AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033496

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033496.t1 MTR_7g080410 99.369 317 2 0 1 317 1 317 0.0 647
MS.gene033496.t1 MTR_7g080410 92.744 317 1 1 1 317 1 295 0.0 587
MS.gene033496.t1 MTR_8g096620 34.513 226 136 8 36 257 43 260 4.55e-24 100
MS.gene033496.t1 MTR_7g063260 29.612 206 139 5 26 230 4 204 1.39e-20 89.7
MS.gene033496.t1 MTR_7g063360 29.327 208 135 3 26 229 4 203 1.83e-20 89.4
MS.gene033496.t1 MTR_7g063270 29.126 206 140 5 26 230 4 204 6.89e-20 87.8
MS.gene033496.t1 MTR_7g063390 29.412 204 140 4 26 229 4 203 2.35e-19 86.3
MS.gene033496.t1 MTR_3g086210 31.047 277 160 15 5 269 16 273 6.49e-19 85.9
MS.gene033496.t1 MTR_7g063330 29.630 189 121 4 45 229 22 202 1.05e-18 84.3
MS.gene033496.t1 MTR_8g089575 30.800 250 162 7 1 244 6 250 1.26e-18 85.1
MS.gene033496.t1 MTR_8g096580 32.308 195 126 5 36 229 43 232 1.72e-18 84.7
MS.gene033496.t1 MTR_7g063320 28.500 200 139 4 30 229 7 202 8.24e-18 82.0
MS.gene033496.t1 MTR_7g105590 32.292 192 121 4 38 227 8 192 1.62e-17 79.7
MS.gene033496.t1 MTR_2g022600 31.535 241 138 8 30 263 25 245 9.26e-17 80.5
MS.gene033496.t1 MTR_7g094520 27.184 206 143 4 28 229 1 203 1.02e-16 79.0
MS.gene033496.t1 MTR_4g058810 30.049 203 134 6 28 225 1 200 1.30e-15 75.9
MS.gene033496.t1 MTR_4g134660 29.592 196 128 5 38 229 6 195 1.37e-15 75.1
MS.gene033496.t1 MTR_4g058840 30.808 198 130 5 32 225 6 200 1.87e-15 75.5
MS.gene033496.t1 MTR_4g058820 30.808 198 130 5 32 225 6 200 1.87e-15 75.5
MS.gene033496.t1 MTR_3g087850 27.985 268 153 10 42 281 30 285 2.01e-15 75.9
MS.gene033496.t1 MTR_7g094510 27.835 194 137 3 38 229 6 198 5.61e-15 73.9
MS.gene033496.t1 MTR_4g064887 28.342 187 126 3 45 229 22 202 4.58e-14 70.9
MS.gene033496.t1 MTR_7g107670 29.897 194 126 5 38 229 33 218 5.36e-14 71.6
MS.gene033496.t1 MTR_4g064887 28.342 187 126 3 45 229 22 202 1.62e-13 69.7
MS.gene033496.t1 MTR_4g131740 26.293 232 151 5 26 241 29 256 2.95e-13 69.3
MS.gene033496.t1 MTR_3g085740 26.829 205 144 5 26 229 63 262 5.99e-13 68.9
MS.gene033496.t1 MTR_4g132850 27.513 189 130 5 41 229 10 191 3.96e-12 65.5
MS.gene033496.t1 MTR_7g083870 26.804 194 133 4 38 229 35 221 4.17e-12 66.2
MS.gene033496.t1 MTR_7g105580 30.928 194 107 5 38 229 8 176 4.33e-12 65.5
MS.gene033496.t1 MTR_7g113650 28.571 210 126 8 32 229 35 232 6.89e-12 65.5
MS.gene033496.t1 MTR_3g087860 31.655 139 90 4 97 234 65 199 7.09e-12 65.1
MS.gene033496.t1 MTR_3g068175 26.289 194 135 5 38 229 17 204 1.07e-11 64.7
MS.gene033496.t1 MTR_3g068065 27.322 183 123 5 45 224 24 199 1.25e-11 64.3
MS.gene033496.t1 MTR_7g071680 27.751 209 137 6 26 230 19 217 1.50e-11 64.3
MS.gene033496.t1 MTR_4g064883 26.882 186 132 2 45 230 21 202 2.13e-11 62.8
MS.gene033496.t1 MTR_5g008850 27.962 211 128 8 36 234 43 241 2.32e-11 64.3
MS.gene033496.t1 MTR_4g097510 26.425 193 131 6 39 229 3 186 3.01e-11 63.5
MS.gene033496.t1 MTR_1563s0010 31.651 218 128 10 41 246 112 320 5.90e-11 63.2
MS.gene033496.t1 MTR_3g113870 28.495 186 123 5 46 229 29 206 7.29e-11 61.6
MS.gene033496.t1 MTR_3g068085 25.556 180 130 3 45 224 22 197 8.94e-11 62.0
MS.gene033496.t1 MTR_4g064883 26.882 186 132 2 45 230 21 202 9.94e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033496.t1 AT3G03330 71.569 306 81 2 16 315 19 324 4.60e-161 452
MS.gene033496.t1 AT3G03350 64.957 117 36 1 135 246 172 288 1.24e-47 162
MS.gene033496.t1 AT3G03350 64.957 117 36 1 135 246 258 374 1.35e-46 161
MS.gene033496.t1 AT3G47350 36.842 228 134 8 5 229 10 230 1.61e-25 103
MS.gene033496.t1 AT3G47350 36.842 228 134 8 5 229 10 230 2.66e-25 103
MS.gene033496.t1 AT3G47360 34.667 225 134 8 10 229 15 231 7.58e-24 99.8
MS.gene033496.t1 AT5G50600 34.653 202 123 6 41 240 48 242 2.03e-22 96.3
MS.gene033496.t1 AT5G50700 34.653 202 123 6 41 240 48 242 2.03e-22 96.3
MS.gene033496.t1 AT1G10310 31.122 196 127 3 35 229 12 200 3.96e-19 85.1
MS.gene033496.t1 AT5G50690 31.034 232 146 8 3 233 17 235 7.22e-19 84.7
MS.gene033496.t1 AT5G50590 31.034 232 146 8 3 233 17 235 7.22e-19 84.7
MS.gene033496.t1 AT5G50690 30.508 236 142 8 3 233 17 235 9.55e-19 85.1
MS.gene033496.t1 AT5G50590 30.508 236 142 8 3 233 17 235 9.55e-19 85.1
MS.gene033496.t1 AT5G10050 28.269 283 152 12 39 289 6 269 1.58e-17 81.6
MS.gene033496.t1 AT1G63380 30.732 205 134 5 26 225 6 207 3.73e-17 80.5
MS.gene033496.t1 AT4G10020 31.841 201 128 6 36 234 45 238 3.73e-17 81.6
MS.gene033496.t1 AT3G46170 30.622 209 136 6 22 225 11 215 3.87e-17 80.5
MS.gene033496.t1 AT1G63380 29.130 230 140 6 1 225 1 212 4.61e-17 80.5
MS.gene033496.t1 AT2G29360 29.703 202 133 6 30 229 9 203 5.00e-17 80.1
MS.gene033496.t1 AT5G65205 30.303 198 126 6 39 234 7 194 5.00e-17 80.1
MS.gene033496.t1 AT1G62610 30.244 205 133 6 27 225 3 203 5.40e-17 80.1
MS.gene033496.t1 AT3G03980 30.198 202 123 5 41 229 17 213 5.66e-17 79.7
MS.gene033496.t1 AT1G62610 30.244 205 133 6 27 225 4 204 5.81e-17 79.7
MS.gene033496.t1 AT3G55310 30.732 205 133 6 26 225 6 206 6.21e-17 79.7
MS.gene033496.t1 AT1G62610 30.244 205 133 6 27 225 5 205 6.76e-17 79.7
MS.gene033496.t1 AT1G62610 30.244 205 133 6 27 225 9 209 8.09e-17 79.7
MS.gene033496.t1 AT1G63380 30.392 204 134 5 27 225 5 205 1.66e-16 78.6
MS.gene033496.t1 AT1G63380 30.392 204 134 5 27 225 9 209 1.98e-16 78.6
MS.gene033496.t1 AT2G17845 27.354 223 153 4 38 253 47 267 2.24e-16 78.6
MS.gene033496.t1 AT3G06060 29.661 236 147 6 30 262 29 248 3.23e-16 78.6
MS.gene033496.t1 AT3G06060 29.661 236 147 6 30 262 46 265 3.53e-16 78.6
MS.gene033496.t1 AT1G07440 29.592 196 126 4 38 229 12 199 1.40e-15 75.9
MS.gene033496.t1 AT3G55290 30.732 205 133 6 26 225 6 206 1.47e-15 75.9
MS.gene033496.t1 AT4G13180 31.818 198 118 6 41 229 16 205 1.86e-15 75.5
MS.gene033496.t1 AT3G55290 31.156 199 128 6 32 225 13 207 2.01e-15 75.5
MS.gene033496.t1 AT1G67730 31.720 186 116 8 45 224 56 236 2.39e-15 75.9
MS.gene033496.t1 AT5G18210 27.835 194 134 4 41 229 11 203 3.03e-15 74.7
MS.gene033496.t1 AT2G29150 30.846 201 133 6 29 229 8 202 3.36e-15 74.7
MS.gene033496.t1 AT3G26760 28.866 194 129 4 38 229 36 222 3.38e-15 75.1
MS.gene033496.t1 AT5G18210 27.835 194 134 4 41 229 11 203 3.75e-15 74.7
MS.gene033496.t1 AT2G29370 28.500 200 138 5 30 229 9 203 8.37e-15 73.6
MS.gene033496.t1 AT2G29350 29.189 185 127 4 45 229 22 202 9.85e-15 72.8
MS.gene033496.t1 AT1G54870 30.472 233 133 9 29 241 76 299 1.27e-14 73.9
MS.gene033496.t1 AT1G54870 30.472 233 133 9 29 241 74 297 1.35e-14 73.9
MS.gene033496.t1 AT3G26770 28.061 196 128 4 38 229 41 227 2.51e-14 72.8
MS.gene033496.t1 AT2G29350 29.189 185 127 4 45 229 22 202 3.62e-14 71.6
MS.gene033496.t1 AT5G50770 28.037 214 145 6 36 247 43 249 3.89e-14 72.4
MS.gene033496.t1 AT3G04000 28.218 202 128 7 41 229 17 214 4.50e-14 71.6
MS.gene033496.t1 AT5G19200 30.688 189 120 5 44 229 41 221 1.32e-13 70.9
MS.gene033496.t1 AT4G03140 30.412 194 127 5 38 230 78 264 1.61e-13 70.9
MS.gene033496.t1 AT1G24470 29.461 241 152 9 5 237 16 246 1.03e-12 68.2
MS.gene033496.t1 AT5G06060 28.351 194 127 4 41 230 12 197 1.16e-12 67.4
MS.gene033496.t1 AT1G24360 26.667 195 133 5 38 229 74 261 1.17e-12 68.2
MS.gene033496.t1 AT1G52340 29.707 239 161 6 41 276 21 255 1.28e-12 67.4
MS.gene033496.t1 AT2G29290 26.344 186 131 4 45 229 14 194 3.25e-12 66.2
MS.gene033496.t1 AT2G47130 29.500 200 128 5 38 233 6 196 1.01e-11 64.7
MS.gene033496.t1 AT2G47120 26.872 227 151 5 38 258 6 223 2.52e-11 63.5
MS.gene033496.t1 AT2G47120 26.872 227 151 5 38 258 7 224 2.70e-11 63.2
MS.gene033496.t1 AT1G07440 28.070 171 111 4 38 204 12 174 2.92e-11 61.6

Find 76 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCAAAATATGCACTAAA+TGG 0.167869 7.3:-27106222 MS.gene033496:CDS
TGCCGCAACTCATGGCTTAA+AGG 0.228023 7.3:-27105026 MS.gene033496:CDS
TATTCTTTGAGCCTGCTATT+TGG 0.229244 7.3:-27104638 MS.gene033496:CDS
GCTCAACAACTTGCAAGTTT+AGG 0.229765 7.3:-27107748 MS.gene033496:CDS
CTCAACAACTTGCAAGTTTA+GGG 0.247419 7.3:-27107747 MS.gene033496:CDS
AGAGTTATTTGCTGTTTCTA+TGG 0.249623 7.3:+27106040 None:intergenic
TCTTCAATTAGTTCATGTTT+TGG 0.284039 7.3:+27108607 None:intergenic
ATTCTTTGAGCCTGCTATTT+GGG 0.298881 7.3:-27104637 MS.gene033496:CDS
GTTCAATACATGCCAACTAT+TGG 0.332078 7.3:-27104825 MS.gene033496:CDS
ATATAATCAACCCCAGAATC+TGG 0.336512 7.3:+27107479 None:intergenic
CGAGTAAAGTCGCAGCTAAA+AGG 0.336637 7.3:-27107682 MS.gene033496:intron
CATCTGGTGAAGATTCTCTT+AGG 0.351543 7.3:-27107532 MS.gene033496:CDS
GCTGCGACTTTACTCGGTTT+AGG 0.384760 7.3:+27107689 None:intergenic
TTCAAATTCGCCACCGCCTA+TGG 0.388934 7.3:-27108738 MS.gene033496:intron
GGAAGCTTGGATATCATATC+AGG 0.398701 7.3:-27105005 MS.gene033496:intron
AAAGACACCTGCCCCAGGTC+AGG 0.404524 7.3:-27106256 MS.gene033496:CDS
TTACCGTTGGATTTAACATC+TGG 0.405215 7.3:-27107548 MS.gene033496:CDS
ACTGGTGCCAGTCGTGGAAT+TGG 0.416369 7.3:-27108482 MS.gene033496:intron
GAGTTATTTGCTGTTTCTAT+GGG 0.430931 7.3:+27106041 None:intergenic
ATTTGCTGTTTCTATGGGAC+CGG 0.436779 7.3:+27106046 None:intergenic
CAACCCCAGAATCTGGGAAA+AGG 0.437165 7.3:+27107486 None:intergenic
CCTTGCAGATAGTATTAACT+TGG 0.441463 7.3:+27107723 None:intergenic
CTCATGGCTTAAAGGAAGCT+TGG 0.442157 7.3:-27105018 MS.gene033496:CDS
TAAATCCAACGGTAAAATCT+TGG 0.446034 7.3:+27107556 None:intergenic
CTTCAAAATATGCACTAAAT+GGG 0.451304 7.3:-27106221 MS.gene033496:CDS
TCCTCAACATGAAAGGTGTC+AGG 0.479332 7.3:+27106695 None:intergenic
AACCCCAGAATCTGGGAAAA+GGG 0.484607 7.3:+27107487 None:intergenic
TGTTATACCAATTCCACGAC+TGG 0.486639 7.3:+27108475 None:intergenic
ACGATTATTGCCGCAACTCA+TGG 0.488010 7.3:-27105034 MS.gene033496:CDS
ACATGAACTAATTGAAGATA+AGG 0.492696 7.3:-27108602 MS.gene033496:intron
TTGGGACAATAACTCTTACA+AGG 0.493035 7.3:-27106720 MS.gene033496:CDS
GCTCTGTCAGAAAGGAATCC+AGG 0.495667 7.3:-27106084 MS.gene033496:CDS
CGGGACAGACAACAGTTACC+TGG 0.497237 7.3:+27106066 None:intergenic
TCCTGACACCTTTCATGTTG+AGG 0.504874 7.3:-27106696 MS.gene033496:CDS
CAGGTAACTGTTGTCTGTCC+CGG 0.507865 7.3:-27106065 MS.gene033496:CDS
AGCAAATAACTCTGGATCGC+AGG 0.509219 7.3:-27106030 MS.gene033496:CDS
ATAGAAACAGCAAATAACTC+TGG 0.517811 7.3:-27106038 MS.gene033496:CDS
TGACACCTTTCATGTTGAGG+AGG 0.522261 7.3:-27106693 MS.gene033496:CDS
CTTCCATTCCTTGCGTTCAG+AGG 0.522843 7.3:-27106196 MS.gene033496:intron
TATAATCAACCCCAGAATCT+GGG 0.524930 7.3:+27107480 None:intergenic
GCTGAGTATACAGCCTGACC+TGG 0.530220 7.3:+27106243 None:intergenic
TTCCTTTAAGCCATGAGTTG+CGG 0.535357 7.3:+27105024 None:intergenic
TGGATTACTGGTGCCAGTCG+TGG 0.536159 7.3:-27108488 MS.gene033496:CDS
TGGTTGCAGCTCTGTCAGAA+AGG 0.538033 7.3:-27106092 MS.gene033496:intron
GCAAAGGTGCATACCTCAGA+TGG 0.538341 7.3:+27106005 None:intergenic
TGAATAAGAAGAGTAACAAG+AGG 0.547619 7.3:+27108757 None:intergenic
GACACCTTTCATGTTGAGGA+GGG 0.548237 7.3:-27106692 MS.gene033496:CDS
TATCAGATGAGTAGTGCAGC+AGG 0.548313 7.3:-27106279 MS.gene033496:intron
TATACAGCCTGACCTGGGGC+AGG 0.551365 7.3:+27106249 None:intergenic
CTGAGTATACAGCCTGACCT+GGG 0.554815 7.3:+27106244 None:intergenic
TTCATGTTGAGGAGGGGCAA+AGG 0.555421 7.3:-27106685 MS.gene033496:CDS
TGGTGAAGATTCTCTTAGGA+AGG 0.556573 7.3:-27107528 MS.gene033496:CDS
GCAGGAAAGACACCTGCCCC+AGG 0.558382 7.3:-27106261 MS.gene033496:CDS
TTGCCCCTCCTCAACATGAA+AGG 0.565586 7.3:+27106688 None:intergenic
ATACCTCTGAACGCAAGGAA+TGG 0.573698 7.3:+27106193 None:intergenic
CCAAGTTAATACTATCTGCA+AGG 0.576659 7.3:-27107723 MS.gene033496:CDS
AGTGGAGGCTGCTAAAGAGA+AGG 0.582662 7.3:-27104669 MS.gene033496:CDS
TGAGAAAATACCATAGGCGG+TGG 0.588552 7.3:+27108728 None:intergenic
TTTGCTGTTTCTATGGGACC+GGG 0.597122 7.3:+27106047 None:intergenic
ACTTTATACCTCTGAACGCA+AGG 0.597450 7.3:+27106188 None:intergenic
ACACCTTTCATGTTGAGGAG+GGG 0.599857 7.3:-27106691 MS.gene033496:CDS
CAAGTTAATACTATCTGCAA+GGG 0.605596 7.3:-27107722 MS.gene033496:CDS
TGGATCGCAGGTTCCATCTG+AGG 0.608655 7.3:-27106018 MS.gene033496:intron
AGATACATGACAGCAAGCAC+AGG 0.608883 7.3:+27104849 None:intergenic
TCACCAGATGTTAAATCCAA+CGG 0.609295 7.3:+27107545 None:intergenic
GTGGAGGCTGCTAAAGAGAA+GGG 0.610191 7.3:-27104668 MS.gene033496:CDS
TTGACAGAAGCGTGTGTCAG+CGG 0.614113 7.3:-27105074 MS.gene033496:intron
TCAACAACTTGCAAGTTTAG+GGG 0.622807 7.3:-27107746 MS.gene033496:CDS
GTAACAAGAGGAAGATACAG+AGG 0.625818 7.3:+27108769 None:intergenic
ACCAGGTAAGCATGCTGACG+AGG 0.633784 7.3:-27107579 MS.gene033496:intron
AAATACCTTGAGACTCTCCT+CGG 0.639284 7.3:+27106900 None:intergenic
CTCCTCGGTTACATCTAAGA+CGG 0.647183 7.3:+27106915 None:intergenic
GAGTGAGAAAATACCATAGG+CGG 0.656174 7.3:+27108725 None:intergenic
TGTAACCGAGGAGAGTCTCA+AGG 0.656987 7.3:-27106905 MS.gene033496:intron
TGAGTATACAGCCTGACCTG+GGG 0.691014 7.3:+27106245 None:intergenic
ATCCGTCTTAGATGTAACCG+AGG 0.697923 7.3:-27106917 MS.gene033496:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATACATTTATAAAC+AGG + chr7.3:27107092-27107111 None:intergenic 10.0%
!!! ATTATTTTAAACTATGAATA+TGG - chr7.3:27107758-27107777 MS.gene033496:CDS 10.0%
!!! TCTTTATTTTAACAATTTTT+TGG - chr7.3:27104716-27104735 MS.gene033496:intron 10.0%
!! ATGAAATATAAATAATCCTA+TGG + chr7.3:27104990-27105009 None:intergenic 15.0%
!! CAAATATTACTAAACTAATA+AGG + chr7.3:27108497-27108516 None:intergenic 15.0%
!! CAATAAAACATATTAGTTAT+TGG + chr7.3:27107026-27107045 None:intergenic 15.0%
!! GTAATACCTATTATAAAAAA+CGG + chr7.3:27108054-27108073 None:intergenic 15.0%
!! TAAGAATGGTTTAAATTAAA+TGG + chr7.3:27107942-27107961 None:intergenic 15.0%
!!! ATTTTTTCTTTTGAAATAGT+AGG - chr7.3:27107722-27107741 MS.gene033496:CDS 15.0%
!!! TTTCCTTTTATTTGATTTTA+GGG - chr7.3:27105491-27105510 MS.gene033496:intron 15.0%
!!! TTTTCCTTTTATTTGATTTT+AGG - chr7.3:27105490-27105509 MS.gene033496:intron 15.0%
!! AAAACATGTAAACATAAACT+TGG + chr7.3:27107632-27107651 None:intergenic 20.0%
!! AATGACTTTATATAAATGAC+TGG - chr7.3:27108697-27108716 MS.gene033496:intron 20.0%
!! ATACATTTATAAACAGGAAA+TGG + chr7.3:27107086-27107105 None:intergenic 20.0%
!! CTAGTAAGTGATATAATTTA+GGG - chr7.3:27105198-27105217 MS.gene033496:intron 20.0%
!! TACAAATAATGAAAAGATTC+TGG + chr7.3:27105564-27105583 None:intergenic 20.0%
!! TACATTTATAAACAGGAAAT+GGG + chr7.3:27107085-27107104 None:intergenic 20.0%
!! TAGAAAATACATCATTATTG+TGG - chr7.3:27106829-27106848 MS.gene033496:intron 20.0%
!! TCAGGTAAAAAAATTGTATT+AGG - chr7.3:27108419-27108438 MS.gene033496:intron 20.0%
!!! AAATAGCCGTTTTTTATAAT+AGG - chr7.3:27108045-27108064 MS.gene033496:intron 20.0%
!!! ACTGTTTTGATCAATTTATT+AGG - chr7.3:27104748-27104767 MS.gene033496:intron 20.0%
!!! ATAATCTCTTATTTTGGTTA+TGG - chr7.3:27106776-27106795 MS.gene033496:intron 20.0%
!!! GTCAAGACATAATTTTAAAA+GGG + chr7.3:27108317-27108336 None:intergenic 20.0%
!!! TCTTTGATAATCTCTTATTT+TGG - chr7.3:27106770-27106789 MS.gene033496:intron 20.0%
!!! TGTCAAGACATAATTTTAAA+AGG + chr7.3:27108318-27108337 None:intergenic 20.0%
!!! TTTTGAAAGAAAACTAAAAG+CGG + chr7.3:27106593-27106612 None:intergenic 20.0%
! AACTACACTATATACTTGAA+CGG - chr7.3:27106916-27106935 MS.gene033496:CDS 25.0%
! AAGCCCTAAAATCAAATAAA+AGG + chr7.3:27105497-27105516 None:intergenic 25.0%
! AAGTTTATACTGTAAATTCC+AGG + chr7.3:27108195-27108214 None:intergenic 25.0%
! AATTTGATCAAAAACACTTG+TGG + chr7.3:27105426-27105445 None:intergenic 25.0%
! ACATGAACTAATTGAAGATA+AGG - chr7.3:27104804-27104823 MS.gene033496:intron 25.0%
! ACATGTAGTATACATAAACT+TGG + chr7.3:27107567-27107586 None:intergenic 25.0%
! ACATTTATAAACAGGAAATG+GGG + chr7.3:27107084-27107103 None:intergenic 25.0%
! ACTTTATATAAATGACTGGT+AGG - chr7.3:27108701-27108720 MS.gene033496:intron 25.0%
! AGAACTTGATCATTTCATTA+TGG + chr7.3:27104865-27104884 None:intergenic 25.0%
! ATATGATCTACACTTCTTAT+CGG - chr7.3:27108000-27108019 MS.gene033496:intron 25.0%
! ATCAATGAATGTATATGAAG+GGG - chr7.3:27105627-27105646 MS.gene033496:intron 25.0%
! ATTACCAGAAAAATAAAGCA+GGG + chr7.3:27105393-27105412 None:intergenic 25.0%
! ATTCAATTTGATTAACCCTT+AGG - chr7.3:27105365-27105384 MS.gene033496:intron 25.0%
! ATTTGATCAAAAACACTTGT+GGG + chr7.3:27105425-27105444 None:intergenic 25.0%
! CATCAATGAATGTATATGAA+GGG - chr7.3:27105626-27105645 MS.gene033496:intron 25.0%
! CCTAAATTATATCACTTACT+AGG + chr7.3:27105200-27105219 None:intergenic 25.0%
! CCTAGTAAGTGATATAATTT+AGG - chr7.3:27105197-27105216 MS.gene033496:intron 25.0%
! CTTCAAAATATGCACTAAAT+GGG - chr7.3:27107185-27107204 MS.gene033496:intron 25.0%
! GACATAATGCATATAAAAGA+TGG + chr7.3:27108636-27108655 None:intergenic 25.0%
! GTAATATTTGTTCACTCAAT+CGG - chr7.3:27108507-27108526 MS.gene033496:intron 25.0%
! TATGAAAGTGATTTCATTGT+GGG + chr7.3:27105030-27105049 None:intergenic 25.0%
! TATTTGTTTCATTTCTTTCC+AGG - chr7.3:27104890-27104909 MS.gene033496:intron 25.0%
! TCACAGATATAAATGAGTAA+CGG + chr7.3:27105760-27105779 None:intergenic 25.0%
! TCATATACATTCATTGATGA+GGG + chr7.3:27105625-27105644 None:intergenic 25.0%
! TCATCAATGAATGTATATGA+AGG - chr7.3:27105625-27105644 MS.gene033496:intron 25.0%
! TCATCATCCTTATATCATTA+TGG + chr7.3:27106348-27106367 None:intergenic 25.0%
! TGATCATTTCATTATGGTAT+TGG + chr7.3:27104859-27104878 None:intergenic 25.0%
! TGCAACCATAAAAAAATTAG+CGG + chr7.3:27107302-27107321 None:intergenic 25.0%
! TTATGAAAGTGATTTCATTG+TGG + chr7.3:27105031-27105050 None:intergenic 25.0%
! TTCATATACATTCATTGATG+AGG + chr7.3:27105626-27105645 None:intergenic 25.0%
! TTTATATCTGTGAACAGATA+TGG - chr7.3:27105767-27105786 MS.gene033496:intron 25.0%
! TTTCACACTTATATTTCCAT+AGG - chr7.3:27104971-27104990 MS.gene033496:intron 25.0%
! TTTGAAAGAAAACTAAAAGC+GGG + chr7.3:27106592-27106611 None:intergenic 25.0%
!! AAATCACACATTAATGGATA+AGG + chr7.3:27105800-27105819 None:intergenic 25.0%
!! ACATTTGATGTCAATGTTTT+TGG - chr7.3:27106667-27106686 MS.gene033496:intron 25.0%
!! CATTTGATGTCAATGTTTTT+GGG - chr7.3:27106668-27106687 MS.gene033496:intron 25.0%
!! TCTTCAATTAGTTCATGTTT+TGG + chr7.3:27104802-27104821 None:intergenic 25.0%
!! TGTCATTTGTTTATATCTGT+AGG - chr7.3:27106148-27106167 MS.gene033496:intron 25.0%
!! TTTTCCAATAGAAAAACTCT+GGG + chr7.3:27107974-27107993 None:intergenic 25.0%
!!! AATTTTGCCTCTAAAATTGT+AGG + chr7.3:27105337-27105356 None:intergenic 25.0%
!!! ATGTATACTACATGTTTTGA+AGG - chr7.3:27107572-27107591 MS.gene033496:CDS 25.0%
!!! ATTTTGCCTCTAAAATTGTA+GGG + chr7.3:27105336-27105355 None:intergenic 25.0%
!!! TACAATTTTAGAGGCAAAAT+TGG - chr7.3:27105336-27105355 MS.gene033496:intron 25.0%
AAAATAGTAGATTCCGAAAC+TGG + chr7.3:27105471-27105490 None:intergenic 30.0%
ACAAACAAGCTAGAACATAA+AGG + chr7.3:27108220-27108239 None:intergenic 30.0%
ACACATAGTATCTCAAAAAG+AGG + chr7.3:27106121-27106140 None:intergenic 30.0%
ACTAGATGAAAGTTATCAGA+AGG - chr7.3:27105237-27105256 MS.gene033496:intron 30.0%
ACTCTTTACAAGTTAACAGA+AGG + chr7.3:27105140-27105159 None:intergenic 30.0%
AGTTAATGAAGATACTTGCA+TGG + chr7.3:27107501-27107520 None:intergenic 30.0%
ATAGAAACAGCAAATAACTC+TGG - chr7.3:27107368-27107387 MS.gene033496:intron 30.0%
ATTCCGAAACTGGAATTAAA+TGG + chr7.3:27105461-27105480 None:intergenic 30.0%
CAAACAAGCTAGAACATAAA+GGG + chr7.3:27108219-27108238 None:intergenic 30.0%
CAAGTTAATACTATCTGCAA+GGG - chr7.3:27105684-27105703 MS.gene033496:intron 30.0%
CATTACCAGAAAAATAAAGC+AGG + chr7.3:27105394-27105413 None:intergenic 30.0%
CCTATAAACGTAAAACAAGA+GGG - chr7.3:27106075-27106094 MS.gene033496:CDS 30.0%
CGTAGCAAAATTATGTTATG+TGG - chr7.3:27106805-27106824 MS.gene033496:intron 30.0%
CTAGATGAAAGTTATCAGAA+GGG - chr7.3:27105238-27105257 MS.gene033496:intron 30.0%
CTATAAACGTAAAACAAGAG+GGG - chr7.3:27106076-27106095 MS.gene033496:CDS 30.0%
CTGATATAACAAGCATATGT+AGG + chr7.3:27106047-27106066 None:intergenic 30.0%
GCTTCAAAATATGCACTAAA+TGG - chr7.3:27107184-27107203 MS.gene033496:intron 30.0%
GTATGCAAATCACACATTAA+TGG + chr7.3:27105806-27105825 None:intergenic 30.0%
GTCTTTCTTTACACTAACAA+TGG + chr7.3:27107438-27107457 None:intergenic 30.0%
TAAATCCAACGGTAAAATCT+TGG + chr7.3:27105853-27105872 None:intergenic 30.0%
TATAAACGTAAAACAAGAGG+GGG - chr7.3:27106077-27106096 MS.gene033496:CDS 30.0%
TATATAAATGACTGGTAGGT+TGG - chr7.3:27108705-27108724 MS.gene033496:intron 30.0%
TATTTCATGAATGTGACTCT+TGG - chr7.3:27106524-27106543 MS.gene033496:intron 30.0%
TGAACATATCAGAATTTGCA+TGG - chr7.3:27106012-27106031 MS.gene033496:intron 30.0%
TGAATAAGAAGAGTAACAAG+AGG + chr7.3:27104652-27104671 None:intergenic 30.0%
TGGTTGATTGCTTTATCTAA+TGG - chr7.3:27105983-27106002 MS.gene033496:intron 30.0%
TTAAACCATTCTTAATGCTC+TGG - chr7.3:27107948-27107967 MS.gene033496:intron 30.0%
TTACACGCCATAATGATATA+AGG - chr7.3:27106338-27106357 MS.gene033496:intron 30.0%
TTGAAAGAAAACTAAAAGCG+GGG + chr7.3:27106591-27106610 None:intergenic 30.0%
! AAAAGTCTTTTTCCACTTTG+TGG - chr7.3:27107853-27107872 MS.gene033496:intron 30.0%
! AAGAAGTGTAGATCATATGA+AGG + chr7.3:27107998-27108017 None:intergenic 30.0%
! AGAAGTGTAGATCATATGAA+GGG + chr7.3:27107997-27108016 None:intergenic 30.0%
! ATAAGGATGATGATTTGTGA+GGG - chr7.3:27106355-27106374 MS.gene033496:intron 30.0%
! ATGCCATTTAATTCCAGTTT+CGG - chr7.3:27105455-27105474 MS.gene033496:intron 30.0%
! GTTTTCCAATAGAAAAACTC+TGG + chr7.3:27107975-27107994 None:intergenic 30.0%
! TAACTTCAGACACATTTTGA+TGG - chr7.3:27106220-27106239 MS.gene033496:CDS 30.0%
! TATAAGGATGATGATTTGTG+AGG - chr7.3:27106354-27106373 MS.gene033496:intron 30.0%
! TTTGAAATAGTAGGTATGCA+CGG - chr7.3:27107731-27107750 MS.gene033496:CDS 30.0%
!! AACTTCAGACACATTTTGAT+GGG - chr7.3:27106221-27106240 MS.gene033496:CDS 30.0%
!! AGAGTTATTTGCTGTTTCTA+TGG + chr7.3:27107369-27107388 None:intergenic 30.0%
!! GAGTTATTTGCTGTTTCTAT+GGG + chr7.3:27107368-27107387 None:intergenic 30.0%
!!! ATGCACCGCTAATTTTTTTA+TGG - chr7.3:27107294-27107313 MS.gene033496:intron 30.0%
!!! GGGAACATTTTTTAAAGCTT+TGG + chr7.3:27106566-27106585 None:intergenic 30.0%
!!! TCATTTCTTTCCAGGTTTTT+TGG - chr7.3:27104898-27104917 MS.gene033496:intron 30.0%
!!! TTTTGCCTCTAAAATTGTAG+GGG + chr7.3:27105335-27105354 None:intergenic 30.0%
AAAAACGGCTATTTACAGTG+TGG + chr7.3:27108039-27108058 None:intergenic 35.0%
AAAATAAAGCAGGGAACCTA+AGG + chr7.3:27105384-27105403 None:intergenic 35.0%
AAATAAAGCAGGGAACCTAA+GGG + chr7.3:27105383-27105402 None:intergenic 35.0%
AAGGCACAAAAGTTGAAAAC+TGG + chr7.3:27108478-27108497 None:intergenic 35.0%
ACATCAAATGTTGCCTAATC+AGG + chr7.3:27106658-27106677 None:intergenic 35.0%
ACTAACAATGGATGCTTAGT+TGG + chr7.3:27107426-27107445 None:intergenic 35.0%
AGGGAAAGAACAAACTTCAA+TGG + chr7.3:27108298-27108317 None:intergenic 35.0%
AGTGAGTGAGAAAATACCAT+AGG + chr7.3:27104687-27104706 None:intergenic 35.0%
ATATAATCAACCCCAGAATC+TGG + chr7.3:27105930-27105949 None:intergenic 35.0%
ATGAGCCAAAAACCAATAGT+TGG + chr7.3:27108596-27108615 None:intergenic 35.0%
CATTGGTAGAGGATAGTTTA+AGG + chr7.3:27105527-27105546 None:intergenic 35.0%
CCAAGTTAATACTATCTGCA+AGG - chr7.3:27105683-27105702 MS.gene033496:intron 35.0%
CCTTGCAGATAGTATTAACT+TGG + chr7.3:27105686-27105705 None:intergenic 35.0%
CTCAACAACTTGCAAGTTTA+GGG - chr7.3:27105659-27105678 MS.gene033496:intron 35.0%
GAAACTGGAATTAAATGGCA+TGG + chr7.3:27105456-27105475 None:intergenic 35.0%
GAACACTAGAATCAAGAAAG+TGG - chr7.3:27106297-27106316 MS.gene033496:intron 35.0%
GCCTATAAACGTAAAACAAG+AGG - chr7.3:27106074-27106093 MS.gene033496:CDS 35.0%
GTTCAATACATGCCAACTAT+TGG - chr7.3:27108581-27108600 MS.gene033496:intron 35.0%
TAAAGCAATCAACCACTTAC+AGG + chr7.3:27105978-27105997 None:intergenic 35.0%
TAATGAAGATACTTGCATGG+TGG + chr7.3:27107498-27107517 None:intergenic 35.0%
TATAATCAACCCCAGAATCT+GGG + chr7.3:27105929-27105948 None:intergenic 35.0%
TATTCTTTGAGCCTGCTATT+TGG - chr7.3:27108768-27108787 MS.gene033496:CDS 35.0%
TCAACAACTTGCAAGTTTAG+GGG - chr7.3:27105660-27105679 MS.gene033496:intron 35.0%
TCACCAGATGTTAAATCCAA+CGG + chr7.3:27105864-27105883 None:intergenic 35.0%
TCTTGATTTAGCAATCTCAG+TGG + chr7.3:27107530-27107549 None:intergenic 35.0%
TGCAAAGAAATCATTGGTAG+AGG + chr7.3:27105538-27105557 None:intergenic 35.0%
TTACCGTTGGATTTAACATC+TGG - chr7.3:27105858-27105877 MS.gene033496:intron 35.0%
TTCAAGACAGAAGACAAGAT+AGG + chr7.3:27108109-27108128 None:intergenic 35.0%
TTGAAATAGTAGGTATGCAC+GGG - chr7.3:27107732-27107751 MS.gene033496:CDS 35.0%
TTGGGACAATAACTCTTACA+AGG - chr7.3:27106686-27106705 MS.gene033496:CDS 35.0%
TTGTCTCTTCGCAAATTTCA+GGG - chr7.3:27105296-27105315 MS.gene033496:intron 35.0%
TTGTCTTCTGTCTTGAAACA+TGG - chr7.3:27108112-27108131 MS.gene033496:intron 35.0%
TTTGAATACGTCTGACAACT+TGG - chr7.3:27105113-27105132 MS.gene033496:intron 35.0%
TTTGTCTCTTCGCAAATTTC+AGG - chr7.3:27105295-27105314 MS.gene033496:intron 35.0%
! ATTCTTTGAGCCTGCTATTT+GGG - chr7.3:27108769-27108788 MS.gene033496:CDS 35.0%
! TGGCTTTGCAAAGAAATCAT+TGG + chr7.3:27105544-27105563 None:intergenic 35.0%
! TTACTCCTTTTCTCCTGATT+AGG - chr7.3:27106642-27106661 MS.gene033496:intron 35.0%
! TTTTTCCACTTTGTGGATTC+AGG - chr7.3:27107860-27107879 MS.gene033496:intron 35.0%
!!! AACTATTGGTTTTTGGCTCA+TGG - chr7.3:27108595-27108614 MS.gene033496:intron 35.0%
!!! ACATGCCAACTATTGGTTTT+TGG - chr7.3:27108588-27108607 MS.gene033496:intron 35.0%
!!! CCCTCTTGTTTTACGTTTAT+AGG + chr7.3:27106078-27106097 None:intergenic 35.0%
!!! TTCCAGGTTTTTTGGATTAC+TGG - chr7.3:27104906-27104925 MS.gene033496:intron 35.0%
AAAGAAAACTAAAAGCGGGG+AGG + chr7.3:27106588-27106607 None:intergenic 40.0%
AAATACCTTGAGACTCTCCT+CGG + chr7.3:27106509-27106528 None:intergenic 40.0%
AAGAAAACTAAAAGCGGGGA+GGG + chr7.3:27106587-27106606 None:intergenic 40.0%
AATGGATGCTTAGTTGGCAA+AGG + chr7.3:27107420-27107439 None:intergenic 40.0%
ACTTTATACCTCTGAACGCA+AGG + chr7.3:27107221-27107240 None:intergenic 40.0%
CACCAGTAATCCAAAAAACC+TGG + chr7.3:27104911-27104930 None:intergenic 40.0%
CATCTGGTGAAGATTCTCTT+AGG - chr7.3:27105874-27105893 MS.gene033496:intron 40.0%
GAGTGAGAAAATACCATAGG+CGG + chr7.3:27104684-27104703 None:intergenic 40.0%
GCTCAACAACTTGCAAGTTT+AGG - chr7.3:27105658-27105677 MS.gene033496:intron 40.0%
GGAAGCTTGGATATCATATC+AGG - chr7.3:27108401-27108420 MS.gene033496:intron 40.0%
GTAACAAGAGGAAGATACAG+AGG + chr7.3:27104640-27104659 None:intergenic 40.0%
TGGTGAAGATTCTCTTAGGA+AGG - chr7.3:27105878-27105897 MS.gene033496:intron 40.0%
TGTCTCTTCGCAAATTTCAG+GGG - chr7.3:27105297-27105316 MS.gene033496:intron 40.0%
TGTTATACCAATTCCACGAC+TGG + chr7.3:27104934-27104953 None:intergenic 40.0%
TGTTGCCTAATCAGGAGAAA+AGG + chr7.3:27106650-27106669 None:intergenic 40.0%
TTCCTTTAAGCCATGAGTTG+CGG + chr7.3:27108385-27108404 None:intergenic 40.0%
TTGAATTACGTCGAGCAACT+TGG + chr7.3:27105264-27105283 None:intergenic 40.0%
! AATCCCTTTTCCCAGATTCT+GGG - chr7.3:27105916-27105935 MS.gene033496:intron 40.0%
! CCTGCTATTTGGGAAAAAGA+AGG - chr7.3:27108779-27108798 MS.gene033496:CDS 40.0%
! CCTTCTTTTTCCCAAATAGC+AGG + chr7.3:27108782-27108801 None:intergenic 40.0%
!! ATTTGCTGTTTCTATGGGAC+CGG + chr7.3:27107363-27107382 None:intergenic 40.0%
!! CTTTTAGCTGCGACTTTACT+CGG + chr7.3:27105726-27105745 None:intergenic 40.0%
!! GTAGGTTGGTAAAAATCGAG+TGG - chr7.3:27108719-27108738 MS.gene033496:intron 40.0%
!! GTCATTTTGTGGTGGTATGT+GGG - chr7.3:27106743-27106762 MS.gene033496:CDS 40.0%
!!! GGTTCCCTGCTTTATTTTTC+TGG - chr7.3:27105386-27105405 MS.gene033496:intron 40.0%
AAATTTCAGGGGGTAAGTGC+TGG - chr7.3:27105308-27105327 MS.gene033496:intron 45.0%
AACCCCAGAATCTGGGAAAA+GGG + chr7.3:27105922-27105941 None:intergenic 45.0%
ACACCTTTCATGTTGAGGAG+GGG - chr7.3:27106715-27106734 MS.gene033496:CDS 45.0%
ACGATTATTGCCGCAACTCA+TGG - chr7.3:27108372-27108391 MS.gene033496:intron 45.0%
AGAAAACTAAAAGCGGGGAG+GGG + chr7.3:27106586-27106605 None:intergenic 45.0%
AGATACATGACAGCAAGCAC+AGG + chr7.3:27108560-27108579 None:intergenic 45.0%
AGCAAATAACTCTGGATCGC+AGG - chr7.3:27107376-27107395 MS.gene033496:intron 45.0%
ATACCTCTGAACGCAAGGAA+TGG + chr7.3:27107216-27107235 None:intergenic 45.0%
ATCCGTCTTAGATGTAACCG+AGG - chr7.3:27106489-27106508 MS.gene033496:intron 45.0%
CGAGTAAAGTCGCAGCTAAA+AGG - chr7.3:27105724-27105743 MS.gene033496:intron 45.0%
CTCATGGCTTAAAGGAAGCT+TGG - chr7.3:27108388-27108407 MS.gene033496:intron 45.0%
CTCCTCGGTTACATCTAAGA+CGG + chr7.3:27106494-27106513 None:intergenic 45.0%
CTTAGCATAGCCAGAAGCTA+TGG + chr7.3:27107003-27107022 None:intergenic 45.0%
GACACCTTTCATGTTGAGGA+GGG - chr7.3:27106714-27106733 MS.gene033496:CDS 45.0%
GCAAGATGTTTGTGACTGCA+AGG - chr7.3:27106860-27106879 MS.gene033496:intron 45.0%
GTCTCTTCGCAAATTTCAGG+GGG - chr7.3:27105298-27105317 MS.gene033496:intron 45.0%
TATCAGATGAGTAGTGCAGC+AGG - chr7.3:27107127-27107146 MS.gene033496:intron 45.0%
TCCTGACACCTTTCATGTTG+AGG - chr7.3:27106710-27106729 MS.gene033496:CDS 45.0%
TGACACCTTTCATGTTGAGG+AGG - chr7.3:27106713-27106732 MS.gene033496:CDS 45.0%
TGAGAAAATACCATAGGCGG+TGG + chr7.3:27104681-27104700 None:intergenic 45.0%
! ATCCCTTTTCCCAGATTCTG+GGG - chr7.3:27105917-27105936 MS.gene033496:intron 45.0%
! ATTGAAGAGAAGCGCAAGCA+AGG - chr7.3:27108162-27108181 MS.gene033496:intron 45.0%
! CTGGACCCCTACAATTTTAG+AGG - chr7.3:27105327-27105346 MS.gene033496:intron 45.0%
! CTGGCCCAGAGTTTTTCTAT+TGG - chr7.3:27107967-27107986 MS.gene033496:intron 45.0%
! GAATCCCTTTTCCCAGATTC+TGG - chr7.3:27105915-27105934 MS.gene033496:intron 45.0%
! TGTGTGATTTGCATACCACC+AGG - chr7.3:27105810-27105829 MS.gene033496:intron 45.0%
!! GGTCATTTTGTGGTGGTATG+TGG - chr7.3:27106742-27106761 MS.gene033496:CDS 45.0%
!! GGTTGGTAAAAATCGAGTGG+AGG - chr7.3:27108722-27108741 MS.gene033496:intron 45.0%
!! TCCTCAACATGAAAGGTGTC+AGG + chr7.3:27106714-27106733 None:intergenic 45.0%
!! TTTGCTGTTTCTATGGGACC+GGG + chr7.3:27107362-27107381 None:intergenic 45.0%
!!! TAATAATAATTTTAAATGTT+CGG - chr7.3:27106940-27106959 MS.gene033496:intron 5.0%
AGCAGCCTGAATCCACAAAG+TGG + chr7.3:27107868-27107887 None:intergenic 50.0%
AGTGGAGGCTGCTAAAGAGA+AGG - chr7.3:27108737-27108756 MS.gene033496:intron 50.0%
CAACCCCAGAATCTGGGAAA+AGG + chr7.3:27105923-27105942 None:intergenic 50.0%
CAGGTAACTGTTGTCTGTCC+CGG - chr7.3:27107341-27107360 MS.gene033496:intron 50.0%
CCACTTGAATGTGTGTCGTG+CGG - chr7.3:27108246-27108265 MS.gene033496:intron 50.0%
CTGAGTATACAGCCTGACCT+GGG + chr7.3:27107165-27107184 None:intergenic 50.0%
CTTCCATTCCTTGCGTTCAG+AGG - chr7.3:27107210-27107229 MS.gene033496:intron 50.0%
GCTCTGTCAGAAAGGAATCC+AGG - chr7.3:27107322-27107341 MS.gene033496:intron 50.0%
GCTGCGACTTTACTCGGTTT+AGG + chr7.3:27105720-27105739 None:intergenic 50.0%
GCTTATGAGCGTCCTGTAAG+TGG - chr7.3:27105963-27105982 MS.gene033496:intron 50.0%
GTCTTGTGTGCCATAGCTTC+TGG - chr7.3:27106990-27107009 MS.gene033496:intron 50.0%
GTGGAGGCTGCTAAAGAGAA+GGG - chr7.3:27108738-27108757 MS.gene033496:intron 50.0%
TGAGTATACAGCCTGACCTG+GGG + chr7.3:27107164-27107183 None:intergenic 50.0%
TGCCGCAACTCATGGCTTAA+AGG - chr7.3:27108380-27108399 MS.gene033496:intron 50.0%
TGGTTGCAGCTCTGTCAGAA+AGG - chr7.3:27107314-27107333 MS.gene033496:intron 50.0%
TGTAACCGAGGAGAGTCTCA+AGG - chr7.3:27106501-27106520 MS.gene033496:intron 50.0%
TTCAAATTCGCCACCGCCTA+TGG - chr7.3:27104668-27104687 MS.gene033496:CDS 50.0%
TTCATGTTGAGGAGGGGCAA+AGG - chr7.3:27106721-27106740 MS.gene033496:CDS 50.0%
TTGCCCCTCCTCAACATGAA+AGG + chr7.3:27106721-27106740 None:intergenic 50.0%
! CGAGGCCAAGATTTTACCGT+TGG - chr7.3:27105845-27105864 MS.gene033496:intron 50.0%
! CTGGGCCAGAGCATTAAGAA+TGG + chr7.3:27107956-27107975 None:intergenic 50.0%
! GCAAAGGTGCATACCTCAGA+TGG + chr7.3:27107404-27107423 None:intergenic 50.0%
! TTGACAGAAGCGTGTGTCAG+CGG - chr7.3:27108332-27108351 MS.gene033496:intron 50.0%
!! GAGGGGCAAAGGTCATTTTG+TGG - chr7.3:27106732-27106751 MS.gene033496:CDS 50.0%
!! GGGCAAAGGTCATTTTGTGG+TGG - chr7.3:27106735-27106754 MS.gene033496:CDS 50.0%
ACCAGGTAAGCATGCTGACG+AGG - chr7.3:27105827-27105846 MS.gene033496:intron 55.0%
CCGCACGACACACATTCAAG+TGG + chr7.3:27108249-27108268 None:intergenic 55.0%
CGCAAGCAAGGTCTTAGACC+TGG - chr7.3:27108174-27108193 MS.gene033496:intron 55.0%
CGGGACAGACAACAGTTACC+TGG + chr7.3:27107343-27107362 None:intergenic 55.0%
GCTGAGTATACAGCCTGACC+TGG + chr7.3:27107166-27107185 None:intergenic 55.0%
TCGTCAGCATGCTTACCTGG+TGG + chr7.3:27105828-27105847 None:intergenic 55.0%
TGGATCGCAGGTTCCATCTG+AGG - chr7.3:27107388-27107407 MS.gene033496:intron 55.0%
! ACTGGTGCCAGTCGTGGAAT+TGG - chr7.3:27104924-27104943 MS.gene033496:intron 55.0%
! TGATGGGTGTGCTTGCATGC+TGG - chr7.3:27106237-27106256 MS.gene033496:CDS 55.0%
! TGGATTACTGGTGCCAGTCG+TGG - chr7.3:27104918-27104937 MS.gene033496:intron 55.0%
AAAGACACCTGCCCCAGGTC+AGG - chr7.3:27107150-27107169 MS.gene033496:intron 60.0%
GCCTCGTCAGCATGCTTACC+TGG + chr7.3:27105831-27105850 None:intergenic 60.0%
TATACAGCCTGACCTGGGGC+AGG + chr7.3:27107160-27107179 None:intergenic 60.0%
GCAGGAAAGACACCTGCCCC+AGG - chr7.3:27107145-27107164 MS.gene033496:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27104623 27108805 27104623 ID=MS.gene033496
chr7.3 mRNA 27104623 27108805 27104623 ID=MS.gene033496.t1;Parent=MS.gene033496
chr7.3 exon 27108739 27108805 27108739 ID=MS.gene033496.t1.exon1;Parent=MS.gene033496.t1
chr7.3 CDS 27108739 27108805 27108739 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27108603 27108658 27108603 ID=MS.gene033496.t1.exon2;Parent=MS.gene033496.t1
chr7.3 CDS 27108603 27108658 27108603 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27108483 27108516 27108483 ID=MS.gene033496.t1.exon3;Parent=MS.gene033496.t1
chr7.3 CDS 27108483 27108516 27108483 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27107683 27107781 27107683 ID=MS.gene033496.t1.exon4;Parent=MS.gene033496.t1
chr7.3 CDS 27107683 27107781 27107683 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27107451 27107596 27107451 ID=MS.gene033496.t1.exon5;Parent=MS.gene033496.t1
chr7.3 CDS 27107451 27107596 27107451 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27106906 27106944 27106906 ID=MS.gene033496.t1.exon6;Parent=MS.gene033496.t1
chr7.3 CDS 27106906 27106944 27106906 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27106672 27106764 27106672 ID=MS.gene033496.t1.exon7;Parent=MS.gene033496.t1
chr7.3 CDS 27106672 27106764 27106672 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27106197 27106295 27106197 ID=MS.gene033496.t1.exon8;Parent=MS.gene033496.t1
chr7.3 CDS 27106197 27106295 27106197 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27106019 27106105 27106019 ID=MS.gene033496.t1.exon9;Parent=MS.gene033496.t1
chr7.3 CDS 27106019 27106105 27106019 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27105006 27105089 27105006 ID=MS.gene033496.t1.exon10;Parent=MS.gene033496.t1
chr7.3 CDS 27105006 27105089 27105006 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27104806 27104871 27104806 ID=MS.gene033496.t1.exon11;Parent=MS.gene033496.t1
chr7.3 CDS 27104806 27104871 27104806 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
chr7.3 exon 27104623 27104705 27104623 ID=MS.gene033496.t1.exon12;Parent=MS.gene033496.t1
chr7.3 CDS 27104623 27104705 27104623 ID=cds.MS.gene033496.t1;Parent=MS.gene033496.t1
Gene Sequence

>MS.gene033496

ATGTTGGTTCTGTTCCTCTGTATCTTCCTCTTGTTACTCTTCTTATTCAAATTCGCCACCGCCTATGGTATTTTCTCACTCACTTTTTTAATCTCTTTATTTTAACAATTTTTTGGATGCTTATTACTGTTTTGATCAATTTATTAGGTGATTTCACTTTGATGTCAAAGAAGAAACCAAAACATGAACTAATTGAAGATAAGGTTGAATTTCTCATGCTATTGCTATTGATACCAATACCATAATGAAATGATCAAGTTCTTATGTTATTTGTTTCATTTCTTTCCAGGTTTTTTGGATTACTGGTGCCAGTCGTGGAATTGGTATAACAATAACTATAACTATTCATTTCACACTTATATTTCCATAGGATTATTTATATTTCATAATTTAATTCAAATTCACCCACAATGAAATCACTTTCATAAGTCAATCAATCAAAGTAATTAACTTTCGATGAATTTAGTTAGAGACTAGTAAAGAACATGATTTTGAATACGTCTGACAACTTGGTCCTTCTGTTAACTTGTAAAGAGTAGTTTGACTATAAGTGATACAGTTCAAGAACTAATTTCCTAGTAAGTGATATAATTTAGGGACTAATTTGATAGTAAACTAGATGAAAGTTATCAGAAGGGCCAAGTTGCTCGACGTAATTCAAAATTAGTCTCTTTTGTCTCTTCGCAAATTTCAGGGGGTAAGTGCTGGACCCCTACAATTTTAGAGGCAAAATTGGTGATTTATTCAATTTGATTAACCCTTAGGTTCCCTGCTTTATTTTTCTGGTAATGATCATCTTCCCACAAGTGTTTTTGATCAAATTAATCATGCCATGCCATTTAATTCCAGTTTCGGAATCTACTATTTTTTTCCTTTTATTTGATTTTAGGGCTTTTTTTATCCTTAAACTATCCTCTACCAATGATTTCTTTGCAAAGCCAGAATCTTTTCATTATTTGTAGTTTTTTCGTGTGACTTATTTCTTTTGTTGTTTAATTACCCTCATCAATGAATGTATATGAAGGGGAAATTCTAGCTCAACAACTTGCAAGTTTAGGGGCCAAGTTAATACTATCTGCAAGGGATGAAGCTGACCTAAACCGAGTAAAGTCGCAGCTAAAAGGTACGATAAATCCGTTACTCATTTATATCTGTGAACAGATATGGACACTTGCCTTATCCATTAATGTGTGATTTGCATACCACCAGGTAAGCATGCTGACGAGGCCAAGATTTTACCGTTGGATTTAACATCTGGTGAAGATTCTCTTAGGAAGGTTGTCGATGAAGCAGAATCCCTTTTCCCAGATTCTGGGGTTGATTATATGATTCATAATGCTGCTTATGAGCGTCCTGTAAGTGGTTGATTGCTTTATCTAATGGTTATATTGAACATATCAGAATTTGCATGGAAAACAAAACCTACATATGCTTGTTATATCAGAAGACACGCCTATAAACGTAAAACAAGAGGGGGCAAATAGACTTACTGTGTCCTCTTTTTGAGATACTATGTGTGTGTGTGTGTCATTTGTTTATATCTGTAGGTTTATATATTTTTCTGTCAGTGTTTAGTTACAATTCTAAAATAGTGCAATAACTTCAGACACATTTTGATGGGTGTGCTTGCATGCTGGTGTATTTGTAGCATATTAGCAATTACATTTACTAATTGAACACTAGAATCAAGAAAGTGGCATGACATGCTTGCATATTTACACGCCATAATGATATAAGGATGATGATTTGTGAGGGTTGATGAAATTTCTCTTTAATAATAATGTTAACTAGTCTTTATTCTTTATGTTTTACATACTTCTTTAATTAAACATCTTATGAAAATAGTTATTTTGTTTTGCAGAAATCATCCGTCTTAGATGTAACCGAGGAGAGTCTCAAGGTATTTCATGAATGTGACTCTTGGTTTTGCTGATTAATTACCAAAGCTTTAAAAAATGTTCCCCTCCCCGCTTTTAGTTTTCTTTCAAAACATTGAAAGCTGTCTTCTGAAATTCTGCATTACTCCTTTTCTCCTGATTAGGCAACATTTGATGTCAATGTTTTTGGGACAATAACTCTTACAAGGCTCCTGACACCTTTCATGTTGAGGAGGGGCAAAGGTCATTTTGTGGTGGTATGTGGGTTATTCTTTGATAATCTCTTATTTTGGTTATGGAATCTGCGTAGCAAAATTATGTTATGTGGTTAGAAAATACATCATTATTGTGGAGCTTGCAGCAAGATGTTTGTGACTGCAAGGAAAAAGTATAGAGTAGTCACTTGTTAGCTTTTCAACTACACTATATACTTGAACGGATAATAATAATTTTAAATGTTCGGATATAATATATTTGTCACATGTTTTATGTCTTGTGTGCCATAGCTTCTGGCTATGCTAAGCCAATAACTAATATGTTTTATTGTCACATGTTCATTAGATATTTCTCTGAAGTTTTAACCCCATTTCCTGTTTATAAATGTATAATATTCTGTTCTATGTTTACTATCAGATGAGTAGTGCAGCAGGAAAGACACCTGCCCCAGGTCAGGCTGTATACTCAGCTTCAAAATATGCACTAAATGGGTACTTCCATTCCTTGCGTTCAGAGGTATAAAGTTAGTTTTATGTTTGATGTTGTTTTATTCTAATTATCATCATACAGTACATATCATGCACCGCTAATTTTTTTATGGTTGCAGCTCTGTCAGAAAGGAATCCAGGTAACTGTTGTCTGTCCCGGTCCCATAGAAACAGCAAATAACTCTGGATCGCAGGTTCCATCTGAGGTATGCACCTTTGCCAACTAAGCATCCATTGTTAGTGTAAAGAAAGACAGTACTTGAGTCTATCTGTTTTAACTCTACTTTATTTCCACCATGCAAGTATCTTCATTAACTTCTTATCCACTGAGATTGCTAAATCAAGATACACGACAATTTTCCAAGTTTATGTATACTACATGTTTTGAAGGTTGAGAGTGCTAAATCAATATACATCTCTGTTTTCCAAGTTTATGTTTACATGTTTTACAATAATGAAGATATTTGTTGTCATTGTATTTCTAAGTTTATGTTTACATGTGTATAGTTTTACTTCACATTTTTTCTTTTGAAATAGTAGGTATGCACGGGATTATTATTTTAAACTATGAATATGGCTTGCTAATCTAATATCATGTTTGCTAAATGAAAACAACTAAGAATATGCATATGCAAGTGCAACAATAACAAAAAGTCTTTTTCCACTTTGTGGATTCAGGCTGCTTGAATCAAACAATATCATAATGTCTTGTCGTAAATCATATTTATTGATAAACCATTTAATTTAAACCATTCTTAATGCTCTGGCCCAGAGTTTTTCTATTGGAAAACCCTTCATATGATCTACACTTCTTATCGGAACTTCTATAAGTCCACACTGTAAATAGCCGTTTTTTATAATAGGTATTACTCAACTTTCTCTTCACTGCAATCATTTGTAGTCCTATCTTGTCTTCTGTCTTGAAACATGGTCAACACTGAATAAAAATGAATTATAGATTGAAGAGAAGCGCAAGCAAGGTCTTAGACCTGGAATTTACAGTATAAACTTTCCCTTTATGTTCTAGCTTGTTTGTTAGCTTCCACTTGAATGTGTGTCGTGCGGTGTTTTTGCTGATTGCATCATCTGAACCATTGAAGTTTGTTCTTTCCCTTTTAAAATTATGTCTTGACAGAAGCGTGTGTCAGCGGAGAAGTGTGTTGAGCTGACGATTATTGCCGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAGGTAAAAAAATTGTATTAGGCTATTAGAAATCTATTTCTGTTAGAATACTGCACCAGTTTTCAACTTTTGTGCCTTATTAGTTTAGTAATATTTGTTCACTCAATCGGCAATACTGAACTCTTTTTCGTTTGCAGCCTGTGCTTGCTGTCATGTATCTTGTTCAATACATGCCAACTATTGGTTTTTGGCTCATGGACAAGGTATTGTTTTCCATCTTTTATATGCATTATGTCTGTCTTTATGAAGACATTTGATTTTTGTTACAATACTAATTAATGACTTTATATAAATGACTGGTAGGTTGGTAAAAATCGAGTGGAGGCTGCTAAAGAGAAGGGAAACGCATATTCTTTGAGCCTGCTATTTGGGAAAAAGAAGGCAGT
Protein sequence

>MS.gene033496.t1

MLVLFLCIFLLLLFLFKFATAYGDFTLMSKKKPKHELIEDKVFWITGASRGIGEILAQQLASLGAKLILSARDEADLNRVKSQLKGKHADEAKILPLDLTSGEDSLRKVVDEAESLFPDSGVDYMIHNAAYERPKSSVLDVTEESLKATFDVNVFGTITLTRLLTPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELCQKGIQVTVVCPGPIETANNSGSQVPSEKRVSAEKCVELTIIAATHGLKEAWISYQPVLAVMYLVQYMPTIGFWLMDKVGKNRVEAAKEKGNAYSLSLLFGKKKA