Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033936.t1 | XP_013463738.1 | 98.6 | 296 | 4 | 0 | 1 | 296 | 1 | 296 | 1.10E-157 | 565.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033936.t1 | Q9SPE5 | 73.1 | 294 | 75 | 1 | 3 | 296 | 2 | 291 | 2.6e-118 | 426.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033936.t1 | B7FIS3 | 98.6 | 296 | 4 | 0 | 1 | 296 | 1 | 296 | 8.2e-158 | 565.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70948 | MS.gene033936 | PPI |
| MS.gene035781 | MS.gene033936 | PPI |
| MS.gene73141 | MS.gene033936 | PPI |
| MS.gene064565 | MS.gene033936 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033936.t1 | MTR_2g047110 | 98.649 | 296 | 4 | 0 | 1 | 296 | 1 | 296 | 0.0 | 597 |
| MS.gene033936.t1 | MTR_2g047110 | 98.929 | 280 | 3 | 0 | 17 | 296 | 9 | 288 | 0.0 | 568 |
| MS.gene033936.t1 | MTR_2g047110 | 99.142 | 233 | 2 | 0 | 64 | 296 | 1 | 233 | 3.16e-171 | 473 |
| MS.gene033936.t1 | MTR_8g089250 | 75.000 | 296 | 74 | 0 | 1 | 296 | 1 | 296 | 7.50e-170 | 472 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033936.t1 | AT4G20410 | 73.129 | 294 | 75 | 1 | 3 | 296 | 2 | 291 | 5.19e-161 | 450 |
| MS.gene033936.t1 | AT4G20410 | 73.665 | 281 | 70 | 1 | 16 | 296 | 21 | 297 | 1.38e-153 | 431 |
Find 60 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTCTCATACGCTATTT+TGG | 0.260813 | 2.2:+40000390 | None:intergenic |
| TTTGGCTTTCTCATGGTTCC+TGG | 0.286035 | 2.2:+40000408 | None:intergenic |
| AACATACAGTTTATCAGCTT+TGG | 0.328896 | 2.2:+40001286 | None:intergenic |
| CCAAACCTTGGACTGACTAT+TGG | 0.333636 | 2.2:+39997661 | None:intergenic |
| TTTCCCTCTATGTAGTGCTT+TGG | 0.342344 | 2.2:-39999331 | MS.gene033936:intron |
| TAAATCATCTGCAGATCATT+AGG | 0.374159 | 2.2:-39995906 | MS.gene033936:intron |
| TGCATCATCCCTGTTGAGAT+TGG | 0.381170 | 2.2:-39997711 | MS.gene033936:CDS |
| CCGCCAAGCCCAATCTCAAC+AGG | 0.385743 | 2.2:+39997702 | None:intergenic |
| TGCTACTGTTCTTTATGAAC+AGG | 0.387225 | 2.2:-40000943 | MS.gene033936:CDS |
| GCATCATCCCTGTTGAGATT+GGG | 0.392208 | 2.2:-39997710 | MS.gene033936:CDS |
| TATAACTGAATAGCTTCTTC+AGG | 0.395210 | 2.2:+39999297 | None:intergenic |
| ATCCCTGTTGAGATTGGGCT+TGG | 0.408247 | 2.2:-39997705 | MS.gene033936:CDS |
| CTTATTCTGGTGTAGCGAAT+GGG | 0.433100 | 2.2:-40000441 | MS.gene033936:intron |
| CACTCACTGCGTGGTCAAGA+TGG | 0.445217 | 2.2:+39996367 | None:intergenic |
| CAGTGAATCTTCATCATCTT+CGG | 0.448770 | 2.2:+39995831 | None:intergenic |
| CAGCTTTGGCTAACAACTTG+TGG | 0.461684 | 2.2:+40001300 | None:intergenic |
| TCACTAGGTGGAGTGCTGAT+TGG | 0.463091 | 2.2:-40000971 | MS.gene033936:CDS |
| GGCTAACAACTTGTGGGGAT+CGG | 0.464099 | 2.2:+40001307 | None:intergenic |
| TAGCTAAGGAACTTAGCAAC+TGG | 0.465416 | 2.2:-40000163 | MS.gene033936:CDS |
| CAAGTTTCTTTCTGCTTACA+CGG | 0.466497 | 2.2:-39996439 | MS.gene033936:CDS |
| TGACAAGTTAACCAGACCTT+GGG | 0.491717 | 2.2:-40000219 | MS.gene033936:intron |
| TTTCTTTCTGCTTACACGGA+TGG | 0.495732 | 2.2:-39996435 | MS.gene033936:CDS |
| GCATCTGATGCTCTTGCAAA+GGG | 0.496913 | 2.2:-40000074 | MS.gene033936:CDS |
| AGTTGCAGACTTCTATCAAA+AGG | 0.499741 | 2.2:-40000135 | MS.gene033936:CDS |
| GCTTAAAGTCGTGAGCATAA+AGG | 0.506521 | 2.2:+39997158 | None:intergenic |
| AGCTTTGGCTAACAACTTGT+GGG | 0.507072 | 2.2:+40001301 | None:intergenic |
| TTTGCAAGAGCATCAGATGC+AGG | 0.516590 | 2.2:+40000077 | None:intergenic |
| AATTCTTGAAGACGATGAAA+AGG | 0.517181 | 2.2:-39999259 | MS.gene033936:CDS |
| CCTGTTGAGATTGGGCTTGG+CGG | 0.521320 | 2.2:-39997702 | MS.gene033936:CDS |
| ACTCACTGCGTGGTCAAGAT+GGG | 0.521595 | 2.2:+39996368 | None:intergenic |
| ATGCTCTTGCAAAGGGAGCC+CGG | 0.525968 | 2.2:-40000067 | MS.gene033936:intron |
| CAACTTGTGGGGATCGGAGG+AGG | 0.526835 | 2.2:+40001313 | None:intergenic |
| AGAGCATCAGATGCAGGTTG+TGG | 0.531426 | 2.2:+40000083 | None:intergenic |
| TGCATCTGATGCTCTTGCAA+AGG | 0.538075 | 2.2:-40000075 | MS.gene033936:CDS |
| ATCTGCCGCTGCTCTAGCTA+AGG | 0.540975 | 2.2:-40000177 | MS.gene033936:CDS |
| CTTGCGAGGAAACTTCCAAC+AGG | 0.542084 | 2.2:-39995883 | MS.gene033936:CDS |
| CGAAGATGATGAAGATTCAC+TGG | 0.547559 | 2.2:-39995830 | MS.gene033936:CDS |
| ACACTATTAGAGGTTAAGTC+AGG | 0.550198 | 2.2:+39995797 | None:intergenic |
| AATGCACTCACATCGCCTGT+TGG | 0.562050 | 2.2:+39995868 | None:intergenic |
| AAAGGCATCTGAGTTGTACA+TGG | 0.568197 | 2.2:-40000117 | MS.gene033936:CDS |
| CTGAATAGCTTCTTCAGGCA+TGG | 0.575199 | 2.2:+39999302 | None:intergenic |
| ATGTGCTTAGCTGCATCCCA+AGG | 0.578977 | 2.2:+40000203 | None:intergenic |
| ACTTGCTAGCACAACGATTG+TGG | 0.581103 | 2.2:+39996457 | None:intergenic |
| GAACAAAACTCAGTCTCACT+AGG | 0.581117 | 2.2:-40000986 | MS.gene033936:CDS |
| GATGTGAGTGCATTAAAGAC+TGG | 0.590236 | 2.2:-39995859 | MS.gene033936:CDS |
| TAACAACTTGTGGGGATCGG+AGG | 0.592153 | 2.2:+40001310 | None:intergenic |
| ACTGTTCTTTATGAACAGGC+TGG | 0.592693 | 2.2:-40000939 | MS.gene033936:intron |
| TACAGCACGGTATAGATCAA+AGG | 0.594451 | 2.2:+39999227 | None:intergenic |
| TGCTACCAATAGTCAGTCCA+AGG | 0.603812 | 2.2:-39997666 | MS.gene033936:intron |
| CTGAGTTGTACATGGAGTGT+GGG | 0.613436 | 2.2:-40000109 | MS.gene033936:CDS |
| TGCAGATCATTAGGCTTGCG+AGG | 0.613574 | 2.2:-39995897 | MS.gene033936:intron |
| TTGGGATGCAGCTAAGCACA+TGG | 0.614457 | 2.2:-40000201 | MS.gene033936:CDS |
| CGAATGGGTTTAGAGCTGCC+AGG | 0.618769 | 2.2:-40000426 | MS.gene033936:CDS |
| TCTGAGTTGTACATGGAGTG+TGG | 0.633489 | 2.2:-40000110 | MS.gene033936:CDS |
| CGCCAAGCCCAATCTCAACA+GGG | 0.645427 | 2.2:+39997703 | None:intergenic |
| AAGTTCCTTAGCTAGAGCAG+CGG | 0.656253 | 2.2:+40000172 | None:intergenic |
| TATACACACTAGTTACAGCA+CGG | 0.660394 | 2.2:+39999214 | None:intergenic |
| GCTTTGGCTAACAACTTGTG+GGG | 0.680602 | 2.2:+40001302 | None:intergenic |
| CAAAACTCAGTCTCACTAGG+TGG | 0.687722 | 2.2:-40000983 | MS.gene033936:CDS |
| GCGTATGAGAAAGCTTCACA+AGG | 0.694182 | 2.2:-40000382 | MS.gene033936:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATAATACTTTGAT+TGG | + | chr2.2:40001036-40001055 | None:intergenic | 10.0% |
| !! | TAAATAGTAAATCTTAAAAT+TGG | + | chr2.2:40000544-40000563 | None:intergenic | 10.0% |
| !!! | CAAAGTATTATTTTTATTAA+TGG | - | chr2.2:40001038-40001057 | MS.gene033936:intron | 10.0% |
| !! | AAAAATTAAATAATAGCCAA+AGG | + | chr2.2:39999579-39999598 | None:intergenic | 15.0% |
| !! | GTAAAATAATGAAAAAAGAT+AGG | + | chr2.2:39998007-39998026 | None:intergenic | 15.0% |
| !! | TAACAAATTCAATCTATAAT+AGG | - | chr2.2:39998057-39998076 | MS.gene033936:intron | 15.0% |
| !! | TATTTAAAAATTCAAAGGAA+TGG | - | chr2.2:39998758-39998777 | MS.gene033936:intron | 15.0% |
| !! | TTAAATATTGTAGTATAACA+TGG | - | chr2.2:39998143-39998162 | MS.gene033936:intron | 15.0% |
| !!! | ACAGAATTTATTAGTTTTAT+TGG | - | chr2.2:40000272-40000291 | MS.gene033936:intron | 15.0% |
| !!! | ATTCATTATCTATATTTTTG+CGG | + | chr2.2:40000816-40000835 | None:intergenic | 15.0% |
| !!! | ATTGAATATAAACTTTTACT+TGG | - | chr2.2:39998030-39998049 | MS.gene033936:intron | 15.0% |
| !!! | GATGTTATTTAAAAATTCAA+AGG | - | chr2.2:39998753-39998772 | MS.gene033936:intron | 15.0% |
| !!! | GTGATTTTTTTCAAATTATT+AGG | - | chr2.2:39996440-39996459 | MS.gene033936:CDS | 15.0% |
| !!! | TTGAATATAAACTTTTACTT+GGG | - | chr2.2:39998031-39998050 | MS.gene033936:intron | 15.0% |
| !! | AAAAAAACGAAATTTATACG+AGG | + | chr2.2:39998238-39998257 | None:intergenic | 20.0% |
| !! | AACACTTCCAAATTTATAAT+TGG | - | chr2.2:39998491-39998510 | MS.gene033936:intron | 20.0% |
| !! | ACTATCAGTAAAATTTATGT+AGG | - | chr2.2:40000411-40000430 | MS.gene033936:CDS | 20.0% |
| !! | ATATATTCTTTGCAAAAATC+AGG | - | chr2.2:39997261-39997280 | MS.gene033936:intron | 20.0% |
| !! | ATCAATGTATATATTTCATC+TGG | - | chr2.2:39997696-39997715 | MS.gene033936:CDS | 20.0% |
| !! | ATGCAGATAACAATAATTAA+GGG | + | chr2.2:39999282-39999301 | None:intergenic | 20.0% |
| !! | ATTTGATAAATAGGTTAGAA+CGG | - | chr2.2:39998703-39998722 | MS.gene033936:intron | 20.0% |
| !! | CTTATATCAATCAAATTCAA+AGG | + | chr2.2:39996094-39996113 | None:intergenic | 20.0% |
| !! | GATCAAAATCAAAGAATATA+AGG | + | chr2.2:39996793-39996812 | None:intergenic | 20.0% |
| !! | TAAATAGGATTATTGAACTA+TGG | - | chr2.2:39996059-39996078 | MS.gene033936:intron | 20.0% |
| !! | TAATTGAACTGATGAATAAA+TGG | - | chr2.2:40000598-40000617 | MS.gene033936:intron | 20.0% |
| !! | TATCATTACTTGAAAATCAA+TGG | + | chr2.2:39998427-39998446 | None:intergenic | 20.0% |
| !! | TATGCAGATAACAATAATTA+AGG | + | chr2.2:39999283-39999302 | None:intergenic | 20.0% |
| !!! | AAGGTATTATGAAAAACATA+TGG | + | chr2.2:39997778-39997797 | None:intergenic | 20.0% |
| !!! | AATTTTTTGATCATACATTC+TGG | - | chr2.2:40000450-40000469 | MS.gene033936:intron | 20.0% |
| !!! | ATTGGATATAAGAGATTTTA+AGG | + | chr2.2:40001018-40001037 | None:intergenic | 20.0% |
| !!! | ATTTTTTGATCATACATTCT+GGG | - | chr2.2:40000451-40000470 | MS.gene033936:intron | 20.0% |
| !!! | CTTATATGTTGTTTTTCTTT+TGG | - | chr2.2:40000789-40000808 | MS.gene033936:intron | 20.0% |
| !!! | GAATTTTTTAGATTAGATAC+TGG | + | chr2.2:39998593-39998612 | None:intergenic | 20.0% |
| !!! | TAAATAGTTAAGGGTATTAT+AGG | - | chr2.2:40000223-40000242 | MS.gene033936:intron | 20.0% |
| !!! | TATTATGTTTTTCACTTGTA+TGG | - | chr2.2:39999691-39999710 | MS.gene033936:intron | 20.0% |
| !!! | TCTCTAGAATAAATAGTTAA+GGG | + | chr2.2:40000182-40000201 | None:intergenic | 20.0% |
| !!! | TGATATTTTTTGTCAACTAT+GGG | - | chr2.2:40001171-40001190 | MS.gene033936:intron | 20.0% |
| !!! | TTGATTTTCAAGTAATGATA+TGG | - | chr2.2:39998427-39998446 | MS.gene033936:intron | 20.0% |
| !!! | TTTGTTTAGTATGTAGTTTT+TGG | - | chr2.2:39997296-39997315 | MS.gene033936:intron | 20.0% |
| ! | AAAGGTAGCATTTGATAAAT+AGG | - | chr2.2:39998694-39998713 | MS.gene033936:intron | 25.0% |
| ! | AACAAATTCGATTAAGCATA+TGG | + | chr2.2:40000579-40000598 | None:intergenic | 25.0% |
| ! | AACATCAACACAATTATGAT+TGG | + | chr2.2:39997579-39997598 | None:intergenic | 25.0% |
| ! | AAGTAATGATATGGTGATAA+AGG | - | chr2.2:39998436-39998455 | MS.gene033936:intron | 25.0% |
| ! | AATGGGATGATAAATAGTTA+AGG | - | chr2.2:40000213-40000232 | MS.gene033936:intron | 25.0% |
| ! | AATTCACTAAATACCAACTT+AGG | - | chr2.2:39998608-39998627 | MS.gene033936:intron | 25.0% |
| ! | ACATCAACACAATTATGATT+GGG | + | chr2.2:39997578-39997597 | None:intergenic | 25.0% |
| ! | ACTTCCAAATTTATAATTGG+AGG | - | chr2.2:39998494-39998513 | MS.gene033936:intron | 25.0% |
| ! | AGAATAAATCTCTTTGTAAG+GGG | + | chr2.2:39999183-39999202 | None:intergenic | 25.0% |
| ! | AGAGAATAAATCTCTTTGTA+AGG | + | chr2.2:39999185-39999204 | None:intergenic | 25.0% |
| ! | AGAGATTTATTCTCTTAACT+AGG | - | chr2.2:39999190-39999209 | MS.gene033936:intron | 25.0% |
| ! | AGGTTCTCTATATATTCTAT+TGG | - | chr2.2:39998077-39998096 | MS.gene033936:intron | 25.0% |
| ! | AGTTATAATATTCCAAACCT+TGG | + | chr2.2:39999481-39999500 | None:intergenic | 25.0% |
| ! | AGTTTCTGTTAAAGTTATAG+CGG | - | chr2.2:39996585-39996604 | MS.gene033936:intron | 25.0% |
| ! | ATGGGATGATAAATAGTTAA+GGG | - | chr2.2:40000214-40000233 | MS.gene033936:intron | 25.0% |
| ! | ATTCATGTAATTACAAGTGT+CGG | + | chr2.2:39996417-39996436 | None:intergenic | 25.0% |
| ! | CATTTGACATATAAACAGAA+CGG | + | chr2.2:39998859-39998878 | None:intergenic | 25.0% |
| ! | GAACATGCATATAAACAATA+TGG | + | chr2.2:39999769-39999788 | None:intergenic | 25.0% |
| ! | GAGAATAAATCTCTTTGTAA+GGG | + | chr2.2:39999184-39999203 | None:intergenic | 25.0% |
| ! | TAAAACTAGTCAACAAAATC+TGG | + | chr2.2:39999080-39999099 | None:intergenic | 25.0% |
| ! | TAAATGGATATAAATGCTTG+TGG | - | chr2.2:40000614-40000633 | MS.gene033936:intron | 25.0% |
| ! | TAAGCCTCCAATTATAAATT+TGG | + | chr2.2:39998501-39998520 | None:intergenic | 25.0% |
| ! | TATATATATGGACTCAACTT+TGG | - | chr2.2:40001196-40001215 | MS.gene033936:intron | 25.0% |
| ! | TATATGCAAATTGGTTATCT+TGG | + | chr2.2:39997246-39997265 | None:intergenic | 25.0% |
| ! | TATGATAGCCTACTTAAAAT+AGG | - | chr2.2:39998338-39998357 | MS.gene033936:intron | 25.0% |
| ! | TGATTCTTGCACTAAAAAAA+TGG | + | chr2.2:40000890-40000909 | None:intergenic | 25.0% |
| ! | TGCAAAGAATATATGCAAAT+TGG | + | chr2.2:39997255-39997274 | None:intergenic | 25.0% |
| ! | TTCCATTTCAGATATAGTTA+GGG | - | chr2.2:39997472-39997491 | MS.gene033936:intron | 25.0% |
| ! | TTCTTATCATGTACTAATTC+AGG | - | chr2.2:39996021-39996040 | MS.gene033936:intron | 25.0% |
| ! | TTTCAAATTATTAGGTGTGT+CGG | - | chr2.2:39996448-39996467 | MS.gene033936:CDS | 25.0% |
| ! | TTTCCATTTCAGATATAGTT+AGG | - | chr2.2:39997471-39997490 | MS.gene033936:intron | 25.0% |
| !! | AAAAGAAACTCTGGTTATTT+TGG | + | chr2.2:40000478-40000497 | None:intergenic | 25.0% |
| !! | AGTACTTATTGATTGAAGAT+TGG | + | chr2.2:40001152-40001171 | None:intergenic | 25.0% |
| !! | AGTATGTCCAAATTACATTT+TGG | - | chr2.2:39996630-39996649 | MS.gene033936:intron | 25.0% |
| !! | ATTTGCTAAATACTCTGAAA+GGG | - | chr2.2:39999534-39999553 | MS.gene033936:intron | 25.0% |
| !! | CTGTTACTTGAAGTAATTTA+TGG | - | chr2.2:39996254-39996273 | MS.gene033936:intron | 25.0% |
| !! | GTACTTATTGATTGAAGATT+GGG | + | chr2.2:40001151-40001170 | None:intergenic | 25.0% |
| !! | TCATCCTATGAATATTTTGT+CGG | + | chr2.2:40000389-40000408 | None:intergenic | 25.0% |
| !! | TTGTTTTCGTTAGTGTAAAT+TGG | - | chr2.2:39999316-39999335 | MS.gene033936:CDS | 25.0% |
| !!! | AATCCAAATTTTTTACCTTG+CGG | - | chr2.2:40000926-40000945 | MS.gene033936:intron | 25.0% |
| !!! | AGATTTTAGTTCCACTAAAA+GGG | - | chr2.2:39998803-39998822 | MS.gene033936:intron | 25.0% |
| !!! | ATATGTTTCCTTCTTTGTTT+TGG | - | chr2.2:39997538-39997557 | MS.gene033936:intron | 25.0% |
| !!! | ATTTTGTTGACTAGTTTTAC+TGG | - | chr2.2:39999081-39999100 | MS.gene033936:intron | 25.0% |
| !!! | CTATATTTAGTTTGCTAACT+AGG | - | chr2.2:39999657-39999676 | MS.gene033936:intron | 25.0% |
| !!! | CTCTCTAGAATAAATAGTTA+AGG | + | chr2.2:40000183-40000202 | None:intergenic | 25.0% |
| !!! | CTGATATTTTTTGTCAACTA+TGG | - | chr2.2:40001170-40001189 | MS.gene033936:intron | 25.0% |
| !!! | GATATTTTTTGTCAACTATG+GGG | - | chr2.2:40001172-40001191 | MS.gene033936:intron | 25.0% |
| !!! | TAGATTTTAGTTCCACTAAA+AGG | - | chr2.2:39998802-39998821 | MS.gene033936:intron | 25.0% |
| !!! | TGTAAAGCTCATATTTTAGA+GGG | - | chr2.2:39999252-39999271 | MS.gene033936:CDS | 25.0% |
| !!! | TTAGTATGTAGTTTTTGGAT+TGG | - | chr2.2:39997301-39997320 | MS.gene033936:intron | 25.0% |
| !!! | TTGAAATACCTTGTTATTAC+CGG | - | chr2.2:40001086-40001105 | MS.gene033936:intron | 25.0% |
| !!! | TTGTAAAGCTCATATTTTAG+AGG | - | chr2.2:39999251-39999270 | MS.gene033936:CDS | 25.0% |
| AAAATAGAAGCTATGAAGCA+CGG | + | chr2.2:39996515-39996534 | None:intergenic | 30.0% | |
| AAATGTACACTGTCTTCTAT+AGG | + | chr2.2:39997958-39997977 | None:intergenic | 30.0% | |
| AACATACAGTTTATCAGCTT+TGG | + | chr2.2:39995844-39995863 | None:intergenic | 30.0% | |
| AATTCTTGAAGACGATGAAA+AGG | - | chr2.2:39997868-39997887 | MS.gene033936:intron | 30.0% | |
| AGGGTAAACAATTCAATTAC+CGG | + | chr2.2:39997082-39997101 | None:intergenic | 30.0% | |
| ATAACCGCCAAAATGTAATT+TGG | + | chr2.2:39996640-39996659 | None:intergenic | 30.0% | |
| ATAATAAAACATAGGCTTCG+AGG | + | chr2.2:39998969-39998988 | None:intergenic | 30.0% | |
| ATAGCCTACTTAAAATAGGA+TGG | - | chr2.2:39998342-39998361 | MS.gene033936:intron | 30.0% | |
| ATCCCTAACTATATCTGAAA+TGG | + | chr2.2:39997477-39997496 | None:intergenic | 30.0% | |
| ATCTGCAGCATAAAATACAA+GGG | + | chr2.2:39997656-39997675 | None:intergenic | 30.0% | |
| ATTATCCCAAAGCAATTTGA+AGG | + | chr2.2:39997400-39997419 | None:intergenic | 30.0% | |
| ATTCAAAGGAATGGAACATA+AGG | - | chr2.2:39998767-39998786 | MS.gene033936:intron | 30.0% | |
| CAACTATGGGGTTATATATA+TGG | - | chr2.2:40001184-40001203 | MS.gene033936:intron | 30.0% | |
| CATCAACACAATTATGATTG+GGG | + | chr2.2:39997577-39997596 | None:intergenic | 30.0% | |
| CCTATGATCAAAATCAAGAT+TGG | + | chr2.2:39995947-39995966 | None:intergenic | 30.0% | |
| CTAATGAACTCTTCTTATTC+TGG | - | chr2.2:39996673-39996692 | MS.gene033936:intron | 30.0% | |
| GCATGAGGATAATAAAACAT+AGG | + | chr2.2:39998977-39998996 | None:intergenic | 30.0% | |
| GTTATTTAAATCGCTTGCAT+AGG | - | chr2.2:39997353-39997372 | MS.gene033936:intron | 30.0% | |
| TAAATCATCTGCAGATCATT+AGG | - | chr2.2:40001221-40001240 | MS.gene033936:intron | 30.0% | |
| TAACCAAACAATCACAAATG+TGG | + | chr2.2:39998463-39998482 | None:intergenic | 30.0% | |
| TATAACTGAATAGCTTCTTC+AGG | + | chr2.2:39997833-39997852 | None:intergenic | 30.0% | |
| TATACCATCCAAAACAAAGA+AGG | + | chr2.2:39997549-39997568 | None:intergenic | 30.0% | |
| TCTAGTTGTATTCACATGTT+TGG | + | chr2.2:39999744-39999763 | None:intergenic | 30.0% | |
| TTTATTATCCTCATGCATCT+TGG | - | chr2.2:39998981-39999000 | MS.gene033936:intron | 30.0% | |
| ! | AGAAATTCTTAGTCTTCCTT+TGG | - | chr2.2:39999560-39999579 | MS.gene033936:intron | 30.0% |
| ! | AGAAGACAGTGTACATTTTA+TGG | - | chr2.2:39997960-39997979 | MS.gene033936:intron | 30.0% |
| ! | AGTATTTGATTTAACTCCAC+CGG | - | chr2.2:39998651-39998670 | MS.gene033936:intron | 30.0% |
| ! | ATCCTATGAATATTTTGTCG+GGG | + | chr2.2:40000387-40000406 | None:intergenic | 30.0% |
| ! | ATGGTTTTCTATGTCGTTAA+TGG | - | chr2.2:39996859-39996878 | MS.gene033936:intron | 30.0% |
| ! | ATGTCCAAATTACATTTTGG+CGG | - | chr2.2:39996633-39996652 | MS.gene033936:intron | 30.0% |
| ! | CATCCTATGAATATTTTGTC+GGG | + | chr2.2:40000388-40000407 | None:intergenic | 30.0% |
| ! | CATTTGCTAAATACTCTGAA+AGG | - | chr2.2:39999533-39999552 | MS.gene033936:intron | 30.0% |
| ! | CTTTCAGAGTATTTAGCAAA+TGG | + | chr2.2:39999535-39999554 | None:intergenic | 30.0% |
| ! | GTTTTGCATCTTTGAATTCT+GGG | - | chr2.2:39999043-39999062 | MS.gene033936:intron | 30.0% |
| ! | TGTTTTGCATCTTTGAATTC+TGG | - | chr2.2:39999042-39999061 | MS.gene033936:intron | 30.0% |
| ! | TTATTCTAGAGAGACATATG+TGG | - | chr2.2:40000190-40000209 | MS.gene033936:CDS | 30.0% |
| ! | TTCTTAAATGAGTTGTTTCC+TGG | - | chr2.2:39998181-39998200 | MS.gene033936:intron | 30.0% |
| ! | TTTGGGATAATCTGTGTTTA+TGG | - | chr2.2:39997409-39997428 | MS.gene033936:intron | 30.0% |
| !! | CCAATCTTGATTTTGATCAT+AGG | - | chr2.2:39995944-39995963 | MS.gene033936:intron | 30.0% |
| !! | CTTTCCATCCTATTTTAAGT+AGG | + | chr2.2:39998349-39998368 | None:intergenic | 30.0% |
| !! | GTAAAGCTCATATTTTAGAG+GGG | - | chr2.2:39999253-39999272 | MS.gene033936:CDS | 30.0% |
| !! | TTACATTTTGGCGGTTATAT+TGG | - | chr2.2:39996642-39996661 | MS.gene033936:intron | 30.0% |
| !!! | TTGACTAGTTTTACTGGTTT+TGG | - | chr2.2:39999087-39999106 | MS.gene033936:intron | 30.0% |
| AAGTAAAACCAAGATGCATG+AGG | + | chr2.2:39998992-39999011 | None:intergenic | 35.0% | |
| AATCAATGGAACCCTTACAA+CGG | + | chr2.2:39998413-39998432 | None:intergenic | 35.0% | |
| AATCTCGTAAAGTAGATTCC+AGG | + | chr2.2:39998202-39998221 | None:intergenic | 35.0% | |
| ACATCTGACACTAAGTCTAA+AGG | - | chr2.2:39998676-39998695 | MS.gene033936:intron | 35.0% | |
| AGACCGCAAGGTAAAAAATT+TGG | + | chr2.2:40000932-40000951 | None:intergenic | 35.0% | |
| AGCTTCTATTCTATGATGCA+CGG | - | chr2.2:39996359-39996378 | MS.gene033936:intron | 35.0% | |
| AGTTGCAGACTTCTATCAAA+AGG | - | chr2.2:39996992-39997011 | MS.gene033936:intron | 35.0% | |
| ATAATTCAGCTGCAAAACGA+GGG | + | chr2.2:39997101-39997120 | None:intergenic | 35.0% | |
| ATACAACCTGCACTTATTGT+GGG | + | chr2.2:39998293-39998312 | None:intergenic | 35.0% | |
| ATTCTTTGCAAAAATCAGGC+CGG | - | chr2.2:39997265-39997284 | MS.gene033936:intron | 35.0% | |
| CAACATCAACATGTGATCTA+TGG | - | chr2.2:40000070-40000089 | MS.gene033936:CDS | 35.0% | |
| CAAGTTTCTTTCTGCTTACA+CGG | - | chr2.2:40000688-40000707 | MS.gene033936:intron | 35.0% | |
| CAGTGAATCTTCATCATCTT+CGG | + | chr2.2:40001299-40001318 | None:intergenic | 35.0% | |
| CATAGATCACATGTTGATGT+TGG | + | chr2.2:40000072-40000091 | None:intergenic | 35.0% | |
| CATCTGCAGCATAAAATACA+AGG | + | chr2.2:39997657-39997676 | None:intergenic | 35.0% | |
| CCTTGGATTCAATTTGTGAA+AGG | + | chr2.2:39999818-39999837 | None:intergenic | 35.0% | |
| CCTTTCACAAATTGAATCCA+AGG | - | chr2.2:39999815-39999834 | MS.gene033936:intron | 35.0% | |
| CTACCTAAGAACTGAATAGT+GGG | - | chr2.2:39998879-39998898 | MS.gene033936:intron | 35.0% | |
| CTCTAGCTATAGAAACTTCT+CGG | - | chr2.2:40000839-40000858 | MS.gene033936:intron | 35.0% | |
| CTGTAAAGAACAGCATAACA+AGG | + | chr2.2:40000040-40000059 | None:intergenic | 35.0% | |
| GGAAAACAAAGAAGCAAAGA+CGG | + | chr2.2:40000346-40000365 | None:intergenic | 35.0% | |
| GGATGATATGAGTGTTTCTT+TGG | - | chr2.2:39997374-39997393 | MS.gene033936:intron | 35.0% | |
| GGGTAAACAATTCAATTACC+GGG | + | chr2.2:39997081-39997100 | None:intergenic | 35.0% | |
| GTAATCAGTGTTGTCAATTG+CGG | - | chr2.2:39996276-39996295 | MS.gene033936:intron | 35.0% | |
| GTATTTCAAGAGTGAGTACA+GGG | + | chr2.2:40001075-40001094 | None:intergenic | 35.0% | |
| GTGACATTTATGCTACACAA+CGG | - | chr2.2:39999141-39999160 | MS.gene033936:intron | 35.0% | |
| TAAAGAACAGCATAACAAGG+AGG | + | chr2.2:40000037-40000056 | None:intergenic | 35.0% | |
| TACTAAACAAAGATCCTAGC+CGG | + | chr2.2:39997287-39997306 | None:intergenic | 35.0% | |
| TAGAGAGACATATGTGGAAT+GGG | - | chr2.2:40000196-40000215 | MS.gene033936:CDS | 35.0% | |
| TATAATTCAGCTGCAAAACG+AGG | + | chr2.2:39997102-39997121 | None:intergenic | 35.0% | |
| TATACACACTAGTTACAGCA+CGG | + | chr2.2:39997916-39997935 | None:intergenic | 35.0% | |
| TCATAGAATAGAAGCTACAG+CGG | + | chr2.2:39996355-39996374 | None:intergenic | 35.0% | |
| TCTTTACTGTTTCAAGGGTT+AGG | - | chr2.2:40000949-40000968 | MS.gene033936:CDS | 35.0% | |
| TGCTACTGTTCTTTATGAAC+AGG | - | chr2.2:39996184-39996203 | MS.gene033936:intron | 35.0% | |
| TGTAACACAAACTTTAGCCT+TGG | + | chr2.2:39999835-39999854 | None:intergenic | 35.0% | |
| TTAAGGCAAGCTGAATCATA+AGG | + | chr2.2:40001001-40001020 | None:intergenic | 35.0% | |
| TTGGTACTACTATAATTCGC+AGG | + | chr2.2:39995928-39995947 | None:intergenic | 35.0% | |
| ! | AGCTTTCTCATACGCTATTT+TGG | + | chr2.2:39996740-39996759 | None:intergenic | 35.0% |
| ! | CAAACTGTTTTCATGCTCTT+TGG | + | chr2.2:39998834-39998853 | None:intergenic | 35.0% |
| ! | CTGTGTTTATGGTCTTTTAC+TGG | - | chr2.2:39997420-39997439 | MS.gene033936:intron | 35.0% |
| ! | CTTTTCGACAAGCATACATT+TGG | - | chr2.2:40000493-40000512 | MS.gene033936:intron | 35.0% |
| ! | GTTGACTTACATACTTCCTT+GGG | - | chr2.2:39999364-39999383 | MS.gene033936:intron | 35.0% |
| ! | TTTATGGTCTTTTACTGGTG+TGG | - | chr2.2:39997425-39997444 | MS.gene033936:intron | 35.0% |
| ! | TTTGGCCTTCAAATTGCTTT+GGG | - | chr2.2:39997392-39997411 | MS.gene033936:intron | 35.0% |
| !! | TGTTGACTTACATACTTCCT+TGG | - | chr2.2:39999363-39999382 | MS.gene033936:intron | 35.0% |
| !! | TTTTTGGATTGGAGTCCTTT+GGG | - | chr2.2:39997312-39997331 | MS.gene033936:intron | 35.0% |
| !!! | GTCTTGTTTTTCTCCTAAGT+TGG | + | chr2.2:39998624-39998643 | None:intergenic | 35.0% |
| !!! | GTTTCCTTCTTTGTTTTGGA+TGG | - | chr2.2:39997542-39997561 | MS.gene033936:intron | 35.0% |
| !!! | TTTTAGTTCCACTAAAAGGG+TGG | - | chr2.2:39998806-39998825 | MS.gene033936:intron | 35.0% |
| AAGAAGCAAAGACGGTGTAA+AGG | + | chr2.2:40000338-40000357 | None:intergenic | 40.0% | |
| AATTTGTGAAAGGACCACGT+TGG | + | chr2.2:39999808-39999827 | None:intergenic | 40.0% | |
| ACAACGTGTACCCTTCATTA+CGG | + | chr2.2:39996838-39996857 | None:intergenic | 40.0% | |
| ACAATAAGCACTCCGTTGTA+AGG | - | chr2.2:39998398-39998417 | MS.gene033936:intron | 40.0% | |
| ACCACATCATTGTAGCGTAT+CGG | + | chr2.2:39996331-39996350 | None:intergenic | 40.0% | |
| ACTGTTCTTTATGAACAGGC+TGG | - | chr2.2:39996188-39996207 | MS.gene033936:intron | 40.0% | |
| AGAAGCAAAGACGGTGTAAA+GGG | + | chr2.2:40000337-40000356 | None:intergenic | 40.0% | |
| AGTCAACAAAATCTGGTCCA+AGG | + | chr2.2:39999073-39999092 | None:intergenic | 40.0% | |
| ATAAAACATAGGCTTCGAGG+AGG | + | chr2.2:39998966-39998985 | None:intergenic | 40.0% | |
| ATAAGCCTGCATTCATGACA+AGG | + | chr2.2:39999929-39999948 | None:intergenic | 40.0% | |
| ATAGCGGCTATCTGATAACA+CGG | - | chr2.2:39996601-39996620 | MS.gene033936:intron | 40.0% | |
| ATGCATTGCTAGTCACTATC+CGG | + | chr2.2:40001108-40001127 | None:intergenic | 40.0% | |
| CAATAAGCACTCCGTTGTAA+GGG | - | chr2.2:39998399-39998418 | MS.gene033936:intron | 40.0% | |
| CATACAACCTGCACTTATTG+TGG | + | chr2.2:39998294-39998313 | None:intergenic | 40.0% | |
| CGAAGATGATGAAGATTCAC+TGG | - | chr2.2:40001297-40001316 | MS.gene033936:CDS | 40.0% | |
| CTAGAGAGACATATGTGGAA+TGG | - | chr2.2:40000195-40000214 | MS.gene033936:CDS | 40.0% | |
| CTTATTCTGGTGTAGCGAAT+GGG | - | chr2.2:39996686-39996705 | MS.gene033936:intron | 40.0% | |
| GAACAAAACTCAGTCTCACT+AGG | - | chr2.2:39996141-39996160 | MS.gene033936:intron | 40.0% | |
| GAGTGCTTATTGTAGCTTCA+TGG | + | chr2.2:39998391-39998410 | None:intergenic | 40.0% | |
| GATCACATGTTGATGTTGGT+TGG | + | chr2.2:40000068-40000087 | None:intergenic | 40.0% | |
| GATCCCACTATTCAGTTCTT+AGG | + | chr2.2:39998885-39998904 | None:intergenic | 40.0% | |
| GATGTGAGTGCATTAAAGAC+TGG | - | chr2.2:40001268-40001287 | MS.gene033936:intron | 40.0% | |
| GCTACCTAAGAACTGAATAG+TGG | - | chr2.2:39998878-39998897 | MS.gene033936:intron | 40.0% | |
| GCTTAAAGTCGTGAGCATAA+AGG | + | chr2.2:39999972-39999991 | None:intergenic | 40.0% | |
| GGACCACATTTGTGATTGTT+TGG | - | chr2.2:39998457-39998476 | MS.gene033936:intron | 40.0% | |
| GGTATTTCAAGAGTGAGTAC+AGG | + | chr2.2:40001076-40001095 | None:intergenic | 40.0% | |
| GTACTACTATAATTCGCAGG+TGG | + | chr2.2:39995925-39995944 | None:intergenic | 40.0% | |
| GTCACTATCCGGTAATAACA+AGG | + | chr2.2:40001097-40001116 | None:intergenic | 40.0% | |
| GTGCTCATGACTGTTTCAAA+AGG | - | chr2.2:39997447-39997466 | MS.gene033936:intron | 40.0% | |
| GTTGTATTCACATGTTTGGC+TGG | + | chr2.2:39999740-39999759 | None:intergenic | 40.0% | |
| TAAATGCTTGTGGTGTCTGT+AGG | - | chr2.2:40000624-40000643 | MS.gene033936:intron | 40.0% | |
| TACAGCACGGTATAGATCAA+AGG | + | chr2.2:39997903-39997922 | None:intergenic | 40.0% | |
| TAGCTAAGGAACTTAGCAAC+TGG | - | chr2.2:39996964-39996983 | MS.gene033936:intron | 40.0% | |
| TCAGTTTCTGCCGTAATGAA+GGG | - | chr2.2:39996825-39996844 | MS.gene033936:intron | 40.0% | |
| TCTTATTCTGGTGTAGCGAA+TGG | - | chr2.2:39996685-39996704 | MS.gene033936:intron | 40.0% | |
| TGACAAGTTAACCAGACCTT+GGG | - | chr2.2:39996908-39996927 | MS.gene033936:intron | 40.0% | |
| TGCCATATGCAATCCTATCA+GGG | + | chr2.2:39997220-39997239 | None:intergenic | 40.0% | |
| TGCCCCGACAAAATATTCAT+AGG | - | chr2.2:40000382-40000401 | MS.gene033936:CDS | 40.0% | |
| TGCGGTCTTTACTGTTTCAA+GGG | - | chr2.2:40000944-40000963 | MS.gene033936:CDS | 40.0% | |
| TGCTTGTCGAAAAGAAACTC+TGG | + | chr2.2:40000487-40000506 | None:intergenic | 40.0% | |
| TTCAGTTTCTGCCGTAATGA+AGG | - | chr2.2:39996824-39996843 | MS.gene033936:intron | 40.0% | |
| TTCATTCCCACAATAAGTGC+AGG | - | chr2.2:39998284-39998303 | MS.gene033936:intron | 40.0% | |
| TTGAAACAGTAAAGACCGCA+AGG | + | chr2.2:40000944-40000963 | None:intergenic | 40.0% | |
| TTGACAAGTTAACCAGACCT+TGG | - | chr2.2:39996907-39996926 | MS.gene033936:intron | 40.0% | |
| TTGCCATATGCAATCCTATC+AGG | + | chr2.2:39997221-39997240 | None:intergenic | 40.0% | |
| TTGCGGTCTTTACTGTTTCA+AGG | - | chr2.2:40000943-40000962 | MS.gene033936:CDS | 40.0% | |
| TTTCCCTCTATGTAGTGCTT+TGG | - | chr2.2:39997796-39997815 | MS.gene033936:intron | 40.0% | |
| TTTCTTTCTGCTTACACGGA+TGG | - | chr2.2:40000692-40000711 | MS.gene033936:intron | 40.0% | |
| ! | AAAGCACTACATAGAGGGAA+AGG | + | chr2.2:39997797-39997816 | None:intergenic | 40.0% |
| ! | AGCTTTGGCTAACAACTTGT+GGG | + | chr2.2:39995829-39995848 | None:intergenic | 40.0% |
| ! | CTTCCAAAGCACTACATAGA+GGG | + | chr2.2:39997802-39997821 | None:intergenic | 40.0% |
| ! | CTTTGGCCTTCAAATTGCTT+TGG | - | chr2.2:39997391-39997410 | MS.gene033936:intron | 40.0% |
| ! | TCTTAACTAGGTGTGTCACT+GGG | - | chr2.2:39999202-39999221 | MS.gene033936:CDS | 40.0% |
| ! | TCTTCCAAAGCACTACATAG+AGG | + | chr2.2:39997803-39997822 | None:intergenic | 40.0% |
| !! | AAAGGCATCTGAGTTGTACA+TGG | - | chr2.2:39997010-39997029 | MS.gene033936:intron | 40.0% |
| !! | AAGGTCTGGTTAACTTGTCA+AGG | + | chr2.2:39996908-39996927 | None:intergenic | 40.0% |
| !! | AGTCCTTTGGGATATTTGGT+TGG | - | chr2.2:39997324-39997343 | MS.gene033936:intron | 40.0% |
| !! | GTCCTTTGGGATATTTGGTT+GGG | - | chr2.2:39997325-39997344 | MS.gene033936:intron | 40.0% |
| !! | GTTTTTGGATTGGAGTCCTT+TGG | - | chr2.2:39997311-39997330 | MS.gene033936:intron | 40.0% |
| !! | TCCTTTGGGATATTTGGTTG+GGG | - | chr2.2:39997326-39997345 | MS.gene033936:intron | 40.0% |
| !! | TTGGAGTCCTTTGGGATATT+TGG | - | chr2.2:39997320-39997339 | MS.gene033936:intron | 40.0% |
| !!! | ACGCTATTTTGGCTTTCTCA+TGG | + | chr2.2:39996729-39996748 | None:intergenic | 40.0% |
| AAGACGGTGTAAAGGGTCAA+CGG | + | chr2.2:40000330-40000349 | None:intergenic | 45.0% | |
| AAGCTAAATCACTCACTGCG+TGG | + | chr2.2:40000772-40000791 | None:intergenic | 45.0% | |
| AAGTTCCTTAGCTAGAGCAG+CGG | + | chr2.2:39996958-39996977 | None:intergenic | 45.0% | |
| ACACACCTTGTCATGAATGC+AGG | - | chr2.2:39999921-39999940 | MS.gene033936:intron | 45.0% | |
| ATGAAGCACGGATACAGACA+CGG | + | chr2.2:39996503-39996522 | None:intergenic | 45.0% | |
| CAAAACTCAGTCTCACTAGG+TGG | - | chr2.2:39996144-39996163 | MS.gene033936:intron | 45.0% | |
| CAACAAAATCTGGTCCAAGG+AGG | + | chr2.2:39999070-39999089 | None:intergenic | 45.0% | |
| CACTGGGGAGACAAAGAATT+TGG | - | chr2.2:39999218-39999237 | MS.gene033936:CDS | 45.0% | |
| CCAAACCTTGGACTGACTAT+TGG | + | chr2.2:39999469-39999488 | None:intergenic | 45.0% | |
| CCAATAGTCAGTCCAAGGTT+TGG | - | chr2.2:39999466-39999485 | MS.gene033936:intron | 45.0% | |
| CTCTTAACTAGGTGTGTCAC+TGG | - | chr2.2:39999201-39999220 | MS.gene033936:CDS | 45.0% | |
| CTGAATAGCTTCTTCAGGCA+TGG | + | chr2.2:39997828-39997847 | None:intergenic | 45.0% | |
| CTGAGTTGTACATGGAGTGT+GGG | - | chr2.2:39997018-39997037 | MS.gene033936:intron | 45.0% | |
| CTTACATACTTCCTTGGGCA+TGG | - | chr2.2:39999369-39999388 | MS.gene033936:intron | 45.0% | |
| GACTTAGTGTCAGATGTGAC+CGG | + | chr2.2:39998673-39998692 | None:intergenic | 45.0% | |
| GCATCATCCCTGTTGAGATT+GGG | - | chr2.2:39999417-39999436 | MS.gene033936:intron | 45.0% | |
| GCATCTGATGCTCTTGCAAA+GGG | - | chr2.2:39997053-39997072 | MS.gene033936:intron | 45.0% | |
| GCGTATGAGAAAGCTTCACA+AGG | - | chr2.2:39996745-39996764 | MS.gene033936:intron | 45.0% | |
| GCTTTGGCTAACAACTTGTG+GGG | + | chr2.2:39995828-39995847 | None:intergenic | 45.0% | |
| GGCTGCTTGTCAACAATATC+AGG | - | chr2.2:40000860-40000879 | MS.gene033936:intron | 45.0% | |
| GGGCAAGAAGAAAATGGAGT+TGG | + | chr2.2:40000367-40000386 | None:intergenic | 45.0% | |
| TAATTCGCAGGTGGAATCTG+CGG | + | chr2.2:39995916-39995935 | None:intergenic | 45.0% | |
| TAGCGGCTATCTGATAACAC+GGG | - | chr2.2:39996602-39996621 | MS.gene033936:intron | 45.0% | |
| TATGATGCACGGACACTTCT+CGG | - | chr2.2:39996370-39996389 | MS.gene033936:intron | 45.0% | |
| TCCGATACGCTACAATGATG+TGG | - | chr2.2:39996327-39996346 | MS.gene033936:intron | 45.0% | |
| TCTGAGTTGTACATGGAGTG+TGG | - | chr2.2:39997017-39997036 | MS.gene033936:intron | 45.0% | |
| TGCATCATCCCTGTTGAGAT+TGG | - | chr2.2:39999416-39999435 | MS.gene033936:intron | 45.0% | |
| TGCATCTGATGCTCTTGCAA+AGG | - | chr2.2:39997052-39997071 | MS.gene033936:intron | 45.0% | |
| TGCCCTGATAGGATTGCATA+TGG | - | chr2.2:39997215-39997234 | MS.gene033936:intron | 45.0% | |
| TGCTACCAATAGTCAGTCCA+AGG | - | chr2.2:39999461-39999480 | MS.gene033936:intron | 45.0% | |
| TTGTCGGGGCAAGAAGAAAA+TGG | + | chr2.2:40000373-40000392 | None:intergenic | 45.0% | |
| TTTGAATTCTGGGTCCTCCT+TGG | - | chr2.2:39999053-39999072 | MS.gene033936:intron | 45.0% | |
| ! | ACTTGCTAGCACAACGATTG+TGG | + | chr2.2:40000673-40000692 | None:intergenic | 45.0% |
| ! | ATGAAGGGTACACGTTGTCA+TGG | - | chr2.2:39996840-39996859 | MS.gene033936:intron | 45.0% |
| ! | CAGCTTTGGCTAACAACTTG+TGG | + | chr2.2:39995830-39995849 | None:intergenic | 45.0% |
| ! | CTTAACTAGGTGTGTCACTG+GGG | - | chr2.2:39999203-39999222 | MS.gene033936:CDS | 45.0% |
| ! | GAGTGAGTACAGGGTTTGTT+TGG | + | chr2.2:40001066-40001085 | None:intergenic | 45.0% |
| ! | TTTGTAAGGGGCATGAGTCA+TGG | + | chr2.2:39999171-39999190 | None:intergenic | 45.0% |
| !! | CTTTGGTTCCACCCTTTTAG+TGG | + | chr2.2:39998817-39998836 | None:intergenic | 45.0% |
| !! | TTTGCAAGAGCATCAGATGC+AGG | + | chr2.2:39997053-39997072 | None:intergenic | 45.0% |
| !! | TTTGGCTTTCTCATGGTTCC+TGG | + | chr2.2:39996722-39996741 | None:intergenic | 45.0% |
| !!! | TTTTATTATTTATTCTAAAT+AGG | - | chr2.2:39996044-39996063 | MS.gene033936:intron | 5.0% |
| AATGCACTCACATCGCCTGT+TGG | + | chr2.2:40001262-40001281 | None:intergenic | 50.0% | |
| ACTCACTGCGTGGTCAAGAT+GGG | + | chr2.2:40000762-40000781 | None:intergenic | 50.0% | |
| ATCCCTGTTGAGATTGGGCT+TGG | - | chr2.2:39999422-39999441 | MS.gene033936:intron | 50.0% | |
| ATGTGCTTAGCTGCATCCCA+AGG | + | chr2.2:39996927-39996946 | None:intergenic | 50.0% | |
| CATAGTGCGAATGCCCTGAT+AGG | - | chr2.2:39997204-39997223 | MS.gene033936:intron | 50.0% | |
| CGAGGAGGAAGATAAAAGCG+TGG | + | chr2.2:39998951-39998970 | None:intergenic | 50.0% | |
| CTTGCGAGGAAACTTCCAAC+AGG | - | chr2.2:40001244-40001263 | MS.gene033936:intron | 50.0% | |
| GCCCCAACCAAATATCCCAA+AGG | + | chr2.2:39997330-39997349 | None:intergenic | 50.0% | |
| GGCTAACAACTTGTGGGGAT+CGG | + | chr2.2:39995823-39995842 | None:intergenic | 50.0% | |
| TAACAACTTGTGGGGATCGG+AGG | + | chr2.2:39995820-39995839 | None:intergenic | 50.0% | |
| TGCAGATCATTAGGCTTGCG+AGG | - | chr2.2:40001230-40001249 | MS.gene033936:intron | 50.0% | |
| TGTGCATCAAACCATGCCCA+AGG | + | chr2.2:39999383-39999402 | None:intergenic | 50.0% | |
| TGTGTTTAACCGCTCCAACG+TGG | - | chr2.2:39999791-39999810 | MS.gene033936:intron | 50.0% | |
| TTAGTGTCAGATGTGACCGG+TGG | + | chr2.2:39998670-39998689 | None:intergenic | 50.0% | |
| TTGCAAAAATCAGGCCGGCT+AGG | - | chr2.2:39997270-39997289 | MS.gene033936:intron | 50.0% | |
| TTGGGATGCAGCTAAGCACA+TGG | - | chr2.2:39996926-39996945 | MS.gene033936:intron | 50.0% | |
| ! | AGAGCATCAGATGCAGGTTG+TGG | + | chr2.2:39997047-39997066 | None:intergenic | 50.0% |
| ! | GGAGGAAGATAAAAGCGTGG+TGG | + | chr2.2:39998948-39998967 | None:intergenic | 50.0% |
| ! | TTCTCGGATTAGGTGTGTCG+CGG | - | chr2.2:39996386-39996405 | MS.gene033936:CDS | 50.0% |
| ! | TTGCGGATTGCGTGCAATAG+TGG | - | chr2.2:39996293-39996312 | MS.gene033936:intron | 50.0% |
| !! | TCACTAGGTGGAGTGCTGAT+TGG | - | chr2.2:39996156-39996175 | MS.gene033936:intron | 50.0% |
| ATCTGCCGCTGCTCTAGCTA+AGG | - | chr2.2:39996950-39996969 | MS.gene033936:intron | 55.0% | |
| ATGCTCTTGCAAAGGGAGCC+CGG | - | chr2.2:39997060-39997079 | MS.gene033936:intron | 55.0% | |
| CACGGATACAGACACGGACA+CGG | + | chr2.2:39996497-39996516 | None:intergenic | 55.0% | |
| CACTCACTGCGTGGTCAAGA+TGG | + | chr2.2:40000763-40000782 | None:intergenic | 55.0% | |
| CCTGTTGAGATTGGGCTTGG+CGG | - | chr2.2:39999425-39999444 | MS.gene033936:intron | 55.0% | |
| CGCCAAGCCCAATCTCAACA+GGG | + | chr2.2:39999427-39999446 | None:intergenic | 55.0% | |
| CGGCTATCTGATAACACGGG+TGG | - | chr2.2:39996605-39996624 | MS.gene033936:intron | 55.0% | |
| CTTAGCTGCATCCCAAGGTC+TGG | + | chr2.2:39996922-39996941 | None:intergenic | 55.0% | |
| GCACGGACACTTCTCGGATT+AGG | - | chr2.2:39996376-39996395 | MS.gene033936:CDS | 55.0% | |
| GTGAAAGGACCACGTTGGAG+CGG | + | chr2.2:39999803-39999822 | None:intergenic | 55.0% | |
| ! | CGAATGGGTTTAGAGCTGCC+AGG | - | chr2.2:39996701-39996720 | MS.gene033936:intron | 55.0% |
| CAACTTGTGGGGATCGGAGG+AGG | + | chr2.2:39995817-39995836 | None:intergenic | 60.0% | |
| CCGCCAAGCCCAATCTCAAC+AGG | + | chr2.2:39999428-39999447 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 39995810 | 40001339 | 39995810 | ID=MS.gene033936 |
| chr2.2 | mRNA | 39995810 | 40001339 | 39995810 | ID=MS.gene033936.t1;Parent=MS.gene033936 |
| chr2.2 | exon | 40001293 | 40001339 | 40001293 | ID=MS.gene033936.t1.exon1;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 40001293 | 40001339 | 40001293 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 40000940 | 40001007 | 40000940 | ID=MS.gene033936.t1.exon2;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 40000940 | 40001007 | 40000940 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 40000364 | 40000448 | 40000364 | ID=MS.gene033936.t1.exon3;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 40000364 | 40000448 | 40000364 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 40000068 | 40000226 | 40000068 | ID=MS.gene033936.t1.exon4;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 40000068 | 40000226 | 40000068 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 39999201 | 39999338 | 39999201 | ID=MS.gene033936.t1.exon5;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 39999201 | 39999338 | 39999201 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 39997667 | 39997745 | 39997667 | ID=MS.gene033936.t1.exon6;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 39997667 | 39997745 | 39997667 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 39997127 | 39997206 | 39997127 | ID=MS.gene033936.t1.exon7;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 39997127 | 39997206 | 39997127 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 39996374 | 39996503 | 39996374 | ID=MS.gene033936.t1.exon8;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 39996374 | 39996503 | 39996374 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| chr2.2 | exon | 39995810 | 39995914 | 39995810 | ID=MS.gene033936.t1.exon9;Parent=MS.gene033936.t1 |
| chr2.2 | CDS | 39995810 | 39995914 | 39995810 | ID=cds.MS.gene033936.t1;Parent=MS.gene033936.t1 |
| Gene Sequence |
| Protein sequence |
