Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074111.t1 | XP_003618807.1 | 99.3 | 306 | 2 | 0 | 1 | 306 | 1 | 306 | 5.10E-169 | 603.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074111.t1 | Q9LK29 | 87.3 | 306 | 39 | 0 | 1 | 306 | 2 | 307 | 2.0e-150 | 533.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074111.t1 | G7KN93 | 99.3 | 306 | 2 | 0 | 1 | 306 | 1 | 306 | 3.7e-169 | 603.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene074111 | 0.803699 | 3.08E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene074111 | -0.80258 | 5.25E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene074111 | -0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene074111 | -0.805262 | 1.45E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene074111 | -0.801369 | 9.30E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene074111 | -0.832243 | 1.06E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene074111 | 0.832308 | 1.02E-55 | -1.69E-46 |
| MS.gene052965 | MS.gene074111 | 0.802502 | 5.44E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene074111 | -0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene074111 | 0.827157 | 1.83E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene074111 | -0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene074111 | -0.805166 | 1.52E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene074111 | -0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene057156 | MS.gene074111 | 0.800187 | 1.62E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene074111 | -0.81057 | 1.08E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene074111 | 0.806253 | 9.00E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene074111 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene074111 | -0.81818 | 2.24E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene074111 | 0.838943 | 2.13E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024287 | MS.gene074111 | PPI |
| MS.gene074110 | MS.gene074111 | PPI |
| MS.gene033723 | MS.gene074111 | PPI |
| MS.gene47123 | MS.gene074111 | PPI |
| MS.gene55486 | MS.gene074111 | PPI |
| MS.gene024731 | MS.gene074111 | PPI |
| MS.gene55480 | MS.gene074111 | PPI |
| MS.gene73382 | MS.gene074111 | PPI |
| MS.gene21707 | MS.gene074111 | PPI |
| MS.gene52332 | MS.gene074111 | PPI |
| MS.gene52274 | MS.gene074111 | PPI |
| MS.gene47121 | MS.gene074111 | PPI |
| MS.gene024087 | MS.gene074111 | PPI |
| MS.gene074111 | MS.gene000289 | PPI |
| MS.gene21918 | MS.gene074111 | PPI |
| MS.gene058150 | MS.gene074111 | PPI |
| MS.gene058545 | MS.gene074111 | PPI |
| MS.gene039438 | MS.gene074111 | PPI |
| MS.gene074111 | MS.gene033531 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074111.t1 | MTR_6g023230 | 99.346 | 306 | 2 | 0 | 1 | 306 | 1 | 306 | 0.0 | 628 |
| MS.gene074111.t1 | MTR_6g023290 | 92.834 | 307 | 21 | 1 | 1 | 306 | 1 | 307 | 0.0 | 590 |
| MS.gene074111.t1 | MTR_6g023280 | 78.947 | 57 | 12 | 0 | 131 | 187 | 2 | 58 | 2.99e-27 | 101 |
| MS.gene074111.t1 | MTR_6g023270 | 48.214 | 112 | 35 | 2 | 22 | 116 | 36 | 141 | 9.21e-20 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074111.t1 | AT3G27240 | 87.255 | 306 | 39 | 0 | 1 | 306 | 2 | 307 | 0.0 | 511 |
| MS.gene074111.t1 | AT5G40810 | 86.275 | 306 | 42 | 0 | 1 | 306 | 2 | 307 | 0.0 | 510 |
| MS.gene074111.t1 | AT5G40810 | 92.692 | 260 | 19 | 0 | 47 | 306 | 1 | 260 | 1.23e-168 | 468 |
Find 86 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGGTGTCTCAGGTCTTT+TGG | 0.163244 | 6.1:-6796834 | MS.gene074111:CDS |
| TTAAGAGCCCTTGCTTTAAT+TGG | 0.175578 | 6.1:-6796857 | MS.gene074111:CDS |
| ATGGATATTTGTACTTTCAT+TGG | 0.329694 | 6.1:-6794413 | MS.gene074111:CDS |
| ATGGCTCCACCAGGGAAATA+AGG | 0.352039 | 6.1:+6794779 | None:intergenic |
| TATGTGTTTGCTCTCCTAAC+TGG | 0.353553 | 6.1:-6795446 | MS.gene074111:CDS |
| AATTAAAGCAAGGGCTCTTA+AGG | 0.362156 | 6.1:+6796859 | None:intergenic |
| AACATCTCACCCTCATCATT+GGG | 0.377350 | 6.1:+6795685 | None:intergenic |
| TTAATTGGAGCTGGTGTCTC+AGG | 0.388344 | 6.1:-6796842 | MS.gene074111:CDS |
| TTCTTACCAGAGAATGAGAT+TGG | 0.400483 | 6.1:+6800190 | None:intergenic |
| AAAGACAGTTCCGGCTCTAC+TGG | 0.403205 | 6.1:-6796890 | MS.gene074111:CDS |
| AAAGCGATCACTGAGTTTAC+CGG | 0.403522 | 6.1:+6795654 | None:intergenic |
| AAACATCTCACCCTCATCAT+TGG | 0.411590 | 6.1:+6795684 | None:intergenic |
| TTTGATATCATACCGTGATT+TGG | 0.414012 | 6.1:-6795773 | MS.gene074111:CDS |
| CATTACAATCCTTATTTCCC+TGG | 0.414300 | 6.1:-6794788 | MS.gene074111:CDS |
| GCAGCTGATTCATTTGCATA+TGG | 0.415455 | 6.1:+6795625 | None:intergenic |
| GCGCCATCATTAAGCATCTT+AGG | 0.416554 | 6.1:+6794749 | None:intergenic |
| CTGCTTATTATCGTCGCCTT+CGG | 0.435248 | 6.1:-6794378 | MS.gene074111:CDS |
| AGTACCTGAGCTTCGGTAGC+AGG | 0.443562 | 6.1:+6794704 | None:intergenic |
| GCCCTTGCTTTAATTGGAGC+TGG | 0.448077 | 6.1:-6796851 | MS.gene074111:CDS |
| GTCTCAAAGAAAGACAGTTC+CGG | 0.465331 | 6.1:-6796899 | MS.gene074111:CDS |
| GAAACTCCAATCTCATTCTC+TGG | 0.472075 | 6.1:-6800196 | MS.gene074111:intron |
| TGAGATGGAAGAGCGAAAAC+TGG | 0.475157 | 6.1:-6794529 | MS.gene074111:intron |
| TCAGCTGCTAGGTTTGCTAA+TGG | 0.483837 | 6.1:-6795610 | MS.gene074111:CDS |
| ACTTGCAGATGGGATTCAAA+TGG | 0.499370 | 6.1:-6794432 | MS.gene074111:intron |
| GGAACTGCTGCCAGTAGAGC+CGG | 0.505044 | 6.1:+6796880 | None:intergenic |
| TATCAAAGACATGGAATGGC+AGG | 0.507429 | 6.1:+6795789 | None:intergenic |
| GGCATGGCAATGGCTCCACC+AGG | 0.514815 | 6.1:+6794770 | None:intergenic |
| TTGGGCAGCGGAACCTGAGA+TGG | 0.517204 | 6.1:-6794544 | MS.gene074111:CDS |
| TTGGTAATAAGACTTAGATC+AGG | 0.519781 | 6.1:+6795574 | None:intergenic |
| ACATAAAAGTACCTGAGCTT+CGG | 0.521841 | 6.1:+6794697 | None:intergenic |
| ACTGTCTTTCTTTGAGACAA+TGG | 0.522576 | 6.1:+6796904 | None:intergenic |
| AGAAGAAGAGGTAAAGGCTA+TGG | 0.524696 | 6.1:-6795734 | MS.gene074111:CDS |
| GTACCTGAGCTTCGGTAGCA+GGG | 0.529146 | 6.1:+6794705 | None:intergenic |
| GGCTATGGCAGCTGAGATTG+AGG | 0.530766 | 6.1:-6795719 | MS.gene074111:CDS |
| ATGATATCAAAGACATGGAA+TGG | 0.537539 | 6.1:+6795785 | None:intergenic |
| CTTATTATCGTCGCCTTCGG+TGG | 0.537805 | 6.1:-6794375 | MS.gene074111:CDS |
| GCTGAGATTGAGGTGGAAGA+TGG | 0.539723 | 6.1:-6795709 | MS.gene074111:CDS |
| GATTCATTTGCATATGGCTG+AGG | 0.541130 | 6.1:+6795631 | None:intergenic |
| TACCCCTGCTACCGAAGCTC+AGG | 0.543312 | 6.1:-6794708 | MS.gene074111:intron |
| ATAATAATGTAGATCAGAGA+AGG | 0.546231 | 6.1:-6794815 | MS.gene074111:intron |
| ACAGTCTGAACAGAGATGGC+TGG | 0.550214 | 6.1:-6800246 | None:intergenic |
| TTACACAGAAGAAGAGGTAA+AGG | 0.552168 | 6.1:-6795740 | MS.gene074111:CDS |
| GAATATACCGAAATACCAGC+AGG | 0.552545 | 6.1:+6795410 | None:intergenic |
| TACAATCCTTATTTCCCTGG+TGG | 0.554688 | 6.1:-6794785 | MS.gene074111:CDS |
| AAGCGATCACTGAGTTTACC+GGG | 0.554889 | 6.1:+6795655 | None:intergenic |
| TCGCATCTCCACACTATCCA+TGG | 0.559094 | 6.1:-6796769 | MS.gene074111:CDS |
| TGTTCTTAAGTCTCGCAAGT+TGG | 0.563450 | 6.1:-6794350 | MS.gene074111:CDS |
| AAGACTTAGATCAGGAGGAT+AGG | 0.563590 | 6.1:+6795582 | None:intergenic |
| AGGATTCCCTCGTGAGGCCA+TGG | 0.566894 | 6.1:+6796752 | None:intergenic |
| ATCATTAAGCATCTTAGGCA+TGG | 0.575465 | 6.1:+6794754 | None:intergenic |
| ATGCAAATGAATCAGCTGCT+AGG | 0.576296 | 6.1:-6795621 | MS.gene074111:CDS |
| GGTGAGATGTTTACACGCCC+CGG | 0.579989 | 6.1:-6795673 | MS.gene074111:CDS |
| CACCAGCTCCAATTAAAGCA+AGG | 0.593167 | 6.1:+6796849 | None:intergenic |
| TCAGCTGATGAAGCTGAGCA+TGG | 0.598104 | 6.1:-6796794 | MS.gene074111:CDS |
| GTAATAAGACTTAGATCAGG+AGG | 0.606361 | 6.1:+6795577 | None:intergenic |
| ACCAGCTCCAATTAAAGCAA+GGG | 0.607014 | 6.1:+6796850 | None:intergenic |
| TGTTGCTTACACAGAAGAAG+AGG | 0.612813 | 6.1:-6795746 | MS.gene074111:CDS |
| TCGTGAGGCCATGGATAGTG+TGG | 0.617512 | 6.1:+6796761 | None:intergenic |
| ATATCATACCGTGATTTGGT+TGG | 0.618625 | 6.1:-6795769 | MS.gene074111:CDS |
| AAGCATCTTAGGCATGGCAA+TGG | 0.619124 | 6.1:+6794760 | None:intergenic |
| GAGACAATGGATGATACAGA+AGG | 0.620313 | 6.1:+6796917 | None:intergenic |
| TACCTGAGCTTCGGTAGCAG+GGG | 0.625058 | 6.1:+6794706 | None:intergenic |
| GGCGCTGTTGAATATGAAGA+TGG | 0.625884 | 6.1:-6794731 | MS.gene074111:CDS |
| ACACTATCCATGGCCTCACG+AGG | 0.626043 | 6.1:-6796759 | MS.gene074111:CDS |
| ACGGTATGATATCAAAGACA+TGG | 0.629932 | 6.1:+6795780 | None:intergenic |
| ATGCCTAAGATGCTTAATGA+TGG | 0.630986 | 6.1:-6794752 | MS.gene074111:CDS |
| GGAAGATGGCCCCAATGATG+AGG | 0.644119 | 6.1:-6795695 | MS.gene074111:CDS |
| GCTGCTAGGTTTGCTAATGG+AGG | 0.646946 | 6.1:-6795607 | MS.gene074111:CDS |
| AATATACCGAAATACCAGCA+GGG | 0.651584 | 6.1:+6795411 | None:intergenic |
| ATATACCGAAATACCAGCAG+GGG | 0.655558 | 6.1:+6795412 | None:intergenic |
| AAGCAACACCAACCAAATCA+CGG | 0.657890 | 6.1:+6795761 | None:intergenic |
| ATGGATAGTGTGGAGATGCG+AGG | 0.659382 | 6.1:+6796771 | None:intergenic |
| GTCTGAACAGAGATGGCTGG+AGG | 0.660770 | 6.1:-6800243 | None:intergenic |
| CACTATCCATGGCCTCACGA+GGG | 0.662222 | 6.1:-6796758 | MS.gene074111:CDS |
| GAAGATGGCCCCAATGATGA+GGG | 0.664245 | 6.1:-6795694 | MS.gene074111:CDS |
| ACATCTCACCCTCATCATTG+GGG | 0.664508 | 6.1:+6795686 | None:intergenic |
| ACTTAAGAACAGACCACCGA+AGG | 0.669689 | 6.1:+6794362 | None:intergenic |
| GTGTATAAACTTGATGACCA+CGG | 0.686663 | 6.1:+6795824 | None:intergenic |
| TATACCGAAATACCAGCAGG+GGG | 0.699409 | 6.1:+6795413 | None:intergenic |
| AAGCGTGATCATATGAACTG+AGG | 0.699683 | 6.1:+6796732 | None:intergenic |
| TATGGCAGCTGAGATTGAGG+TGG | 0.700807 | 6.1:-6795716 | MS.gene074111:CDS |
| GCATGGCAATGGCTCCACCA+GGG | 0.715609 | 6.1:+6794771 | None:intergenic |
| GAACTGAGGATTCCCTCGTG+AGG | 0.723147 | 6.1:+6796746 | None:intergenic |
| AGCGATCACTGAGTTTACCG+GGG | 0.742025 | 6.1:+6795656 | None:intergenic |
| TGTATGAACAGGATTCGCCG+TGG | 0.760844 | 6.1:-6795841 | MS.gene074111:intron |
| ATACCGAAATACCAGCAGGG+GGG | 0.810875 | 6.1:+6795414 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATTTGAAAATGAA+AGG | - | chr6.1:6794879-6794898 | MS.gene074111:intron | 10.0% |
| !! | GTATTATTTATAGAAATAAA+AGG | + | chr6.1:6798554-6798573 | None:intergenic | 10.0% |
| !!! | AAAAAATATATTTTGCATTT+TGG | - | chr6.1:6796529-6796548 | MS.gene074111:intron | 10.0% |
| !!! | AGTATTAATATTTATTTTTG+CGG | + | chr6.1:6796269-6796288 | None:intergenic | 10.0% |
| !! | AGAATAAATTTAAACTCTAA+AGG | + | chr6.1:6796039-6796058 | None:intergenic | 15.0% |
| !! | ATATTAATATTACACAAACA+CGG | + | chr6.1:6796472-6796491 | None:intergenic | 15.0% |
| !! | TAATAATTATCTATCAACTT+AGG | - | chr6.1:6799924-6799943 | MS.gene074111:intron | 15.0% |
| !! | TTAATACTATAAATAGGAAT+CGG | - | chr6.1:6796078-6796097 | MS.gene074111:intron | 15.0% |
| !!! | ACGATTATTTTTTATTGTTA+TGG | - | chr6.1:6797508-6797527 | MS.gene074111:intron | 15.0% |
| !!! | ATTATTTTTTATTGTTATGG+TGG | - | chr6.1:6797511-6797530 | MS.gene074111:intron | 15.0% |
| !!! | CTAATTTTATACGTAATTAT+GGG | + | chr6.1:6795534-6795553 | None:intergenic | 15.0% |
| !!! | GCATTAAATATTTTACAAAT+TGG | + | chr6.1:6799372-6799391 | None:intergenic | 15.0% |
| !! | AAACAACATCCAAATATATT+CGG | + | chr6.1:6796178-6796197 | None:intergenic | 20.0% |
| !! | AATAAGCTTATAATGAAAGA+TGG | + | chr6.1:6797467-6797486 | None:intergenic | 20.0% |
| !! | AATAATAAACTAGTAATGCA+AGG | + | chr6.1:6794770-6794789 | None:intergenic | 20.0% |
| !! | ACTGAAAAAAATTAGGTAAT+TGG | - | chr6.1:6795611-6795630 | MS.gene074111:CDS | 20.0% |
| !! | AGAATAAAACAAAGCAATAA+AGG | + | chr6.1:6798587-6798606 | None:intergenic | 20.0% |
| !! | AGTTCAGATTAAATATATGA+TGG | + | chr6.1:6798646-6798665 | None:intergenic | 20.0% |
| !! | ATAATAAACTAGTAATGCAA+GGG | + | chr6.1:6794769-6794788 | None:intergenic | 20.0% |
| !! | ATTAGGTTCTATCATTTAAT+GGG | - | chr6.1:6794994-6795013 | MS.gene074111:intron | 20.0% |
| !! | CAAAACAAAACAAAACAATT+TGG | + | chr6.1:6795039-6795058 | None:intergenic | 20.0% |
| !! | CCATAATTACGTATAAAATT+AGG | - | chr6.1:6795532-6795551 | MS.gene074111:intron | 20.0% |
| !! | CTGAAAAAAATTAGGTAATT+GGG | - | chr6.1:6795612-6795631 | MS.gene074111:CDS | 20.0% |
| !! | GCTGAAAAAAATTAAAACTA+GGG | + | chr6.1:6798017-6798036 | None:intergenic | 20.0% |
| !! | GTATGTTTAAGCAAAATAAA+AGG | + | chr6.1:6797900-6797919 | None:intergenic | 20.0% |
| !! | TATTTGATGTTTATGTAATC+TGG | - | chr6.1:6798606-6798625 | MS.gene074111:intron | 20.0% |
| !! | TGGTTAAAAACTTAAAATCT+TGG | - | chr6.1:6798096-6798115 | MS.gene074111:intron | 20.0% |
| !! | TTCAATATAATACTTTCATG+TGG | - | chr6.1:6799477-6799496 | MS.gene074111:intron | 20.0% |
| !! | TTCATACTATATAAAACCTA+AGG | + | chr6.1:6799041-6799060 | None:intergenic | 20.0% |
| !!! | ATGTGATTTTTATTTTGGAT+CGG | - | chr6.1:6796645-6796664 | MS.gene074111:intron | 20.0% |
| !!! | ATTTTAAATCCCATAAGATA+AGG | + | chr6.1:6794451-6794470 | None:intergenic | 20.0% |
| !!! | CATTTAAAAGCACAATTTTT+TGG | + | chr6.1:6799282-6799301 | None:intergenic | 20.0% |
| !!! | CCTAATTTTATACGTAATTA+TGG | + | chr6.1:6795535-6795554 | None:intergenic | 20.0% |
| !!! | CTGTATTTAGTCTTAAAAAA+AGG | + | chr6.1:6799186-6799205 | None:intergenic | 20.0% |
| !!! | TAATATTTATTTTTGCGGTT+CGG | + | chr6.1:6796264-6796283 | None:intergenic | 20.0% |
| !!! | TATAAAAGTATCATGAATAG+AGG | + | chr6.1:6794403-6794422 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAACTACTTAGTA+TGG | - | chr6.1:6795492-6795511 | MS.gene074111:intron | 20.0% |
| ! | AATTGTCCAAAAAAAAACGA+AGG | + | chr6.1:6797877-6797896 | None:intergenic | 25.0% |
| ! | AGTAGTTAAAAAAGATCATG+AGG | + | chr6.1:6795487-6795506 | None:intergenic | 25.0% |
| ! | ATAAAATGCTAGATTAGTGA+AGG | + | chr6.1:6795356-6795375 | None:intergenic | 25.0% |
| ! | ATAATAATGTAGATCAGAGA+AGG | - | chr6.1:6799746-6799765 | MS.gene074111:intron | 25.0% |
| ! | ATATAATACTTTCATGTGGA+TGG | - | chr6.1:6799481-6799500 | MS.gene074111:intron | 25.0% |
| ! | ATGGATATTTGTACTTTCAT+TGG | - | chr6.1:6800148-6800167 | MS.gene074111:intron | 25.0% |
| ! | ATTATATCTATGACTGTTAG+AGG | + | chr6.1:6794741-6794760 | None:intergenic | 25.0% |
| ! | ATTGTAATTGTAGTCATGAT+AGG | + | chr6.1:6795214-6795233 | None:intergenic | 25.0% |
| ! | CAAATATATGCGGTTTAATT+TGG | + | chr6.1:6796571-6796590 | None:intergenic | 25.0% |
| ! | CAAATTAAACCGCATATATT+TGG | - | chr6.1:6796569-6796588 | MS.gene074111:intron | 25.0% |
| ! | CAACAGTTTAACTGATAAAT+TGG | + | chr6.1:6794633-6794652 | None:intergenic | 25.0% |
| ! | CAATTTATCAGTTAAACTGT+TGG | - | chr6.1:6794631-6794650 | MS.gene074111:intron | 25.0% |
| ! | CATTAAATGATAGAACCTAA+TGG | + | chr6.1:6794995-6795014 | None:intergenic | 25.0% |
| ! | CATTAGGTTCTATCATTTAA+TGG | - | chr6.1:6794993-6795012 | MS.gene074111:intron | 25.0% |
| ! | GGCTGAAAAAAATTAAAACT+AGG | + | chr6.1:6798018-6798037 | None:intergenic | 25.0% |
| ! | TATTGAAAGAAAGTCATCTA+TGG | + | chr6.1:6799421-6799440 | None:intergenic | 25.0% |
| ! | TCAGATTAAATATATGATGG+AGG | + | chr6.1:6798643-6798662 | None:intergenic | 25.0% |
| ! | TCCAAAATAAAAATCACATG+CGG | + | chr6.1:6796644-6796663 | None:intergenic | 25.0% |
| ! | TGTCTTAATTTACTCTCAAA+TGG | - | chr6.1:6795103-6795122 | MS.gene074111:intron | 25.0% |
| ! | TTAAGAGAAATAGAGAAAGT+GGG | - | chr6.1:6798382-6798401 | MS.gene074111:intron | 25.0% |
| ! | TTATATCTATGACTGTTAGA+GGG | + | chr6.1:6794740-6794759 | None:intergenic | 25.0% |
| !! | AATCCATCTAAAGTTAAACT+TGG | + | chr6.1:6797368-6797387 | None:intergenic | 25.0% |
| !! | ATGATACTTTTATACTTGTG+AGG | - | chr6.1:6794409-6794428 | MS.gene074111:CDS | 25.0% |
| !! | TATCCAAGTTTAACTTTAGA+TGG | - | chr6.1:6797362-6797381 | MS.gene074111:intron | 25.0% |
| !! | TGATACTTTTATACTTGTGA+GGG | - | chr6.1:6794410-6794429 | MS.gene074111:CDS | 25.0% |
| !!! | GTAAATTCTTTTGATTGTTC+AGG | - | chr6.1:6796752-6796771 | MS.gene074111:CDS | 25.0% |
| !!! | GTGTTTTTCAACAATTATTG+AGG | - | chr6.1:6794340-6794359 | MS.gene074111:CDS | 25.0% |
| !!! | GTTTTTCCTTCGTTTTTTTT+TGG | - | chr6.1:6797868-6797887 | MS.gene074111:intron | 25.0% |
| !!! | TACCTAATTTTTTTCAGTCA+GGG | + | chr6.1:6795609-6795628 | None:intergenic | 25.0% |
| !!! | TTACCTAATTTTTTTCAGTC+AGG | + | chr6.1:6795610-6795629 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTTGTTGCAGAT+GGG | - | chr6.1:6799970-6799989 | MS.gene074111:intron | 25.0% |
| !!! | TTTTTCAACAATTATTGAGG+AGG | - | chr6.1:6794343-6794362 | MS.gene074111:CDS | 25.0% |
| AAAATTAGGTAATTGGGAGT+TGG | - | chr6.1:6795618-6795637 | MS.gene074111:CDS | 30.0% | |
| AAATTGTGCATTCAATGTCT+TGG | + | chr6.1:6795871-6795890 | None:intergenic | 30.0% | |
| AAGAATGCAAGTTACTGTAA+TGG | + | chr6.1:6799209-6799228 | None:intergenic | 30.0% | |
| AAGTCATCTATGGTATCAAA+AGG | + | chr6.1:6799411-6799430 | None:intergenic | 30.0% | |
| AATAAAAATCACATGCGGTT+CGG | + | chr6.1:6796639-6796658 | None:intergenic | 30.0% | |
| ACTATAAATAGGAATCGGTA+GGG | - | chr6.1:6796083-6796102 | MS.gene074111:intron | 30.0% | |
| AGAAGATACTAGATTAGTAG+CGG | + | chr6.1:6795460-6795479 | None:intergenic | 30.0% | |
| AGAGAACATTAGTTCCTTTA+AGG | - | chr6.1:6798484-6798503 | MS.gene074111:intron | 30.0% | |
| ATGATATCAAAGACATGGAA+TGG | + | chr6.1:6798779-6798798 | None:intergenic | 30.0% | |
| CACAAACACGGTAAAATAAT+AGG | + | chr6.1:6796460-6796479 | None:intergenic | 30.0% | |
| CGCAAAAAACCGAATATATT+TGG | - | chr6.1:6796166-6796185 | MS.gene074111:intron | 30.0% | |
| CTAAAGTAACATGATTTCGA+GGG | + | chr6.1:6797140-6797159 | None:intergenic | 30.0% | |
| CTGATAGAAGACGAAAATAA+AGG | + | chr6.1:6800065-6800084 | None:intergenic | 30.0% | |
| GAAACATTAATATTGTGTGC+TGG | + | chr6.1:6799524-6799543 | None:intergenic | 30.0% | |
| GAATTAAGCTTGATCATAGT+TGG | + | chr6.1:6794942-6794961 | None:intergenic | 30.0% | |
| GATTAGAAAAAGACATGATC+AGG | + | chr6.1:6797600-6797619 | None:intergenic | 30.0% | |
| GCAGAAAATTGACATTACTT+TGG | + | chr6.1:6799009-6799028 | None:intergenic | 30.0% | |
| GGATTAATGTCACAATACTT+TGG | - | chr6.1:6794652-6794671 | MS.gene074111:intron | 30.0% | |
| GTTAAGAGAAATAGAGAAAG+TGG | - | chr6.1:6798381-6798400 | MS.gene074111:intron | 30.0% | |
| GTTCTATCATTTAATGGGAT+TGG | - | chr6.1:6794999-6795018 | MS.gene074111:intron | 30.0% | |
| TAAAATAGACATACTGTTGC+TGG | + | chr6.1:6795417-6795436 | None:intergenic | 30.0% | |
| TAAACCGCATATATTTGGAT+CGG | - | chr6.1:6796574-6796593 | MS.gene074111:intron | 30.0% | |
| TACTATAAATAGGAATCGGT+AGG | - | chr6.1:6796082-6796101 | MS.gene074111:intron | 30.0% | |
| TATACGTAATTATGGGTGAA+AGG | + | chr6.1:6795527-6795546 | None:intergenic | 30.0% | |
| TATATCTATGACTGTTAGAG+GGG | + | chr6.1:6794739-6794758 | None:intergenic | 30.0% | |
| TCAACAAGCATTATAAGACA+AGG | + | chr6.1:6794594-6794613 | None:intergenic | 30.0% | |
| TTGACAAGAATACAAAGTTG+AGG | + | chr6.1:6799634-6799653 | None:intergenic | 30.0% | |
| TTGTAGAGATGCAAATCATA+AGG | + | chr6.1:6795190-6795209 | None:intergenic | 30.0% | |
| TTTCTGCTAGTAATTTCCTT+AGG | - | chr6.1:6799022-6799041 | MS.gene074111:intron | 30.0% | |
| TTTGATATCATACCGTGATT+TGG | - | chr6.1:6798788-6798807 | MS.gene074111:intron | 30.0% | |
| TTTGTAAAAACCGCTAAGAT+CGG | - | chr6.1:6796196-6796215 | MS.gene074111:intron | 30.0% | |
| TTTGTATTCTTGTCAAGTCT+CGG | - | chr6.1:6799638-6799657 | MS.gene074111:intron | 30.0% | |
| ! | AAATCAGAAGTTGTCTTTTC+TGG | - | chr6.1:6794534-6794553 | MS.gene074111:CDS | 30.0% |
| ! | AAGGAATTTGTGTTATTGAG+TGG | - | chr6.1:6798418-6798437 | MS.gene074111:intron | 30.0% |
| ! | AATTTTGCAAAAGAGTTTCC+AGG | - | chr6.1:6794711-6794730 | MS.gene074111:CDS | 30.0% |
| ! | ATAGGACTCATCCTATTTTA+AGG | - | chr6.1:6798220-6798239 | MS.gene074111:intron | 30.0% |
| ! | ATGTTTCTGACCTTATCTTA+TGG | - | chr6.1:6794438-6794457 | MS.gene074111:intron | 30.0% |
| ! | ATTGCCATTGATTGTCATAT+TGG | - | chr6.1:6797484-6797503 | MS.gene074111:intron | 30.0% |
| ! | ATTTTACAAATTGGTGTGCA+GGG | + | chr6.1:6799363-6799382 | None:intergenic | 30.0% |
| ! | CAAAACCATGAAAGCATAAT+AGG | + | chr6.1:6798058-6798077 | None:intergenic | 30.0% |
| ! | GATTTAAAATTGAGACCCTT+AGG | - | chr6.1:6794461-6794480 | MS.gene074111:intron | 30.0% |
| ! | TATTTTACAAATTGGTGTGC+AGG | + | chr6.1:6799364-6799383 | None:intergenic | 30.0% |
| ! | TCTAAAGTAACATGATTTCG+AGG | + | chr6.1:6797141-6797160 | None:intergenic | 30.0% |
| ! | TGTTTCTGACCTTATCTTAT+GGG | - | chr6.1:6794439-6794458 | MS.gene074111:intron | 30.0% |
| ! | TTACCATAGTCTAGTAGTTT+TGG | - | chr6.1:6795250-6795269 | MS.gene074111:intron | 30.0% |
| ! | TTGGTAATAAGACTTAGATC+AGG | + | chr6.1:6798990-6799009 | None:intergenic | 30.0% |
| ! | TTGTGCTTTTAAATGTTGTG+TGG | - | chr6.1:6799287-6799306 | MS.gene074111:intron | 30.0% |
| ! | TTTGCGATTTTCGGTTTTTT+TGG | + | chr6.1:6796152-6796171 | None:intergenic | 30.0% |
| ! | TTTTATAACAATGTGTCCCT+CGG | - | chr6.1:6797569-6797588 | MS.gene074111:intron | 30.0% |
| !! | AATTCTTTTGATTGTTCAGG+TGG | - | chr6.1:6796755-6796774 | MS.gene074111:CDS | 30.0% |
| !! | ACCGCATGTGATTTTTATTT+TGG | - | chr6.1:6796640-6796659 | MS.gene074111:intron | 30.0% |
| !! | ATATGCGGTTTAATTTGGAT+CGG | + | chr6.1:6796566-6796585 | None:intergenic | 30.0% |
| !! | ATTATGCTTTCATGGTTTTG+AGG | - | chr6.1:6798058-6798077 | MS.gene074111:intron | 30.0% |
| !! | CAAATCATAAGGTATTGCTA+CGG | + | chr6.1:6795179-6795198 | None:intergenic | 30.0% |
| !! | GTAAATTCTTTTGACTGTTC+AGG | - | chr6.1:6797021-6797040 | MS.gene074111:intron | 30.0% |
| !! | GTTTTGTTATACATATGCGA+GGG | - | chr6.1:6794511-6794530 | MS.gene074111:intron | 30.0% |
| !! | TGTTCTAGAGTAACATGATT+TGG | + | chr6.1:6795991-6796010 | None:intergenic | 30.0% |
| !! | TTAGCTGATTTTGTATGAAC+AGG | - | chr6.1:6798709-6798728 | MS.gene074111:intron | 30.0% |
| !! | TTTATTTGTTGTTGCAGATG+GGG | - | chr6.1:6799971-6799990 | MS.gene074111:intron | 30.0% |
| !!! | ATCAGTTTGCGGTTTTATTT+TGG | + | chr6.1:6796129-6796148 | None:intergenic | 30.0% |
| !!! | ATGTTGTGTCATTTTTGTCT+TGG | - | chr6.1:6799998-6800017 | MS.gene074111:intron | 30.0% |
| !!! | ATTCGGTTTTTTGCGATTTT+CGG | + | chr6.1:6796161-6796180 | None:intergenic | 30.0% |
| !!! | CTATTTTAAGGCTTTCTTCT+GGG | - | chr6.1:6798232-6798251 | MS.gene074111:intron | 30.0% |
| !!! | CTTTTATTTGTTGTTGCAGA+TGG | - | chr6.1:6799969-6799988 | MS.gene074111:intron | 30.0% |
| !!! | GTTTAATTTGGATCGGTTTT+TGG | + | chr6.1:6796559-6796578 | None:intergenic | 30.0% |
| !!! | GTTTTAATTTTTTTCAGCCG+TGG | - | chr6.1:6798019-6798038 | MS.gene074111:intron | 30.0% |
| !!! | TGTTGTGTCATTTTTGTCTT+GGG | - | chr6.1:6799999-6800018 | MS.gene074111:intron | 30.0% |
| !!! | TTTGCGGTTTTATTTTGGAT+CGG | + | chr6.1:6796124-6796143 | None:intergenic | 30.0% |
| AAAACTGTGCAAGCTACAAA+TGG | + | chr6.1:6795290-6795309 | None:intergenic | 35.0% | |
| AACTCAGTTGTAGTACTAAG+AGG | + | chr6.1:6797417-6797436 | None:intergenic | 35.0% | |
| AAGCCAAAACTACTAGACTA+TGG | + | chr6.1:6795256-6795275 | None:intergenic | 35.0% | |
| AATATACCGAAATACCAGCA+GGG | + | chr6.1:6799153-6799172 | None:intergenic | 35.0% | |
| AATTAAAGCAAGGGCTCTTA+AGG | + | chr6.1:6797705-6797724 | None:intergenic | 35.0% | |
| ACATCAGTTGTATAGGTTCA+TGG | - | chr6.1:6798344-6798363 | MS.gene074111:intron | 35.0% | |
| ACGGTATGATATCAAAGACA+TGG | + | chr6.1:6798784-6798803 | None:intergenic | 35.0% | |
| AGTTAGCACATCAGTTGTAT+AGG | - | chr6.1:6798337-6798356 | MS.gene074111:intron | 35.0% | |
| ATCATTAAGCATCTTAGGCA+TGG | + | chr6.1:6799810-6799829 | None:intergenic | 35.0% | |
| ATGCCTAAGATGCTTAATGA+TGG | - | chr6.1:6799809-6799828 | MS.gene074111:intron | 35.0% | |
| ATTCTTCAGAAGTTGTCATG+TGG | - | chr6.1:6799223-6799242 | MS.gene074111:intron | 35.0% | |
| CACTTATGATCACAAATGCA+AGG | + | chr6.1:6797939-6797958 | None:intergenic | 35.0% | |
| CCAGAAGAAAGCCTTAAAAT+AGG | + | chr6.1:6798234-6798253 | None:intergenic | 35.0% | |
| CGTTCCAATATGACAATCAA+TGG | + | chr6.1:6797491-6797510 | None:intergenic | 35.0% | |
| CTAGCAAATATCGCAATACA+TGG | + | chr6.1:6798156-6798175 | None:intergenic | 35.0% | |
| CTATAAATAGGAATCGGTAG+GGG | - | chr6.1:6796084-6796103 | MS.gene074111:intron | 35.0% | |
| CTCCCTGACTGAAAAAAATT+AGG | - | chr6.1:6795604-6795623 | MS.gene074111:CDS | 35.0% | |
| CTGTCAATCATGCACATATA+TGG | - | chr6.1:6799574-6799593 | MS.gene074111:intron | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | - | chr6.1:6795915-6795934 | MS.gene074111:intron | 35.0% | |
| CTTGCATTTGTGATCATAAG+TGG | - | chr6.1:6797937-6797956 | MS.gene074111:intron | 35.0% | |
| GCATTTATAGATCCTGTGAT+AGG | - | chr6.1:6798202-6798221 | MS.gene074111:intron | 35.0% | |
| GTAATAAGACTTAGATCAGG+AGG | + | chr6.1:6798987-6799006 | None:intergenic | 35.0% | |
| GTCTTCCTATTATGCTTTCA+TGG | - | chr6.1:6798050-6798069 | MS.gene074111:intron | 35.0% | |
| TACTACAATGATCACACCTA+GGG | + | chr6.1:6796715-6796734 | None:intergenic | 35.0% | |
| TAGTACTACAACTGAGTTCT+TGG | - | chr6.1:6797419-6797438 | MS.gene074111:intron | 35.0% | |
| TCTCAAATGGTCGTTATCAA+GGG | - | chr6.1:6795116-6795135 | MS.gene074111:intron | 35.0% | |
| TGATCAAGCTTAATTCCGTT+AGG | - | chr6.1:6794946-6794965 | MS.gene074111:intron | 35.0% | |
| TGGTTGTCAAAGTCAACTAT+AGG | - | chr6.1:6797957-6797976 | MS.gene074111:intron | 35.0% | |
| TTAAGAGCCCTTGCTTTAAT+TGG | - | chr6.1:6797704-6797723 | MS.gene074111:intron | 35.0% | |
| TTACACAGAAGAAGAGGTAA+AGG | - | chr6.1:6798821-6798840 | MS.gene074111:intron | 35.0% | |
| TTCTTACCAGAGAATGAGAT+TGG | + | chr6.1:6794374-6794393 | None:intergenic | 35.0% | |
| ! | CATTACAATCCTTATTTCCC+TGG | - | chr6.1:6799773-6799792 | MS.gene074111:intron | 35.0% |
| ! | CTAGAGTAACATGATTTGGA+GGG | + | chr6.1:6795987-6796006 | None:intergenic | 35.0% |
| ! | GTGTATAAACTTGATGACCA+CGG | + | chr6.1:6798740-6798759 | None:intergenic | 35.0% |
| ! | TCTAGAGTAACATGATTTGG+AGG | + | chr6.1:6795988-6796007 | None:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr6.1:6795932-6795951 | None:intergenic | 35.0% |
| !! | AATTCTTTTGACTGTTCAGG+TGG | - | chr6.1:6797024-6797043 | MS.gene074111:intron | 35.0% |
| !! | ACATAAAAGTACCTGAGCTT+CGG | + | chr6.1:6799867-6799886 | None:intergenic | 35.0% |
| !! | ACTGTCTTTCTTTGAGACAA+TGG | + | chr6.1:6797660-6797679 | None:intergenic | 35.0% |
| !! | ATATCATACCGTGATTTGGT+TGG | - | chr6.1:6798792-6798811 | MS.gene074111:intron | 35.0% |
| !!! | CCTATTTTAAGGCTTTCTTC+TGG | - | chr6.1:6798231-6798250 | MS.gene074111:intron | 35.0% |
| !!! | CTAATTTTTTTCAGTCAGGG+AGG | + | chr6.1:6795606-6795625 | None:intergenic | 35.0% |
| !!! | GGTTTTATTTTGGATCGGTT+TGG | + | chr6.1:6796119-6796138 | None:intergenic | 35.0% |
| !!! | GGTTTTGTTATACATATGCG+AGG | - | chr6.1:6794510-6794529 | MS.gene074111:intron | 35.0% |
| !!! | GGTTTTTTTGGATCAGTTTG+CGG | + | chr6.1:6796140-6796159 | None:intergenic | 35.0% |
| !!! | TGTGTTTGTGAGTTGGTTTT+TGG | + | chr6.1:6796900-6796919 | None:intergenic | 35.0% |
| !!! | TTTATTTTTGCGGTTCGGTT+CGG | + | chr6.1:6796259-6796278 | None:intergenic | 35.0% |
| AAAAACCGCTAAGATCGGAT+CGG | - | chr6.1:6796201-6796220 | MS.gene074111:intron | 40.0% | |
| AAACATCTCACCCTCATCAT+TGG | + | chr6.1:6798880-6798899 | None:intergenic | 40.0% | |
| AAAGCGATCACTGAGTTTAC+CGG | + | chr6.1:6798910-6798929 | None:intergenic | 40.0% | |
| AAATTGCTTGACCACCTGAT+GGG | - | chr6.1:6799246-6799265 | MS.gene074111:intron | 40.0% | |
| AACATCTCACCCTCATCATT+GGG | + | chr6.1:6798879-6798898 | None:intergenic | 40.0% | |
| AAGACTTAGATCAGGAGGAT+AGG | + | chr6.1:6798982-6799001 | None:intergenic | 40.0% | |
| AAGCAACACCAACCAAATCA+CGG | + | chr6.1:6798803-6798822 | None:intergenic | 40.0% | |
| AAGCGTGATCATATGAACTG+AGG | + | chr6.1:6797832-6797851 | None:intergenic | 40.0% | |
| AATAGGATGAGTCCTATCAC+AGG | + | chr6.1:6798217-6798236 | None:intergenic | 40.0% | |
| ACCAGCTCCAATTAAAGCAA+GGG | + | chr6.1:6797714-6797733 | None:intergenic | 40.0% | |
| ACTACAATGATCACACCTAG+GGG | + | chr6.1:6796714-6796733 | None:intergenic | 40.0% | |
| ACTTGCAGATGGGATTCAAA+TGG | - | chr6.1:6800129-6800148 | MS.gene074111:intron | 40.0% | |
| AGAAGAAGAGGTAAAGGCTA+TGG | - | chr6.1:6798827-6798846 | MS.gene074111:intron | 40.0% | |
| AGTATTGTCACACGGATACA+AGG | + | chr6.1:6799693-6799712 | None:intergenic | 40.0% | |
| AGTGGGAAATGAATTGTGCA+AGG | - | chr6.1:6798399-6798418 | MS.gene074111:intron | 40.0% | |
| AGTTGTATAGGTTCATGGTG+TGG | - | chr6.1:6798349-6798368 | MS.gene074111:intron | 40.0% | |
| ATACTTTCATGTGGATGGCT+TGG | - | chr6.1:6799486-6799505 | MS.gene074111:intron | 40.0% | |
| ATATACCGAAATACCAGCAG+GGG | + | chr6.1:6799152-6799171 | None:intergenic | 40.0% | |
| ATGCAAATGAATCAGCTGCT+AGG | - | chr6.1:6798940-6798959 | MS.gene074111:intron | 40.0% | |
| CATAGAGCTAAGCTCCTTAA+AGG | + | chr6.1:6798501-6798520 | None:intergenic | 40.0% | |
| CATGCCAAAGAAAAAAGTGG+TGG | + | chr6.1:6795074-6795093 | None:intergenic | 40.0% | |
| CCACATGCCAAAGAAAAAAG+TGG | + | chr6.1:6795077-6795096 | None:intergenic | 40.0% | |
| CCTTAAGGCACAAGTTTAGA+AGG | + | chr6.1:6795917-6795936 | None:intergenic | 40.0% | |
| CCTTCTAAACTTGTGCCTTA+AGG | - | chr6.1:6795914-6795933 | MS.gene074111:intron | 40.0% | |
| CGAACCGATCCAAATATATG+CGG | + | chr6.1:6796581-6796600 | None:intergenic | 40.0% | |
| CGCATATATTTGGATCGGTT+CGG | - | chr6.1:6796579-6796598 | MS.gene074111:intron | 40.0% | |
| CTACTACAATGATCACACCT+AGG | + | chr6.1:6796716-6796735 | None:intergenic | 40.0% | |
| CTCTCAAATGGTCGTTATCA+AGG | - | chr6.1:6795115-6795134 | MS.gene074111:intron | 40.0% | |
| GAAACTCCAATCTCATTCTC+TGG | - | chr6.1:6794365-6794384 | MS.gene074111:CDS | 40.0% | |
| GAATATACCGAAATACCAGC+AGG | + | chr6.1:6799154-6799173 | None:intergenic | 40.0% | |
| GAGACAATGGATGATACAGA+AGG | + | chr6.1:6797647-6797666 | None:intergenic | 40.0% | |
| GATTCATTTGCATATGGCTG+AGG | + | chr6.1:6798933-6798952 | None:intergenic | 40.0% | |
| GCTAGTCATTTGATGCCATT+AGG | - | chr6.1:6794977-6794996 | MS.gene074111:intron | 40.0% | |
| GTCTCAAAGAAAGACAGTTC+CGG | - | chr6.1:6797662-6797681 | MS.gene074111:intron | 40.0% | |
| GTTATTGAGTGGAGAGAGAA+AGG | - | chr6.1:6798429-6798448 | MS.gene074111:intron | 40.0% | |
| TAGGAAGACTAGATTCTCCA+CGG | + | chr6.1:6798039-6798058 | None:intergenic | 40.0% | |
| TATCAAAGACATGGAATGGC+AGG | + | chr6.1:6798775-6798794 | None:intergenic | 40.0% | |
| TATGTGTTTGCTCTCCTAAC+TGG | - | chr6.1:6799115-6799134 | MS.gene074111:intron | 40.0% | |
| TCAAGAGCAGTATTGTCACA+CGG | + | chr6.1:6799701-6799720 | None:intergenic | 40.0% | |
| TCAAGCTTAATTCCGTTAGG+TGG | - | chr6.1:6794949-6794968 | MS.gene074111:intron | 40.0% | |
| TCGAGGGCTAAGTCTATATT+TGG | + | chr6.1:6797124-6797143 | None:intergenic | 40.0% | |
| TGAGGTGACATGATCTAACA+TGG | - | chr6.1:6798076-6798095 | MS.gene074111:intron | 40.0% | |
| TGTTCTTAAGTCTCGCAAGT+TGG | - | chr6.1:6800211-6800230 | MS.gene074111:CDS | 40.0% | |
| ! | AATTGGGAGTTGGATTTTGG+AGG | - | chr6.1:6795628-6795647 | MS.gene074111:CDS | 40.0% |
| ! | ATTGGGAGTTGGATTTTGGA+GGG | - | chr6.1:6795629-6795648 | MS.gene074111:CDS | 40.0% |
| ! | CTAAAGGTGTGTTTGTGAGT+TGG | + | chr6.1:6796907-6796926 | None:intergenic | 40.0% |
| ! | GCAGCTGATTCATTTGCATA+TGG | + | chr6.1:6798939-6798958 | None:intergenic | 40.0% |
| ! | GGTAATTGGGAGTTGGATTT+TGG | - | chr6.1:6795625-6795644 | MS.gene074111:CDS | 40.0% |
| ! | TACAATCCTTATTTCCCTGG+TGG | - | chr6.1:6799776-6799795 | MS.gene074111:intron | 40.0% |
| ! | TGTTGCTTACACAGAAGAAG+AGG | - | chr6.1:6798815-6798834 | MS.gene074111:intron | 40.0% |
| ! | TTCTTGTTTGCTCTACACCT+CGG | - | chr6.1:6798278-6798297 | MS.gene074111:intron | 40.0% |
| !! | ATATTTGGATCGGTTCGGTT+CGG | - | chr6.1:6796584-6796603 | MS.gene074111:intron | 40.0% |
| !! | CTTTAAGGAGCTTAGCTCTA+TGG | - | chr6.1:6798499-6798518 | MS.gene074111:intron | 40.0% |
| !! | GAGAGAGAAAGGTATCAAGA+GGG | - | chr6.1:6798440-6798459 | MS.gene074111:intron | 40.0% |
| !! | GGTACTTTTATGTGCTGATG+AGG | - | chr6.1:6799874-6799893 | MS.gene074111:intron | 40.0% |
| !!! | CCACTTTTTTCTTTGGCATG+TGG | - | chr6.1:6795074-6795093 | MS.gene074111:intron | 40.0% |
| !!! | CTGTCCACCACTTTTTTCTT+TGG | - | chr6.1:6795067-6795086 | MS.gene074111:intron | 40.0% |
| !!! | TGTGTTAGCGAGTTGGTTTT+TGG | + | chr6.1:6796016-6796035 | None:intergenic | 40.0% |
| !!! | TGTGTTTGCGAGTTGGTTTT+TGG | + | chr6.1:6797169-6797188 | None:intergenic | 40.0% |
| AAGCATCTTAGGCATGGCAA+TGG | + | chr6.1:6799804-6799823 | None:intergenic | 45.0% | |
| AAGCGATCACTGAGTTTACC+GGG | + | chr6.1:6798909-6798928 | None:intergenic | 45.0% | |
| ACAAATTGGTGTGCAGGGAA+AGG | + | chr6.1:6799358-6799377 | None:intergenic | 45.0% | |
| ACACTGCTACTACTTGCAGA+TGG | - | chr6.1:6800118-6800137 | MS.gene074111:intron | 45.0% | |
| ACATCTCACCCTCATCATTG+GGG | + | chr6.1:6798878-6798897 | None:intergenic | 45.0% | |
| ACATGATCAGGATCTTCCGA+GGG | + | chr6.1:6797588-6797607 | None:intergenic | 45.0% | |
| ACCCTTAGGCTAGACTTTGA+GGG | - | chr6.1:6794475-6794494 | MS.gene074111:intron | 45.0% | |
| ACTTAAGAACAGACCACCGA+AGG | + | chr6.1:6800202-6800221 | None:intergenic | 45.0% | |
| AGGGATCATGCAGTCTGTTA+GGG | - | chr6.1:6798459-6798478 | MS.gene074111:intron | 45.0% | |
| ATCCCTCAAAGTCTAGCCTA+AGG | + | chr6.1:6794480-6794499 | None:intergenic | 45.0% | |
| CAAATTGGTGTGCAGGGAAA+GGG | + | chr6.1:6799357-6799376 | None:intergenic | 45.0% | |
| CACCAGCTCCAATTAAAGCA+AGG | + | chr6.1:6797715-6797734 | None:intergenic | 45.0% | |
| CACTGCTACTACTTGCAGAT+GGG | - | chr6.1:6800119-6800138 | MS.gene074111:intron | 45.0% | |
| CTGCTTATTATCGTCGCCTT+CGG | - | chr6.1:6800183-6800202 | MS.gene074111:intron | 45.0% | |
| GAAAACCGATCCGATCTTAG+CGG | + | chr6.1:6796209-6796228 | None:intergenic | 45.0% | |
| GAAATTGCTTGACCACCTGA+TGG | - | chr6.1:6799245-6799264 | MS.gene074111:intron | 45.0% | |
| GACGAGCCTGAAAACACAAA+GGG | + | chr6.1:6799081-6799100 | None:intergenic | 45.0% | |
| GCGCCATCATTAAGCATCTT+AGG | + | chr6.1:6799815-6799834 | None:intergenic | 45.0% | |
| GGCGCTGTTGAATATGAAGA+TGG | - | chr6.1:6799830-6799849 | MS.gene074111:intron | 45.0% | |
| GTATAGGTTCATGGTGTGGA+GGG | - | chr6.1:6798353-6798372 | MS.gene074111:intron | 45.0% | |
| TATACCGAAATACCAGCAGG+GGG | + | chr6.1:6799151-6799170 | None:intergenic | 45.0% | |
| TCACGCTTCGTAAGTTTGAC+TGG | - | chr6.1:6797844-6797863 | MS.gene074111:intron | 45.0% | |
| TCCCTCAAAGTCTAGCCTAA+GGG | + | chr6.1:6794479-6794498 | None:intergenic | 45.0% | |
| TGACGAGCCTGAAAACACAA+AGG | + | chr6.1:6799082-6799101 | None:intergenic | 45.0% | |
| TGAGATGGAAGAGCGAAAAC+TGG | - | chr6.1:6800032-6800051 | MS.gene074111:intron | 45.0% | |
| TGAGTTCTTGGCTCCAATTC+TGG | - | chr6.1:6797431-6797450 | MS.gene074111:intron | 45.0% | |
| TGGCATGCAGTAACCAGAAT+TGG | + | chr6.1:6797447-6797466 | None:intergenic | 45.0% | |
| TGTATAGGTTCATGGTGTGG+AGG | - | chr6.1:6798352-6798371 | MS.gene074111:intron | 45.0% | |
| TTAAGGCTTTCTTCTGGGTC+AGG | - | chr6.1:6798237-6798256 | MS.gene074111:intron | 45.0% | |
| TTAATTGGAGCTGGTGTCTC+AGG | - | chr6.1:6797719-6797738 | MS.gene074111:intron | 45.0% | |
| ! | AGTTTTCGCTCTTCCATCTC+AGG | + | chr6.1:6800033-6800052 | None:intergenic | 45.0% |
| ! | CGTTTGCCCTTTGTGTTTTC+AGG | - | chr6.1:6799072-6799091 | MS.gene074111:intron | 45.0% |
| ! | CTAAAGGTGTGTTAGCGAGT+TGG | + | chr6.1:6796023-6796042 | None:intergenic | 45.0% |
| ! | CTAAAGGTGTGTTTGCGAGT+TGG | + | chr6.1:6797176-6797195 | None:intergenic | 45.0% |
| ! | TAGGCTAGACTTTGAGGGAT+GGG | - | chr6.1:6794480-6794499 | MS.gene074111:intron | 45.0% |
| ! | TTAGGCTAGACTTTGAGGGA+TGG | - | chr6.1:6794479-6794498 | MS.gene074111:intron | 45.0% |
| !! | AAATCACATGCGGTTCGGTT+CGG | + | chr6.1:6796634-6796653 | None:intergenic | 45.0% |
| !! | ATCCTTAACTTGTGCCCTAC+GGG | + | chr6.1:6795793-6795812 | None:intergenic | 45.0% |
| !! | CATGTTAACTTGTGCCCGTA+GGG | - | chr6.1:6795776-6795795 | MS.gene074111:CDS | 45.0% |
| !! | GACTAGCTTAGTCCACCTAA+CGG | + | chr6.1:6794964-6794983 | None:intergenic | 45.0% |
| !! | GATCCTTAACTTGTGCCCTA+CGG | + | chr6.1:6795794-6795813 | None:intergenic | 45.0% |
| !! | GATTTTGGAGGGGAATGCTT+TGG | - | chr6.1:6795640-6795659 | MS.gene074111:CDS | 45.0% |
| !! | GCTAAGATCGGATCGGTTTT+CGG | - | chr6.1:6796208-6796227 | MS.gene074111:intron | 45.0% |
| !! | GGAGAGAGAAAGGTATCAAG+AGG | - | chr6.1:6798439-6798458 | MS.gene074111:intron | 45.0% |
| !! | TAAGGTATTGCTACGGCATC+AGG | + | chr6.1:6795172-6795191 | None:intergenic | 45.0% |
| !! | TCAGCTGCTAGGTTTGCTAA+TGG | - | chr6.1:6798951-6798970 | MS.gene074111:intron | 45.0% |
| !! | TCATGTTAACTTGTGCCCGT+AGG | - | chr6.1:6795775-6795794 | MS.gene074111:CDS | 45.0% |
| !! | TGTTTTCAGGCTCGTCACAA+TGG | - | chr6.1:6799085-6799104 | MS.gene074111:intron | 45.0% |
| !! | TTGGGAGTTGGATTTTGGAG+GGG | - | chr6.1:6795630-6795649 | MS.gene074111:CDS | 45.0% |
| !!! | GTCATTTTTGTCTTGGGCAG+CGG | - | chr6.1:6800005-6800024 | MS.gene074111:intron | 45.0% |
| !! | ATATTTGATATTTAAAAAAA+GGG | + | chr6.1:6795956-6795975 | None:intergenic | 5.0% |
| !! | TATATTTGATATTTAAAAAA+AGG | + | chr6.1:6795957-6795976 | None:intergenic | 5.0% |
| !!! | AAATTTTTAATACTATAAAT+AGG | - | chr6.1:6796072-6796091 | MS.gene074111:intron | 5.0% |
| !!! | TGTAATTTTTTTTTTTTTAA+GGG | - | chr6.1:6795752-6795771 | MS.gene074111:CDS | 5.0% |
| !!! | TTGTAATTTTTTTTTTTTTA+AGG | - | chr6.1:6795751-6795770 | MS.gene074111:CDS | 5.0% |
| AAAGACAGTTCCGGCTCTAC+TGG | - | chr6.1:6797671-6797690 | MS.gene074111:intron | 50.0% | |
| AGCGATCACTGAGTTTACCG+GGG | + | chr6.1:6798908-6798927 | None:intergenic | 50.0% | |
| AGGAGCCTGAATGAGAAGGT+GGG | - | chr6.1:6798303-6798322 | MS.gene074111:intron | 50.0% | |
| ATACCGAAATACCAGCAGGG+GGG | + | chr6.1:6799150-6799169 | None:intergenic | 50.0% | |
| ATCAGGTGATGTGGATCGCA+TGG | + | chr6.1:6795155-6795174 | None:intergenic | 50.0% | |
| ATGACTGTTAGAGGGGAACC+TGG | + | chr6.1:6794732-6794751 | None:intergenic | 50.0% | |
| ATGGATAGTGTGGAGATGCG+AGG | + | chr6.1:6797793-6797812 | None:intergenic | 50.0% | |
| ATGGCTCCACCAGGGAAATA+AGG | + | chr6.1:6799785-6799804 | None:intergenic | 50.0% | |
| CAGGGAGGATTGACGAAGAT+TGG | + | chr6.1:6795591-6795610 | None:intergenic | 50.0% | |
| CTTATTATCGTCGCCTTCGG+TGG | - | chr6.1:6800186-6800205 | MS.gene074111:intron | 50.0% | |
| GAAGATGGCCCCAATGATGA+GGG | - | chr6.1:6798867-6798886 | MS.gene074111:intron | 50.0% | |
| GACATGATCAGGATCTTCCG+AGG | + | chr6.1:6797589-6797608 | None:intergenic | 50.0% | |
| GACCCTTAGGCTAGACTTTG+AGG | - | chr6.1:6794474-6794493 | MS.gene074111:intron | 50.0% | |
| GAGGGATCATGCAGTCTGTT+AGG | - | chr6.1:6798458-6798477 | MS.gene074111:intron | 50.0% | |
| GCCCTTGCTTTAATTGGAGC+TGG | - | chr6.1:6797710-6797729 | MS.gene074111:intron | 50.0% | |
| GCTGAGATTGAGGTGGAAGA+TGG | - | chr6.1:6798852-6798871 | MS.gene074111:intron | 50.0% | |
| GGATAGGAGCCTGAATGAGA+AGG | - | chr6.1:6798299-6798318 | MS.gene074111:intron | 50.0% | |
| GGGATCATGCAGTCTGTTAG+GGG | - | chr6.1:6798460-6798479 | MS.gene074111:intron | 50.0% | |
| GTTTGCTCTACACCTCGGAT+AGG | - | chr6.1:6798283-6798302 | MS.gene074111:intron | 50.0% | |
| TAGGAGCCTGAATGAGAAGG+TGG | - | chr6.1:6798302-6798321 | MS.gene074111:intron | 50.0% | |
| TATGGCAGCTGAGATTGAGG+TGG | - | chr6.1:6798845-6798864 | MS.gene074111:intron | 50.0% | |
| TCAGCTGATGAAGCTGAGCA+TGG | - | chr6.1:6797767-6797786 | MS.gene074111:intron | 50.0% | |
| TCGCATCTCCACACTATCCA+TGG | - | chr6.1:6797792-6797811 | MS.gene074111:intron | 50.0% | |
| TGTATGAACAGGATTCGCCG+TGG | - | chr6.1:6798720-6798739 | MS.gene074111:intron | 50.0% | |
| TTGAGCCCACCTTCTCATTC+AGG | + | chr6.1:6798311-6798330 | None:intergenic | 50.0% | |
| TTGGTTCCAAACCACCCATC+AGG | + | chr6.1:6799263-6799282 | None:intergenic | 50.0% | |
| ! | AGCTGGTGTCTCAGGTCTTT+TGG | - | chr6.1:6797727-6797746 | MS.gene074111:intron | 50.0% |
| ! | AGGCTAGACTTTGAGGGATG+GGG | - | chr6.1:6794481-6794500 | MS.gene074111:intron | 50.0% |
| ! | CTTTGAGGGATGGGGGATAA+TGG | - | chr6.1:6794489-6794508 | MS.gene074111:intron | 50.0% |
| ! | GCTGGTGTCTCAGGTCTTTT+GGG | - | chr6.1:6797728-6797747 | MS.gene074111:intron | 50.0% |
| ! | TTGGAGGGGAATGCTTTGGA+AGG | - | chr6.1:6795644-6795663 | MS.gene074111:CDS | 50.0% |
| !! | GCTGCTAGGTTTGCTAATGG+AGG | - | chr6.1:6798954-6798973 | MS.gene074111:intron | 50.0% |
| !! | TGCGGTTTGGATCGGTTTTG+AGG | + | chr6.1:6796682-6796701 | None:intergenic | 50.0% |
| !!! | TTTTGCGGTTCGGTTCGGTT+TGG | + | chr6.1:6796254-6796273 | None:intergenic | 50.0% |
| AAATACCAGCAGGGGGGTCA+CGG | + | chr6.1:6799144-6799163 | None:intergenic | 55.0% | |
| ACACTATCCATGGCCTCACG+AGG | - | chr6.1:6797802-6797821 | MS.gene074111:intron | 55.0% | |
| AGTACCTGAGCTTCGGTAGC+AGG | + | chr6.1:6799860-6799879 | None:intergenic | 55.0% | |
| CACTATCCATGGCCTCACGA+GGG | - | chr6.1:6797803-6797822 | MS.gene074111:intron | 55.0% | |
| CTCATTCAGGCTCCTATCCG+AGG | + | chr6.1:6798298-6798317 | None:intergenic | 55.0% | |
| GAACTGAGGATTCCCTCGTG+AGG | + | chr6.1:6797818-6797837 | None:intergenic | 55.0% | |
| GGAAGATGGCCCCAATGATG+AGG | - | chr6.1:6798866-6798885 | MS.gene074111:intron | 55.0% | |
| GGCTATGGCAGCTGAGATTG+AGG | - | chr6.1:6798842-6798861 | MS.gene074111:intron | 55.0% | |
| GGTGAGATGTTTACACGCCC+CGG | - | chr6.1:6798888-6798907 | MS.gene074111:intron | 55.0% | |
| GTACCTGAGCTTCGGTAGCA+GGG | + | chr6.1:6799859-6799878 | None:intergenic | 55.0% | |
| GTTCCAAACCACCCATCAGG+TGG | + | chr6.1:6799260-6799279 | None:intergenic | 55.0% | |
| TACCTGAGCTTCGGTAGCAG+GGG | + | chr6.1:6799858-6799877 | None:intergenic | 55.0% | |
| TCGTGAGGCCATGGATAGTG+TGG | + | chr6.1:6797803-6797822 | None:intergenic | 55.0% | |
| TGACCCCCCTGCTGGTATTT+CGG | - | chr6.1:6799144-6799163 | MS.gene074111:intron | 55.0% | |
| TGCCCGTAGGGCACAAGTTA+AGG | - | chr6.1:6795788-6795807 | MS.gene074111:CDS | 55.0% | |
| TGCTACGGCATCAGGTGATG+TGG | + | chr6.1:6795164-6795183 | None:intergenic | 55.0% | |
| TTGCTTGACCACCTGATGGG+TGG | - | chr6.1:6799249-6799268 | MS.gene074111:intron | 55.0% | |
| ! | GGCTAGACTTTGAGGGATGG+GGG | - | chr6.1:6794482-6794501 | MS.gene074111:intron | 55.0% |
| ! | TGACCACCTGATGGGTGGTT+TGG | - | chr6.1:6799254-6799273 | MS.gene074111:intron | 55.0% |
| !! | ACATGCGGTTCGGTTCGGTT+TGG | + | chr6.1:6796629-6796648 | None:intergenic | 55.0% |
| !! | ATCACACCTAGGGGTGTTCG+CGG | + | chr6.1:6796705-6796724 | None:intergenic | 55.0% |
| !! | CGGTTCGGTTCGGTTTGGTT+CGG | + | chr6.1:6796249-6796268 | None:intergenic | 55.0% |
| AGGATTCCCTCGTGAGGCCA+TGG | + | chr6.1:6797812-6797831 | None:intergenic | 60.0% | |
| GCATGGCAATGGCTCCACCA+GGG | + | chr6.1:6799793-6799812 | None:intergenic | 60.0% | |
| GGAACTGCTGCCAGTAGAGC+CGG | + | chr6.1:6797684-6797703 | None:intergenic | 60.0% | |
| GGGGGTCACGGTAACCAGTT+AGG | + | chr6.1:6799132-6799151 | None:intergenic | 60.0% | |
| TACCCCTGCTACCGAAGCTC+AGG | - | chr6.1:6799853-6799872 | MS.gene074111:intron | 60.0% | |
| TTGGGCAGCGGAACCTGAGA+TGG | - | chr6.1:6800017-6800036 | MS.gene074111:intron | 60.0% | |
| ! | GTTCGCGGTGCGGTTTGGAT+CGG | + | chr6.1:6796690-6796709 | None:intergenic | 60.0% |
| GGCATGGCAATGGCTCCACC+AGG | + | chr6.1:6799794-6799813 | None:intergenic | 65.0% | |
| !! | ACCTAGGGGTGTTCGCGGTG+CGG | + | chr6.1:6796700-6796719 | None:intergenic | 65.0% |
| ACCGCACCGCGAACACCCCT+AGG | - | chr6.1:6796696-6796715 | MS.gene074111:intron | 70.0% | |
| GGTTACCGTGACCCCCCTGC+TGG | - | chr6.1:6799136-6799155 | MS.gene074111:intron | 70.0% | |
| ! | GGGGTGTTCGCGGTGCGGTT+TGG | + | chr6.1:6796695-6796714 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 6794330 | 6800253 | 6794330 | ID=MS.gene074111 |
| chr6.1 | mRNA | 6794330 | 6800253 | 6794330 | ID=MS.gene074111.t1;Parent=MS.gene074111 |
| chr6.1 | exon | 6800197 | 6800253 | 6800197 | ID=MS.gene074111.t1.exon1;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6800197 | 6800253 | 6800197 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| chr6.1 | exon | 6796731 | 6796942 | 6796731 | ID=MS.gene074111.t1.exon2;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6796731 | 6796942 | 6796731 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| chr6.1 | exon | 6795573 | 6795852 | 6795573 | ID=MS.gene074111.t1.exon3;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6795573 | 6795852 | 6795573 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| chr6.1 | exon | 6795418 | 6795489 | 6795418 | ID=MS.gene074111.t1.exon4;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6795418 | 6795489 | 6795418 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| chr6.1 | exon | 6794709 | 6794825 | 6794709 | ID=MS.gene074111.t1.exon5;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6794709 | 6794825 | 6794709 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| chr6.1 | exon | 6794530 | 6794595 | 6794530 | ID=MS.gene074111.t1.exon6;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6794530 | 6794595 | 6794530 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| chr6.1 | exon | 6794330 | 6794446 | 6794330 | ID=MS.gene074111.t1.exon7;Parent=MS.gene074111.t1 |
| chr6.1 | CDS | 6794330 | 6794446 | 6794330 | ID=cds.MS.gene074111.t1;Parent=MS.gene074111.t1 |
| Gene Sequence |
| Protein sequence |
