Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033531.t1 | XP_013449384.1 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 1.20E-59 | 238.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033531.t1 | P62772 | 93.7 | 111 | 7 | 0 | 2 | 112 | 1 | 111 | 2.2e-57 | 222.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033531.t1 | A2Q5X9 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 8.8e-60 | 238.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55486 | MS.gene033531 | PPI |
| MS.gene47121 | MS.gene033531 | PPI |
| MS.gene074110 | MS.gene033531 | PPI |
| MS.gene47123 | MS.gene033531 | PPI |
| MS.gene55480 | MS.gene033531 | PPI |
| MS.gene074111 | MS.gene033531 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033531.t1 | MTR_7g080803 | 99.115 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 8.96e-82 | 234 |
| MS.gene033531.t1 | MTR_5g008460 | 88.496 | 113 | 13 | 0 | 1 | 113 | 1 | 113 | 2.16e-73 | 213 |
| MS.gene033531.t1 | MTR_7g080793 | 70.370 | 108 | 31 | 1 | 1 | 108 | 1 | 107 | 1.56e-51 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033531.t1 | AT4G10040 | 91.071 | 112 | 10 | 0 | 1 | 112 | 1 | 112 | 4.39e-75 | 218 |
| MS.gene033531.t1 | AT1G22840 | 89.286 | 112 | 12 | 0 | 1 | 112 | 1 | 112 | 2.07e-73 | 213 |
| MS.gene033531.t1 | AT1G22840 | 88.095 | 84 | 10 | 0 | 1 | 84 | 1 | 84 | 4.53e-52 | 159 |
Find 43 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGCCGGCGGCGGGGTTTC+CGG | 0.164134 | 7.3:+26613967 | None:intergenic |
| TCGCCGGCGGCGGGGTTTCC+GGG | 0.240370 | 7.3:+26613968 | None:intergenic |
| CCCAATCTGAATGGTTTGTT+TGG | 0.305862 | 7.3:-26612471 | MS.gene033531:CDS |
| ATCAATGAGGTGTACCTTCT+TGG | 0.316265 | 7.3:+26612347 | None:intergenic |
| GGTTTGTTTGGAAGGCAATC+TGG | 0.326375 | 7.3:-26612459 | MS.gene033531:CDS |
| AAGATCTTCTCGCCGGCGGC+GGG | 0.329325 | 7.3:+26613959 | None:intergenic |
| TCAATGAGGTGTACCTTCTT+GGG | 0.342267 | 7.3:+26612348 | None:intergenic |
| CAAGAACAAGGCTGTGGATT+GGG | 0.392913 | 7.3:-26612403 | MS.gene033531:CDS |
| GAAGATCTTCTCGCCGGCGG+CGG | 0.418146 | 7.3:+26613958 | None:intergenic |
| TCCAAACAAACCATTCAGAT+TGG | 0.424075 | 7.3:+26612470 | None:intergenic |
| ATCTGAATGGTTTGTTTGGA+AGG | 0.441498 | 7.3:-26612467 | MS.gene033531:CDS |
| AGGCAATCTGGGACAACTCC+TGG | 0.447271 | 7.3:-26612447 | MS.gene033531:CDS |
| ATCTTAATGCAGTACATCCC+AGG | 0.460110 | 7.3:-26612107 | MS.gene033531:intron |
| GTTTGTTTGGAAGGCAATCT+GGG | 0.482470 | 7.3:-26612458 | MS.gene033531:CDS |
| CCAAACAAACCATTCAGATT+GGG | 0.484079 | 7.3:+26612471 | None:intergenic |
| AGAATAGTAAACCTTGTTTG+TGG | 0.491881 | 7.3:+26613891 | None:intergenic |
| ACCTTAGGACCCAATCTGAA+TGG | 0.493293 | 7.3:-26612480 | MS.gene033531:intron |
| TCCTTCGATGAAGCTCCTCC+CGG | 0.495242 | 7.3:-26613986 | MS.gene033531:CDS |
| ACAAGAACAAGGCTGTGGAT+TGG | 0.503827 | 7.3:-26612404 | MS.gene033531:CDS |
| TAGTAAACCTTGTTTGTGGC+CGG | 0.509984 | 7.3:+26613895 | None:intergenic |
| GTGGCCGGCGCCTTTGTCGA+CGG | 0.510944 | 7.3:+26613910 | None:intergenic |
| GGTGTGGCACTGAGCGCACT+TGG | 0.520968 | 7.3:+26613931 | None:intergenic |
| GCTGCAGAGTAGGAATATCC+AGG | 0.542193 | 7.3:+26612429 | None:intergenic |
| TCTTGAGGCTTCTTAAGACC+AGG | 0.550991 | 7.3:+26612068 | None:intergenic |
| CCTCCCGGAAACCCCGCCGC+CGG | 0.551439 | 7.3:-26613971 | MS.gene033531:CDS |
| AGATCTTCTCGCCGGCGGCG+GGG | 0.553653 | 7.3:+26613960 | None:intergenic |
| GTTCTTGTTAGCTGCAGAGT+AGG | 0.557927 | 7.3:+26612419 | None:intergenic |
| CAATGAGGTGTACCTTCTTG+GGG | 0.580286 | 7.3:+26612349 | None:intergenic |
| CAGTGCCACACCGTCGACAA+AGG | 0.583975 | 7.3:-26613920 | MS.gene033531:CDS |
| ATAAGATCAGCACGTTCTTG+AGG | 0.588809 | 7.3:+26612053 | None:intergenic |
| GTACATCCCAGGGACGAAGA+TGG | 0.591227 | 7.3:-26612096 | MS.gene033531:CDS |
| TTTGAAGATCTTCTCGCCGG+CGG | 0.594334 | 7.3:+26613955 | None:intergenic |
| TCCGGGAGGAGCTTCATCGA+AGG | 0.600967 | 7.3:+26613985 | None:intergenic |
| AAAGGCGCCGGCCACAAACA+AGG | 0.601379 | 7.3:-26613902 | MS.gene033531:intron |
| CTCTGCAGCTAACAAGAACA+AGG | 0.605687 | 7.3:-26612415 | MS.gene033531:CDS |
| AGCTAACAAGAACAAGGCTG+TGG | 0.608122 | 7.3:-26612409 | MS.gene033531:CDS |
| TCTTAATGCAGTACATCCCA+GGG | 0.608747 | 7.3:-26612106 | MS.gene033531:intron |
| CACACCGTCGACAAAGGCGC+CGG | 0.616193 | 7.3:-26613914 | MS.gene033531:CDS |
| GTTCAGCAAGTAATCGTACA+AGG | 0.624998 | 7.3:+26612371 | None:intergenic |
| GAACAAGGCTGTGGATTGGG+AGG | 0.635538 | 7.3:-26612400 | MS.gene033531:CDS |
| TTACTTGCTGAACCCCAAGA+AGG | 0.638569 | 7.3:-26612361 | MS.gene033531:intron |
| CGGCGCCTTTGTCGACGGTG+TGG | 0.644445 | 7.3:+26613915 | None:intergenic |
| CCGGCGGCGGGGTTTCCGGG+AGG | 0.653806 | 7.3:+26613971 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATATTTACATAGTTTA+GGG | - | chr7.3:26612818-26612837 | MS.gene033531:intron | 10.0% |
| !! | TTATTATATTTACATAGTTT+AGG | - | chr7.3:26612817-26612836 | MS.gene033531:intron | 10.0% |
| !!! | TTTTTTATATATTTATTGCA+AGG | - | chr7.3:26613097-26613116 | MS.gene033531:intron | 10.0% |
| !! | ACAATTATTGAAATAACATT+GGG | + | chr7.3:26613179-26613198 | None:intergenic | 15.0% |
| !! | ATAAAAATGTCTATATCAAA+TGG | - | chr7.3:26613719-26613738 | MS.gene033531:intron | 15.0% |
| !! | CATATGTGAAAAATATTAAA+CGG | + | chr7.3:26613352-26613371 | None:intergenic | 15.0% |
| !! | TAAATATAATAAGTAATCTG+AGG | + | chr7.3:26612809-26612828 | None:intergenic | 15.0% |
| !! | TACAATTATTGAAATAACAT+TGG | + | chr7.3:26613180-26613199 | None:intergenic | 15.0% |
| !! | ATTTGATCTCTAAATATCTT+GGG | - | chr7.3:26612576-26612595 | MS.gene033531:intron | 20.0% |
| !! | CAATTATTGAAATAACATTG+GGG | + | chr7.3:26613178-26613197 | None:intergenic | 20.0% |
| !! | GTTATGCTGTTAATTTATTA+TGG | - | chr7.3:26613815-26613834 | MS.gene033531:intron | 20.0% |
| !! | TTACAAAATGACATTATTCA+AGG | + | chr7.3:26613476-26613495 | None:intergenic | 20.0% |
| !!! | AAATGAATAAACCATTGATT+TGG | + | chr7.3:26612845-26612864 | None:intergenic | 20.0% |
| !!! | ATGAAAATGTTTTGTAAACT+TGG | - | chr7.3:26612902-26612921 | MS.gene033531:intron | 20.0% |
| ! | AAAAAACGAAAAAACATCAC+AGG | + | chr7.3:26612190-26612209 | None:intergenic | 25.0% |
| ! | AATCCGTAAACTATAGAAAT+CGG | - | chr7.3:26612532-26612551 | MS.gene033531:intron | 25.0% |
| ! | ACCTTAATACTTATGTAAGT+TGG | + | chr7.3:26612432-26612451 | None:intergenic | 25.0% |
| ! | CATTTGATCTCTAAATATCT+TGG | - | chr7.3:26612575-26612594 | MS.gene033531:intron | 25.0% |
| ! | TAAGAATCTATTGTATTGTG+TGG | - | chr7.3:26612306-26612325 | MS.gene033531:intron | 25.0% |
| ! | TCCAACTTACATAAGTATTA+AGG | - | chr7.3:26612428-26612447 | MS.gene033531:CDS | 25.0% |
| ! | TGAATGAATTGTGATTAGAA+AGG | - | chr7.3:26613231-26613250 | MS.gene033531:intron | 25.0% |
| ! | TTGTGAAAAAAACCAAAAGA+TGG | + | chr7.3:26613014-26613033 | None:intergenic | 25.0% |
| !! | AATACTTATGTAAGTTGGAT+CGG | + | chr7.3:26612427-26612446 | None:intergenic | 25.0% |
| !! | CATTTAGTGTTTTCTACAAT+TGG | - | chr7.3:26613786-26613805 | MS.gene033531:intron | 25.0% |
| !!! | ATCTTTTGGTTTTTTTCACA+AGG | - | chr7.3:26613013-26613032 | MS.gene033531:intron | 25.0% |
| !!! | ATTATGGTTATGTTGATGAT+AGG | - | chr7.3:26613831-26613850 | MS.gene033531:intron | 25.0% |
| AAATGACATTATTCAAGGAG+AGG | + | chr7.3:26613471-26613490 | None:intergenic | 30.0% | |
| AATGACATTATTCAAGGAGA+GGG | + | chr7.3:26613470-26613489 | None:intergenic | 30.0% | |
| ACGCATATCAGTAAAATACT+TGG | + | chr7.3:26613879-26613898 | None:intergenic | 30.0% | |
| ACTCAGCTAAAAAAACAAGA+AGG | + | chr7.3:26613291-26613310 | None:intergenic | 30.0% | |
| ACTCCGATTTCTATAGTTTA+CGG | + | chr7.3:26612538-26612557 | None:intergenic | 30.0% | |
| GAAAAAACTTAACAGCGATT+AGG | + | chr7.3:26612244-26612263 | None:intergenic | 30.0% | |
| GATTGTTCAAGATCTTGTTA+GGG | - | chr7.3:26612281-26612300 | MS.gene033531:intron | 30.0% | |
| GTTGAATGAACAAAACTCAA+GGG | - | chr7.3:26613313-26613332 | MS.gene033531:intron | 30.0% | |
| TGATTGTTCAAGATCTTGTT+AGG | - | chr7.3:26612280-26612299 | MS.gene033531:intron | 30.0% | |
| TGTTGAAGCTTGAAATGTTT+AGG | - | chr7.3:26612338-26612357 | MS.gene033531:intron | 30.0% | |
| ! | AGAATAGTAAACCTTGTTTG+TGG | + | chr7.3:26612126-26612145 | None:intergenic | 30.0% |
| ! | TAGTGTTTTCTACAATTGGT+AGG | - | chr7.3:26613790-26613809 | MS.gene033531:intron | 30.0% |
| !!! | TCTTGTTTTTTTAGCTGAGT+CGG | - | chr7.3:26613291-26613310 | MS.gene033531:intron | 30.0% |
| ATCTCAGCCATTAAGAGATT+AGG | + | chr7.3:26612622-26612641 | None:intergenic | 35.0% | |
| CAACACTTTACACTGAATAG+TGG | - | chr7.3:26612729-26612748 | MS.gene033531:intron | 35.0% | |
| CCAAACAAACCATTCAGATT+GGG | + | chr7.3:26613546-26613565 | None:intergenic | 35.0% | |
| CTTGGTATGTTCAGAATGTT+TGG | - | chr7.3:26612920-26612939 | MS.gene033531:intron | 35.0% | |
| GAAATAACATTGGGGTGATA+TGG | + | chr7.3:26613170-26613189 | None:intergenic | 35.0% | |
| GGTTGAATGAACAAAACTCA+AGG | - | chr7.3:26613312-26613331 | MS.gene033531:intron | 35.0% | |
| TAGTTTAGGGACCAAATCAA+TGG | - | chr7.3:26612831-26612850 | MS.gene033531:intron | 35.0% | |
| TCCAAACAAACCATTCAGAT+TGG | + | chr7.3:26613547-26613566 | None:intergenic | 35.0% | |
| TCTCAGCCATTAAGAGATTA+GGG | + | chr7.3:26612621-26612640 | None:intergenic | 35.0% | |
| TTAAACAGCGTTGTCAATCT+TGG | - | chr7.3:26612641-26612660 | MS.gene033531:intron | 35.0% | |
| TTGGTTCCCTAATCTCTTAA+TGG | - | chr7.3:26612612-26612631 | MS.gene033531:intron | 35.0% | |
| TTGGTTGAAACAGACTTTCA+AGG | + | chr7.3:26613860-26613879 | None:intergenic | 35.0% | |
| TTGTCAAAAAGCCTCTATTG+CGG | + | chr7.3:26612712-26612731 | None:intergenic | 35.0% | |
| ! | TGTTTTCTACAATTGGTAGG+AGG | - | chr7.3:26613793-26613812 | MS.gene033531:intron | 35.0% |
| !! | ATCTGAATGGTTTGTTTGGA+AGG | - | chr7.3:26613547-26613566 | MS.gene033531:intron | 35.0% |
| !! | CGTAGATCTGAGAGTATTAA+GGG | + | chr7.3:26612164-26612183 | None:intergenic | 35.0% |
| !!! | GTTTTGTTTGAGAGATGAGA+GGG | - | chr7.3:26612981-26613000 | MS.gene033531:intron | 35.0% |
| ATAAGATCAGCACGTTCTTG+AGG | + | chr7.3:26613964-26613983 | None:intergenic | 40.0% | |
| ATCAATGAGGTGTACCTTCT+TGG | + | chr7.3:26613670-26613689 | None:intergenic | 40.0% | |
| ATCTTAATGCAGTACATCCC+AGG | - | chr7.3:26613907-26613926 | MS.gene033531:CDS | 40.0% | |
| CACAGAAATGCCAATCAATG+AGG | + | chr7.3:26613683-26613702 | None:intergenic | 40.0% | |
| GGATCGGACATAACTGAAAT+TGG | + | chr7.3:26612411-26612430 | None:intergenic | 40.0% | |
| GTTCAGCAAGTAATCGTACA+AGG | + | chr7.3:26613646-26613665 | None:intergenic | 40.0% | |
| GTTTGTTTGGAAGGCAATCT+GGG | - | chr7.3:26613556-26613575 | MS.gene033531:intron | 40.0% | |
| TCAATGAGGTGTACCTTCTT+GGG | + | chr7.3:26613669-26613688 | None:intergenic | 40.0% | |
| TCTTAATGCAGTACATCCCA+GGG | - | chr7.3:26613908-26613927 | MS.gene033531:CDS | 40.0% | |
| ! | AGAAGGTACACCTCATTGAT+TGG | - | chr7.3:26613670-26613689 | MS.gene033531:intron | 40.0% |
| ! | CAGAATGTTTGGTTCAAACC+AGG | - | chr7.3:26612931-26612950 | MS.gene033531:intron | 40.0% |
| ! | CTTGGGCTTAAATGCACTTT+TGG | - | chr7.3:26612593-26612612 | MS.gene033531:intron | 40.0% |
| ! | CTTTATTTGTTGCCGACCTT+AGG | - | chr7.3:26613519-26613538 | MS.gene033531:intron | 40.0% |
| ! | TAGTAAACCTTGTTTGTGGC+CGG | + | chr7.3:26612122-26612141 | None:intergenic | 40.0% |
| !! | CCCAATCTGAATGGTTTGTT+TGG | - | chr7.3:26613543-26613562 | MS.gene033531:intron | 40.0% |
| !! | GCGTAGATCTGAGAGTATTA+AGG | + | chr7.3:26612165-26612184 | None:intergenic | 40.0% |
| !!! | CGTTTTGTTTGAGAGATGAG+AGG | - | chr7.3:26612980-26612999 | MS.gene033531:intron | 40.0% |
| !!! | GGTTTTTTTCACAAGGAGAG+AGG | - | chr7.3:26613020-26613039 | MS.gene033531:intron | 40.0% |
| ACAAGAACAAGGCTGTGGAT+TGG | - | chr7.3:26613610-26613629 | MS.gene033531:intron | 45.0% | |
| ACCATTCAGATTGGGTCCTA+AGG | + | chr7.3:26613538-26613557 | None:intergenic | 45.0% | |
| ACCTTAGGACCCAATCTGAA+TGG | - | chr7.3:26613534-26613553 | MS.gene033531:intron | 45.0% | |
| AGCTAACAAGAACAAGGCTG+TGG | - | chr7.3:26613605-26613624 | MS.gene033531:intron | 45.0% | |
| CAAGAACAAGGCTGTGGATT+GGG | - | chr7.3:26613611-26613630 | MS.gene033531:intron | 45.0% | |
| CAATGAGGTGTACCTTCTTG+GGG | + | chr7.3:26613668-26613687 | None:intergenic | 45.0% | |
| CTCTGCAGCTAACAAGAACA+AGG | - | chr7.3:26613599-26613618 | MS.gene033531:intron | 45.0% | |
| GAAAAACCATCTTCGTCCCT+GGG | + | chr7.3:26613927-26613946 | None:intergenic | 45.0% | |
| GTTCTTGTTAGCTGCAGAGT+AGG | + | chr7.3:26613598-26613617 | None:intergenic | 45.0% | |
| TCTTGAGGCTTCTTAAGACC+AGG | + | chr7.3:26613949-26613968 | None:intergenic | 45.0% | |
| TTCAGATTGGGTCCTAAGGT+CGG | + | chr7.3:26613534-26613553 | None:intergenic | 45.0% | |
| ! | ATTATTCAAGGAGAGGGCAC+AGG | + | chr7.3:26613464-26613483 | None:intergenic | 45.0% |
| ! | GAGGGCAAACAACCATCTTT+TGG | - | chr7.3:26612999-26613018 | MS.gene033531:intron | 45.0% |
| ! | GGTTTGTTTGGAAGGCAATC+TGG | - | chr7.3:26613555-26613574 | MS.gene033531:intron | 45.0% |
| ! | TGTTTGGTTCAAACCAGGCA+AGG | - | chr7.3:26612936-26612955 | MS.gene033531:intron | 45.0% |
| ! | TTACTTGCTGAACCCCAAGA+AGG | - | chr7.3:26613653-26613672 | MS.gene033531:intron | 45.0% |
| !!! | GGTTTTGAAGATCTTCTCGC+CGG | + | chr7.3:26612065-26612084 | None:intergenic | 45.0% |
| !!! | TTTTTAAAAAATATATTGTA+AGG | - | chr7.3:26612862-26612881 | MS.gene033531:intron | 5.0% |
| CTGTTACAGTGCCGCAATAG+AGG | - | chr7.3:26612698-26612717 | MS.gene033531:intron | 50.0% | |
| GCGTTGTCAATCTTGGATCG+TGG | - | chr7.3:26612648-26612667 | MS.gene033531:intron | 50.0% | |
| GCTGCAGAGTAGGAATATCC+AGG | + | chr7.3:26613588-26613607 | None:intergenic | 50.0% | |
| GGAAAAACCATCTTCGTCCC+TGG | + | chr7.3:26613928-26613947 | None:intergenic | 50.0% | |
| GTTCAAACCAGGCAAGGAGA+GGG | - | chr7.3:26612942-26612961 | MS.gene033531:intron | 50.0% | |
| TTTGAAGATCTTCTCGCCGG+CGG | + | chr7.3:26612062-26612081 | None:intergenic | 50.0% | |
| ! | GGGACGAAGATGGTTTTTCC+TGG | - | chr7.3:26613928-26613947 | MS.gene033531:CDS | 50.0% |
| GGTTCAAACCAGGCAAGGAG+AGG | - | chr7.3:26612941-26612960 | MS.gene033531:intron | 55.0% | |
| GTACATCCCAGGGACGAAGA+TGG | - | chr7.3:26613918-26613937 | MS.gene033531:CDS | 55.0% | |
| TCCTTCGATGAAGCTCCTCC+CGG | - | chr7.3:26612028-26612047 | MS.gene033531:CDS | 55.0% | |
| ! | AGGCAATCTGGGACAACTCC+TGG | - | chr7.3:26613567-26613586 | MS.gene033531:intron | 55.0% |
| !! | GAACAAGGCTGTGGATTGGG+AGG | - | chr7.3:26613614-26613633 | MS.gene033531:intron | 55.0% |
| ACCAGAACCCTCTCCTTGCC+TGG | + | chr7.3:26612952-26612971 | None:intergenic | 60.0% | |
| ACCAGGCAAGGAGAGGGTTC+TGG | - | chr7.3:26612948-26612967 | MS.gene033531:intron | 60.0% | |
| CAGTGCCACACCGTCGACAA+AGG | - | chr7.3:26612094-26612113 | MS.gene033531:CDS | 60.0% | |
| TCCGGGAGGAGCTTCATCGA+AGG | + | chr7.3:26612032-26612051 | None:intergenic | 60.0% | |
| !! | AAAGGCGCCGGCCACAAACA+AGG | - | chr7.3:26612112-26612131 | MS.gene033531:intron | 60.0% |
| AAGATCTTCTCGCCGGCGGC+GGG | + | chr7.3:26612058-26612077 | None:intergenic | 65.0% | |
| GAAGATCTTCTCGCCGGCGG+CGG | + | chr7.3:26612059-26612078 | None:intergenic | 65.0% | |
| ! | CACACCGTCGACAAAGGCGC+CGG | - | chr7.3:26612100-26612119 | MS.gene033531:intron | 65.0% |
| ! | GGTGTGGCACTGAGCGCACT+TGG | + | chr7.3:26612086-26612105 | None:intergenic | 65.0% |
| AGATCTTCTCGCCGGCGGCG+GGG | + | chr7.3:26612057-26612076 | None:intergenic | 70.0% | |
| CGGCGCCTTTGTCGACGGTG+TGG | + | chr7.3:26612102-26612121 | None:intergenic | 70.0% | |
| GTGGCCGGCGCCTTTGTCGA+CGG | + | chr7.3:26612107-26612126 | None:intergenic | 70.0% | |
| ! | CCTCCCGGAAACCCCGCCGC+CGG | - | chr7.3:26612043-26612062 | MS.gene033531:CDS | 80.0% |
| ! | CTCGCCGGCGGCGGGGTTTC+CGG | + | chr7.3:26612050-26612069 | None:intergenic | 80.0% |
| ! | TCGCCGGCGGCGGGGTTTCC+GGG | + | chr7.3:26612049-26612068 | None:intergenic | 80.0% |
| ! | CCGGCGGCGGGGTTTCCGGG+AGG | + | chr7.3:26612046-26612065 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 26612022 | 26614014 | 26612022 | ID=MS.gene033531 |
| chr7.3 | mRNA | 26612022 | 26614014 | 26612022 | ID=MS.gene033531.t1;Parent=MS.gene033531 |
| chr7.3 | exon | 26613903 | 26614014 | 26613903 | ID=MS.gene033531.t1.exon1;Parent=MS.gene033531.t1 |
| chr7.3 | CDS | 26613903 | 26614014 | 26613903 | ID=cds.MS.gene033531.t1;Parent=MS.gene033531.t1 |
| chr7.3 | exon | 26612362 | 26612495 | 26612362 | ID=MS.gene033531.t1.exon2;Parent=MS.gene033531.t1 |
| chr7.3 | CDS | 26612362 | 26612495 | 26612362 | ID=cds.MS.gene033531.t1;Parent=MS.gene033531.t1 |
| chr7.3 | exon | 26612022 | 26612117 | 26612022 | ID=MS.gene033531.t1.exon3;Parent=MS.gene033531.t1 |
| chr7.3 | CDS | 26612022 | 26612117 | 26612022 | ID=cds.MS.gene033531.t1;Parent=MS.gene033531.t1 |
| Gene Sequence |
| Protein sequence |
