Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033701.t1 | XP_003624483.2 | 99.2 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.00E+00 | 1642.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033701.t1 | Q9SIU2 | 63.5 | 864 | 297 | 5 | 1 | 862 | 1 | 848 | 0.0e+00 | 1111.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033701.t1 | G7KX77 | 99.2 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.0e+00 | 1642.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033701 | MS.gene23804 | PPI |
| MS.gene033701 | MS.gene066507 | PPI |
| MS.gene033701 | MS.gene27229 | PPI |
| MS.gene033701 | MS.gene017522 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033701.t1 | MTR_7g083840 | 99.190 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.0 | 1769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033701.t1 | AT2G13540 | 65.509 | 864 | 280 | 5 | 1 | 862 | 1 | 848 | 0.0 | 1182 |
Find 198 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAAAGATTGCTGATT+TGG | 0.191480 | 7.3:+24665388 | MS.gene033701:CDS |
| AATTCGCCTTATGTTCCTTC+TGG | 0.196266 | 7.3:+24661312 | MS.gene033701:CDS |
| AAGACATCCACTAGAGAATT+TGG | 0.210575 | 7.3:-24659309 | None:intergenic |
| TAGCTGAAGTCAGTTCTTTC+TGG | 0.211993 | 7.3:+24667484 | MS.gene033701:CDS |
| CCACTCCCAAACTGAGATTT+TGG | 0.224578 | 7.3:+24654796 | MS.gene033701:CDS |
| AAGAAATAACATCTCTTAAA+AGG | 0.247079 | 7.3:+24667975 | MS.gene033701:CDS |
| CCTCACAAGATTCCTTTCTA+TGG | 0.254169 | 7.3:+24655808 | MS.gene033701:CDS |
| GTTCCTTCTGGGGTATCTTT+TGG | 0.255164 | 7.3:+24661324 | MS.gene033701:CDS |
| GCAAACTCGATCTAAATTTC+AGG | 0.265701 | 7.3:+24656945 | MS.gene033701:CDS |
| TTCAATCTATTCAACCTTGC+AGG | 0.273305 | 7.3:-24668103 | None:intergenic |
| ACAACAGTAGATGAGGAAAA+AGG | 0.275639 | 7.3:+24659357 | MS.gene033701:CDS |
| GTGGATGGTGAACCAGTTAT+TGG | 0.277376 | 7.3:+24668073 | MS.gene033701:CDS |
| TATATTTCCATCCAGTAAAA+TGG | 0.284108 | 7.3:+24661401 | MS.gene033701:CDS |
| ATTGATCAAGCCTCGTTAAT+TGG | 0.288350 | 7.3:-24669688 | None:intergenic |
| CAATCGCTATTGCTGTCATT+TGG | 0.299049 | 7.3:-24667518 | None:intergenic |
| TTTCGGTCAGCTGTTTGTTT+TGG | 0.302187 | 7.3:+24669655 | MS.gene033701:CDS |
| GAAGGAACATAAGGCGAATT+TGG | 0.303337 | 7.3:-24661309 | None:intergenic |
| ATTTAGGATGCTCTAGATAC+TGG | 0.307297 | 7.3:+24658796 | MS.gene033701:intron |
| GTACAAACTCTTCTCAATAT+TGG | 0.309175 | 7.3:+24667366 | MS.gene033701:CDS |
| TGTCTTTGTTCAGGAGGTTT+TGG | 0.309499 | 7.3:+24666876 | MS.gene033701:CDS |
| CCCAAATGCATGGGACTTCC+CGG | 0.317575 | 7.3:-24661265 | None:intergenic |
| ACCGGGAAGTCCCATGCATT+TGG | 0.322827 | 7.3:+24661264 | MS.gene033701:CDS |
| CAGCTCAACGACATGGTTAA+AGG | 0.323238 | 7.3:+24667258 | MS.gene033701:CDS |
| ATAACTGTATTAGAAAGATA+TGG | 0.324745 | 7.3:+24667411 | MS.gene033701:CDS |
| AAAGATTGCTGATTTGGATA+TGG | 0.332136 | 7.3:+24665394 | MS.gene033701:CDS |
| CCCTCAACGTGTCTTTGTTC+AGG | 0.333162 | 7.3:+24666867 | MS.gene033701:CDS |
| TTTGAAGCTCAGCTGGTTAC+CGG | 0.343165 | 7.3:+24661246 | MS.gene033701:CDS |
| TTCTTTCATGGTTGGTCTGC+CGG | 0.349288 | 7.3:+24662580 | MS.gene033701:CDS |
| GGGAAGTTCGCTTGTCATAC+TGG | 0.349697 | 7.3:+24666902 | MS.gene033701:CDS |
| TCAAAGGAAAGATGGGTTCT+TGG | 0.358169 | 7.3:-24661228 | None:intergenic |
| AAAGGAATGTGCTTCTTTCA+TGG | 0.358284 | 7.3:+24662568 | MS.gene033701:CDS |
| TCCATTGTCGACGACTCTTC+AGG | 0.358674 | 7.3:-24669030 | None:intergenic |
| ACTTTCAGTTCATCTGGCCT+TGG | 0.361442 | 7.3:+24666806 | MS.gene033701:CDS |
| TCGGAGGAAGTTCCATATTC+AGG | 0.366734 | 7.3:-24654633 | None:intergenic |
| TCAGCACATGGCTGCCATAA+AGG | 0.368473 | 7.3:-24659384 | None:intergenic |
| AATCGCTATTGCTGTCATTT+GGG | 0.379502 | 7.3:-24667517 | None:intergenic |
| TTACCTCCAAAATCTCAGTT+TGG | 0.383019 | 7.3:-24654802 | None:intergenic |
| CCGGGAAGTCCCATGCATTT+GGG | 0.384687 | 7.3:+24661265 | MS.gene033701:CDS |
| GCTATGCAATAGGCTCTTCC+TGG | 0.387049 | 7.3:+24665326 | MS.gene033701:intron |
| CTATCGACTTGTATCAAATC+TGG | 0.387470 | 7.3:+24667554 | MS.gene033701:CDS |
| TGGATGGTGAACCAGTTATT+GGG | 0.387842 | 7.3:+24668074 | MS.gene033701:CDS |
| GGCGACAAGAGTCCTGAATA+TGG | 0.391354 | 7.3:+24654621 | MS.gene033701:CDS |
| CACGTTGAGGGGCCCACCTC+GGG | 0.396941 | 7.3:-24666855 | None:intergenic |
| ATTCGCCTTATGTTCCTTCT+GGG | 0.397735 | 7.3:+24661313 | MS.gene033701:CDS |
| GGTTATTATTGACCTTTGTA+AGG | 0.404580 | 7.3:+24665136 | MS.gene033701:CDS |
| TCAGATTGGCCTGATAAACT+TGG | 0.405648 | 7.3:+24656891 | MS.gene033701:intron |
| AACAATGAACACCTGCTGTC+TGG | 0.408312 | 7.3:+24667234 | MS.gene033701:CDS |
| AATCGCCTTCCCAAGGGATC+TGG | 0.411924 | 7.3:+24668952 | MS.gene033701:CDS |
| CTTTCAGTTCATCTGGCCTT+GGG | 0.415312 | 7.3:+24666807 | MS.gene033701:CDS |
| ACAACCGTATTTCTGATCTA+AGG | 0.416149 | 7.3:+24667951 | MS.gene033701:CDS |
| TTTAGCCGCCGTATTCTTTG+AGG | 0.417939 | 7.3:-24661378 | None:intergenic |
| ATAATTTGCTTGTCCTCGTC+AGG | 0.426242 | 7.3:-24667456 | None:intergenic |
| TATCATGCCTCCCATGGGGT+GGG | 0.427608 | 7.3:+24659427 | MS.gene033701:CDS |
| GCCGAACAAGACTAATCCTT+TGG | 0.430206 | 7.3:+24665420 | MS.gene033701:CDS |
| GGTCAAACTTTCAGTTCATC+TGG | 0.430223 | 7.3:+24666800 | MS.gene033701:intron |
| CATTCTTCATCAACGATGAA+TGG | 0.430373 | 7.3:+24654573 | None:intergenic |
| TCTTTCCTTTGAAGCTCAGC+TGG | 0.431957 | 7.3:+24661239 | MS.gene033701:CDS |
| ATCATGCCTCCCATGGGGTG+GGG | 0.432268 | 7.3:+24659428 | MS.gene033701:CDS |
| TACCTCCAAAATCTCAGTTT+GGG | 0.434033 | 7.3:-24654801 | None:intergenic |
| TGCTTCTGTATTTCAATGGC+AGG | 0.438477 | 7.3:+24662218 | MS.gene033701:CDS |
| TTGAAATTCGGTCCACCCTT+CGG | 0.442007 | 7.3:-24667186 | None:intergenic |
| ACCAAAGGATTAGTCTTGTT+CGG | 0.442652 | 7.3:-24665421 | None:intergenic |
| TTTACCAGGGTTCCATAGAA+AGG | 0.449010 | 7.3:-24655820 | None:intergenic |
| TACTCATATCGGAAGGAAAC+CGG | 0.449946 | 7.3:-24662599 | None:intergenic |
| AATGCGGCTGATGACTGTTA+TGG | 0.450028 | 7.3:+24658843 | MS.gene033701:CDS |
| AGCTCAACGACATGGTTAAA+GGG | 0.451062 | 7.3:+24667259 | MS.gene033701:CDS |
| CTTTCCTTAGATCAGAAATA+CGG | 0.452184 | 7.3:-24667955 | None:intergenic |
| ATAAGGCGAATTTGGTAAGT+TGG | 0.453192 | 7.3:-24661301 | None:intergenic |
| TTCAATCTTGGTGCAGAAGA+TGG | 0.453352 | 7.3:+24667204 | MS.gene033701:CDS |
| CAGTGTCAGAAGTATGCTTT+CGG | 0.455092 | 7.3:-24659643 | None:intergenic |
| AGAATCAGATACCTCAAAAC+AGG | 0.456813 | 7.3:+24669064 | MS.gene033701:CDS |
| AAAAGTGTTGCTTATAATGT+AGG | 0.463225 | 7.3:+24669219 | MS.gene033701:CDS |
| TAAAGTATCCTCAAAGAATA+CGG | 0.465003 | 7.3:+24661370 | MS.gene033701:CDS |
| GGTGGACCGAATTTCAATCT+TGG | 0.467640 | 7.3:+24667192 | MS.gene033701:CDS |
| TCCACCACAAATCGATCTAT+AGG | 0.468884 | 7.3:-24662178 | None:intergenic |
| GACGTGCTTCTGTATTTCAA+TGG | 0.474115 | 7.3:+24662214 | MS.gene033701:CDS |
| GGCTGAGACAATATTCTCTC+AGG | 0.475219 | 7.3:+24662628 | MS.gene033701:CDS |
| ATGGGCCCATATTGAAAAGT+TGG | 0.477163 | 7.3:+24669597 | MS.gene033701:CDS |
| TGTTCTAGCTCCAGATCCCT+TGG | 0.478538 | 7.3:-24668962 | None:intergenic |
| TGCTTATAATGTAGGTGAAA+AGG | 0.479206 | 7.3:+24669227 | MS.gene033701:CDS |
| TCATCTGGCCTTGGGAAGAG+TGG | 0.481495 | 7.3:+24666815 | MS.gene033701:CDS |
| TCTGCACCAAGATTGAAATT+CGG | 0.482025 | 7.3:-24667198 | None:intergenic |
| ACGACGAAGGACACCAAAAC+AGG | 0.484040 | 7.3:-24654765 | None:intergenic |
| GCTGAGCTTCAAAGGAAAGA+TGG | 0.487268 | 7.3:-24661236 | None:intergenic |
| GAATGTGCTTCTTTCATGGT+TGG | 0.490296 | 7.3:+24662572 | MS.gene033701:CDS |
| CGTTGAGCTGTCCAGACAGC+AGG | 0.498763 | 7.3:-24667245 | None:intergenic |
| CAGCCATGAGGTACTCATAT+CGG | 0.501823 | 7.3:-24662610 | None:intergenic |
| ATACTGGGACAAAGTCAAAC+AGG | 0.502101 | 7.3:+24666918 | MS.gene033701:CDS |
| TAACTGTATTAGAAAGATAT+GGG | 0.505446 | 7.3:+24667412 | MS.gene033701:CDS |
| TTATCATGCCTCCCATGGGG+TGG | 0.506551 | 7.3:+24659426 | MS.gene033701:CDS |
| TTCATACAACAGATCGTCCA+TGG | 0.507264 | 7.3:+24667619 | MS.gene033701:CDS |
| GATACCCCAGAAGGAACATA+AGG | 0.507465 | 7.3:-24661318 | None:intergenic |
| AGAAGAATTGCTTCCTCCGA+AGG | 0.509749 | 7.3:+24667170 | MS.gene033701:CDS |
| AGCTTACTGTCCCAAATGCA+TGG | 0.510420 | 7.3:-24661275 | None:intergenic |
| TCAAGAATCTGTAGAAGCTA+AGG | 0.511414 | 7.3:+24668165 | MS.gene033701:CDS |
| CAAATCTGGCAATTGTGAGA+TGG | 0.512027 | 7.3:+24667568 | MS.gene033701:CDS |
| CATCTGGCCTTGGGAAGAGT+GGG | 0.514875 | 7.3:+24666816 | MS.gene033701:CDS |
| ACTGCTCCAGCAACAACTGC+AGG | 0.516612 | 7.3:-24665356 | None:intergenic |
| AAATCTGGCAATTGTGAGAT+GGG | 0.518675 | 7.3:+24667569 | MS.gene033701:CDS |
| CATGAGATTATTTCACGGAC+AGG | 0.521752 | 7.3:-24667288 | None:intergenic |
| TCAATCTATTCAACCTTGCA+GGG | 0.522379 | 7.3:-24668102 | None:intergenic |
| CCTGATAAACTTGGAAAATG+AGG | 0.524035 | 7.3:+24656900 | MS.gene033701:CDS |
| TTGAAGCTCAGCTGGTTACC+GGG | 0.525308 | 7.3:+24661247 | MS.gene033701:CDS |
| CTGTCCGTGAAATAATCTCA+TGG | 0.529734 | 7.3:+24667289 | MS.gene033701:CDS |
| GGTAACCAGCTGAGCTTCAA+AGG | 0.531878 | 7.3:-24661244 | None:intergenic |
| ATTACTCTCTCAATATCTTC+AGG | 0.532069 | 7.3:-24659593 | None:intergenic |
| CTGAGCTTCAAAGGAAAGAT+GGG | 0.532305 | 7.3:-24661235 | None:intergenic |
| CTATTCTACAGTCAGTCAAA+TGG | 0.532364 | 7.3:+24669189 | MS.gene033701:intron |
| TATCAAGTGAGTGAAACTCT+TGG | 0.533347 | 7.3:-24667391 | None:intergenic |
| CAAGTCGATAGCTCATCATT+CGG | 0.534282 | 7.3:-24667542 | None:intergenic |
| CTTCATCAACGATGAATGGT+TGG | 0.542224 | 7.3:+24654577 | None:intergenic |
| CAATCCATGAGATTATTTCA+CGG | 0.544809 | 7.3:-24667293 | None:intergenic |
| GGAAGTTCGCTTGTCATACT+GGG | 0.546665 | 7.3:+24666903 | MS.gene033701:CDS |
| GTTGGAGAAGCCTCATTCTA+CGG | 0.548073 | 7.3:+24654595 | MS.gene033701:CDS |
| CGAGAGAGATCTTAATAACA+AGG | 0.552720 | 7.3:+24659697 | MS.gene033701:CDS |
| GTTCTAGCTCCAGATCCCTT+GGG | 0.553112 | 7.3:-24668961 | None:intergenic |
| AGTAGCGTACTGCCTAGAAA+AGG | 0.555517 | 7.3:-24669286 | None:intergenic |
| TGAAGATATTGAGAGAGTAA+TGG | 0.556496 | 7.3:+24659595 | MS.gene033701:CDS |
| GTCTACACAAGTTGAAGAGA+TGG | 0.558986 | 7.3:+24668999 | MS.gene033701:CDS |
| CGAAAGCATACTTCTGACAC+TGG | 0.560825 | 7.3:+24659644 | MS.gene033701:CDS |
| ACAAGTTCAGCCCCACCCCA+TGG | 0.560898 | 7.3:-24659438 | None:intergenic |
| GCAGCCTATAGATCGATTTG+TGG | 0.562037 | 7.3:+24662174 | MS.gene033701:CDS |
| CCTGAACAAAGACACGTTGA+GGG | 0.562127 | 7.3:-24666867 | None:intergenic |
| ACAACTGCAGGAAAAGCTCC+AGG | 0.562627 | 7.3:-24665344 | None:intergenic |
| ACAAATGGTGTGAGAACCAA+AGG | 0.562640 | 7.3:-24665436 | None:intergenic |
| GAGCTAGAACACTTCGCGAA+TGG | 0.563011 | 7.3:+24668974 | MS.gene033701:CDS |
| TCAACGTGTCTTTGTTCAGG+AGG | 0.563282 | 7.3:+24666870 | MS.gene033701:CDS |
| TTCTACAGTCAGTCAAATGG+TGG | 0.566104 | 7.3:+24669192 | MS.gene033701:intron |
| AACAATATGATCTTTGAAGT+CGG | 0.566774 | 7.3:-24654652 | None:intergenic |
| AATGGATGGAAAGTTGAAAG+TGG | 0.570715 | 7.3:+24660914 | MS.gene033701:CDS |
| CTTCCGATATGAGTACCTCA+TGG | 0.572856 | 7.3:+24662607 | MS.gene033701:CDS |
| CTAGATACTGGAAACTGCAA+TGG | 0.574958 | 7.3:+24658808 | MS.gene033701:CDS |
| TCCTGAAGAGTCGTCGACAA+TGG | 0.575034 | 7.3:+24669029 | MS.gene033701:CDS |
| GCCTATAGATCGATTTGTGG+TGG | 0.575474 | 7.3:+24662177 | MS.gene033701:CDS |
| GAAGAATTGCTTCCTCCGAA+GGG | 0.576132 | 7.3:+24667171 | MS.gene033701:CDS |
| TTCGCCTTATGTTCCTTCTG+GGG | 0.576809 | 7.3:+24661314 | MS.gene033701:CDS |
| GTGTAATACGCTGGTTTGAA+AGG | 0.578503 | 7.3:-24665110 | None:intergenic |
| CACTACTTTGAGTTATGTGA+AGG | 0.578607 | 7.3:+24669263 | MS.gene033701:CDS |
| CCAAAATCTCAGTTTGGGAG+TGG | 0.579247 | 7.3:-24654796 | None:intergenic |
| ATGTGTTAGATCTCCCGAGG+TGG | 0.582322 | 7.3:+24666842 | MS.gene033701:CDS |
| CCGAGCAACTGATGAAAATG+AGG | 0.584472 | 7.3:+24668201 | MS.gene033701:CDS |
| ACACGTTGAGGGGCCCACCT+CGG | 0.589888 | 7.3:-24666856 | None:intergenic |
| TTGACGAATCGCCTTCCCAA+GGG | 0.597934 | 7.3:+24668946 | MS.gene033701:CDS |
| TGTGTTAGATCTCCCGAGGT+GGG | 0.598071 | 7.3:+24666843 | MS.gene033701:CDS |
| GATTCCTTTCTATGGAACCC+TGG | 0.600275 | 7.3:+24655816 | MS.gene033701:CDS |
| TCTTCAACCAAATTCTCTAG+TGG | 0.600763 | 7.3:+24659302 | MS.gene033701:CDS |
| CAAGTTCAGCCCCACCCCAT+GGG | 0.600881 | 7.3:-24659437 | None:intergenic |
| AGCTGCCACAACAGTAGATG+AGG | 0.602450 | 7.3:+24659350 | MS.gene033701:CDS |
| TTTGACGAATCGCCTTCCCA+AGG | 0.604762 | 7.3:+24668945 | MS.gene033701:CDS |
| ATTGCTCAGCACATGTGAGA+AGG | 0.605290 | 7.3:-24655783 | None:intergenic |
| CAACGACATGGTTAAAGGGA+AGG | 0.605497 | 7.3:+24667263 | MS.gene033701:CDS |
| ATGTAGGTGAAAAGGAACAA+TGG | 0.607240 | 7.3:+24669235 | MS.gene033701:CDS |
| TAGAGCATTGAAAATGCACC+TGG | 0.608405 | 7.3:+24667144 | MS.gene033701:intron |
| AGCTGAAGTAGCTGCCAATG+AGG | 0.609407 | 7.3:+24668009 | MS.gene033701:CDS |
| GGGTGGGGCTGAACTTGTTG+AGG | 0.611562 | 7.3:+24659443 | MS.gene033701:CDS |
| TGAGGACTTTGTGAAAAGAC+TGG | 0.611792 | 7.3:+24656918 | MS.gene033701:CDS |
| GTCTGGACAGCTCAACGACA+TGG | 0.612833 | 7.3:+24667251 | MS.gene033701:CDS |
| GCTTACTGTCCCAAATGCAT+GGG | 0.612852 | 7.3:-24661274 | None:intergenic |
| GCTAGATTAAGTACCTCCCA+TGG | 0.614863 | 7.3:-24667636 | None:intergenic |
| TGCCAATGAGGCAAAAGCAG+AGG | 0.615316 | 7.3:+24668021 | MS.gene033701:CDS |
| CAAACCAGCGTATTACACAC+TGG | 0.616115 | 7.3:+24665115 | MS.gene033701:CDS |
| GTTCAGCCCCACCCCATGGG+AGG | 0.616296 | 7.3:-24659434 | None:intergenic |
| GCTGGTTTGAAAGGTGGCTG+TGG | 0.616812 | 7.3:-24665101 | None:intergenic |
| GGAAGCAATTCTTCTAAACC+AGG | 0.617258 | 7.3:-24667162 | None:intergenic |
| TGTCGCCGATCCGTAGAATG+AGG | 0.619482 | 7.3:-24654605 | None:intergenic |
| GAATTGCTTCCTCCGAAGGG+TGG | 0.620658 | 7.3:+24667174 | MS.gene033701:CDS |
| ATAACCAGTGTGTAATACGC+TGG | 0.626518 | 7.3:-24665119 | None:intergenic |
| TCCTGAACAAAGACACGTTG+AGG | 0.626849 | 7.3:-24666868 | None:intergenic |
| AAATTCGGTCCACCCTTCGG+AGG | 0.630320 | 7.3:-24667183 | None:intergenic |
| GATATTGAGAGAGTAATGGT+TGG | 0.632531 | 7.3:+24659599 | MS.gene033701:CDS |
| TCAAAACTAGCACTTGTGGA+TGG | 0.635198 | 7.3:+24668058 | MS.gene033701:CDS |
| TCTACAGTCAGTCAAATGGT+GGG | 0.636123 | 7.3:+24669193 | MS.gene033701:intron |
| AGTGGTCGAGCTCACGACGA+AGG | 0.636523 | 7.3:-24654778 | None:intergenic |
| AGAAGCCTCATTCTACGGAT+CGG | 0.636714 | 7.3:+24654600 | MS.gene033701:CDS |
| ACATAAGCCCACTCTTCCCA+AGG | 0.642323 | 7.3:-24666823 | None:intergenic |
| TTCTAGGCAGTACGCTACTG+AGG | 0.642555 | 7.3:+24669290 | MS.gene033701:CDS |
| TTCATGCAAAGCTAGTCGAA+AGG | 0.642569 | 7.3:+24662550 | MS.gene033701:intron |
| TCATACAACAGATCGTCCAT+GGG | 0.646415 | 7.3:+24667620 | MS.gene033701:CDS |
| TAGCTCCAGATCCCTTGGGA+AGG | 0.649924 | 7.3:-24668957 | None:intergenic |
| CATGAGGTACTCATATCGGA+AGG | 0.657242 | 7.3:-24662606 | None:intergenic |
| TTATTGGGGAAAACCCTGCA+AGG | 0.661602 | 7.3:+24668089 | MS.gene033701:CDS |
| TTACCAAAAGATACCCCAGA+AGG | 0.662578 | 7.3:-24661327 | None:intergenic |
| CCATAGAAAGGAATCTTGTG+AGG | 0.662629 | 7.3:-24655808 | None:intergenic |
| TACAACAGATCGTCCATGGG+AGG | 0.664252 | 7.3:+24667623 | MS.gene033701:CDS |
| ATTTCCATCCAGTAAAATGG+AGG | 0.665342 | 7.3:+24661404 | MS.gene033701:CDS |
| CTTATGTGTTAGATCTCCCG+AGG | 0.668646 | 7.3:+24666839 | MS.gene033701:CDS |
| TAATACGCTGGTTTGAAAGG+TGG | 0.671260 | 7.3:-24665107 | None:intergenic |
| CTGAACAAAGACACGTTGAG+GGG | 0.677463 | 7.3:-24666866 | None:intergenic |
| GACTAGAAAGTACCTTACAA+AGG | 0.683156 | 7.3:-24665148 | None:intergenic |
| GGATGGTGAACCAGTTATTG+GGG | 0.686077 | 7.3:+24668075 | MS.gene033701:CDS |
| GGATGCAGAAGTACTAACAG+AGG | 0.695226 | 7.3:+24669618 | MS.gene033701:CDS |
| AATATGATCTTTGAAGTCGG+AGG | 0.698021 | 7.3:-24654649 | None:intergenic |
| AGAATATTGTCTCAGCCATG+AGG | 0.700331 | 7.3:-24662622 | None:intergenic |
| GGACTTTGTGAAAAGACTGG+TGG | 0.703361 | 7.3:+24656921 | MS.gene033701:CDS |
| GTTATGTAAAAGTCAGCACA+TGG | 0.708008 | 7.3:-24659396 | None:intergenic |
| AGAGTCAAAACTAGCACTTG+TGG | 0.709196 | 7.3:+24668054 | MS.gene033701:CDS |
| AGTATCCTCAAAGAATACGG+CGG | 0.717953 | 7.3:+24661373 | MS.gene033701:CDS |
| TCTTCGAAGACCAATTAACG+AGG | 0.718077 | 7.3:+24669678 | MS.gene033701:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24654588 | 24669705 | 24654588 | ID=MS.gene033701 |
| chr7.3 | mRNA | 24654588 | 24669705 | 24654588 | ID=MS.gene033701.t1;Parent=MS.gene033701 |
| chr7.3 | exon | 24654588 | 24654671 | 24654588 | ID=MS.gene033701.t1.exon1;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24654588 | 24654671 | 24654588 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24654761 | 24654820 | 24654761 | ID=MS.gene033701.t1.exon2;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24654761 | 24654820 | 24654761 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24655781 | 24655837 | 24655781 | ID=MS.gene033701.t1.exon3;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24655781 | 24655837 | 24655781 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24656895 | 24656966 | 24656895 | ID=MS.gene033701.t1.exon4;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24656895 | 24656966 | 24656895 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24658802 | 24658864 | 24658802 | ID=MS.gene033701.t1.exon5;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24658802 | 24658864 | 24658802 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24659288 | 24659464 | 24659288 | ID=MS.gene033701.t1.exon6;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24659288 | 24659464 | 24659288 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24659587 | 24659718 | 24659587 | ID=MS.gene033701.t1.exon7;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24659587 | 24659718 | 24659587 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24660869 | 24660935 | 24660869 | ID=MS.gene033701.t1.exon8;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24660869 | 24660935 | 24660869 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24661226 | 24661425 | 24661226 | ID=MS.gene033701.t1.exon9;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24661226 | 24661425 | 24661226 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24662169 | 24662239 | 24662169 | ID=MS.gene033701.t1.exon10;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24662169 | 24662239 | 24662169 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24662565 | 24662649 | 24662565 | ID=MS.gene033701.t1.exon11;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24662565 | 24662649 | 24662565 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24665089 | 24665157 | 24665089 | ID=MS.gene033701.t1.exon12;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24665089 | 24665157 | 24665089 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24665338 | 24665456 | 24665338 | ID=MS.gene033701.t1.exon13;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24665338 | 24665456 | 24665338 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24666801 | 24666939 | 24666801 | ID=MS.gene033701.t1.exon14;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24666801 | 24666939 | 24666801 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24667147 | 24667644 | 24667147 | ID=MS.gene033701.t1.exon15;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24667147 | 24667644 | 24667147 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24667923 | 24668222 | 24667923 | ID=MS.gene033701.t1.exon16;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24667923 | 24668222 | 24667923 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24668907 | 24669085 | 24668907 | ID=MS.gene033701.t1.exon17;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24668907 | 24669085 | 24668907 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24669200 | 24669311 | 24669200 | ID=MS.gene033701.t1.exon18;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24669200 | 24669311 | 24669200 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| chr7.3 | exon | 24669595 | 24669705 | 24669595 | ID=MS.gene033701.t1.exon19;Parent=MS.gene033701.t1 |
| chr7.3 | CDS | 24669595 | 24669705 | 24669595 | ID=cds.MS.gene033701.t1;Parent=MS.gene033701.t1 |
| Gene Sequence |
| Protein sequence |
