Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47123.t1 | XP_003618813.1 | 98 | 307 | 6 | 0 | 1 | 307 | 1 | 307 | 7.40E-168 | 599.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47123.t1 | Q9FKS5 | 85.4 | 309 | 40 | 2 | 1 | 307 | 2 | 307 | 1.2e-147 | 523.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47123.t1 | G7KN99 | 98.0 | 307 | 6 | 0 | 1 | 307 | 1 | 307 | 5.3e-168 | 599.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47123 | MS.gene55480 | PPI |
| MS.gene47123 | MS.gene000289 | PPI |
| MS.gene47123 | MS.gene074110 | PPI |
| MS.gene074110 | MS.gene47123 | PPI |
| MS.gene47123 | MS.gene074111 | PPI |
| MS.gene47123 | MS.gene033723 | PPI |
| MS.gene47123 | MS.gene52332 | PPI |
| MS.gene47123 | MS.gene55486 | PPI |
| MS.gene47123 | MS.gene73382 | PPI |
| MS.gene47123 | MS.gene058150 | PPI |
| MS.gene47123 | MS.gene47121 | PPI |
| MS.gene47123 | MS.gene21707 | PPI |
| MS.gene47123 | MS.gene024087 | PPI |
| MS.gene47123 | MS.gene039438 | PPI |
| MS.gene47123 | MS.gene21918 | PPI |
| MS.gene47123 | MS.gene024731 | PPI |
| MS.gene47123 | MS.gene033531 | PPI |
| MS.gene47123 | MS.gene024287 | PPI |
| MS.gene47123 | MS.gene058545 | PPI |
| MS.gene47123 | MS.gene52274 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47123.t1 | MTR_6g023290 | 98.046 | 307 | 6 | 0 | 1 | 307 | 1 | 307 | 0.0 | 623 |
| MS.gene47123.t1 | MTR_6g023230 | 94.137 | 307 | 17 | 1 | 1 | 307 | 1 | 306 | 0.0 | 570 |
| MS.gene47123.t1 | MTR_6g023280 | 80.702 | 57 | 11 | 0 | 132 | 188 | 2 | 58 | 1.24e-27 | 102 |
| MS.gene47123.t1 | MTR_6g023270 | 54.867 | 113 | 28 | 2 | 22 | 117 | 35 | 141 | 7.00e-25 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47123.t1 | AT5G40810 | 85.437 | 309 | 40 | 2 | 1 | 307 | 2 | 307 | 2.52e-180 | 499 |
| MS.gene47123.t1 | AT3G27240 | 84.691 | 307 | 46 | 1 | 1 | 307 | 2 | 307 | 5.54e-178 | 494 |
| MS.gene47123.t1 | AT5G40810 | 92.692 | 260 | 19 | 0 | 48 | 307 | 1 | 260 | 7.55e-169 | 469 |
Find 72 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCGGTGTCTCAGGTCTTC+TGG | 0.159209 | 6.3:-16560672 | MS.gene47123:CDS |
| TTTAGAGCCCTTGCATTAAT+TGG | 0.177750 | 6.3:-16560695 | MS.gene47123:CDS |
| GCAGCTGATTCATTTGAATA+TGG | 0.283236 | 6.3:+16558898 | None:intergenic |
| ACATGCAGATGGGATTTAAA+TGG | 0.308838 | 6.3:-16557928 | MS.gene47123:intron |
| ATGGATATTTGTACTTTCAT+TGG | 0.329694 | 6.3:-16557909 | MS.gene47123:CDS |
| TACGTGTTTGCTCTTCTTAC+CGG | 0.338041 | 6.3:-16558725 | MS.gene47123:CDS |
| ATGGCTCCACCAGGAAAATA+AGG | 0.345219 | 6.3:+16558284 | None:intergenic |
| GCCGGTGTCTCAGGTCTTCT+GGG | 0.347660 | 6.3:-16560671 | MS.gene47123:CDS |
| AACATCTCACCCTCATCATT+AGG | 0.353144 | 6.3:+16558958 | None:intergenic |
| ACATCTCACCCTCATCATTA+GGG | 0.410164 | 6.3:+16558959 | None:intergenic |
| TTTGATATCATACCGTGATT+TGG | 0.414012 | 6.3:-16559046 | MS.gene47123:CDS |
| TTAATTGGAGCCGGTGTCTC+AGG | 0.434031 | 6.3:-16560680 | MS.gene47123:CDS |
| AGTACCTGAGCTTCGGTAGC+AGG | 0.443562 | 6.3:+16558209 | None:intergenic |
| AATTAATGCAAGGGCTCTAA+AGG | 0.447468 | 6.3:+16560697 | None:intergenic |
| TGCTTACAGGAGAATGAGAT+TGG | 0.447474 | 6.3:+16562477 | None:intergenic |
| TGAGATGGAAGAGAGAAAAC+TGG | 0.457119 | 6.3:-16558033 | MS.gene47123:intron |
| GCTGAGATTGAGGTAGTTGA+TGG | 0.477779 | 6.3:-16558982 | MS.gene47123:CDS |
| TGATGAAGCTGAGCATGGCC+TGG | 0.478869 | 6.3:-16560627 | MS.gene47123:CDS |
| TCAGCTGCTAGATTTGCTAA+TGG | 0.481738 | 6.3:-16558883 | MS.gene47123:CDS |
| CTGCGTATTATCGTCGCCTT+CGG | 0.482490 | 6.3:-16557874 | MS.gene47123:CDS |
| TCGTGCGGCCATGGATAGCT+TGG | 0.494142 | 6.3:+16560599 | None:intergenic |
| GAATTTACCACAACACCAGC+AGG | 0.497215 | 6.3:+16558689 | None:intergenic |
| TTGGGCTGCGGAACCTGAGA+TGG | 0.499239 | 6.3:-16558048 | MS.gene47123:CDS |
| GCCCTTGCATTAATTGGAGC+CGG | 0.499748 | 6.3:-16560689 | MS.gene47123:CDS |
| ATGGATAGCTTGGAGCAGCC+AGG | 0.501176 | 6.3:+16560609 | None:intergenic |
| GGCAATGGCTGCTGAGATTG+AGG | 0.501430 | 6.3:-16558992 | MS.gene47123:CDS |
| TTGGTGATGAGACTTAGATC+TGG | 0.516519 | 6.3:+16558847 | None:intergenic |
| ACATAAAAGTACCTGAGCTT+CGG | 0.516866 | 6.3:+16558202 | None:intergenic |
| TATCAAAGACATAGAATGAC+AGG | 0.519846 | 6.3:+16559062 | None:intergenic |
| GCCCAGAAGACCTGAGACAC+CGG | 0.525618 | 6.3:+16560670 | None:intergenic |
| AGGATTCCCTCGTGCGGCCA+TGG | 0.526107 | 6.3:+16560590 | None:intergenic |
| TACCCCTGCTACCGAAGCTC+AGG | 0.527300 | 6.3:-16558213 | MS.gene47123:intron |
| GTACCTGAGCTTCGGTAGCA+GGG | 0.529146 | 6.3:+16558210 | None:intergenic |
| TGGCTGCTCCAAGCTATCCA+TGG | 0.529705 | 6.3:-16560607 | MS.gene47123:CDS |
| TCGATAATCACGAAGAATGA+TGG | 0.541883 | 6.3:-16560743 | MS.gene47123:CDS |
| ATTATCGATGACATAGATGA+AGG | 0.546169 | 6.3:+16560758 | None:intergenic |
| GAGACTTAGATCTGGAGGAT+AGG | 0.546551 | 6.3:+16558855 | None:intergenic |
| GATTCATTTGAATATGGCTG+AGG | 0.555903 | 6.3:+16558904 | None:intergenic |
| TGTTCTTAAGTCTCGCAAGT+TGG | 0.563450 | 6.3:-16557846 | MS.gene47123:CDS |
| ATCACGAAGAATGATGGTGC+TGG | 0.570371 | 6.3:-16560737 | MS.gene47123:CDS |
| TTACACAGAAGAGGAGGTAA+AGG | 0.571394 | 6.3:-16559013 | MS.gene47123:CDS |
| GGCATGGCAATGGCTCCACC+AGG | 0.572110 | 6.3:+16558275 | None:intergenic |
| ATTATAATGCAGATTAGAGA+AGG | 0.576313 | 6.3:-16558320 | MS.gene47123:intron |
| AAGCTATCCATGGCCGCACG+AGG | 0.577907 | 6.3:-16560597 | MS.gene47123:CDS |
| ATGCCTAAAATGCTTAATGA+TGG | 0.586270 | 6.3:-16558257 | MS.gene47123:CDS |
| TGGTGTTGCTTACACAGAAG+AGG | 0.586361 | 6.3:-16559022 | MS.gene47123:CDS |
| CACCGGCTCCAATTAATGCA+AGG | 0.586576 | 6.3:+16560687 | None:intergenic |
| CGTATTATCGTCGCCTTCGG+TGG | 0.588747 | 6.3:-16557871 | MS.gene47123:CDS |
| TCAGCTGATGAAGCTGAGCA+TGG | 0.598104 | 6.3:-16560632 | MS.gene47123:CDS |
| CCAGTGTGGATTGAAATGGC+TGG | 0.603984 | 6.3:-16562533 | None:intergenic |
| GTGATGAGACTTAGATCTGG+AGG | 0.607751 | 6.3:+16558850 | None:intergenic |
| ACCGGCTCCAATTAATGCAA+GGG | 0.611438 | 6.3:+16560688 | None:intergenic |
| AGAAGAGGAGGTAAAGGCAA+TGG | 0.614386 | 6.3:-16559007 | MS.gene47123:CDS |
| GGTGAGATGTTTACACGACC+CGG | 0.615294 | 6.3:-16558946 | MS.gene47123:CDS |
| ATATCATACCGTGATTTGGT+TGG | 0.618625 | 6.3:-16559042 | MS.gene47123:CDS |
| TACCTGAGCTTCGGTAGCAG+GGG | 0.625058 | 6.3:+16558211 | None:intergenic |
| ATTTACCACAACACCAGCAG+GGG | 0.625851 | 6.3:+16558691 | None:intergenic |
| AGCTATCCATGGCCGCACGA+GGG | 0.629777 | 6.3:-16560596 | MS.gene47123:CDS |
| GCTGCTAGATTTGCTAATGG+AGG | 0.631927 | 6.3:-16558880 | MS.gene47123:CDS |
| AATTTACCACAACACCAGCA+GGG | 0.637170 | 6.3:+16558690 | None:intergenic |
| AAGCAACACCAACCAAATCA+CGG | 0.657890 | 6.3:+16559034 | None:intergenic |
| TTTACCACAACACCAGCAGG+GGG | 0.660985 | 6.3:+16558692 | None:intergenic |
| AGTTGATGGCCCTAATGATG+AGG | 0.667574 | 6.3:-16558968 | MS.gene47123:CDS |
| ACTTAAGAACAGACCACCGA+AGG | 0.669689 | 6.3:+16557858 | None:intergenic |
| TGTTGCTTACACAGAAGAGG+AGG | 0.673329 | 6.3:-16559019 | MS.gene47123:CDS |
| GTTGATGGCCCTAATGATGA+GGG | 0.689410 | 6.3:-16558967 | MS.gene47123:CDS |
| AAGCATGATCATATGAACTG+AGG | 0.690695 | 6.3:+16560570 | None:intergenic |
| TTTATGAGCAGGATTCGTCG+TGG | 0.709208 | 6.3:-16559114 | MS.gene47123:intron |
| GTGTGGATTGAAATGGCTGG+AGG | 0.712617 | 6.3:-16562530 | None:intergenic |
| GGTGCTGTTGAATATGAAGA+CGG | 0.725753 | 6.3:-16558236 | MS.gene47123:CDS |
| GAACTGAGGATTCCCTCGTG+CGG | 0.746302 | 6.3:+16560584 | None:intergenic |
| TTACCACAACACCAGCAGGG+GGG | 0.790206 | 6.3:+16558693 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATATAAATAAATCTTG+TGG | - | chr6.3:16560210-16560229 | MS.gene47123:intron | 10.0% |
| !! | AAAGATTATTAAGATTTCAA+AGG | + | chr6.3:16560872-16560891 | None:intergenic | 15.0% |
| !! | AAGATAAAAATGACATTTAA+GGG | + | chr6.3:16561059-16561078 | None:intergenic | 15.0% |
| !! | ATAACTAAAAATTGAACAAA+TGG | + | chr6.3:16560651-16560670 | None:intergenic | 15.0% |
| !! | ATCTTAATGATATAAATCTT+AGG | - | chr6.3:16560906-16560925 | MS.gene47123:intron | 15.0% |
| !! | TAAGATAAAAATGACATTTA+AGG | + | chr6.3:16561060-16561079 | None:intergenic | 15.0% |
| !! | TCTTTCATTTATATTACTAA+GGG | - | chr6.3:16560113-16560132 | MS.gene47123:intron | 15.0% |
| !! | TTCTTTCATTTATATTACTA+AGG | - | chr6.3:16560112-16560131 | MS.gene47123:intron | 15.0% |
| !!! | ACTTCATTGAATATTTTATA+TGG | - | chr6.3:16558764-16558783 | MS.gene47123:intron | 15.0% |
| !!! | TTATGCCATTATTTAATTTT+AGG | - | chr6.3:16561919-16561938 | MS.gene47123:intron | 15.0% |
| !! | AAAAGTTAATGTTGAATACT+TGG | - | chr6.3:16560711-16560730 | MS.gene47123:CDS | 20.0% |
| !! | AATCTTCTATTGCATAATTT+AGG | + | chr6.3:16561133-16561152 | None:intergenic | 20.0% |
| !! | AGATAAAAATGACATTTAAG+GGG | + | chr6.3:16561058-16561077 | None:intergenic | 20.0% |
| !! | CAAAAATACATAGATTTCAA+TGG | - | chr6.3:16560331-16560350 | MS.gene47123:intron | 20.0% |
| !! | CATACAAAAATAAGGTTAAT+AGG | - | chr6.3:16558343-16558362 | MS.gene47123:intron | 20.0% |
| !! | CTTTCATTTATATTACTAAG+GGG | - | chr6.3:16560114-16560133 | MS.gene47123:intron | 20.0% |
| !! | GAACACCTAAAATTAAATAA+TGG | + | chr6.3:16561927-16561946 | None:intergenic | 20.0% |
| !! | TAGTTGTTAACTATAAAGAA+TGG | - | chr6.3:16559921-16559940 | MS.gene47123:intron | 20.0% |
| !! | TGATAATTGTCTATTAACTT+AGG | - | chr6.3:16562202-16562221 | MS.gene47123:intron | 20.0% |
| !! | TTAATCATAAAAAAGTCTTG+TGG | - | chr6.3:16560168-16560187 | MS.gene47123:intron | 20.0% |
| !! | TTTAGCTGTAAAATATTGTA+AGG | + | chr6.3:16561682-16561701 | None:intergenic | 20.0% |
| !! | TTTCATTTATATTACTAAGG+GGG | - | chr6.3:16560115-16560134 | MS.gene47123:intron | 20.0% |
| !!! | AAAATGATTTTATGCTTATC+TGG | - | chr6.3:16558006-16558025 | MS.gene47123:intron | 20.0% |
| !!! | AAACTTGTTGCAAAATTAAA+TGG | - | chr6.3:16558212-16558231 | MS.gene47123:intron | 20.0% |
| !!! | AAATCACCTTTAAAATGAAA+AGG | + | chr6.3:16559896-16559915 | None:intergenic | 20.0% |
| !!! | AAATCATATATTTTCTCCAT+TGG | + | chr6.3:16562378-16562397 | None:intergenic | 20.0% |
| !!! | AAATGTTTTAACAATTTAGG+TGG | - | chr6.3:16559158-16559177 | MS.gene47123:intron | 20.0% |
| !!! | AAGATTTTCCTCTTTATTTT+AGG | - | chr6.3:16561147-16561166 | MS.gene47123:intron | 20.0% |
| !!! | AGATTTTCCTCTTTATTTTA+GGG | - | chr6.3:16561148-16561167 | MS.gene47123:intron | 20.0% |
| !!! | ATACAAGTTAAAGTTATTTC+TGG | + | chr6.3:16561572-16561591 | None:intergenic | 20.0% |
| !!! | CAAGCTTAATTTTTTTGTTA+AGG | - | chr6.3:16560675-16560694 | MS.gene47123:CDS | 20.0% |
| !!! | GGAAAATGTTTTAACAATTT+AGG | - | chr6.3:16559155-16559174 | MS.gene47123:intron | 20.0% |
| !!! | TAACTTTAACTTGTATTTTC+AGG | - | chr6.3:16561576-16561595 | MS.gene47123:intron | 20.0% |
| !!! | TATGTATTTTTGAATACCAA+TGG | + | chr6.3:16560323-16560342 | None:intergenic | 20.0% |
| !!! | TCCTATATTTTCATGTTTTT+GGG | - | chr6.3:16559817-16559836 | MS.gene47123:intron | 20.0% |
| !!! | TTAACTAATTTTTTATGAGC+AGG | - | chr6.3:16561219-16561238 | MS.gene47123:intron | 20.0% |
| !!! | TTCCTATATTTTCATGTTTT+TGG | - | chr6.3:16559816-16559835 | MS.gene47123:intron | 20.0% |
| !!! | TTTATACTTTTGTGAATGTT+AGG | - | chr6.3:16557913-16557932 | MS.gene47123:CDS | 20.0% |
| !!! | TTTCAATTTTGGACTTAAAA+TGG | - | chr6.3:16557952-16557971 | MS.gene47123:intron | 20.0% |
| ! | AAATCTCAATTGAATACCAA+CGG | + | chr6.3:16560281-16560300 | None:intergenic | 25.0% |
| ! | AACAAATAACAGCACAAAAA+TGG | + | chr6.3:16562240-16562259 | None:intergenic | 25.0% |
| ! | AATTAAGAATTATCTCTTGC+TGG | - | chr6.3:16559134-16559153 | MS.gene47123:intron | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | + | chr6.3:16559978-16559997 | None:intergenic | 25.0% |
| ! | ACCCAAAAACATGAAAATAT+AGG | + | chr6.3:16559821-16559840 | None:intergenic | 25.0% |
| ! | AGTCATTAAAGCTATGATAT+GGG | + | chr6.3:16559339-16559358 | None:intergenic | 25.0% |
| ! | ATATTCAATGAAGTTTCAAC+TGG | + | chr6.3:16558758-16558777 | None:intergenic | 25.0% |
| ! | ATGGATATTTGTACTTTCAT+TGG | - | chr6.3:16562435-16562454 | MS.gene47123:intron | 25.0% |
| ! | ATTATAATGCAGATTAGAGA+AGG | - | chr6.3:16562024-16562043 | MS.gene47123:intron | 25.0% |
| ! | ATTGCTTATAAAATGTCCAT+TGG | - | chr6.3:16560304-16560323 | MS.gene47123:intron | 25.0% |
| ! | CAGTCTAGAAAAAAAAATCA+TGG | + | chr6.3:16561089-16561108 | None:intergenic | 25.0% |
| ! | CATGAAAATATAGGAAAACT+CGG | + | chr6.3:16559812-16559831 | None:intergenic | 25.0% |
| ! | GACTATCAAGATTTATCATA+TGG | + | chr6.3:16560936-16560955 | None:intergenic | 25.0% |
| ! | GTATACGTCATACAAAAATA+AGG | - | chr6.3:16558335-16558354 | MS.gene47123:intron | 25.0% |
| ! | GTATACTCTTATAAGTTTAC+AGG | + | chr6.3:16558321-16558340 | None:intergenic | 25.0% |
| ! | TAACATTAGATATTTGTGCA+TGG | - | chr6.3:16561990-16562009 | MS.gene47123:intron | 25.0% |
| ! | TATAAAATTATCACGAAGAG+AGG | + | chr6.3:16557899-16557918 | None:intergenic | 25.0% |
| ! | TCAAAGGATTTATAACAAGA+AGG | + | chr6.3:16560856-16560875 | None:intergenic | 25.0% |
| ! | TTCATTTATATTACTAAGGG+GGG | - | chr6.3:16560116-16560135 | MS.gene47123:intron | 25.0% |
| ! | TTTCTTCTATTACATGCTTA+GGG | - | chr6.3:16559408-16559427 | MS.gene47123:intron | 25.0% |
| !! | AAAACTTTTGCAACAACATA+TGG | + | chr6.3:16559071-16559090 | None:intergenic | 25.0% |
| !! | ATTGTATTTACAGCTTTTCA+TGG | + | chr6.3:16559249-16559268 | None:intergenic | 25.0% |
| !! | TAGACTCCTTTTCATTTTAA+AGG | - | chr6.3:16559887-16559906 | MS.gene47123:intron | 25.0% |
| !! | TCAAGTCAAACTTTGAAAAA+TGG | + | chr6.3:16558910-16558929 | None:intergenic | 25.0% |
| !! | TGCAAAAGTTTTTAAACTAG+CGG | - | chr6.3:16559079-16559098 | MS.gene47123:CDS | 25.0% |
| !! | TGCAGAAGTTGTTATATTTT+GGG | - | chr6.3:16561723-16561742 | MS.gene47123:intron | 25.0% |
| !! | TTGTATTTACAGCTTTTCAT+GGG | + | chr6.3:16559248-16559267 | None:intergenic | 25.0% |
| !! | TTTTACGAGAATGAAATTGT+AGG | + | chr6.3:16560622-16560641 | None:intergenic | 25.0% |
| !!! | AGTACATCAGTCTTATTTTA+TGG | + | chr6.3:16558087-16558106 | None:intergenic | 25.0% |
| !!! | CATAATGGACTTTTGAATAA+AGG | + | chr6.3:16558239-16558258 | None:intergenic | 25.0% |
| !!! | CTTATTTTATGGCAGATTTT+GGG | + | chr6.3:16558076-16558095 | None:intergenic | 25.0% |
| !!! | TCTTATTTTATGGCAGATTT+TGG | + | chr6.3:16558077-16558096 | None:intergenic | 25.0% |
| AAAAAGGCCCTAAAATAAAG+AGG | + | chr6.3:16561158-16561177 | None:intergenic | 30.0% | |
| AATAGTTATGCTTTACAGCA+TGG | - | chr6.3:16558396-16558415 | MS.gene47123:intron | 30.0% | |
| AATGAGAAAATGAATCTCGT+TGG | + | chr6.3:16560481-16560500 | None:intergenic | 30.0% | |
| ACTTCATAACTTCTTCATGA+TGG | - | chr6.3:16558661-16558680 | MS.gene47123:intron | 30.0% | |
| ATACCTAACTCTTAGTCTAA+GGG | + | chr6.3:16557981-16558000 | None:intergenic | 30.0% | |
| ATAGTTATGCTTTACAGCAT+GGG | - | chr6.3:16558397-16558416 | MS.gene47123:intron | 30.0% | |
| ATATCTAGTATGAGTAGCTT+GGG | + | chr6.3:16559859-16559878 | None:intergenic | 30.0% | |
| ATGCCTAAAATGCTTAATGA+TGG | - | chr6.3:16562087-16562106 | MS.gene47123:intron | 30.0% | |
| ATGTAGCAATTAATGGTAAG+AGG | + | chr6.3:16558873-16558892 | None:intergenic | 30.0% | |
| ATTATCGATGACATAGATGA+AGG | + | chr6.3:16559589-16559608 | None:intergenic | 30.0% | |
| CTTCATAACTTCTTCATGAT+GGG | - | chr6.3:16558662-16558681 | MS.gene47123:intron | 30.0% | |
| CTTTCTTCTATTACATGCTT+AGG | - | chr6.3:16559407-16559426 | MS.gene47123:intron | 30.0% | |
| GACAACACGAAATCAAAATT+GGG | + | chr6.3:16560459-16560478 | None:intergenic | 30.0% | |
| GAGTCATTAAAGCTATGATA+TGG | + | chr6.3:16559340-16559359 | None:intergenic | 30.0% | |
| GTTGTAGGTACATTCTTAAT+TGG | - | chr6.3:16560087-16560106 | MS.gene47123:intron | 30.0% | |
| TAGGGTCATTGTTTGATATA+GGG | - | chr6.3:16559426-16559445 | MS.gene47123:intron | 30.0% | |
| TATATCTAGTATGAGTAGCT+TGG | + | chr6.3:16559860-16559879 | None:intergenic | 30.0% | |
| TATCAAAGACATAGAATGAC+AGG | + | chr6.3:16561285-16561304 | None:intergenic | 30.0% | |
| TGGATGAACATTATATCCTA+GGG | + | chr6.3:16558428-16558447 | None:intergenic | 30.0% | |
| TTAGACTAAGAGTTAGGTAT+CGG | - | chr6.3:16557981-16558000 | MS.gene47123:intron | 30.0% | |
| TTAGGGTCATTGTTTGATAT+AGG | - | chr6.3:16559425-16559444 | MS.gene47123:intron | 30.0% | |
| TTCTTTATACCCTAAATGAC+CGG | + | chr6.3:16559300-16559319 | None:intergenic | 30.0% | |
| TTTGATATCATACCGTGATT+TGG | - | chr6.3:16561298-16561317 | MS.gene47123:intron | 30.0% | |
| ! | AAAAGAGGTTTTACTGTGTT+AGG | - | chr6.3:16558722-16558741 | MS.gene47123:CDS | 30.0% |
| ! | AGCATTGAAATTGAAATAGC+AGG | - | chr6.3:16558560-16558579 | MS.gene47123:intron | 30.0% |
| ! | ATCATTAAGCATTTTAGGCA+TGG | + | chr6.3:16562088-16562107 | None:intergenic | 30.0% |
| ! | CTAGACTGTAATTTTCTGAA+AGG | - | chr6.3:16561101-16561120 | MS.gene47123:intron | 30.0% |
| ! | CTGCAGAAGTTGTTATATTT+TGG | - | chr6.3:16561722-16561741 | MS.gene47123:intron | 30.0% |
| ! | CTTGTTTATTGTTCTGAACA+TGG | + | chr6.3:16558192-16558211 | None:intergenic | 30.0% |
| ! | TCATATATTTTCTCCATTGG+AGG | + | chr6.3:16562375-16562394 | None:intergenic | 30.0% |
| ! | TGTATTGTCACACTAGTTTA+GGG | + | chr6.3:16561965-16561984 | None:intergenic | 30.0% |
| ! | TTATAACAATTTTCCTTCCC+TGG | - | chr6.3:16559513-16559532 | MS.gene47123:intron | 30.0% |
| !! | AGAAGTTGTTATATTTTGGG+CGG | - | chr6.3:16561726-16561745 | MS.gene47123:intron | 30.0% |
| !! | CAATGGATTCTTTTATGAAG+TGG | - | chr6.3:16560348-16560367 | MS.gene47123:intron | 30.0% |
| !! | CTTATAGCAGTTTTGTCAAA+TGG | + | chr6.3:16558279-16558298 | None:intergenic | 30.0% |
| !! | GGATTTGTTAGAAGAATGAT+AGG | + | chr6.3:16562354-16562373 | None:intergenic | 30.0% |
| !! | TGTTATTTGTTGTTGCAGAT+GGG | - | chr6.3:16562249-16562268 | MS.gene47123:intron | 30.0% |
| !!! | AATCATGCTGATGGATTTTT+AGG | - | chr6.3:16560593-16560612 | MS.gene47123:CDS | 30.0% |
| !!! | ATGTTGTGTCATTTTTGTCT+TGG | - | chr6.3:16562277-16562296 | MS.gene47123:intron | 30.0% |
| !!! | CACTATAATCCTTATTTTCC+TGG | - | chr6.3:16562051-16562070 | MS.gene47123:intron | 30.0% |
| !!! | TATAATCCTTATTTTCCTGG+TGG | - | chr6.3:16562054-16562073 | MS.gene47123:intron | 30.0% |
| !!! | TGTTGTGTCATTTTTGTCTT+GGG | - | chr6.3:16562278-16562297 | MS.gene47123:intron | 30.0% |
| !!! | TTATTTTAGGGCCTTTTTCT+TGG | - | chr6.3:16561160-16561179 | MS.gene47123:intron | 30.0% |
| AACGTTACTAATGACAACTG+TGG | - | chr6.3:16558035-16558054 | MS.gene47123:CDS | 35.0% | |
| AAGCATGATCATATGAACTG+AGG | + | chr6.3:16559777-16559796 | None:intergenic | 35.0% | |
| ACATGCAGATGGGATTTAAA+TGG | - | chr6.3:16562416-16562435 | MS.gene47123:intron | 35.0% | |
| ACGTTACTAATGACAACTGT+GGG | - | chr6.3:16558036-16558055 | MS.gene47123:CDS | 35.0% | |
| ACTCTAACTGTATACGTAGA+TGG | + | chr6.3:16560561-16560580 | None:intergenic | 35.0% | |
| AGAAGAAAGCTCCCATTAAT+TGG | + | chr6.3:16559396-16559415 | None:intergenic | 35.0% | |
| AGTAAGTAATTGGAGATGAG+AGG | + | chr6.3:16558490-16558509 | None:intergenic | 35.0% | |
| ATAGCAGACTGTTCAGAAAT+GGG | + | chr6.3:16558825-16558844 | None:intergenic | 35.0% | |
| CAGGTCAAGTATAATGCTAT+AGG | + | chr6.3:16558302-16558321 | None:intergenic | 35.0% | |
| CATCTAATTGTCTGTGCTAA+TGG | - | chr6.3:16559539-16559558 | MS.gene47123:intron | 35.0% | |
| CATTAGCACAGACAATTAGA+TGG | + | chr6.3:16559541-16559560 | None:intergenic | 35.0% | |
| CTCTAACTGTATACGTAGAT+GGG | + | chr6.3:16560560-16560579 | None:intergenic | 35.0% | |
| CTGGATGAACATTATATCCT+AGG | + | chr6.3:16558429-16558448 | None:intergenic | 35.0% | |
| CTTCATAGGTTGTTAGTTGT+AGG | - | chr6.3:16560072-16560091 | MS.gene47123:intron | 35.0% | |
| GAAGAATGATAGGATAACAG+AGG | + | chr6.3:16562344-16562363 | None:intergenic | 35.0% | |
| GATACCTAACTCTTAGTCTA+AGG | + | chr6.3:16557982-16558001 | None:intergenic | 35.0% | |
| GATTCATTTGAATATGGCTG+AGG | + | chr6.3:16561443-16561462 | None:intergenic | 35.0% | |
| GCTTTACTCGAGTAAGTAAT+TGG | + | chr6.3:16558500-16558519 | None:intergenic | 35.0% | |
| GGACAACACGAAATCAAAAT+TGG | + | chr6.3:16560460-16560479 | None:intergenic | 35.0% | |
| GTATAGGCCAAACTATTAAG+CGG | - | chr6.3:16561848-16561867 | MS.gene47123:intron | 35.0% | |
| TAATTGGAGATGAGAGGATA+AGG | + | chr6.3:16558484-16558503 | None:intergenic | 35.0% | |
| TATAGCAGACTGTTCAGAAA+TGG | + | chr6.3:16558826-16558845 | None:intergenic | 35.0% | |
| TATAGGCCAAACTATTAAGC+GGG | - | chr6.3:16561849-16561868 | MS.gene47123:intron | 35.0% | |
| TCGATAATCACGAAGAATGA+TGG | - | chr6.3:16559601-16559620 | MS.gene47123:intron | 35.0% | |
| TCTCATCACCAAAGTAATGT+CGG | - | chr6.3:16561508-16561527 | MS.gene47123:intron | 35.0% | |
| TCTTCTAACAAATCCTCCAA+TGG | - | chr6.3:16562359-16562378 | MS.gene47123:intron | 35.0% | |
| TCTTTATACCCTAAATGACC+GGG | + | chr6.3:16559299-16559318 | None:intergenic | 35.0% | |
| ! | AATTAATGCAAGGGCTCTAA+AGG | + | chr6.3:16559650-16559669 | None:intergenic | 35.0% |
| ! | ACAATAGTGTTGAACTACGT+AGG | + | chr6.3:16559190-16559209 | None:intergenic | 35.0% |
| ! | ATGACATTTAAGGGGTGTAT+TGG | + | chr6.3:16561050-16561069 | None:intergenic | 35.0% |
| ! | ATTTAAGGGGTGTATTGGAT+TGG | + | chr6.3:16561045-16561064 | None:intergenic | 35.0% |
| ! | CTAAGTGTTGTGTTGTGATA+CGG | + | chr6.3:16558460-16558479 | None:intergenic | 35.0% |
| ! | CTGTATTGTCACACTAGTTT+AGG | + | chr6.3:16561966-16561985 | None:intergenic | 35.0% |
| ! | GCACCATCATTAAGCATTTT+AGG | + | chr6.3:16562093-16562112 | None:intergenic | 35.0% |
| ! | GCAGCTGATTCATTTGAATA+TGG | + | chr6.3:16561449-16561468 | None:intergenic | 35.0% |
| ! | GGTAAGAGGAATTCTAAAGA+AGG | + | chr6.3:16558859-16558878 | None:intergenic | 35.0% |
| ! | GTATTGTCACACTAGTTTAG+GGG | + | chr6.3:16561964-16561983 | None:intergenic | 35.0% |
| ! | TCAGGTACTTTTATGTGTTG+TGG | - | chr6.3:16562149-16562168 | MS.gene47123:intron | 35.0% |
| ! | TTTAAGGGGTGTATTGGATT+GGG | + | chr6.3:16561044-16561063 | None:intergenic | 35.0% |
| ! | TTTAGAGCCCTTGCATTAAT+TGG | - | chr6.3:16559649-16559668 | MS.gene47123:intron | 35.0% |
| !! | ACATAAAAGTACCTGAGCTT+CGG | + | chr6.3:16562145-16562164 | None:intergenic | 35.0% |
| !! | ATAACTTCTTCATGATGGGT+TGG | - | chr6.3:16558666-16558685 | MS.gene47123:intron | 35.0% |
| !! | ATATCATACCGTGATTTGGT+TGG | - | chr6.3:16561302-16561321 | MS.gene47123:intron | 35.0% |
| !! | CTGTTATTTGTTGTTGCAGA+TGG | - | chr6.3:16562248-16562267 | MS.gene47123:intron | 35.0% |
| !! | GTGTTTTTCAGCAGTTATTG+AGG | - | chr6.3:16557836-16557855 | MS.gene47123:CDS | 35.0% |
| !! | GTTATTTGTTGTTGCAGATG+GGG | - | chr6.3:16562250-16562269 | MS.gene47123:intron | 35.0% |
| !! | GTTGTTTGTTACTTTGCTCT+GGG | - | chr6.3:16560523-16560542 | MS.gene47123:intron | 35.0% |
| !! | TTGTTTGTTACTTTGCTCTG+GGG | - | chr6.3:16560524-16560543 | MS.gene47123:intron | 35.0% |
| !! | TTTTTCAGCAGTTATTGAGG+AGG | - | chr6.3:16557839-16557858 | MS.gene47123:CDS | 35.0% |
| !!! | GCTTCTGGTTCTTTCAATTT+TGG | - | chr6.3:16557941-16557960 | MS.gene47123:intron | 35.0% |
| AACAACCTTTATATGTGCCC+TGG | + | chr6.3:16560509-16560528 | None:intergenic | 40.0% | |
| AACATCTCACCCTCATCATT+AGG | + | chr6.3:16561389-16561408 | None:intergenic | 40.0% | |
| AACTGTATACGTAGATGGGA+AGG | + | chr6.3:16560556-16560575 | None:intergenic | 40.0% | |
| AAGCAACACCAACCAAATCA+CGG | + | chr6.3:16561313-16561332 | None:intergenic | 40.0% | |
| AAGCTCCCATTAATTGGACT+TGG | + | chr6.3:16559390-16559409 | None:intergenic | 40.0% | |
| AATTTACCACAACACCAGCA+GGG | + | chr6.3:16561657-16561676 | None:intergenic | 40.0% | |
| ACAGACAATTAGATGGTTCC+AGG | + | chr6.3:16559534-16559553 | None:intergenic | 40.0% | |
| ACAGTTAGAGTCATCTTCGT+CGG | - | chr6.3:16560570-16560589 | MS.gene47123:CDS | 40.0% | |
| ACATAGATGAAGGATTCTGC+AGG | + | chr6.3:16559579-16559598 | None:intergenic | 40.0% | |
| ACATCTCACCCTCATCATTA+GGG | + | chr6.3:16561388-16561407 | None:intergenic | 40.0% | |
| ACATTGCTACTACATGCAGA+TGG | - | chr6.3:16562405-16562424 | MS.gene47123:intron | 40.0% | |
| AGACCCTTAGACTAAGAGTT+AGG | - | chr6.3:16557975-16557994 | MS.gene47123:intron | 40.0% | |
| ATGAATCCTGGCCAAGAAAA+AGG | + | chr6.3:16561174-16561193 | None:intergenic | 40.0% | |
| ATTCACCGTGTTATGAATCC+TGG | + | chr6.3:16561186-16561205 | None:intergenic | 40.0% | |
| CACCATAACAGTCTTTGCAA+TGG | + | chr6.3:16559457-16559476 | None:intergenic | 40.0% | |
| CAGACAATTAGATGGTTCCA+GGG | + | chr6.3:16559533-16559552 | None:intergenic | 40.0% | |
| CATTGCAAAGACTGTTATGG+TGG | - | chr6.3:16559455-16559474 | MS.gene47123:intron | 40.0% | |
| CATTGCTACTACATGCAGAT+GGG | - | chr6.3:16562406-16562425 | MS.gene47123:intron | 40.0% | |
| GAATGTTAGGACTATGCTTC+TGG | - | chr6.3:16557926-16557945 | MS.gene47123:intron | 40.0% | |
| GACCATTGCAAAGACTGTTA+TGG | - | chr6.3:16559452-16559471 | MS.gene47123:intron | 40.0% | |
| TACGTGTTTGCTCTTCTTAC+CGG | - | chr6.3:16561619-16561638 | MS.gene47123:intron | 40.0% | |
| TATAAAGAATGGACACGCGT+CGG | - | chr6.3:16559932-16559951 | MS.gene47123:intron | 40.0% | |
| TGAGATGGAAGAGAGAAAAC+TGG | - | chr6.3:16562311-16562330 | MS.gene47123:intron | 40.0% | |
| TGCTTACAGGAGAATGAGAT+TGG | + | chr6.3:16557870-16557889 | None:intergenic | 40.0% | |
| TGGCTCCAAGTCCAATTAAT+GGG | - | chr6.3:16559382-16559401 | MS.gene47123:intron | 40.0% | |
| TGTGCGCATGTAGCAATTAA+TGG | + | chr6.3:16558880-16558899 | None:intergenic | 40.0% | |
| TGTTCTTAAGTCTCGCAAGT+TGG | - | chr6.3:16562498-16562517 | MS.gene47123:CDS | 40.0% | |
| TTACACAGAAGAGGAGGTAA+AGG | - | chr6.3:16561331-16561350 | MS.gene47123:intron | 40.0% | |
| TTGGCTCCAAGTCCAATTAA+TGG | - | chr6.3:16559381-16559400 | MS.gene47123:intron | 40.0% | |
| ! | AAAGCGATCACTGAGTTTTC+CGG | + | chr6.3:16561420-16561439 | None:intergenic | 40.0% |
| ! | AAGCATTTTAGGCATGGCAA+TGG | + | chr6.3:16562082-16562101 | None:intergenic | 40.0% |
| ! | AGCTTTAATGACTCCCTCTT+CGG | - | chr6.3:16559346-16559365 | MS.gene47123:intron | 40.0% |
| ! | AGTTTTCTCTCTTCCATCTC+AGG | + | chr6.3:16562312-16562331 | None:intergenic | 40.0% |
| ! | CATTTTCTCATTGACCTCCA+GGG | - | chr6.3:16560489-16560508 | MS.gene47123:intron | 40.0% |
| ! | CTCTTTTGCAAACACAGCAT+CGG | + | chr6.3:16558709-16558728 | None:intergenic | 40.0% |
| ! | GGTACTTTTATGTGTTGTGG+AGG | - | chr6.3:16562152-16562171 | MS.gene47123:intron | 40.0% |
| ! | TATTACTAAGGGGGGTGTAT+TGG | - | chr6.3:16560124-16560143 | MS.gene47123:intron | 40.0% |
| ! | TCATTTTCTCATTGACCTCC+AGG | - | chr6.3:16560488-16560507 | MS.gene47123:intron | 40.0% |
| ! | TTGTGATACGGACTACTTTC+TGG | + | chr6.3:16558448-16558467 | None:intergenic | 40.0% |
| !! | ATTTTCCGTGTTGACGTGTT+GGG | - | chr6.3:16560012-16560031 | MS.gene47123:intron | 40.0% |
| !! | GGTGCTGTTGAATATGAAGA+CGG | - | chr6.3:16562108-16562127 | MS.gene47123:intron | 40.0% |
| !! | GGTTGTTTGTTACTTTGCTC+TGG | - | chr6.3:16560522-16560541 | MS.gene47123:intron | 40.0% |
| !! | TATTTTCAGGCTCGTCACAA+TGG | - | chr6.3:16561589-16561608 | MS.gene47123:intron | 40.0% |
| !! | TATTTTCCGTGTTGACGTGT+TGG | - | chr6.3:16560011-16560030 | MS.gene47123:intron | 40.0% |
| !! | TCAGCTGCTAGATTTGCTAA+TGG | - | chr6.3:16561461-16561480 | MS.gene47123:intron | 40.0% |
| !! | TTGGTGATGAGACTTAGATC+TGG | + | chr6.3:16561500-16561519 | None:intergenic | 40.0% |
| AACCTTTATATGTGCCCTGG+AGG | + | chr6.3:16560506-16560525 | None:intergenic | 45.0% | |
| ACTTAAGAACAGACCACCGA+AGG | + | chr6.3:16562489-16562508 | None:intergenic | 45.0% | |
| AGAAGAGGAGGTAAAGGCAA+TGG | - | chr6.3:16561337-16561356 | MS.gene47123:intron | 45.0% | |
| AGAGAGGATCTAGTGCTTAC+AGG | + | chr6.3:16557883-16557902 | None:intergenic | 45.0% | |
| ATGGCTCCACCAGGAAAATA+AGG | + | chr6.3:16562063-16562082 | None:intergenic | 45.0% | |
| ATTTACCACAACACCAGCAG+GGG | + | chr6.3:16561656-16561675 | None:intergenic | 45.0% | |
| CAATTAGATGGTTCCAGGGA+AGG | + | chr6.3:16559529-16559548 | None:intergenic | 45.0% | |
| CCAAACTATTAAGCGGGATG+TGG | - | chr6.3:16561855-16561874 | MS.gene47123:intron | 45.0% | |
| CCAAATCATGCTCAATGTCC+CGG | - | chr6.3:16559278-16559297 | MS.gene47123:intron | 45.0% | |
| CCACATCCCGCTTAATAGTT+TGG | + | chr6.3:16561858-16561877 | None:intergenic | 45.0% | |
| CGATGCTGTGTTTGCAAAAG+AGG | - | chr6.3:16558707-16558726 | MS.gene47123:CDS | 45.0% | |
| CTCAATGTCCCGGTCATTTA+GGG | - | chr6.3:16559288-16559307 | MS.gene47123:intron | 45.0% | |
| CTTGGCCAGGATTCATAACA+CGG | - | chr6.3:16561178-16561197 | MS.gene47123:intron | 45.0% | |
| GAATTTACCACAACACCAGC+AGG | + | chr6.3:16561658-16561677 | None:intergenic | 45.0% | |
| GACTGATGTACTGCAGCATA+TGG | - | chr6.3:16558095-16558114 | MS.gene47123:intron | 45.0% | |
| GAGACTTAGATCTGGAGGAT+AGG | + | chr6.3:16561492-16561511 | None:intergenic | 45.0% | |
| GCTGAGATTGAGGTAGTTGA+TGG | - | chr6.3:16561362-16561381 | MS.gene47123:intron | 45.0% | |
| GGTGAGATGGGGATAAGTAT+AGG | - | chr6.3:16561832-16561851 | MS.gene47123:intron | 45.0% | |
| GTGATGAGACTTAGATCTGG+AGG | + | chr6.3:16561497-16561516 | None:intergenic | 45.0% | |
| TACAACGCAACGAAATCCGT+TGG | - | chr6.3:16560262-16560281 | MS.gene47123:intron | 45.0% | |
| TCCATTATGCCATACCACCA+TGG | - | chr6.3:16558250-16558269 | MS.gene47123:CDS | 45.0% | |
| TGACAACTGTGGGTTCATGA+TGG | - | chr6.3:16558046-16558065 | MS.gene47123:CDS | 45.0% | |
| TGATGTACTGCAGCATATGG+CGG | - | chr6.3:16558098-16558117 | MS.gene47123:intron | 45.0% | |
| TGTCTGTGTCTGTGCTTCAT+AGG | - | chr6.3:16560058-16560077 | MS.gene47123:intron | 45.0% | |
| TTTATGAGCAGGATTCGTCG+TGG | - | chr6.3:16561230-16561249 | MS.gene47123:intron | 45.0% | |
| ! | AAGCGATCACTGAGTTTTCC+GGG | + | chr6.3:16561419-16561438 | None:intergenic | 45.0% |
| ! | ACCGGCTCCAATTAATGCAA+GGG | + | chr6.3:16559659-16559678 | None:intergenic | 45.0% |
| ! | ATCACGAAGAATGATGGTGC+TGG | - | chr6.3:16559607-16559626 | MS.gene47123:intron | 45.0% |
| ! | GTTTTGTCAAATGGCAGCCA+TGG | + | chr6.3:16558270-16558289 | None:intergenic | 45.0% |
| ! | TGTTGCTTACACAGAAGAGG+AGG | - | chr6.3:16561325-16561344 | MS.gene47123:intron | 45.0% |
| !! | AGTTGATGGCCCTAATGATG+AGG | - | chr6.3:16561376-16561395 | MS.gene47123:intron | 45.0% |
| !! | GCTGCTAGATTTGCTAATGG+AGG | - | chr6.3:16561464-16561483 | MS.gene47123:intron | 45.0% |
| !! | GTTGATGGCCCTAATGATGA+GGG | - | chr6.3:16561377-16561396 | MS.gene47123:intron | 45.0% |
| !! | TGGTGTTGCTTACACAGAAG+AGG | - | chr6.3:16561322-16561341 | MS.gene47123:intron | 45.0% |
| !! | TTTTCCGTGTTGACGTGTTG+GGG | - | chr6.3:16560013-16560032 | MS.gene47123:intron | 45.0% |
| !!! | GTCATTTTTGTCTTGGGCTG+CGG | - | chr6.3:16562284-16562303 | MS.gene47123:intron | 45.0% |
| AAATGGCAGCCATGGTGGTA+TGG | + | chr6.3:16558262-16558281 | None:intergenic | 50.0% | |
| ACAGACACAGACACAGACAC+CGG | + | chr6.3:16560051-16560070 | None:intergenic | 50.0% | |
| CCGGGACATTGAGCATGATT+TGG | + | chr6.3:16559281-16559300 | None:intergenic | 50.0% | |
| CTGCGTATTATCGTCGCCTT+CGG | - | chr6.3:16562470-16562489 | MS.gene47123:intron | 50.0% | |
| CTTCGTCGGAATCATGCTGA+TGG | - | chr6.3:16560584-16560603 | MS.gene47123:CDS | 50.0% | |
| GACCTCCAGGGCACATATAA+AGG | - | chr6.3:16560501-16560520 | MS.gene47123:intron | 50.0% | |
| GCAGACAGCCGACATTACTT+TGG | + | chr6.3:16561519-16561538 | None:intergenic | 50.0% | |
| GCCATGGTGGTATGGCATAA+TGG | + | chr6.3:16558254-16558273 | None:intergenic | 50.0% | |
| GCCCTTGCATTAATTGGAGC+CGG | - | chr6.3:16559655-16559674 | MS.gene47123:intron | 50.0% | |
| GCTCAATGTCCCGGTCATTT+AGG | - | chr6.3:16559287-16559306 | MS.gene47123:intron | 50.0% | |
| GGTGAGATGTTTACACGACC+CGG | - | chr6.3:16561398-16561417 | MS.gene47123:intron | 50.0% | |
| TCAGCTGATGAAGCTGAGCA+TGG | - | chr6.3:16559712-16559731 | MS.gene47123:intron | 50.0% | |
| TTAATTGGAGCCGGTGTCTC+AGG | - | chr6.3:16559664-16559683 | MS.gene47123:intron | 50.0% | |
| TTGTCAAATGGCAGCCATGG+TGG | + | chr6.3:16558267-16558286 | None:intergenic | 50.0% | |
| TTTACCACAACACCAGCAGG+GGG | + | chr6.3:16561655-16561674 | None:intergenic | 50.0% | |
| ! | CATAGGTGTCGTGTCGATGT+CGG | + | chr6.3:16559961-16559980 | None:intergenic | 50.0% |
| ! | TTAGGGCCTTTTTCTTGGCC+AGG | - | chr6.3:16561165-16561184 | MS.gene47123:intron | 50.0% |
| !! | CACCGGCTCCAATTAATGCA+AGG | + | chr6.3:16559660-16559679 | None:intergenic | 50.0% |
| !! | CATGATGGGTTGGTGATGCT+GGG | - | chr6.3:16558676-16558695 | MS.gene47123:intron | 50.0% |
| !! | TCATGATGGGTTGGTGATGC+TGG | - | chr6.3:16558675-16558694 | MS.gene47123:intron | 50.0% |
| !! | TTTGGGCGGCTTTGAAAGCA+TGG | - | chr6.3:16561740-16561759 | MS.gene47123:intron | 50.0% |
| AAGTCCTCAGGAGTCCGAAG+AGG | + | chr6.3:16559363-16559382 | None:intergenic | 55.0% | |
| AGTACCTGAGCTTCGGTAGC+AGG | + | chr6.3:16562138-16562157 | None:intergenic | 55.0% | |
| AGTCCTCAGGAGTCCGAAGA+GGG | + | chr6.3:16559362-16559381 | None:intergenic | 55.0% | |
| ATGGATAGCTTGGAGCAGCC+AGG | + | chr6.3:16559738-16559757 | None:intergenic | 55.0% | |
| CAGACCCCAACACGTCAACA+CGG | + | chr6.3:16560020-16560039 | None:intergenic | 55.0% | |
| CGTATTATCGTCGCCTTCGG+TGG | - | chr6.3:16562473-16562492 | MS.gene47123:intron | 55.0% | |
| GAACTGAGGATTCCCTCGTG+CGG | + | chr6.3:16559763-16559782 | None:intergenic | 55.0% | |
| GGCAATGGCTGCTGAGATTG+AGG | - | chr6.3:16561352-16561371 | MS.gene47123:intron | 55.0% | |
| GTACCTGAGCTTCGGTAGCA+GGG | + | chr6.3:16562137-16562156 | None:intergenic | 55.0% | |
| TACAGCATGGGATGCTCCCT+AGG | - | chr6.3:16558409-16558428 | MS.gene47123:intron | 55.0% | |
| TACCTGAGCTTCGGTAGCAG+GGG | + | chr6.3:16562136-16562155 | None:intergenic | 55.0% | |
| TCTTCGGACTCCTGAGGACT+TGG | - | chr6.3:16559362-16559381 | MS.gene47123:intron | 55.0% | |
| TGATGAAGCTGAGCATGGCC+TGG | - | chr6.3:16559717-16559736 | MS.gene47123:intron | 55.0% | |
| TGGCTGCTCCAAGCTATCCA+TGG | - | chr6.3:16559737-16559756 | MS.gene47123:intron | 55.0% | |
| TTACCACAACACCAGCAGGG+GGG | + | chr6.3:16561654-16561673 | None:intergenic | 55.0% | |
| AAGCTATCCATGGCCGCACG+AGG | - | chr6.3:16559747-16559766 | MS.gene47123:intron | 60.0% | |
| ACTCCCTCTTCGGACTCCTG+AGG | - | chr6.3:16559356-16559375 | MS.gene47123:intron | 60.0% | |
| AGCAGGGGGGTCACGATAAC+CGG | + | chr6.3:16561641-16561660 | None:intergenic | 60.0% | |
| AGCCGGTGTCTCAGGTCTTC+TGG | - | chr6.3:16559672-16559691 | MS.gene47123:intron | 60.0% | |
| AGCTATCCATGGCCGCACGA+GGG | - | chr6.3:16559748-16559767 | MS.gene47123:intron | 60.0% | |
| GCCCAGAAGACCTGAGACAC+CGG | + | chr6.3:16559677-16559696 | None:intergenic | 60.0% | |
| GCCGGTGTCTCAGGTCTTCT+GGG | - | chr6.3:16559673-16559692 | MS.gene47123:intron | 60.0% | |
| GGACTTGGAGCCAAGTCCTC+AGG | + | chr6.3:16559375-16559394 | None:intergenic | 60.0% | |
| GTTGGGGTCTGTGTCGTGTC+CGG | - | chr6.3:16560029-16560048 | MS.gene47123:intron | 60.0% | |
| TACCCCTGCTACCGAAGCTC+AGG | - | chr6.3:16562131-16562150 | MS.gene47123:intron | 60.0% | |
| TCGTGCGGCCATGGATAGCT+TGG | + | chr6.3:16559748-16559767 | None:intergenic | 60.0% | |
| TTGGGCTGCGGAACCTGAGA+TGG | - | chr6.3:16562296-16562315 | MS.gene47123:intron | 60.0% | |
| AGGATTCCCTCGTGCGGCCA+TGG | + | chr6.3:16559757-16559776 | None:intergenic | 65.0% | |
| GGCATGGCAATGGCTCCACC+AGG | + | chr6.3:16562072-16562091 | None:intergenic | 65.0% | |
| GGTTATCGTGACCCCCCTGC+TGG | - | chr6.3:16561640-16561659 | MS.gene47123:intron | 65.0% | |
| ! | TGACCCCCCTGCTGGTGTTG+TGG | - | chr6.3:16561648-16561667 | MS.gene47123:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 16557826 | 16562540 | 16557826 | ID=MS.gene47123 |
| chr6.3 | mRNA | 16557826 | 16562540 | 16557826 | ID=MS.gene47123.t1;Parent=MS.gene47123 |
| chr6.3 | exon | 16562484 | 16562540 | 16562484 | ID=MS.gene47123.t1.exon1;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16562484 | 16562540 | 16562484 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| chr6.3 | exon | 16560569 | 16560783 | 16560569 | ID=MS.gene47123.t1.exon2;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16560569 | 16560783 | 16560569 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| chr6.3 | exon | 16558846 | 16559125 | 16558846 | ID=MS.gene47123.t1.exon3;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16558846 | 16559125 | 16558846 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| chr6.3 | exon | 16558697 | 16558768 | 16558697 | ID=MS.gene47123.t1.exon4;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16558697 | 16558768 | 16558697 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| chr6.3 | exon | 16558214 | 16558330 | 16558214 | ID=MS.gene47123.t1.exon5;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16558214 | 16558330 | 16558214 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| chr6.3 | exon | 16558034 | 16558099 | 16558034 | ID=MS.gene47123.t1.exon6;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16558034 | 16558099 | 16558034 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| chr6.3 | exon | 16557826 | 16557942 | 16557826 | ID=MS.gene47123.t1.exon7;Parent=MS.gene47123.t1 |
| chr6.3 | CDS | 16557826 | 16557942 | 16557826 | ID=cds.MS.gene47123.t1;Parent=MS.gene47123.t1 |
| Gene Sequence |
| Protein sequence |
