AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033498

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033498.t1 MTR_7g080410 99.371 318 2 0 1 318 1 318 0.0 649
MS.gene033498.t1 MTR_7g080410 92.767 318 1 1 1 318 1 296 0.0 589
MS.gene033498.t1 MTR_8g096620 34.513 226 136 8 36 257 43 260 3.72e-24 101
MS.gene033498.t1 MTR_7g063260 29.612 206 139 5 26 230 4 204 1.58e-20 89.7
MS.gene033498.t1 MTR_7g063360 29.327 208 135 3 26 229 4 203 1.84e-20 89.4
MS.gene033498.t1 MTR_7g063270 29.126 206 140 5 26 230 4 204 7.66e-20 87.8
MS.gene033498.t1 MTR_7g063390 29.412 204 140 4 26 229 4 203 2.41e-19 86.3
MS.gene033498.t1 MTR_3g086210 31.047 277 160 15 5 269 16 273 6.52e-19 85.9
MS.gene033498.t1 MTR_7g063330 29.630 189 121 4 45 229 22 202 9.44e-19 84.7
MS.gene033498.t1 MTR_8g089575 30.800 250 162 7 1 244 6 250 1.37e-18 85.1
MS.gene033498.t1 MTR_8g096580 32.308 195 126 5 36 229 43 232 1.65e-18 84.7
MS.gene033498.t1 MTR_7g063320 28.500 200 139 4 30 229 7 202 8.36e-18 82.0
MS.gene033498.t1 MTR_7g105590 32.292 192 121 4 38 227 8 192 1.82e-17 79.7
MS.gene033498.t1 MTR_2g022600 31.535 241 138 8 30 263 25 245 1.09e-16 80.1
MS.gene033498.t1 MTR_7g094520 27.184 206 143 4 28 229 1 203 1.13e-16 78.6
MS.gene033498.t1 MTR_4g058810 30.049 203 134 6 28 225 1 200 1.34e-15 75.9
MS.gene033498.t1 MTR_4g134660 29.592 196 128 5 38 229 6 195 1.46e-15 75.1
MS.gene033498.t1 MTR_3g087850 27.985 268 153 10 42 281 30 285 2.14e-15 75.9
MS.gene033498.t1 MTR_4g058840 30.808 198 130 5 32 225 6 200 2.16e-15 75.5
MS.gene033498.t1 MTR_4g058820 30.808 198 130 5 32 225 6 200 2.16e-15 75.5
MS.gene033498.t1 MTR_7g094510 27.835 194 137 3 38 229 6 198 5.67e-15 73.9
MS.gene033498.t1 MTR_4g064887 28.342 187 126 3 45 229 22 202 4.53e-14 70.9
MS.gene033498.t1 MTR_7g107670 29.897 194 126 5 38 229 33 218 6.13e-14 71.6
MS.gene033498.t1 MTR_4g064887 28.342 187 126 3 45 229 22 202 1.79e-13 69.7
MS.gene033498.t1 MTR_4g131740 26.293 232 151 5 26 241 29 256 2.93e-13 69.3
MS.gene033498.t1 MTR_3g085740 26.829 205 144 5 26 229 63 262 6.28e-13 68.6
MS.gene033498.t1 MTR_7g105580 30.928 194 107 5 38 229 8 176 4.29e-12 65.5
MS.gene033498.t1 MTR_4g132850 27.513 189 130 5 41 229 10 191 4.43e-12 65.5
MS.gene033498.t1 MTR_7g083870 26.804 194 133 4 38 229 35 221 4.54e-12 65.9
MS.gene033498.t1 MTR_3g087860 31.655 139 90 4 97 234 65 199 6.76e-12 65.5
MS.gene033498.t1 MTR_7g113650 28.571 210 126 8 32 229 35 232 7.93e-12 65.1
MS.gene033498.t1 MTR_3g068175 26.289 194 135 5 38 229 17 204 1.15e-11 64.7
MS.gene033498.t1 MTR_3g068065 27.322 183 123 5 45 224 24 199 1.30e-11 64.3
MS.gene033498.t1 MTR_7g071680 27.751 209 137 6 26 230 19 217 1.49e-11 64.7
MS.gene033498.t1 MTR_4g064883 26.882 186 132 2 45 230 21 202 2.15e-11 62.8
MS.gene033498.t1 MTR_5g008850 27.962 211 128 8 36 234 43 241 2.57e-11 64.3
MS.gene033498.t1 MTR_4g097510 26.425 193 131 6 39 229 3 186 3.37e-11 63.2
MS.gene033498.t1 MTR_1563s0010 31.651 218 128 10 41 246 112 320 6.58e-11 63.2
MS.gene033498.t1 MTR_3g113870 28.495 186 123 5 46 229 29 206 7.93e-11 61.6
MS.gene033498.t1 MTR_3g068085 25.556 180 130 3 45 224 22 197 8.29e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033498.t1 AT3G03330 71.569 306 81 2 16 315 19 324 4.19e-161 452
MS.gene033498.t1 AT3G03350 64.957 117 36 1 135 246 172 288 1.21e-47 162
MS.gene033498.t1 AT3G03350 64.957 117 36 1 135 246 258 374 1.30e-46 161
MS.gene033498.t1 AT3G47350 36.842 228 134 8 5 229 10 230 1.82e-25 103
MS.gene033498.t1 AT3G47350 36.842 228 134 8 5 229 10 230 2.71e-25 103
MS.gene033498.t1 AT3G47360 34.667 225 134 8 10 229 15 231 8.63e-24 99.4
MS.gene033498.t1 AT5G50600 34.300 207 127 6 36 240 43 242 2.09e-22 96.3
MS.gene033498.t1 AT5G50700 34.300 207 127 6 36 240 43 242 2.09e-22 96.3
MS.gene033498.t1 AT1G10310 31.122 196 127 3 35 229 12 200 3.75e-19 85.5
MS.gene033498.t1 AT5G50690 31.034 232 146 8 3 233 17 235 8.18e-19 84.7
MS.gene033498.t1 AT5G50590 31.034 232 146 8 3 233 17 235 8.18e-19 84.7
MS.gene033498.t1 AT5G50690 30.508 236 142 8 3 233 17 235 9.41e-19 85.1
MS.gene033498.t1 AT5G50590 30.508 236 142 8 3 233 17 235 9.41e-19 85.1
MS.gene033498.t1 AT5G10050 28.269 283 152 12 39 289 6 269 1.48e-17 81.6
MS.gene033498.t1 AT1G63380 30.732 205 134 5 26 225 6 207 4.09e-17 80.5
MS.gene033498.t1 AT4G10020 31.841 201 128 6 36 234 45 238 4.24e-17 81.6
MS.gene033498.t1 AT1G63380 29.130 230 140 6 1 225 1 212 4.81e-17 80.1
MS.gene033498.t1 AT3G46170 30.622 209 136 6 22 225 11 215 4.96e-17 80.1
MS.gene033498.t1 AT5G65205 30.303 198 126 6 39 234 7 194 5.64e-17 80.1
MS.gene033498.t1 AT2G29360 29.703 202 133 6 30 229 9 203 5.70e-17 79.7
MS.gene033498.t1 AT1G62610 30.244 205 133 6 27 225 3 203 5.81e-17 79.7
MS.gene033498.t1 AT3G55310 30.732 205 133 6 26 225 6 206 5.87e-17 79.7
MS.gene033498.t1 AT1G62610 30.244 205 133 6 27 225 4 204 6.24e-17 79.7
MS.gene033498.t1 AT3G03980 30.198 202 123 5 41 229 17 213 6.64e-17 79.7
MS.gene033498.t1 AT1G62610 30.244 205 133 6 27 225 5 205 7.12e-17 79.7
MS.gene033498.t1 AT1G62610 30.244 205 133 6 27 225 9 209 8.69e-17 79.3
MS.gene033498.t1 AT1G63380 30.392 204 134 5 27 225 5 205 1.63e-16 78.6
MS.gene033498.t1 AT1G63380 30.392 204 134 5 27 225 9 209 2.15e-16 78.6
MS.gene033498.t1 AT2G17845 28.431 204 137 4 38 234 47 248 2.57e-16 78.6
MS.gene033498.t1 AT3G06060 29.661 236 147 6 30 262 29 248 3.31e-16 78.6
MS.gene033498.t1 AT3G06060 29.661 236 147 6 30 262 46 265 3.41e-16 78.6
MS.gene033498.t1 AT1G07440 29.592 196 126 4 38 229 12 199 1.42e-15 75.9
MS.gene033498.t1 AT3G55290 30.732 205 133 6 26 225 6 206 1.58e-15 75.9
MS.gene033498.t1 AT4G13180 31.818 198 118 6 41 229 16 205 1.92e-15 75.5
MS.gene033498.t1 AT3G55290 31.156 199 128 6 32 225 13 207 2.05e-15 75.5
MS.gene033498.t1 AT1G67730 31.720 186 116 8 45 224 56 236 2.56e-15 75.9
MS.gene033498.t1 AT5G18210 27.835 194 134 4 41 229 11 203 3.29e-15 74.7
MS.gene033498.t1 AT3G26760 28.866 194 129 4 38 229 36 222 3.56e-15 75.1
MS.gene033498.t1 AT5G18210 27.835 194 134 4 41 229 11 203 3.61e-15 74.7
MS.gene033498.t1 AT2G29150 30.846 201 133 6 29 229 8 202 3.93e-15 74.7
MS.gene033498.t1 AT2G29370 28.500 200 138 5 30 229 9 203 8.54e-15 73.6
MS.gene033498.t1 AT2G29350 29.189 185 127 4 45 229 22 202 1.12e-14 72.4
MS.gene033498.t1 AT1G54870 30.472 233 133 9 29 241 76 299 1.20e-14 73.9
MS.gene033498.t1 AT1G54870 30.472 233 133 9 29 241 74 297 1.39e-14 73.9
MS.gene033498.t1 AT3G26770 28.061 196 128 4 38 229 41 227 2.37e-14 72.8
MS.gene033498.t1 AT2G29350 29.189 185 127 4 45 229 22 202 3.73e-14 71.6
MS.gene033498.t1 AT5G50770 28.037 214 145 6 36 247 43 249 4.41e-14 72.4
MS.gene033498.t1 AT3G04000 28.218 202 128 7 41 229 17 214 5.10e-14 71.2
MS.gene033498.t1 AT5G19200 30.688 189 120 5 44 229 41 221 1.36e-13 70.9
MS.gene033498.t1 AT4G03140 30.412 194 127 5 38 230 78 264 1.59e-13 70.9
MS.gene033498.t1 AT1G24470 29.461 241 152 9 5 237 16 246 1.10e-12 68.2
MS.gene033498.t1 AT5G06060 28.351 194 127 4 41 230 12 197 1.21e-12 67.4
MS.gene033498.t1 AT1G24360 26.667 195 133 5 38 229 74 261 1.31e-12 67.8
MS.gene033498.t1 AT1G52340 29.707 239 161 6 41 276 21 255 1.57e-12 67.4
MS.gene033498.t1 AT2G29290 26.344 186 131 4 45 229 14 194 3.47e-12 65.9
MS.gene033498.t1 AT2G47130 29.500 200 128 5 38 233 6 196 9.74e-12 64.7
MS.gene033498.t1 AT1G07440 28.070 171 111 4 38 204 12 174 2.70e-11 62.0
MS.gene033498.t1 AT2G47120 26.872 227 151 5 38 258 6 223 2.75e-11 63.2
MS.gene033498.t1 AT2G47120 26.872 227 151 5 38 258 7 224 2.83e-11 63.2

Find 76 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCAAAATATGCACTAAA+TGG 0.167869 7.3:-27093669 MS.gene033498:CDS
TGCCGCAACTCATGGCTTAA+AGG 0.228023 7.3:-27092473 MS.gene033498:CDS
TATTCTTTGAGCCTGCTATT+TGG 0.229244 7.3:-27092085 MS.gene033498:CDS
GCTCAACAACTTGCAAGTTT+AGG 0.229765 7.3:-27095195 MS.gene033498:CDS
CTCAACAACTTGCAAGTTTA+GGG 0.247419 7.3:-27095194 MS.gene033498:CDS
AGAGTTATTTGCTGTTTCTA+TGG 0.249623 7.3:+27093487 None:intergenic
TCTTCAATTAGTTCATGTTT+TGG 0.284039 7.3:+27096054 None:intergenic
ATTCTTTGAGCCTGCTATTT+GGG 0.298881 7.3:-27092084 MS.gene033498:CDS
GTTCAATACATGCCAACTAT+TGG 0.332078 7.3:-27092272 MS.gene033498:CDS
ATATAATCAACCCCAGAATC+TGG 0.336512 7.3:+27094926 None:intergenic
CGAGTAAAGTCGCAGCTAAA+AGG 0.336637 7.3:-27095129 MS.gene033498:intron
CATCTGGTGAAGATTCTCTT+AGG 0.351543 7.3:-27094979 MS.gene033498:CDS
GCTGCGACTTTACTCGGTTT+AGG 0.384760 7.3:+27095136 None:intergenic
TTCAAATTCGCCACCGCCTA+TGG 0.388934 7.3:-27096185 MS.gene033498:intron
GGAAGCTTGGATATCATATC+AGG 0.398701 7.3:-27092452 MS.gene033498:intron
AAAGACACCTGCCCCAGGTC+AGG 0.404524 7.3:-27093703 MS.gene033498:CDS
TTACCGTTGGATTTAACATC+TGG 0.405215 7.3:-27094995 MS.gene033498:CDS
ACTGGTGCCAGTCGTGGAAT+TGG 0.416369 7.3:-27095929 MS.gene033498:intron
GAGTTATTTGCTGTTTCTAT+GGG 0.430931 7.3:+27093488 None:intergenic
ATTTGCTGTTTCTATGGGAC+CGG 0.436779 7.3:+27093493 None:intergenic
CAACCCCAGAATCTGGGAAA+AGG 0.437165 7.3:+27094933 None:intergenic
CCTTGCAGATAGTATTAACT+TGG 0.441463 7.3:+27095170 None:intergenic
CTCATGGCTTAAAGGAAGCT+TGG 0.442157 7.3:-27092465 MS.gene033498:CDS
TAAATCCAACGGTAAAATCT+TGG 0.446034 7.3:+27095003 None:intergenic
CTTCAAAATATGCACTAAAT+GGG 0.451304 7.3:-27093668 MS.gene033498:CDS
TCCTCAACATGAAAGGTGTC+AGG 0.479332 7.3:+27094142 None:intergenic
AACCCCAGAATCTGGGAAAA+GGG 0.484607 7.3:+27094934 None:intergenic
TGTTATACCAATTCCACGAC+TGG 0.486639 7.3:+27095922 None:intergenic
ACGATTATTGCCGCAACTCA+TGG 0.488010 7.3:-27092481 MS.gene033498:CDS
ACATGAACTAATTGAAGATA+AGG 0.492696 7.3:-27096049 MS.gene033498:intron
TTGGGACAATAACTCTTACA+AGG 0.493035 7.3:-27094167 MS.gene033498:CDS
GCTCTGTCAGAAAGGAATCC+AGG 0.495667 7.3:-27093531 MS.gene033498:CDS
CGGGACAGACAACAGTTACC+TGG 0.497237 7.3:+27093513 None:intergenic
TCCTGACACCTTTCATGTTG+AGG 0.504874 7.3:-27094143 MS.gene033498:CDS
CAGGTAACTGTTGTCTGTCC+CGG 0.507865 7.3:-27093512 MS.gene033498:CDS
AGCAAATAACTCTGGATCGC+AGG 0.509219 7.3:-27093477 MS.gene033498:CDS
ATAGAAACAGCAAATAACTC+TGG 0.517811 7.3:-27093485 MS.gene033498:CDS
TGACACCTTTCATGTTGAGG+AGG 0.522261 7.3:-27094140 MS.gene033498:CDS
CTTCCATTCCTTGCGTTCAG+AGG 0.522843 7.3:-27093643 MS.gene033498:intron
TATAATCAACCCCAGAATCT+GGG 0.524930 7.3:+27094927 None:intergenic
GCTGAGTATACAGCCTGACC+TGG 0.530220 7.3:+27093690 None:intergenic
TTCCTTTAAGCCATGAGTTG+CGG 0.535357 7.3:+27092471 None:intergenic
TGGATTACTGGTGCCAGTCG+TGG 0.536159 7.3:-27095935 MS.gene033498:CDS
TGGTTGCAGCTCTGTCAGAA+AGG 0.538033 7.3:-27093539 MS.gene033498:intron
GCAAAGGTGCATACCTCAGA+TGG 0.538341 7.3:+27093452 None:intergenic
TGAATAAGAAGAGTAACAAG+AGG 0.547619 7.3:+27096204 None:intergenic
GACACCTTTCATGTTGAGGA+GGG 0.548237 7.3:-27094139 MS.gene033498:CDS
TATCAGATGAGTAGTGCAGC+AGG 0.548313 7.3:-27093726 MS.gene033498:intron
TATACAGCCTGACCTGGGGC+AGG 0.551365 7.3:+27093696 None:intergenic
CTGAGTATACAGCCTGACCT+GGG 0.554815 7.3:+27093691 None:intergenic
TTCATGTTGAGGAGGGGCAA+AGG 0.555421 7.3:-27094132 MS.gene033498:CDS
TGGTGAAGATTCTCTTAGGA+AGG 0.556573 7.3:-27094975 MS.gene033498:CDS
GCAGGAAAGACACCTGCCCC+AGG 0.558382 7.3:-27093708 MS.gene033498:CDS
TTGCCCCTCCTCAACATGAA+AGG 0.565586 7.3:+27094135 None:intergenic
ATACCTCTGAACGCAAGGAA+TGG 0.573698 7.3:+27093640 None:intergenic
CCAAGTTAATACTATCTGCA+AGG 0.576659 7.3:-27095170 MS.gene033498:CDS
AGTGGAGGCTGCTAAAGAGA+AGG 0.582662 7.3:-27092116 MS.gene033498:CDS
TGAGAAAATACCATAGGCGG+TGG 0.588552 7.3:+27096175 None:intergenic
TTTGCTGTTTCTATGGGACC+GGG 0.597122 7.3:+27093494 None:intergenic
ACTTTATACCTCTGAACGCA+AGG 0.597450 7.3:+27093635 None:intergenic
ACACCTTTCATGTTGAGGAG+GGG 0.599857 7.3:-27094138 MS.gene033498:CDS
CAAGTTAATACTATCTGCAA+GGG 0.605596 7.3:-27095169 MS.gene033498:CDS
TGGATCGCAGGTTCCATCTG+AGG 0.608655 7.3:-27093465 MS.gene033498:intron
AGATACATGACAGCAAGCAC+AGG 0.608883 7.3:+27092296 None:intergenic
TCACCAGATGTTAAATCCAA+CGG 0.609295 7.3:+27094992 None:intergenic
GTGGAGGCTGCTAAAGAGAA+GGG 0.610191 7.3:-27092115 MS.gene033498:CDS
TTGACAGAAGCGTGTGTCAG+CGG 0.614113 7.3:-27092521 MS.gene033498:intron
TCAACAACTTGCAAGTTTAG+GGG 0.622807 7.3:-27095193 MS.gene033498:CDS
GTAACAAGAGGAAGATACAG+AGG 0.625818 7.3:+27096216 None:intergenic
ACCAGGTAAGCATGCTGACG+AGG 0.633784 7.3:-27095026 MS.gene033498:intron
AAATACCTTGAGACTCTCCT+CGG 0.639284 7.3:+27094347 None:intergenic
CTCCTCGGTTACATCTAAGA+CGG 0.647183 7.3:+27094362 None:intergenic
GAGTGAGAAAATACCATAGG+CGG 0.656174 7.3:+27096172 None:intergenic
TGTAACCGAGGAGAGTCTCA+AGG 0.656987 7.3:-27094352 MS.gene033498:intron
TGAGTATACAGCCTGACCTG+GGG 0.691014 7.3:+27093692 None:intergenic
ATCCGTCTTAGATGTAACCG+AGG 0.697923 7.3:-27094364 MS.gene033498:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATACATTTATAAAC+AGG + chr7.3:27094535-27094554 None:intergenic 10.0%
!!! ATTATTTTAAACTATGAATA+TGG - chr7.3:27095201-27095220 MS.gene033498:CDS 10.0%
!!! TCTTTATTTTAACAATTTTT+TGG - chr7.3:27092159-27092178 MS.gene033498:intron 10.0%
!! ATGAAATATAAATAATCCTA+TGG + chr7.3:27092433-27092452 None:intergenic 15.0%
!! CAAATATTACTAAACTAATA+AGG + chr7.3:27095940-27095959 None:intergenic 15.0%
!! CAATAAAACATATTAGTTAT+TGG + chr7.3:27094469-27094488 None:intergenic 15.0%
!! GTAATACCTATTATAAAAAA+CGG + chr7.3:27095497-27095516 None:intergenic 15.0%
!! TAAGAATGGTTTAAATTAAA+TGG + chr7.3:27095385-27095404 None:intergenic 15.0%
!!! ATTTTTTCTTTTGAAATAGT+AGG - chr7.3:27095165-27095184 MS.gene033498:CDS 15.0%
!!! TTTCCTTTTATTTGATTTTA+GGG - chr7.3:27092934-27092953 MS.gene033498:intron 15.0%
!!! TTTTCCTTTTATTTGATTTT+AGG - chr7.3:27092933-27092952 MS.gene033498:intron 15.0%
!! AAAACATGTAAACATAAACT+TGG + chr7.3:27095075-27095094 None:intergenic 20.0%
!! AATGACTTTATATAAATGAC+TGG - chr7.3:27096140-27096159 MS.gene033498:intron 20.0%
!! ATACATTTATAAACAGGAAA+TGG + chr7.3:27094529-27094548 None:intergenic 20.0%
!! CTAGTAAGTGATATAATTTA+GGG - chr7.3:27092641-27092660 MS.gene033498:intron 20.0%
!! TACAAATAATGAAAAGATTC+TGG + chr7.3:27093007-27093026 None:intergenic 20.0%
!! TACATTTATAAACAGGAAAT+GGG + chr7.3:27094528-27094547 None:intergenic 20.0%
!! TAGAAAATACATCATTATTG+TGG - chr7.3:27094272-27094291 MS.gene033498:intron 20.0%
!! TCAGGTAAAAAAATTGTATT+AGG - chr7.3:27095862-27095881 MS.gene033498:intron 20.0%
!!! AAATAGCCGTTTTTTATAAT+AGG - chr7.3:27095488-27095507 MS.gene033498:intron 20.0%
!!! ACTGTTTTGATCAATTTATT+AGG - chr7.3:27092191-27092210 MS.gene033498:intron 20.0%
!!! ATAATCTCTTATTTTGGTTA+TGG - chr7.3:27094219-27094238 MS.gene033498:intron 20.0%
!!! GTCAAGACATAATTTTAAAA+GGG + chr7.3:27095760-27095779 None:intergenic 20.0%
!!! TCTTTGATAATCTCTTATTT+TGG - chr7.3:27094213-27094232 MS.gene033498:intron 20.0%
!!! TGTCAAGACATAATTTTAAA+AGG + chr7.3:27095761-27095780 None:intergenic 20.0%
!!! TTTTGAAAGAAAACTAAAAG+CGG + chr7.3:27094036-27094055 None:intergenic 20.0%
! AACTACACTATATACTTGAA+CGG - chr7.3:27094359-27094378 MS.gene033498:CDS 25.0%
! AAGCCCTAAAATCAAATAAA+AGG + chr7.3:27092940-27092959 None:intergenic 25.0%
! AAGTTTATACTGTAAATTCC+AGG + chr7.3:27095638-27095657 None:intergenic 25.0%
! AATTTGATCAAAAACACTTG+TGG + chr7.3:27092869-27092888 None:intergenic 25.0%
! ACATGAACTAATTGAAGATA+AGG - chr7.3:27092247-27092266 MS.gene033498:intron 25.0%
! ACATGTAGTATACATAAACT+TGG + chr7.3:27095010-27095029 None:intergenic 25.0%
! ACATTTATAAACAGGAAATG+GGG + chr7.3:27094527-27094546 None:intergenic 25.0%
! ACTTTATATAAATGACTGGT+AGG - chr7.3:27096144-27096163 MS.gene033498:intron 25.0%
! AGAACTTGATCATTTCATTA+TGG + chr7.3:27092308-27092327 None:intergenic 25.0%
! ATATGATCTACACTTCTTAT+CGG - chr7.3:27095443-27095462 MS.gene033498:intron 25.0%
! ATCAATGAATGTATATGAAG+GGG - chr7.3:27093070-27093089 MS.gene033498:intron 25.0%
! ATTACCAGAAAAATAAAGCA+GGG + chr7.3:27092836-27092855 None:intergenic 25.0%
! ATTCAATTTGATTAACCCTT+AGG - chr7.3:27092808-27092827 MS.gene033498:intron 25.0%
! ATTTGATCAAAAACACTTGT+GGG + chr7.3:27092868-27092887 None:intergenic 25.0%
! CATCAATGAATGTATATGAA+GGG - chr7.3:27093069-27093088 MS.gene033498:intron 25.0%
! CCTAAATTATATCACTTACT+AGG + chr7.3:27092643-27092662 None:intergenic 25.0%
! CCTAGTAAGTGATATAATTT+AGG - chr7.3:27092640-27092659 MS.gene033498:intron 25.0%
! CTTCAAAATATGCACTAAAT+GGG - chr7.3:27094628-27094647 MS.gene033498:intron 25.0%
! GACATAATGCATATAAAAGA+TGG + chr7.3:27096079-27096098 None:intergenic 25.0%
! GTAATATTTGTTCACTCAAT+CGG - chr7.3:27095950-27095969 MS.gene033498:intron 25.0%
! TATGAAAGTGATTTCATTGT+GGG + chr7.3:27092473-27092492 None:intergenic 25.0%
! TATTTGTTTCATTTCTTTCC+AGG - chr7.3:27092333-27092352 MS.gene033498:intron 25.0%
! TCACAGATATAAATGAGTAA+CGG + chr7.3:27093203-27093222 None:intergenic 25.0%
! TCATATACATTCATTGATGA+GGG + chr7.3:27093068-27093087 None:intergenic 25.0%
! TCATCAATGAATGTATATGA+AGG - chr7.3:27093068-27093087 MS.gene033498:intron 25.0%
! TCATCATCCTTATATCATTA+TGG + chr7.3:27093791-27093810 None:intergenic 25.0%
! TGATCATTTCATTATGGTAT+TGG + chr7.3:27092302-27092321 None:intergenic 25.0%
! TGCAACCATAAAAAAATTAG+CGG + chr7.3:27094745-27094764 None:intergenic 25.0%
! TTATGAAAGTGATTTCATTG+TGG + chr7.3:27092474-27092493 None:intergenic 25.0%
! TTCATATACATTCATTGATG+AGG + chr7.3:27093069-27093088 None:intergenic 25.0%
! TTTATATCTGTGAACAGATA+TGG - chr7.3:27093210-27093229 MS.gene033498:intron 25.0%
! TTTCACACTTATATTTCCAT+AGG - chr7.3:27092414-27092433 MS.gene033498:intron 25.0%
! TTTGAAAGAAAACTAAAAGC+GGG + chr7.3:27094035-27094054 None:intergenic 25.0%
!! AAATCACACATTAATGGATA+AGG + chr7.3:27093243-27093262 None:intergenic 25.0%
!! ACATTTGATGTCAATGTTTT+TGG - chr7.3:27094110-27094129 MS.gene033498:intron 25.0%
!! CATTTGATGTCAATGTTTTT+GGG - chr7.3:27094111-27094130 MS.gene033498:intron 25.0%
!! TCTTCAATTAGTTCATGTTT+TGG + chr7.3:27092245-27092264 None:intergenic 25.0%
!! TGTCATTTGTTTATATCTGT+AGG - chr7.3:27093591-27093610 MS.gene033498:intron 25.0%
!! TTTTCCAATAGAAAAACTCT+GGG + chr7.3:27095417-27095436 None:intergenic 25.0%
!!! AATTTTGCCTCTAAAATTGT+AGG + chr7.3:27092780-27092799 None:intergenic 25.0%
!!! ATGTATACTACATGTTTTGA+AGG - chr7.3:27095015-27095034 MS.gene033498:CDS 25.0%
!!! ATTTTGCCTCTAAAATTGTA+GGG + chr7.3:27092779-27092798 None:intergenic 25.0%
!!! TACAATTTTAGAGGCAAAAT+TGG - chr7.3:27092779-27092798 MS.gene033498:intron 25.0%
AAAATAGTAGATTCCGAAAC+TGG + chr7.3:27092914-27092933 None:intergenic 30.0%
ACAAACAAGCTAGAACATAA+AGG + chr7.3:27095663-27095682 None:intergenic 30.0%
ACACATAGTATCTCAAAAAG+AGG + chr7.3:27093564-27093583 None:intergenic 30.0%
ACTAGATGAAAGTTATCAGA+AGG - chr7.3:27092680-27092699 MS.gene033498:intron 30.0%
ACTCTTTACAAGTTAACAGA+AGG + chr7.3:27092583-27092602 None:intergenic 30.0%
AGTTAATGAAGATACTTGCA+TGG + chr7.3:27094944-27094963 None:intergenic 30.0%
ATAGAAACAGCAAATAACTC+TGG - chr7.3:27094811-27094830 MS.gene033498:intron 30.0%
ATTCCGAAACTGGAATTAAA+TGG + chr7.3:27092904-27092923 None:intergenic 30.0%
CAAACAAGCTAGAACATAAA+GGG + chr7.3:27095662-27095681 None:intergenic 30.0%
CAAGTTAATACTATCTGCAA+GGG - chr7.3:27093127-27093146 MS.gene033498:intron 30.0%
CATTACCAGAAAAATAAAGC+AGG + chr7.3:27092837-27092856 None:intergenic 30.0%
CCTATAAACGTAAAACAAGA+GGG - chr7.3:27093518-27093537 MS.gene033498:CDS 30.0%
CGTAGCAAAATTATGTTATG+TGG - chr7.3:27094248-27094267 MS.gene033498:intron 30.0%
CTAGATGAAAGTTATCAGAA+GGG - chr7.3:27092681-27092700 MS.gene033498:intron 30.0%
CTATAAACGTAAAACAAGAG+GGG - chr7.3:27093519-27093538 MS.gene033498:CDS 30.0%
CTGATATAACAAGCATATGT+AGG + chr7.3:27093490-27093509 None:intergenic 30.0%
GCTTCAAAATATGCACTAAA+TGG - chr7.3:27094627-27094646 MS.gene033498:intron 30.0%
GTATGCAAATCACACATTAA+TGG + chr7.3:27093249-27093268 None:intergenic 30.0%
GTCTTTCTTTACACTAACAA+TGG + chr7.3:27094881-27094900 None:intergenic 30.0%
TAAATCCAACGGTAAAATCT+TGG + chr7.3:27093296-27093315 None:intergenic 30.0%
TATAAACGTAAAACAAGAGG+GGG - chr7.3:27093520-27093539 MS.gene033498:CDS 30.0%
TATATAAATGACTGGTAGGT+TGG - chr7.3:27096148-27096167 MS.gene033498:intron 30.0%
TATTTCATGAATGTGACTCT+TGG - chr7.3:27093967-27093986 MS.gene033498:intron 30.0%
TGAACATATCAGAATTTGCA+TGG - chr7.3:27093455-27093474 MS.gene033498:intron 30.0%
TGAATAAGAAGAGTAACAAG+AGG + chr7.3:27092095-27092114 None:intergenic 30.0%
TGGTTGATTGCTTTATCTAA+TGG - chr7.3:27093426-27093445 MS.gene033498:intron 30.0%
TTAAACCATTCTTAATGCTC+TGG - chr7.3:27095391-27095410 MS.gene033498:intron 30.0%
TTACACGCCATAATGATATA+AGG - chr7.3:27093781-27093800 MS.gene033498:intron 30.0%
TTGAAAGAAAACTAAAAGCG+GGG + chr7.3:27094034-27094053 None:intergenic 30.0%
! AAAAGTCTTTTTCCACTTTG+TGG - chr7.3:27095296-27095315 MS.gene033498:intron 30.0%
! AAGAAGTGTAGATCATATGA+AGG + chr7.3:27095441-27095460 None:intergenic 30.0%
! AGAAGTGTAGATCATATGAA+GGG + chr7.3:27095440-27095459 None:intergenic 30.0%
! ATAAGGATGATGATTTGTGA+GGG - chr7.3:27093798-27093817 MS.gene033498:intron 30.0%
! ATGCCATTTAATTCCAGTTT+CGG - chr7.3:27092898-27092917 MS.gene033498:intron 30.0%
! GTTTTCCAATAGAAAAACTC+TGG + chr7.3:27095418-27095437 None:intergenic 30.0%
! TAACTTCAGACACATTTTGA+TGG - chr7.3:27093663-27093682 MS.gene033498:CDS 30.0%
! TATAAGGATGATGATTTGTG+AGG - chr7.3:27093797-27093816 MS.gene033498:intron 30.0%
! TTTGAAATAGTAGGTATGCA+CGG - chr7.3:27095174-27095193 MS.gene033498:CDS 30.0%
!! AACTTCAGACACATTTTGAT+GGG - chr7.3:27093664-27093683 MS.gene033498:CDS 30.0%
!! AGAGTTATTTGCTGTTTCTA+TGG + chr7.3:27094812-27094831 None:intergenic 30.0%
!! GAGTTATTTGCTGTTTCTAT+GGG + chr7.3:27094811-27094830 None:intergenic 30.0%
!!! ATGCACCGCTAATTTTTTTA+TGG - chr7.3:27094737-27094756 MS.gene033498:intron 30.0%
!!! GGGAACATTTTTTAAAGCTT+TGG + chr7.3:27094009-27094028 None:intergenic 30.0%
!!! TCATTTCTTTCCAGGTTTTT+TGG - chr7.3:27092341-27092360 MS.gene033498:intron 30.0%
!!! TTTTGCCTCTAAAATTGTAG+GGG + chr7.3:27092778-27092797 None:intergenic 30.0%
AAAAACGGCTATTTACAGTG+TGG + chr7.3:27095482-27095501 None:intergenic 35.0%
AAAATAAAGCAGGGAACCTA+AGG + chr7.3:27092827-27092846 None:intergenic 35.0%
AAATAAAGCAGGGAACCTAA+GGG + chr7.3:27092826-27092845 None:intergenic 35.0%
AAGGCACAAAAGTTGAAAAC+TGG + chr7.3:27095921-27095940 None:intergenic 35.0%
ACATCAAATGTTGCCTAATC+AGG + chr7.3:27094101-27094120 None:intergenic 35.0%
ACTAACAATGGATGCTTAGT+TGG + chr7.3:27094869-27094888 None:intergenic 35.0%
AGGGAAAGAACAAACTTCAA+TGG + chr7.3:27095741-27095760 None:intergenic 35.0%
AGTGAGTGAGAAAATACCAT+AGG + chr7.3:27092130-27092149 None:intergenic 35.0%
ATATAATCAACCCCAGAATC+TGG + chr7.3:27093373-27093392 None:intergenic 35.0%
ATGAGCCAAAAACCAATAGT+TGG + chr7.3:27096039-27096058 None:intergenic 35.0%
CATTGGTAGAGGATAGTTTA+AGG + chr7.3:27092970-27092989 None:intergenic 35.0%
CCAAGTTAATACTATCTGCA+AGG - chr7.3:27093126-27093145 MS.gene033498:intron 35.0%
CCTTGCAGATAGTATTAACT+TGG + chr7.3:27093129-27093148 None:intergenic 35.0%
CTCAACAACTTGCAAGTTTA+GGG - chr7.3:27093102-27093121 MS.gene033498:intron 35.0%
GAAACTGGAATTAAATGGCA+TGG + chr7.3:27092899-27092918 None:intergenic 35.0%
GAACACTAGAATCAAGAAAG+TGG - chr7.3:27093740-27093759 MS.gene033498:intron 35.0%
GCCTATAAACGTAAAACAAG+AGG - chr7.3:27093517-27093536 MS.gene033498:CDS 35.0%
GTTCAATACATGCCAACTAT+TGG - chr7.3:27096024-27096043 MS.gene033498:intron 35.0%
TAAAGCAATCAACCACTTAC+AGG + chr7.3:27093421-27093440 None:intergenic 35.0%
TAATGAAGATACTTGCATGG+TGG + chr7.3:27094941-27094960 None:intergenic 35.0%
TATAATCAACCCCAGAATCT+GGG + chr7.3:27093372-27093391 None:intergenic 35.0%
TATTCTTTGAGCCTGCTATT+TGG - chr7.3:27096211-27096230 MS.gene033498:CDS 35.0%
TCAACAACTTGCAAGTTTAG+GGG - chr7.3:27093103-27093122 MS.gene033498:intron 35.0%
TCACCAGATGTTAAATCCAA+CGG + chr7.3:27093307-27093326 None:intergenic 35.0%
TCTTGATTTAGCAATCTCAG+TGG + chr7.3:27094973-27094992 None:intergenic 35.0%
TGCAAAGAAATCATTGGTAG+AGG + chr7.3:27092981-27093000 None:intergenic 35.0%
TTACCGTTGGATTTAACATC+TGG - chr7.3:27093301-27093320 MS.gene033498:intron 35.0%
TTCAAGACAGAAGACAAGAT+AGG + chr7.3:27095552-27095571 None:intergenic 35.0%
TTGAAATAGTAGGTATGCAC+GGG - chr7.3:27095175-27095194 MS.gene033498:CDS 35.0%
TTGGGACAATAACTCTTACA+AGG - chr7.3:27094129-27094148 MS.gene033498:CDS 35.0%
TTGTCTCTTCGCAAATTTCA+GGG - chr7.3:27092739-27092758 MS.gene033498:intron 35.0%
TTGTCTTCTGTCTTGAAACA+TGG - chr7.3:27095555-27095574 MS.gene033498:intron 35.0%
TTTGAATACGTCTGACAACT+TGG - chr7.3:27092556-27092575 MS.gene033498:intron 35.0%
TTTGTCTCTTCGCAAATTTC+AGG - chr7.3:27092738-27092757 MS.gene033498:intron 35.0%
! ATTCTTTGAGCCTGCTATTT+GGG - chr7.3:27096212-27096231 MS.gene033498:CDS 35.0%
! TGGCTTTGCAAAGAAATCAT+TGG + chr7.3:27092987-27093006 None:intergenic 35.0%
! TTACTCCTTTTCTCCTGATT+AGG - chr7.3:27094085-27094104 MS.gene033498:intron 35.0%
! TTTTTCCACTTTGTGGATTC+AGG - chr7.3:27095303-27095322 MS.gene033498:intron 35.0%
!!! AACTATTGGTTTTTGGCTCA+TGG - chr7.3:27096038-27096057 MS.gene033498:intron 35.0%
!!! ACATGCCAACTATTGGTTTT+TGG - chr7.3:27096031-27096050 MS.gene033498:intron 35.0%
!!! CCCTCTTGTTTTACGTTTAT+AGG + chr7.3:27093521-27093540 None:intergenic 35.0%
!!! TTCCAGGTTTTTTGGATTAC+TGG - chr7.3:27092349-27092368 MS.gene033498:intron 35.0%
AAAGAAAACTAAAAGCGGGG+AGG + chr7.3:27094031-27094050 None:intergenic 40.0%
AAATACCTTGAGACTCTCCT+CGG + chr7.3:27093952-27093971 None:intergenic 40.0%
AAGAAAACTAAAAGCGGGGA+GGG + chr7.3:27094030-27094049 None:intergenic 40.0%
AATGGATGCTTAGTTGGCAA+AGG + chr7.3:27094863-27094882 None:intergenic 40.0%
ACTTTATACCTCTGAACGCA+AGG + chr7.3:27094664-27094683 None:intergenic 40.0%
CACCAGTAATCCAAAAAACC+TGG + chr7.3:27092354-27092373 None:intergenic 40.0%
CATCTGGTGAAGATTCTCTT+AGG - chr7.3:27093317-27093336 MS.gene033498:intron 40.0%
GAGTGAGAAAATACCATAGG+CGG + chr7.3:27092127-27092146 None:intergenic 40.0%
GCTCAACAACTTGCAAGTTT+AGG - chr7.3:27093101-27093120 MS.gene033498:intron 40.0%
GGAAGCTTGGATATCATATC+AGG - chr7.3:27095844-27095863 MS.gene033498:intron 40.0%
GTAACAAGAGGAAGATACAG+AGG + chr7.3:27092083-27092102 None:intergenic 40.0%
TGGTGAAGATTCTCTTAGGA+AGG - chr7.3:27093321-27093340 MS.gene033498:intron 40.0%
TGTCTCTTCGCAAATTTCAG+GGG - chr7.3:27092740-27092759 MS.gene033498:intron 40.0%
TGTTATACCAATTCCACGAC+TGG + chr7.3:27092377-27092396 None:intergenic 40.0%
TGTTGCCTAATCAGGAGAAA+AGG + chr7.3:27094093-27094112 None:intergenic 40.0%
TTCCTTTAAGCCATGAGTTG+CGG + chr7.3:27095828-27095847 None:intergenic 40.0%
TTGAATTACGTCGAGCAACT+TGG + chr7.3:27092707-27092726 None:intergenic 40.0%
! AATCCCTTTTCCCAGATTCT+GGG - chr7.3:27093359-27093378 MS.gene033498:intron 40.0%
! CCTGCTATTTGGGAAAAAGA+AGG - chr7.3:27096222-27096241 MS.gene033498:CDS 40.0%
! CCTTCTTTTTCCCAAATAGC+AGG + chr7.3:27096225-27096244 None:intergenic 40.0%
!! ATTTGCTGTTTCTATGGGAC+CGG + chr7.3:27094806-27094825 None:intergenic 40.0%
!! CTTTTAGCTGCGACTTTACT+CGG + chr7.3:27093169-27093188 None:intergenic 40.0%
!! GTAGGTTGGTAAAAATCGAG+TGG - chr7.3:27096162-27096181 MS.gene033498:intron 40.0%
!! GTCATTTTGTGGTGGTATGT+GGG - chr7.3:27094186-27094205 MS.gene033498:CDS 40.0%
!!! GGTTCCCTGCTTTATTTTTC+TGG - chr7.3:27092829-27092848 MS.gene033498:intron 40.0%
AAATTTCAGGGGGTAAGTGC+TGG - chr7.3:27092751-27092770 MS.gene033498:intron 45.0%
AACCCCAGAATCTGGGAAAA+GGG + chr7.3:27093365-27093384 None:intergenic 45.0%
ACACCTTTCATGTTGAGGAG+GGG - chr7.3:27094158-27094177 MS.gene033498:CDS 45.0%
ACGATTATTGCCGCAACTCA+TGG - chr7.3:27095815-27095834 MS.gene033498:intron 45.0%
AGAAAACTAAAAGCGGGGAG+GGG + chr7.3:27094029-27094048 None:intergenic 45.0%
AGATACATGACAGCAAGCAC+AGG + chr7.3:27096003-27096022 None:intergenic 45.0%
AGCAAATAACTCTGGATCGC+AGG - chr7.3:27094819-27094838 MS.gene033498:intron 45.0%
ATACCTCTGAACGCAAGGAA+TGG + chr7.3:27094659-27094678 None:intergenic 45.0%
ATCCGTCTTAGATGTAACCG+AGG - chr7.3:27093932-27093951 MS.gene033498:intron 45.0%
CGAGTAAAGTCGCAGCTAAA+AGG - chr7.3:27093167-27093186 MS.gene033498:intron 45.0%
CTCATGGCTTAAAGGAAGCT+TGG - chr7.3:27095831-27095850 MS.gene033498:intron 45.0%
CTCCTCGGTTACATCTAAGA+CGG + chr7.3:27093937-27093956 None:intergenic 45.0%
CTTAGCATAGCCAGAAGCTA+TGG + chr7.3:27094446-27094465 None:intergenic 45.0%
GACACCTTTCATGTTGAGGA+GGG - chr7.3:27094157-27094176 MS.gene033498:CDS 45.0%
GCAAGATGTTTGTGACTGCA+AGG - chr7.3:27094303-27094322 MS.gene033498:intron 45.0%
GTCTCTTCGCAAATTTCAGG+GGG - chr7.3:27092741-27092760 MS.gene033498:intron 45.0%
TATCAGATGAGTAGTGCAGC+AGG - chr7.3:27094570-27094589 MS.gene033498:intron 45.0%
TCCTGACACCTTTCATGTTG+AGG - chr7.3:27094153-27094172 MS.gene033498:CDS 45.0%
TGACACCTTTCATGTTGAGG+AGG - chr7.3:27094156-27094175 MS.gene033498:CDS 45.0%
TGAGAAAATACCATAGGCGG+TGG + chr7.3:27092124-27092143 None:intergenic 45.0%
! ATCCCTTTTCCCAGATTCTG+GGG - chr7.3:27093360-27093379 MS.gene033498:intron 45.0%
! ATTGAAGAGAAGCGCAAGCA+AGG - chr7.3:27095605-27095624 MS.gene033498:intron 45.0%
! CTGGACCCCTACAATTTTAG+AGG - chr7.3:27092770-27092789 MS.gene033498:intron 45.0%
! CTGGCCCAGAGTTTTTCTAT+TGG - chr7.3:27095410-27095429 MS.gene033498:intron 45.0%
! GAATCCCTTTTCCCAGATTC+TGG - chr7.3:27093358-27093377 MS.gene033498:intron 45.0%
! TGTGTGATTTGCATACCACC+AGG - chr7.3:27093253-27093272 MS.gene033498:intron 45.0%
!! GGTCATTTTGTGGTGGTATG+TGG - chr7.3:27094185-27094204 MS.gene033498:CDS 45.0%
!! GGTTGGTAAAAATCGAGTGG+AGG - chr7.3:27096165-27096184 MS.gene033498:intron 45.0%
!! TCCTCAACATGAAAGGTGTC+AGG + chr7.3:27094157-27094176 None:intergenic 45.0%
!! TTTGCTGTTTCTATGGGACC+GGG + chr7.3:27094805-27094824 None:intergenic 45.0%
!!! TAATAATAATTTTAAATGTT+CGG - chr7.3:27094383-27094402 MS.gene033498:intron 5.0%
AGCAGCCTGAATCCACAAAG+TGG + chr7.3:27095311-27095330 None:intergenic 50.0%
AGTGGAGGCTGCTAAAGAGA+AGG - chr7.3:27096180-27096199 MS.gene033498:intron 50.0%
CAACCCCAGAATCTGGGAAA+AGG + chr7.3:27093366-27093385 None:intergenic 50.0%
CAGGTAACTGTTGTCTGTCC+CGG - chr7.3:27094784-27094803 MS.gene033498:intron 50.0%
CCACTTGAATGTGTGTCGTG+CGG - chr7.3:27095689-27095708 MS.gene033498:intron 50.0%
CTGAGTATACAGCCTGACCT+GGG + chr7.3:27094608-27094627 None:intergenic 50.0%
CTTCCATTCCTTGCGTTCAG+AGG - chr7.3:27094653-27094672 MS.gene033498:intron 50.0%
GCTCTGTCAGAAAGGAATCC+AGG - chr7.3:27094765-27094784 MS.gene033498:intron 50.0%
GCTGCGACTTTACTCGGTTT+AGG + chr7.3:27093163-27093182 None:intergenic 50.0%
GCTTATGAGCGTCCTGTAAG+TGG - chr7.3:27093406-27093425 MS.gene033498:intron 50.0%
GTCTTGTGTGCCATAGCTTC+TGG - chr7.3:27094433-27094452 MS.gene033498:intron 50.0%
GTGGAGGCTGCTAAAGAGAA+GGG - chr7.3:27096181-27096200 MS.gene033498:intron 50.0%
TGAGTATACAGCCTGACCTG+GGG + chr7.3:27094607-27094626 None:intergenic 50.0%
TGCCGCAACTCATGGCTTAA+AGG - chr7.3:27095823-27095842 MS.gene033498:intron 50.0%
TGGTTGCAGCTCTGTCAGAA+AGG - chr7.3:27094757-27094776 MS.gene033498:intron 50.0%
TGTAACCGAGGAGAGTCTCA+AGG - chr7.3:27093944-27093963 MS.gene033498:intron 50.0%
TTCAAATTCGCCACCGCCTA+TGG - chr7.3:27092111-27092130 MS.gene033498:CDS 50.0%
TTCATGTTGAGGAGGGGCAA+AGG - chr7.3:27094164-27094183 MS.gene033498:CDS 50.0%
TTGCCCCTCCTCAACATGAA+AGG + chr7.3:27094164-27094183 None:intergenic 50.0%
! CGAGGCCAAGATTTTACCGT+TGG - chr7.3:27093288-27093307 MS.gene033498:intron 50.0%
! CTGGGCCAGAGCATTAAGAA+TGG + chr7.3:27095399-27095418 None:intergenic 50.0%
! GCAAAGGTGCATACCTCAGA+TGG + chr7.3:27094847-27094866 None:intergenic 50.0%
! TTGACAGAAGCGTGTGTCAG+CGG - chr7.3:27095775-27095794 MS.gene033498:intron 50.0%
!! GAGGGGCAAAGGTCATTTTG+TGG - chr7.3:27094175-27094194 MS.gene033498:CDS 50.0%
!! GGGCAAAGGTCATTTTGTGG+TGG - chr7.3:27094178-27094197 MS.gene033498:CDS 50.0%
ACCAGGTAAGCATGCTGACG+AGG - chr7.3:27093270-27093289 MS.gene033498:intron 55.0%
CCGCACGACACACATTCAAG+TGG + chr7.3:27095692-27095711 None:intergenic 55.0%
CGCAAGCAAGGTCTTAGACC+TGG - chr7.3:27095617-27095636 MS.gene033498:intron 55.0%
CGGGACAGACAACAGTTACC+TGG + chr7.3:27094786-27094805 None:intergenic 55.0%
GCTGAGTATACAGCCTGACC+TGG + chr7.3:27094609-27094628 None:intergenic 55.0%
TCGTCAGCATGCTTACCTGG+TGG + chr7.3:27093271-27093290 None:intergenic 55.0%
TGGATCGCAGGTTCCATCTG+AGG - chr7.3:27094831-27094850 MS.gene033498:intron 55.0%
! ACTGGTGCCAGTCGTGGAAT+TGG - chr7.3:27092367-27092386 MS.gene033498:intron 55.0%
! TGATGGGTGTGCTTGCATGC+TGG - chr7.3:27093680-27093699 MS.gene033498:CDS 55.0%
! TGGATTACTGGTGCCAGTCG+TGG - chr7.3:27092361-27092380 MS.gene033498:intron 55.0%
AAAGACACCTGCCCCAGGTC+AGG - chr7.3:27094593-27094612 MS.gene033498:intron 60.0%
GCCTCGTCAGCATGCTTACC+TGG + chr7.3:27093274-27093293 None:intergenic 60.0%
TATACAGCCTGACCTGGGGC+AGG + chr7.3:27094603-27094622 None:intergenic 60.0%
GCAGGAAAGACACCTGCCCC+AGG - chr7.3:27094588-27094607 MS.gene033498:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27092066 27096252 27092066 ID=MS.gene033498
chr7.3 mRNA 27092066 27096252 27092066 ID=MS.gene033498.t1;Parent=MS.gene033498
chr7.3 exon 27096186 27096252 27096186 ID=MS.gene033498.t1.exon1;Parent=MS.gene033498.t1
chr7.3 CDS 27096186 27096252 27096186 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27096050 27096105 27096050 ID=MS.gene033498.t1.exon2;Parent=MS.gene033498.t1
chr7.3 CDS 27096050 27096105 27096050 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27095930 27095963 27095930 ID=MS.gene033498.t1.exon3;Parent=MS.gene033498.t1
chr7.3 CDS 27095930 27095963 27095930 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27095130 27095228 27095130 ID=MS.gene033498.t1.exon4;Parent=MS.gene033498.t1
chr7.3 CDS 27095130 27095228 27095130 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27094898 27095043 27094898 ID=MS.gene033498.t1.exon5;Parent=MS.gene033498.t1
chr7.3 CDS 27094898 27095043 27094898 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27094353 27094391 27094353 ID=MS.gene033498.t1.exon6;Parent=MS.gene033498.t1
chr7.3 CDS 27094353 27094391 27094353 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27094119 27094211 27094119 ID=MS.gene033498.t1.exon7;Parent=MS.gene033498.t1
chr7.3 CDS 27094119 27094211 27094119 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27093644 27093742 27093644 ID=MS.gene033498.t1.exon8;Parent=MS.gene033498.t1
chr7.3 CDS 27093644 27093742 27093644 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27093466 27093552 27093466 ID=MS.gene033498.t1.exon9;Parent=MS.gene033498.t1
chr7.3 CDS 27093466 27093552 27093466 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27092453 27092536 27092453 ID=MS.gene033498.t1.exon10;Parent=MS.gene033498.t1
chr7.3 CDS 27092453 27092536 27092453 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27092253 27092318 27092253 ID=MS.gene033498.t1.exon11;Parent=MS.gene033498.t1
chr7.3 CDS 27092253 27092318 27092253 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
chr7.3 exon 27092066 27092152 27092066 ID=MS.gene033498.t1.exon12;Parent=MS.gene033498.t1
chr7.3 CDS 27092066 27092152 27092066 ID=cds.MS.gene033498.t1;Parent=MS.gene033498.t1
Gene Sequence

>MS.gene033498

ATGTTGGTTCTGTTCCTCTGTATCTTCCTCTTGTTACTCTTCTTATTCAAATTCGCCACCGCCTATGGTATTTTCTCACTCACTTTTTTAATCTCTTTATTTTAACAATTTTTTGGATGCTTATTACTGTTTTGATCAATTTATTAGGTGATTTCACTTTGATGTCAAAGAAGAAACCAAAACATGAACTAATTGAAGATAAGGTTGAATTTCTCATGCTATTGCTATTGATACCAATACCATAATGAAATGATCAAGTTCTTATGTTATTTGTTTCATTTCTTTCCAGGTTTTTTGGATTACTGGTGCCAGTCGTGGAATTGGTATAACAATAACTATAACTATTCATTTCACACTTATATTTCCATAGGATTATTTATATTTCATAATTTAATTCAAATTCACCCACAATGAAATCACTTTCATAAGTCAATCAATCAAAGTAATTAACTTTCGATGAATTTAGTTAGAGACTAGTAAAGAACATGATTTTGAATACGTCTGACAACTTGGTCCTTCTGTTAACTTGTAAAGAGTAGTTTGACTATAAGTGATACAGTTCAAGAACTAATTTCCTAGTAAGTGATATAATTTAGGGACTAATTTGATAGTAAACTAGATGAAAGTTATCAGAAGGGCCAAGTTGCTCGACGTAATTCAAAATTAGTCTCTTTTGTCTCTTCGCAAATTTCAGGGGGTAAGTGCTGGACCCCTACAATTTTAGAGGCAAAATTGGTGATTTATTCAATTTGATTAACCCTTAGGTTCCCTGCTTTATTTTTCTGGTAATGATCATCTTCCCACAAGTGTTTTTGATCAAATTAATCATGCCATGCCATTTAATTCCAGTTTCGGAATCTACTATTTTTTTCCTTTTATTTGATTTTAGGGCTTTTTTTATCCTTAAACTATCCTCTACCAATGATTTCTTTGCAAAGCCAGAATCTTTTCATTATTTGTAGTTTTTTCGTGTGACTTATTTCTTTTGTTGTTTAATTACCCTCATCAATGAATGTATATGAAGGGGAAATTCTAGCTCAACAACTTGCAAGTTTAGGGGCCAAGTTAATACTATCTGCAAGGGATGAAGCTGACCTAAACCGAGTAAAGTCGCAGCTAAAAGGTACGATAAATCCGTTACTCATTTATATCTGTGAACAGATATGGACACTTGCCTTATCCATTAATGTGTGATTTGCATACCACCAGGTAAGCATGCTGACGAGGCCAAGATTTTACCGTTGGATTTAACATCTGGTGAAGATTCTCTTAGGAAGGTTGTCGATGAAGCAGAATCCCTTTTCCCAGATTCTGGGGTTGATTATATGATTCATAATGCTGCTTATGAGCGTCCTGTAAGTGGTTGATTGCTTTATCTAATGGTTATATTGAACATATCAGAATTTGCATGGAAAACAAAACCTACATATGCTTGTTATATCAGAAGACACGCCTATAAACGTAAAACAAGAGGGGGCAAATAGACTTACTGTGTCCTCTTTTTGAGATACTATGTGTGTGTGTGTGTCATTTGTTTATATCTGTAGGTTTATATATTTTTCTGTCAGTGTTTAGTTACAATTCTAAAATAGTGCAATAACTTCAGACACATTTTGATGGGTGTGCTTGCATGCTGGTGTATTTGTAGCATATTAGCAATTACATTTACTAATTGAACACTAGAATCAAGAAAGTGGCATGACATGCTTGCATATTTACACGCCATAATGATATAAGGATGATGATTTGTGAGGGTTGATGAAATTTCTCTTTAATAATAATGTTAACTAGTCTTTATTCTTTATGTTTTACATACTTCTTTAATTAAACATCTTATGAAAATAGTTATTTTGTTTTGCAGAAATCATCCGTCTTAGATGTAACCGAGGAGAGTCTCAAGGTATTTCATGAATGTGACTCTTGGTTTTGCTGATTAATTACCAAAGCTTTAAAAAATGTTCCCCTCCCCGCTTTTAGTTTTCTTTCAAAACATTGAAAGCTGTCTTCTGAAATTCTGCATTACTCCTTTTCTCCTGATTAGGCAACATTTGATGTCAATGTTTTTGGGACAATAACTCTTACAAGGCTCCTGACACCTTTCATGTTGAGGAGGGGCAAAGGTCATTTTGTGGTGGTATGTGGGTTATTCTTTGATAATCTCTTATTTTGGTTATGGAATCTGCGTAGCAAAATTATGTTATGTGGTTAGAAAATACATCATTATTGTGGAGCTTGCAGCAAGATGTTTGTGACTGCAAGGAAAAAGTATAGAGTAGTCACTTGTTAGCTTTTCAACTACACTATATACTTGAACGGATAATAATAATTTTAAATGTTCGGATATAATATATTTGTCACATGTTTTATGTCTTGTGTGCCATAGCTTCTGGCTATGCTAAGCCAATAACTAATATGTTTTATTGTCACATGTTCATTAGATATTTCTCTGAAGTTTTAACCCCATTTCCTGTTTATAAATGTATAATATTCTGTTCTATGTTTACTATCAGATGAGTAGTGCAGCAGGAAAGACACCTGCCCCAGGTCAGGCTGTATACTCAGCTTCAAAATATGCACTAAATGGGTACTTCCATTCCTTGCGTTCAGAGGTATAAAGTTAGTTTTATGTTTGATGTTGTTTTATTCTAATTATCATCATACAGTACATATCATGCACCGCTAATTTTTTTATGGTTGCAGCTCTGTCAGAAAGGAATCCAGGTAACTGTTGTCTGTCCCGGTCCCATAGAAACAGCAAATAACTCTGGATCGCAGGTTCCATCTGAGGTATGCACCTTTGCCAACTAAGCATCCATTGTTAGTGTAAAGAAAGACAGTACTTGAGTCTATCTGTTTTAACTCTACTTTATTTCCACCATGCAAGTATCTTCATTAACTTCTTATCCACTGAGATTGCTAAATCAAGATACACGACAATTTTCCAAGTTTATGTATACTACATGTTTTGAAGGTTGAGAGTGCTAAATCAATATACATCTCTGTTTTCCAAGTTTATGTTTACATGTTTTACAATAATGAAGATATTTGTTGTCATTGTATTTCTAAGTTTATGTTTACATGTGTATAGTTTTACTTCACATTTTTTCTTTTGAAATAGTAGGTATGCACGGGATTATTATTTTAAACTATGAATATGGCTTGCTAATCTAATATCATGTTTGCTAAATGAAAACAACTAAGAATATGCATATGCAAGTGCAACAATAACAAAAAGTCTTTTTCCACTTTGTGGATTCAGGCTGCTTGAATCAAACAATATCATAATGTCTTGTCGTAAATCATATTTATTGATAAACCATTTAATTTAAACCATTCTTAATGCTCTGGCCCAGAGTTTTTCTATTGGAAAACCCTTCATATGATCTACACTTCTTATCGGAACTTCTATAAGTCCACACTGTAAATAGCCGTTTTTTATAATAGGTATTACTCAACTTTCTCTTCACTGCAATCATTTGTAGTCCTATCTTGTCTTCTGTCTTGAAACATGGTCAACACTGAATAAAAATGAATTATAGATTGAAGAGAAGCGCAAGCAAGGTCTTAGACCTGGAATTTACAGTATAAACTTTCCCTTTATGTTCTAGCTTGTTTGTTAGCTTCCACTTGAATGTGTGTCGTGCGGTGTTTTTGCTGATTGCATCATCTGAACCATTGAAGTTTGTTCTTTCCCTTTTAAAATTATGTCTTGACAGAAGCGTGTGTCAGCGGAGAAGTGTGTTGAGCTGACGATTATTGCCGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAGGTAAAAAAATTGTATTAGGCTATTAGAAATCTATTTCTGTTAGAATACTGCACCAGTTTTCAACTTTTGTGCCTTATTAGTTTAGTAATATTTGTTCACTCAATCGGCAATACTGAACTCTTTTTCGTTTGCAGCCTGTGCTTGCTGTCATGTATCTTGTTCAATACATGCCAACTATTGGTTTTTGGCTCATGGACAAGGTATTGTTTTCCATCTTTTATATGCATTATGTCTGTCTTTATGAAGACATTTGATTTTTGTTACAATACTAATTAATGACTTTATATAAATGACTGGTAGGTTGGTAAAAATCGAGTGGAGGCTGCTAAAGAGAAGGGAAACGCATATTCTTTGAGCCTGCTATTTGGGAAAAAGAAGGCAGTGTGA
Protein sequence

>MS.gene033498.t1

MLVLFLCIFLLLLFLFKFATAYGDFTLMSKKKPKHELIEDKVFWITGASRGIGEILAQQLASLGAKLILSARDEADLNRVKSQLKGKHADEAKILPLDLTSGEDSLRKVVDEAESLFPDSGVDYMIHNAAYERPKSSVLDVTEESLKATFDVNVFGTITLTRLLTPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELCQKGIQVTVVCPGPIETANNSGSQVPSEKRVSAEKCVELTIIAATHGLKEAWISYQPVLAVMYLVQYMPTIGFWLMDKVGKNRVEAAKEKGNAYSLSLLFGKKKAV