACTCTTATTGGTTTA+TGG | + | chr4.3:30791630-30791649 | MS.gene031718:CDS | 30.0% |
| !! | GTTAAGTTTTGTGGAAAGAA+AGG | + | chr4.3:30791564-30791583 | MS.gene031718:CDS | 30.0% |
| !! | GTTTATAGATGATTTTGGGA+TGG | + | chr4.3:30794566-30794585 | MS.gene031718:CDS | 30.0% |
| !! | TAAGTTTTGTGGAAAGAAAG+GGG | + | chr4.3:30791566-30791585 | MS.gene031718:CDS | 30.0% |
| !! | TTGTTTTGTACATCTTCTCT+CGG | - | chr4.3:30794458-30794477 | None:intergenic | 30.0% |
| !!! | AATATTTTGTTTTGCATCGG+TGG | + | chr4.3:30791486-30791505 | MS.gene031718:CDS | 30.0% |
| !!! | CAAGATCTTTGTTTTCTGTT+TGG | + | chr4.3:30792872-30792891 | MS.gene031718:intron | 30.0% |
| !!! | TTCTTTGCTTTTTGTTTTGC+CGG | + | chr4.3:30793225-30793244 | MS.gene031718:intron | 30.0% |
| AAAACAAAGATCTTGCTCCA+TGG | - | chr4.3:30792867-30792886 | None:intergenic | 35.0% | |
| AAGAAACATCTGGTCACTAT+TGG | + | chr4.3:30793682-30793701 | MS.gene031718:CDS | 35.0% | |
| AATAAAATCAGATCCAAGCC+TGG | - | chr4.3:30793776-30793795 | None:intergenic | 35.0% | |
| ACATTCATGCAGATTAACCA+AGG | + | chr4.3:30794629-30794648 | MS.gene031718:CDS | 35.0% | |
| AGACTAAGGATAAAAGGAAC+AGG | - | chr4.3:30792453-30792472 | None:intergenic | 35.0% | |
| AGAGGTGAAGTCAATATTTG+AGG | - | chr4.3:30793812-30793831 | None:intergenic | 35.0% | |
| AGATTAACCAAGGTCAACAA+AGG | + | chr4.3:30794639-30794658 | MS.gene031718:CDS | 35.0% | |
| AGTAAATCCTTTGTTGACCT+TGG | - | chr4.3:30794649-30794668 | None:intergenic | 35.0% | |
| AGTTCCCAACCAAAAATGAT+AGG | - | chr4.3:30793388-30793407 | None:intergenic | 35.0% | |
| ATATGAAATTCCTCTCCAAG+TGG | + | chr4.3:30794331-30794350 | MS.gene031718:CDS | 35.0% | |
| ATGCTTTCTCACATTGAAGA+TGG | + | chr4.3:30794354-30794373 | MS.gene031718:CDS | 35.0% | |
| CAAAGAAATCCAGGAAAGAA+TGG | - | chr4.3:30793585-30793604 | None:intergenic | 35.0% | |
| CCATATTCAGAGAACAAAAC+AGG | - | chr4.3:30794399-30794418 | None:intergenic | 35.0% | |
| GAAAGATCAGTATGTTCAGT+GGG | + | chr4.3:30793031-30793050 | MS.gene031718:CDS | 35.0% | |
| GATTGGATGCTTTCAAAACA+AGG | + | chr4.3:30792047-30792066 | MS.gene031718:intron | 35.0% | |
| GCTTATGAAACCTACACAAA+AGG | - | chr4.3:30794296-30794315 | None:intergenic | 35.0% | |
| GTAATTGGTGAGATTCATTC+GGG | + | chr4.3:30792116-30792135 | MS.gene031718:intron | 35.0% | |
| GTCTAACTGTTTGTAGAACT+TGG | + | chr4.3:30791719-30791738 | MS.gene031718:CDS | 35.0% | |
| GTGGTATGATCATATGTGTT+AGG | + | chr4.3:30792263-30792282 | MS.gene031718:intron | 35.0% | |
| GTTCCCAACCAAAAATGATA+GGG | - | chr4.3:30793387-30793406 | None:intergenic | 35.0% | |
| TAAATTTACACTTGAGGTGC+TGG | - | chr4.3:30792717-30792736 | None:intergenic | 35.0% | |
| TACAGACAAAAAGTGAGAAG+CGG | + | chr4.3:30792294-30792313 | MS.gene031718:intron | 35.0% | |
| TACTGAAATCAGTCAACCAT+TGG | + | chr4.3:30792523-30792542 | MS.gene031718:intron | 35.0% | |
| TATCAGGAAGAAATACACCA+TGG | - | chr4.3:30792487-30792506 | None:intergenic | 35.0% | |
| TCAATGGATGGAACTCTTAT+TGG | + | chr4.3:30791623-30791642 | MS.gene031718:CDS | 35.0% | |
| TCCTATAGAGCTGAAATTTG+AGG | + | chr4.3:30792215-30792234 | MS.gene031718:intron | 35.0% | |
| TCCTCAAATTTCAGCTCTAT+AGG | - | chr4.3:30792219-30792238 | None:intergenic | 35.0% | |
| TGACAAATTGGACATTGAAG+TGG | + | chr4.3:30793537-30793556 | MS.gene031718:intron | 35.0% | |
| TGGTGTATTTCTTCCTGATA+TGG | + | chr4.3:30792487-30792506 | MS.gene031718:intron | 35.0% | |
| TTGGTTTATGGTTCAATCTG+TGG | + | chr4.3:30791642-30791661 | MS.gene031718:CDS | 35.0% | |
| ! | AATAACTTGCAAGCATATGG+TGG | + | chr4.3:30793008-30793027 | MS.gene031718:CDS | 35.0% |
| ! | AGAACTTGGGCTTTTAATGA+TGG | + | chr4.3:30791733-30791752 | MS.gene031718:CDS | 35.0% |
| ! | AGACATGACCCTATCATTTT+TGG | + | chr4.3:30793376-30793395 | MS.gene031718:CDS | 35.0% |
| ! | ATAACTTGCAAGCATATGGT+GGG | + | chr4.3:30793009-30793028 | MS.gene031718:CDS | 35.0% |
| ! | GAAGTCAATATTTGAGGTCT+GGG | - | chr4.3:30793806-30793825 | None:intergenic | 35.0% |
| ! | GGCTTGGATCTGATTTTATT+AGG | + | chr4.3:30793776-30793795 | MS.gene031718:CDS | 35.0% |
| ! | GGTTTTTCTTAGCAGATTTG+TGG | - | chr4.3:30794494-30794513 | None:intergenic | 35.0% |
| ! | TGAAGTCAATATTTGAGGTC+TGG | - | chr4.3:30793807-30793826 | None:intergenic | 35.0% |
| ! | TTTACATGTCATTTGGGGTA+AGG | + | chr4.3:30791518-30791537 | MS.gene031718:CDS | 35.0% |
| !! | CCTGTTTTGTTCTCTGAATA+TGG | + | chr4.3:30794396-30794415 | MS.gene031718:CDS | 35.0% |
| !!! | ATGACCCTATCATTTTTGGT+TGG | + | chr4.3:30793380-30793399 | MS.gene031718:CDS | 35.0% |
| !!! | TGACCCTATCATTTTTGGTT+GGG | + | chr4.3:30793381-30793400 | MS.gene031718:CDS | 35.0% |
| AAGAGGAAGAAAAACGGGAT+AGG | - | chr4.3:30793156-30793175 | None:intergenic | 40.0% | |
| ACCAATGGTCAGGATAGATA+TGG | - | chr4.3:30793837-30793856 | None:intergenic | 40.0% | |
| ACTATGTCATAGCAGAAGCA+AGG | + | chr4.3:30792952-30792971 | MS.gene031718:CDS | 40.0% | |
| ATCGATCGACAAGAAACATC+TGG | + | chr4.3:30793672-30793691 | MS.gene031718:CDS | 40.0% | |
| ATGTTTGCTTACCAATGGTC+AGG | - | chr4.3:30793847-30793866 | None:intergenic | 40.0% | |
| CTAAAATTGAAATGTCCGGC+CGG | - | chr4.3:30793247-30793266 | None:intergenic | 40.0% | |
| CTTAATTGCCATAGAACTGC+AGG | + | chr4.3:30793618-30793637 | MS.gene031718:intron | 40.0% | |
| GCAAATATCCCATTCTTTCC+TGG | + | chr4.3:30793573-30793592 | MS.gene031718:intron | 40.0% | |
| GCTTGTTCATCAAAAACACC+AGG | - | chr4.3:30791784-30791803 | None:intergenic | 40.0% | |
| GGAAAGATCAGTATGTTCAG+TGG | + | chr4.3:30793030-30793049 | MS.gene031718:CDS | 40.0% | |
| GGATGCTTATACAAGACCTA+GGG | + | chr4.3:30791663-30791682 | MS.gene031718:CDS | 40.0% | |
| TAGGTGAAATGCTCAAAGCT+GGG | + | chr4.3:30791686-30791705 | MS.gene031718:CDS | 40.0% | |
| TATCCAATCCTGCAGTTCTA+TGG | - | chr4.3:30793629-30793648 | None:intergenic | 40.0% | |
| TCCATATCTATCCTGACCAT+TGG | + | chr4.3:30793833-30793852 | MS.gene031718:CDS | 40.0% | |
| TGGATGCTTATACAAGACCT+AGG | + | chr4.3:30791662-30791681 | MS.gene031718:CDS | 40.0% | |
| TGTAGCAACAACACTTCAGA+TGG | - | chr4.3:30794050-30794069 | None:intergenic | 40.0% | |
| TTCTGCTATGACATAGTCCA+AGG | - | chr4.3:30792949-30792968 | None:intergenic | 40.0% | |
| ! | ATCAAAACTCGACTTGCCAA+TGG | - | chr4.3:30792542-30792561 | None:intergenic | 40.0% |
| ! | GGTTGACAGTCAACCTTTTT+GGG | - | chr4.3:30793735-30793754 | None:intergenic | 40.0% |
| !! | AATGTGAGAAAGCATCCACT+TGG | - | chr4.3:30794349-30794368 | None:intergenic | 40.0% |
| !! | ATTGGCAAGTCGAGTTTTGA+TGG | + | chr4.3:30792541-30792560 | MS.gene031718:intron | 40.0% |
| !! | TGAAGCATTGACACAAACAC+CGG | + | chr4.3:30793912-30793931 | MS.gene031718:intron | 40.0% |
| !! | TGGTCATTTTACAACTACCC+CGG | + | chr4.3:30792637-30792656 | MS.gene031718:intron | 40.0% |
| !! | TTGGCAAGTCGAGTTTTGAT+GGG | + | chr4.3:30792542-30792561 | MS.gene031718:intron | 40.0% |
| !! | TTGGTAACTCTTTTGGTCCA+TGG | + | chr4.3:30792847-30792866 | MS.gene031718:intron | 40.0% |
| !! | TTGGTTTGGCAGTTCTTAGT+CGG | + | chr4.3:30794531-30794550 | MS.gene031718:CDS | 40.0% |
| !!! | ATGATTTTGGGATGGTACCA+TGG | + | chr4.3:30794574-30794593 | MS.gene031718:CDS | 40.0% |
| !!! | GTCAACCTTTTTGGGTCATT+AGG | - | chr4.3:30793727-30793746 | None:intergenic | 40.0% |
| !!! | TGATTTTGGGATGGTACCAT+GGG | + | chr4.3:30794575-30794594 | MS.gene031718:CDS | 40.0% |
| AAAACCTTCCCTTCTGTAGG+TGG | - | chr4.3:30794096-30794115 | None:intergenic | 45.0% | |
| AAAGGGGTCTCAGTTTGTGT+TGG | + | chr4.3:30791582-30791601 | MS.gene031718:CDS | 45.0% | |
| AAGCAAGGAGACATCGGATT+AGG | + | chr4.3:30792967-30792986 | MS.gene031718:CDS | 45.0% | |
| AATGCACTTCAGACTTCACC+TGG | + | chr4.3:30791763-30791782 | MS.gene031718:CDS | 45.0% | |
| ACGGTCCTAATGACCCAAAA+AGG | + | chr4.3:30793719-30793738 | MS.gene031718:CDS | 45.0% | |
| AGAGAACTCCACCTACAGAA+GGG | + | chr4.3:30794085-30794104 | MS.gene031718:intron | 45.0% | |
| AGGGGAGAGAAAATTGGGAA+AGG | + | chr4.3:30792583-30792602 | MS.gene031718:intron | 45.0% | |
| AGGTGAAATGCTCAAAGCTG+GGG | + | chr4.3:30791687-30791706 | MS.gene031718:CDS | 45.0% | |
| CAGAAAACCTTCCCTTCTGT+AGG | - | chr4.3:30794099-30794118 | None:intergenic | 45.0% | |
| CGATGTGTCAGTGTATTGTC+CGG | - | chr4.3:30793934-30793953 | None:intergenic | 45.0% | |
| CGGTGTTTAACTGATCCTTC+TGG | + | chr4.3:30793421-30793440 | MS.gene031718:CDS | 45.0% | |
| CTCAAAGCTGGGGCTAAAAT+GGG | + | chr4.3:30791697-30791716 | MS.gene031718:CDS | 45.0% | |
| CTGACACAACATGAAGATGC+AGG | + | chr4.3:30792414-30792433 | MS.gene031718:intron | 45.0% | |
| CTGGTCACTATTGGACTTGA+AGG | + | chr4.3:30793691-30793710 | MS.gene031718:CDS | 45.0% | |
| GAAGGATCAGTTAAACACCG+AGG | - | chr4.3:30793421-30793440 | None:intergenic | 45.0% | |
| GCAACAACACTTCAGATGGA+AGG | - | chr4.3:30794046-30794065 | None:intergenic | 45.0% | |
| GCTTATACAAGACCTAGGGT+AGG | + | chr4.3:30791667-30791686 | MS.gene031718:CDS | 45.0% | |
| GGAGAGAAAATTGGGAAAGG+GGG | + | chr4.3:30792586-30792605 | MS.gene031718:intron | 45.0% | |
| GGGAACTGATCAATGAACCT+CGG | + | chr4.3:30793401-30793420 | MS.gene031718:CDS | 45.0% | |
| GGGAGAGAAAATTGGGAAAG+GGG | + | chr4.3:30792585-30792604 | MS.gene031718:intron | 45.0% | |
| GGGGAGAGAAAATTGGGAAA+GGG | + | chr4.3:30792584-30792603 | MS.gene031718:intron | 45.0% | |
| GTAGGTGAAATGCTCAAAGC+TGG | + | chr4.3:30791685-30791704 | MS.gene031718:CDS | 45.0% | |
| GTCAGGATAGATATGGACAG+AGG | - | chr4.3:30793830-30793849 | None:intergenic | 45.0% | |
| GTTCTTAGTCGGTGGAATGT+CGG | + | chr4.3:30794542-30794561 | MS.gene031718:CDS | 45.0% | |
| TAGCAGAAGCAAGGAGACAT+CGG | + | chr4.3:30792961-30792980 | MS.gene031718:CDS | 45.0% | |
| TCTGCTAAGAAAAACCGGTC+CGG | + | chr4.3:30794498-30794517 | MS.gene031718:CDS | 45.0% | |
| TGCAAAGTTCAAATCCCCTC+CGG | - | chr4.3:30792659-30792678 | None:intergenic | 45.0% | |
| TGGTGAGATTCATTCGGGAA+GGG | + | chr4.3:30792121-30792140 | MS.gene031718:intron | 45.0% | |
| TTGAGCATTTCACCTACCCT+AGG | - | chr4.3:30791682-30791701 | None:intergenic | 45.0% | |
| TTGCCATAGAACTGCAGGAT+TGG | + | chr4.3:30793623-30793642 | MS.gene031718:intron | 45.0% | |
| TTGGTGAGATTCATTCGGGA+AGG | + | chr4.3:30792120-30792139 | MS.gene031718:intron | 45.0% | |
| TTTGAAGGGGGTTAAAGGAC+AGG | - | chr4.3:30793472-30793491 | None:intergenic | 45.0% | |
| ! | AGAAGCGCAAACACCATATC+AGG | - | chr4.3:30792503-30792522 | None:intergenic | 45.0% |
| ! | ATTTTACAACTACCCCGGAG+GGG | + | chr4.3:30792642-30792661 | MS.gene031718:intron | 45.0% |
| ! | CATGTCATTTGGGGTAAGGA+TGG | + | chr4.3:30791522-30791541 | MS.gene031718:CDS | 45.0% |
| ! | CATTTTACAACTACCCCGGA+GGG | + | chr4.3:30792641-30792660 | MS.gene031718:intron | 45.0% |
| ! | GGGTTGACAGTCAACCTTTT+TGG | - | chr4.3:30793736-30793755 | None:intergenic | 45.0% |
| ! | TACATTGATGGCCTTTCCCA+TGG | - | chr4.3:30794594-30794613 | None:intergenic | 45.0% |
| ! | TCATTTTACAACTACCCCGG+AGG | + | chr4.3:30792640-30792659 | MS.gene031718:intron | 45.0% |
| !!! | TTGAGGGTTTTTTGCGTGAC+AGG | + | chr4.3:30792923-30792942 | MS.gene031718:intron | 45.0% |
| !!! | TTGCTTTTTGTTTTGCCGGC+CGG | + | chr4.3:30793229-30793248 | MS.gene031718:intron | 45.0% |
| !! | TATAAATAAATATATTTGAA+GGG | - | chr4.3:30793486-30793505 | None:intergenic | 5.0% |
| AACTCCACCTACAGAAGGGA+AGG | + | chr4.3:30794089-30794108 | MS.gene031718:intron | 50.0% | |
| ATCAGTATGTTCAGTGGGCG+TGG | + | chr4.3:30793036-30793055 | MS.gene031718:CDS | 50.0% | |
| ATGTTTGCAGTCGTCGAGTC+TGG | + | chr4.3:30793271-30793290 | MS.gene031718:intron | 50.0% | |
| CAAAGTTCAAATCCCCTCCG+GGG | - | chr4.3:30792657-30792676 | None:intergenic | 50.0% | |
| CAGAGAACTCCACCTACAGA+AGG | + | chr4.3:30794084-30794103 | MS.gene031718:intron | 50.0% | |
| CTTCTGTAGGTGGAGTTCTC+TGG | - | chr4.3:30794086-30794105 | None:intergenic | 50.0% | |
| GCAAAGTTCAAATCCCCTCC+GGG | - | chr4.3:30792658-30792677 | None:intergenic | 50.0% | |
| GCTCAAAGCTGGGGCTAAAA+TGG | + | chr4.3:30791696-30791715 | MS.gene031718:CDS | 50.0% | |
| GGACAGGTGCATGACTTACT+TGG | - | chr4.3:30793456-30793475 | None:intergenic | 50.0% | |
| GGGTCTCAGTTTGTGTTGGA+TGG | + | chr4.3:30791586-30791605 | MS.gene031718:CDS | 50.0% | |
| GTTTGGCAGTTCTTAGTCGG+TGG | + | chr4.3:30794534-30794553 | MS.gene031718:CDS | 50.0% | |
| TGACTGTCAACCCACCAGAA+GGG | + | chr4.3:30793743-30793762 | MS.gene031718:CDS | 50.0% | |
| TGTCGCAGACTATTCTGACC+AGG | + | chr4.3:30793326-30793345 | MS.gene031718:intron | 50.0% | |
| TTGACTGTCAACCCACCAGA+AGG | + | chr4.3:30793742-30793761 | MS.gene031718:CDS | 50.0% | |
| TTGGGATGGTACCATGGGAA+AGG | + | chr4.3:30794580-30794599 | MS.gene031718:CDS | 50.0% | |
| !! | ACTTGGAGAGTGTCACCAGA+AGG | - | chr4.3:30793439-30793458 | None:intergenic | 50.0% |
| !! | GAGAAAGCATCCACTTGGAG+AGG | - | chr4.3:30794344-30794363 | None:intergenic | 50.0% |
| !!! | GTTTTTTGCGTGACAGGCCT+TGG | + | chr4.3:30792929-30792948 | MS.gene031718:intron | 50.0% |
| AAGAAAAACCGGTCCGGAGC+AGG | + | chr4.3:30794504-30794523 | MS.gene031718:CDS | 55.0% | |
| GTCTGATGCGTACATCGACG+CGG | - | chr4.3:30794013-30794032 | None:intergenic | 55.0% | |
| TGTCAACCCACCAGAAGGGT+GGG | + | chr4.3:30793747-30793766 | MS.gene031718:CDS | 55.0% | |
| TTCAGTGGGCGTGGCAAGAA+GGG | + | chr4.3:30793045-30793064 | MS.gene031718:CDS | 55.0% | |
| ! | CCAAACCAAAGCACCTGCTC+CGG | - | chr4.3:30794520-30794539 | None:intergenic | 55.0% |
| CCGGAGCAGGTGCTTTGGTT+TGG | + | chr4.3:30794517-30794536 | MS.gene031718:CDS | 60.0% | |
| CTGTCAACCCACCAGAAGGG+TGG | + | chr4.3:30793746-30793765 | MS.gene031718:CDS | 60.0% | |
| GTTCAGTGGGCGTGGCAAGA+AGG | + | chr4.3:30793044-30793063 | MS.gene031718:CDS | 60.0% | |
| TGGATGCCCACCCTTCTGGT+GGG | - | chr4.3:30793756-30793775 | None:intergenic | 60.0% | |
| !! | CACTTGAGGTGCTGGCTCAG+CGG | - | chr4.3:30792709-30792728 | None:intergenic | 60.0% |
| AGCCTGGATGCCCACCCTTC+TGG | - | chr4.3:30793760-30793779 | None:intergenic | 65.0% | |
| CACCAGAAGGGTGGGCATCC+AGG | + | chr4.3:30793755-30793774 | MS.gene031718:CDS | 65.0% | |
| CTGGATGCCCACCCTTCTGG+TGG | - | chr4.3:30793757-30793776 | None:intergenic | 65.0% | |
| GAAGGGTGGGCATCCAGGCT+TGG | + | chr4.3:30793760-30793779 | MS.gene031718:CDS | 65.0% | |
| GGGCGTGGCAAGAAGGGCTA+GGG | + | chr4.3:30793051-30793070 | MS.gene031718:CDS | 65.0% | |
| TGGGCGTGGCAAGAAGGGCT+AGG | + | chr4.3:30793050-30793069 | MS.gene031718:CDS | 65.0% | |
| ! | CCAAAGCACCTGCTCCGGAC+CGG | - | chr4.3:30794515-30794534 | None:intergenic | 65.0% |
| !! | CGACGCGGCACTGACACATG+TGG | - | chr4.3:30793998-30794017 | None:intergenic | 65.0% |
| CCGGTCCGGAGCAGGTGCTT+TGG | + | chr4.3:30794512-30794531 | MS.gene031718:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 30791457 | 30794701 | 30791457 | ID=MS.gene031718 |
| chr4.3 | mRNA | 30791457 | 30794701 | 30791457 | ID=MS.gene031718.t1;Parent=MS.gene031718 |
| chr4.3 | exon | 30791457 | 30791810 | 30791457 | ID=MS.gene031718.t1.exon1;Parent=MS.gene031718.t1 |
| chr4.3 | CDS | 30791457 | 30791810 | 30791457 | ID=cds.MS.gene031718.t1;Parent=MS.gene031718.t1 |
| chr4.3 | exon | 30792945 | 30793142 | 30792945 | ID=MS.gene031718.t1.exon2;Parent=MS.gene031718.t1 |
| chr4.3 | CDS | 30792945 | 30793142 | 30792945 | ID=cds.MS.gene031718.t1;Parent=MS.gene031718.t1 |
| chr4.3 | exon | 30793334 | 30793456 | 30793334 | ID=MS.gene031718.t1.exon3;Parent=MS.gene031718.t1 |
| chr4.3 | CDS | 30793334 | 30793456 | 30793334 | ID=cds.MS.gene031718.t1;Parent=MS.gene031718.t1 |
| chr4.3 | exon | 30793640 | 30793854 | 30793640 | ID=MS.gene031718.t1.exon4;Parent=MS.gene031718.t1 |
| chr4.3 | CDS | 30793640 | 30793854 | 30793640 | ID=cds.MS.gene031718.t1;Parent=MS.gene031718.t1 |
| chr4.3 | exon | 30794305 | 30794701 | 30794305 | ID=MS.gene031718.t1.exon5;Parent=MS.gene031718.t1 |
| chr4.3 | CDS | 30794305 | 30794701 | 30794305 | ID=cds.MS.gene031718.t1;Parent=MS.gene031718.t1 |
| Gene Sequence |
| Protein sequence |
