Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033977.t1 | PNY02171.1 | 56.9 | 339 | 108 | 5 | 1 | 307 | 44 | 376 | 3.80E-74 | 288.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033977.t1 | Q9FHE1 | 37.6 | 218 | 122 | 7 | 21 | 228 | 246 | 459 | 3.3e-26 | 120.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033977.t1 | A0A2K3NGK5 | 56.9 | 339 | 108 | 5 | 1 | 307 | 44 | 376 | 2.8e-74 | 288.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033977 | MS.gene029093 | PPI |
| MS.gene97346 | MS.gene033977 | PPI |
| MS.gene90825 | MS.gene033977 | PPI |
| MS.gene066439 | MS.gene033977 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033977.t1 | MTR_7g088160 | 37.975 | 316 | 163 | 5 | 19 | 307 | 76 | 385 | 5.82e-68 | 218 |
| MS.gene033977.t1 | MTR_4g063670 | 42.812 | 313 | 159 | 7 | 10 | 307 | 9 | 316 | 8.85e-66 | 209 |
| MS.gene033977.t1 | MTR_0867s0010 | 43.987 | 316 | 156 | 7 | 7 | 307 | 7 | 316 | 5.20e-63 | 202 |
| MS.gene033977.t1 | MTR_7g107340 | 43.234 | 303 | 130 | 6 | 8 | 307 | 68 | 331 | 1.56e-61 | 199 |
| MS.gene033977.t1 | MTR_4g083510 | 40.777 | 309 | 161 | 9 | 14 | 307 | 16 | 317 | 1.92e-52 | 175 |
| MS.gene033977.t1 | MTR_7g114170 | 36.545 | 301 | 125 | 6 | 7 | 307 | 52 | 286 | 2.22e-41 | 145 |
| MS.gene033977.t1 | MTR_6g081150 | 37.500 | 240 | 80 | 6 | 1 | 240 | 1 | 170 | 2.01e-39 | 137 |
| MS.gene033977.t1 | MTR_1g051185 | 39.336 | 211 | 93 | 7 | 10 | 215 | 9 | 189 | 5.14e-36 | 131 |
| MS.gene033977.t1 | MTR_3g069460 | 43.537 | 147 | 81 | 2 | 24 | 168 | 26 | 172 | 4.50e-35 | 125 |
| MS.gene033977.t1 | MTR_8g015750 | 34.450 | 209 | 96 | 7 | 114 | 307 | 1 | 183 | 8.82e-22 | 91.3 |
| MS.gene033977.t1 | MTR_4g046740 | 36.364 | 121 | 67 | 3 | 187 | 307 | 23 | 133 | 1.03e-14 | 70.5 |
| MS.gene033977.t1 | MTR_4g026120 | 26.087 | 207 | 132 | 3 | 18 | 218 | 53 | 244 | 3.82e-14 | 72.4 |
| MS.gene033977.t1 | MTR_4g036435 | 26.087 | 207 | 132 | 3 | 18 | 218 | 53 | 244 | 3.82e-14 | 72.4 |
| MS.gene033977.t1 | MTR_3g067785 | 26.471 | 204 | 129 | 3 | 21 | 218 | 56 | 244 | 4.01e-14 | 72.4 |
| MS.gene033977.t1 | MTR_5g066280 | 26.087 | 207 | 132 | 3 | 18 | 218 | 53 | 244 | 4.24e-14 | 72.4 |
| MS.gene033977.t1 | MTR_4g013220 | 26.471 | 204 | 129 | 3 | 21 | 218 | 56 | 244 | 5.73e-14 | 72.0 |
| MS.gene033977.t1 | MTR_6g051405 | 27.219 | 169 | 116 | 4 | 6 | 168 | 84 | 251 | 1.03e-13 | 71.6 |
| MS.gene033977.t1 | MTR_2g072860 | 26.627 | 169 | 117 | 4 | 6 | 168 | 16 | 183 | 1.57e-13 | 70.5 |
| MS.gene033977.t1 | MTR_3g450670 | 25.143 | 175 | 120 | 3 | 5 | 168 | 73 | 247 | 3.19e-13 | 70.1 |
| MS.gene033977.t1 | MTR_1g471070 | 25.143 | 175 | 120 | 3 | 5 | 168 | 73 | 247 | 3.19e-13 | 70.1 |
| MS.gene033977.t1 | MTR_1g106885 | 26.087 | 207 | 132 | 3 | 18 | 218 | 114 | 305 | 4.84e-13 | 69.7 |
| MS.gene033977.t1 | MTR_2g022120 | 26.087 | 207 | 132 | 3 | 18 | 218 | 117 | 308 | 5.02e-13 | 69.7 |
| MS.gene033977.t1 | MTR_7g062380 | 25.000 | 180 | 120 | 2 | 38 | 217 | 14 | 178 | 6.44e-13 | 68.2 |
| MS.gene033977.t1 | MTR_3g464170 | 26.627 | 169 | 117 | 4 | 6 | 168 | 84 | 251 | 6.56e-13 | 68.9 |
| MS.gene033977.t1 | MTR_1g100375 | 26.627 | 169 | 117 | 4 | 6 | 168 | 84 | 251 | 6.56e-13 | 68.9 |
| MS.gene033977.t1 | MTR_8g015740 | 48.684 | 76 | 37 | 1 | 7 | 80 | 55 | 130 | 6.77e-13 | 65.1 |
| MS.gene033977.t1 | MTR_7g461350 | 26.036 | 169 | 118 | 4 | 6 | 168 | 84 | 251 | 8.50e-13 | 68.9 |
| MS.gene033977.t1 | MTR_6g016670 | 26.036 | 169 | 118 | 4 | 6 | 168 | 84 | 251 | 8.50e-13 | 68.9 |
| MS.gene033977.t1 | MTR_3g464310 | 26.036 | 169 | 118 | 4 | 6 | 168 | 84 | 251 | 8.50e-13 | 68.9 |
| MS.gene033977.t1 | MTR_6g453050 | 25.405 | 185 | 124 | 4 | 15 | 186 | 50 | 233 | 1.11e-12 | 68.2 |
| MS.gene033977.t1 | MTR_6g092533 | 26.115 | 157 | 110 | 1 | 18 | 168 | 117 | 273 | 1.20e-12 | 68.6 |
| MS.gene033977.t1 | MTR_7g083520 | 26.797 | 153 | 104 | 3 | 21 | 166 | 30 | 181 | 1.27e-12 | 67.8 |
| MS.gene033977.t1 | MTR_5g077245 | 26.797 | 153 | 106 | 1 | 22 | 168 | 110 | 262 | 1.60e-12 | 68.2 |
| MS.gene033977.t1 | MTR_1g086750 | 26.923 | 130 | 95 | 0 | 38 | 167 | 14 | 143 | 7.94e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033977.t1 | AT5G41220 | 36.638 | 232 | 133 | 8 | 7 | 228 | 174 | 401 | 9.23e-32 | 124 |
| MS.gene033977.t1 | AT5G41220 | 36.638 | 232 | 133 | 8 | 7 | 228 | 182 | 409 | 1.02e-31 | 124 |
| MS.gene033977.t1 | AT5G41220 | 36.638 | 232 | 133 | 8 | 7 | 228 | 232 | 459 | 1.22e-31 | 124 |
| MS.gene033977.t1 | AT5G41240 | 36.816 | 201 | 113 | 7 | 37 | 226 | 261 | 458 | 1.37e-26 | 110 |
| MS.gene033977.t1 | AT3G47680 | 39.850 | 133 | 77 | 2 | 38 | 168 | 38 | 169 | 2.39e-24 | 100 |
| MS.gene033977.t1 | AT1G66235 | 28.947 | 190 | 117 | 5 | 50 | 224 | 7 | 193 | 2.55e-12 | 66.6 |
Find 62 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCAATTCTCTACTCAAAT+TGG | 0.240436 | 4.3:-84707139 | MS.gene033977:CDS |
| AATTGCATCTCCCTTCCATT+TGG | 0.301545 | 4.3:+84706700 | None:intergenic |
| ATTGCATCTCCCTTCCATTT+GGG | 0.325205 | 4.3:+84706701 | None:intergenic |
| ATTCTCACTCTCCCTTGCTT+TGG | 0.347043 | 4.3:+84706397 | None:intergenic |
| GAATTGCGACATGTCGTTAC+CGG | 0.373955 | 4.3:+84707153 | None:intergenic |
| GAACATTCAATAGGTGTTCC+TGG | 0.375216 | 4.3:+84706617 | None:intergenic |
| TCTAGCGGTGGTGTGGATTC+CGG | 0.384319 | 4.3:-84707172 | MS.gene033977:CDS |
| ATTTCGAAGGACTCAATTGT+TGG | 0.421062 | 4.3:-84707004 | MS.gene033977:CDS |
| GAAAATATTAAGCTCGATGA+AGG | 0.423359 | 4.3:-84707112 | MS.gene033977:CDS |
| GGCCGTATTCAGAAGTTTGT+TGG | 0.432458 | 4.3:-84706863 | MS.gene033977:CDS |
| GAACAAAGATTTCTAGTAGT+GGG | 0.434054 | 4.3:-84706661 | MS.gene033977:CDS |
| AATTCCTTCATGTGCATGCT+TGG | 0.435032 | 4.3:-84706742 | MS.gene033977:CDS |
| ATAGAAATGTTATCATGTTA+AGG | 0.443110 | 4.3:-84706466 | MS.gene033977:CDS |
| TCAGACAAGCCTTGGGTAGT+TGG | 0.443224 | 4.3:+84702546 | None:intergenic |
| GCTCGATATCACCGTTTGAA+TGG | 0.444599 | 4.3:-84706884 | MS.gene033977:CDS |
| GTTATTAATCAGACAAGCCT+TGG | 0.450748 | 4.3:+84702538 | None:intergenic |
| ACACACTTCTATTTCAATCA+TGG | 0.464422 | 4.3:-84707033 | MS.gene033977:CDS |
| TCATAGTCTGAACATTCAAT+AGG | 0.474267 | 4.3:+84706608 | None:intergenic |
| TCACCAGTGGTCCGTCCAAT+GGG | 0.486184 | 4.3:-84706578 | MS.gene033977:CDS |
| TGTCCCATTGGACGGACCAC+TGG | 0.491106 | 4.3:+84706575 | None:intergenic |
| GCCCTTAATCAAAACAAAAG+TGG | 0.500880 | 4.3:-84706827 | MS.gene033977:CDS |
| ATCACCAGTGGTCCGTCCAA+TGG | 0.508407 | 4.3:-84706579 | MS.gene033977:CDS |
| AGCCAACAAACTTCTGAATA+CGG | 0.508865 | 4.3:+84706861 | None:intergenic |
| TCTGAATACGGCCATTCAAA+CGG | 0.525249 | 4.3:+84706873 | None:intergenic |
| GATGGCTGAAGCAAGGGAAA+AGG | 0.525675 | 4.3:-84706444 | MS.gene033977:CDS |
| TATGTGGTGTAGGCCTCCAA+TGG | 0.529583 | 4.3:-84707197 | MS.gene033977:CDS |
| TATTGAAAGATGAACCCAAA+TGG | 0.531109 | 4.3:-84706715 | MS.gene033977:CDS |
| TAATGTTGATTTATCTGTCA+TGG | 0.531144 | 4.3:-84706504 | MS.gene033977:CDS |
| ACGCTCTGAGAATGATGTCT+TGG | 0.531457 | 4.3:-84706804 | MS.gene033977:CDS |
| CAAATTCCAATATGTGGTGT+AGG | 0.537043 | 4.3:-84707207 | None:intergenic |
| TTATTAATCAGACAAGCCTT+GGG | 0.537783 | 4.3:+84702539 | None:intergenic |
| AGAGTGAGAATGAGACAAAG+TGG | 0.548397 | 4.3:-84706385 | MS.gene033977:CDS |
| ATGTGGTGTAGGCCTCCAAT+GGG | 0.549587 | 4.3:-84707196 | MS.gene033977:CDS |
| GTTAAGGATGGCTGAAGCAA+GGG | 0.552337 | 4.3:-84706450 | MS.gene033977:CDS |
| GAAAGATGAACCCAAATGGA+AGG | 0.553367 | 4.3:-84706711 | MS.gene033977:CDS |
| GTGGTATGAAATCCTCATCA+AGG | 0.556672 | 4.3:-84706366 | MS.gene033977:CDS |
| TACACAACATCTTCAAATCC+AGG | 0.559189 | 4.3:-84706635 | MS.gene033977:CDS |
| GGCTGAAGCAAGAGAAAGAG+AGG | 0.562193 | 4.3:-84706420 | MS.gene033977:CDS |
| TAGTAGTTGTATCCTTGATG+AGG | 0.564103 | 4.3:+84706354 | None:intergenic |
| AGAACAAAGATTTCTAGTAG+TGG | 0.567228 | 4.3:-84706662 | MS.gene033977:CDS |
| ACATCCAAGCATGCACATGA+AGG | 0.568482 | 4.3:+84706738 | None:intergenic |
| AGAAAGAGAGGCCAAAGCAA+GGG | 0.570183 | 4.3:-84706408 | MS.gene033977:CDS |
| TGTTAAGGATGGCTGAAGCA+AGG | 0.574606 | 4.3:-84706451 | MS.gene033977:CDS |
| ATTGGACGGACCACTGGTGA+TGG | 0.575271 | 4.3:+84706581 | None:intergenic |
| AATGGGTTCTAGCGGTGGTG+TGG | 0.575768 | 4.3:-84707179 | MS.gene033977:CDS |
| TGAGAATGATGTCTTGGCTG+AGG | 0.576801 | 4.3:-84706798 | MS.gene033977:CDS |
| AACAAAGATTTCTAGTAGTG+GGG | 0.581273 | 4.3:-84706660 | MS.gene033977:CDS |
| ACAAAGATTTCTAGTAGTGG+GGG | 0.585288 | 4.3:-84706659 | MS.gene033977:CDS |
| ATGTCTTGGCTGAGGCACAT+AGG | 0.590198 | 4.3:-84706790 | MS.gene033977:CDS |
| AAAGATGAACCCAAATGGAA+GGG | 0.591218 | 4.3:-84706710 | MS.gene033977:CDS |
| ATCATGGCTCAACATTTCGA+AGG | 0.593264 | 4.3:-84707017 | MS.gene033977:CDS |
| CCTCCAATGGGTTCTAGCGG+TGG | 0.596036 | 4.3:-84707184 | MS.gene033977:CDS |
| GGCTGAAGCAAGGGAAAAGG+AGG | 0.596279 | 4.3:-84706441 | MS.gene033977:CDS |
| GAGAAAGAGAGGCCAAAGCA+AGG | 0.597749 | 4.3:-84706409 | MS.gene033977:CDS |
| AAATGTTATCATGTTAAGGA+TGG | 0.603681 | 4.3:-84706462 | MS.gene033977:CDS |
| CCACCGCTAGAACCCATTGG+AGG | 0.604763 | 4.3:+84707184 | None:intergenic |
| ACACCACCGCTAGAACCCAT+TGG | 0.607694 | 4.3:+84707181 | None:intergenic |
| AGGCCTCCAATGGGTTCTAG+CGG | 0.662393 | 4.3:-84707187 | MS.gene033977:CDS |
| GTCACAATACCAACTACCCA+AGG | 0.666191 | 4.3:-84702555 | MS.gene033977:CDS |
| GGGTAGTTGGTATTGTGACG+AGG | 0.673392 | 4.3:+84702559 | None:intergenic |
| CAAAGATTTCTAGTAGTGGG+GGG | 0.694966 | 4.3:-84706658 | MS.gene033977:CDS |
| CTATGAACAGCCATCACCAG+TGG | 0.697983 | 4.3:-84706591 | MS.gene033977:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCGTAAATATTAAAAATA+AGG | + | chr4.3:84705606-84705625 | None:intergenic | 10.0% |
| !! | ATTAAAAAATTACAAATTTG+TGG | - | chr4.3:84705684-84705703 | MS.gene033977:intron | 10.0% |
| !! | TTAAAAAATTACAAATTTGT+GGG | - | chr4.3:84705685-84705704 | MS.gene033977:intron | 10.0% |
| !!! | ATATAGTTTTATTTTCATAA+CGG | + | chr4.3:84703996-84704015 | None:intergenic | 10.0% |
| !!! | CACAATTTTTTTTTTTTTTT+AGG | - | chr4.3:84707148-84707167 | MS.gene033977:CDS | 10.0% |
| !!! | TAATAAAAAGTTTGTATTTT+TGG | + | chr4.3:84705918-84705937 | None:intergenic | 10.0% |
| !! | TAAAAAATTACAAATTTGTG+GGG | - | chr4.3:84705686-84705705 | MS.gene033977:intron | 15.0% |
| !!! | TAAGAAAAAGTTTTTATGTT+TGG | + | chr4.3:84706196-84706215 | None:intergenic | 15.0% |
| !!! | TTATATATTGACTTACAATA+TGG | + | chr4.3:84706134-84706153 | None:intergenic | 15.0% |
| !!! | TTATTTTATGTTTCCTAAAT+TGG | + | chr4.3:84706165-84706184 | None:intergenic | 15.0% |
| !! | AATACTACTCCTTATAATAT+GGG | - | chr4.3:84704940-84704959 | MS.gene033977:intron | 20.0% |
| !! | AATTGAATCAAAATTAAGTG+AGG | - | chr4.3:84705661-84705680 | MS.gene033977:intron | 20.0% |
| !! | ATAACTACTAGTTAAAAACA+AGG | + | chr4.3:84706051-84706070 | None:intergenic | 20.0% |
| !! | ATAGAAATGTTATCATGTTA+AGG | - | chr4.3:84703272-84703291 | MS.gene033977:intron | 20.0% |
| !! | TAAAATGTTGAAAAACACAT+TGG | + | chr4.3:84704887-84704906 | None:intergenic | 20.0% |
| !! | TAACTACTAGTTAAAAACAA+GGG | + | chr4.3:84706050-84706069 | None:intergenic | 20.0% |
| !!! | TATAACGGCTAATTTTTTAA+CGG | + | chr4.3:84703967-84703986 | None:intergenic | 20.0% |
| ! | AAAAAAGAAGGGTGATAAAT+CGG | - | chr4.3:84704257-84704276 | MS.gene033977:intron | 25.0% |
| ! | AAATGTTATCATGTTAAGGA+TGG | - | chr4.3:84703276-84703295 | MS.gene033977:intron | 25.0% |
| ! | AATTGATCATCTGTGTATAT+CGG | + | chr4.3:84704334-84704353 | None:intergenic | 25.0% |
| ! | AGATAATACCCCATATTATA+AGG | + | chr4.3:84704952-84704971 | None:intergenic | 25.0% |
| ! | ATACTACTCCTTATAATATG+GGG | - | chr4.3:84704941-84704960 | MS.gene033977:intron | 25.0% |
| ! | ATTATAAGGAGTAGTATTCA+CGG | + | chr4.3:84704938-84704957 | None:intergenic | 25.0% |
| ! | GAATACTACTCCTTATAATA+TGG | - | chr4.3:84704939-84704958 | MS.gene033977:intron | 25.0% |
| ! | TATAAGACAAACACCAATTT+AGG | - | chr4.3:84706149-84706168 | MS.gene033977:intron | 25.0% |
| ! | TATCTCAACAAATATCTACT+TGG | - | chr4.3:84706722-84706741 | MS.gene033977:CDS | 25.0% |
| ! | TGATACAATTAATACGTGAA+GGG | - | chr4.3:84704203-84704222 | MS.gene033977:intron | 25.0% |
| ! | TTATCTCAACAAATATCTTG+AGG | - | chr4.3:84706807-84706826 | MS.gene033977:CDS | 25.0% |
| ! | TTGAGTGTTATATTTGTATC+AGG | + | chr4.3:84707033-84707052 | None:intergenic | 25.0% |
| !! | ATGTATGAGTGTTTTCTTTT+TGG | + | chr4.3:84706908-84706927 | None:intergenic | 25.0% |
| !! | ATGTATGTTTCTAAAAAGTG+AGG | + | chr4.3:84705300-84705319 | None:intergenic | 25.0% |
| !! | TGTATGAGTGTTTTCTTTTT+GGG | + | chr4.3:84706907-84706926 | None:intergenic | 25.0% |
| !!! | ACGAGTTTTAGTTTTTTTCT+TGG | + | chr4.3:84702663-84702682 | None:intergenic | 25.0% |
| !!! | AGTTTTTTATTTGAGTTGAG+AGG | + | chr4.3:84707009-84707028 | None:intergenic | 25.0% |
| !!! | GTGTTTTTCAACATTTTAGA+AGG | - | chr4.3:84704889-84704908 | MS.gene033977:intron | 25.0% |
| !!! | TAATGTTGATTTATCTGTCA+TGG | - | chr4.3:84703234-84703253 | MS.gene033977:intron | 25.0% |
| !!! | TATAACGACTAGTTTTTTAC+TGG | + | chr4.3:84703820-84703839 | None:intergenic | 25.0% |
| !!! | TATAACGGCTAGTTTTTTAA+CGG | + | chr4.3:84703747-84703766 | None:intergenic | 25.0% |
| !!! | TCCACTTTTGTTTTGATTAA+GGG | + | chr4.3:84702915-84702934 | None:intergenic | 25.0% |
| !!! | TTGCTTAAGTTACTTTTTGT+GGG | + | chr4.3:84705802-84705821 | None:intergenic | 25.0% |
| !!! | TTTTACCGACTAGTTTATAA+CGG | + | chr4.3:84703762-84703781 | None:intergenic | 25.0% |
| !!! | TTTTACTGGCTAGTTTATAA+CGG | + | chr4.3:84703806-84703825 | None:intergenic | 25.0% |
| AATCTCAACAGATACCTATT+AGG | - | chr4.3:84706636-84706655 | MS.gene033977:CDS | 30.0% | |
| AATGATAGATGAATGCTTTG+AGG | - | chr4.3:84704162-84704181 | MS.gene033977:intron | 30.0% | |
| ACACACTTCTATTTCAATCA+TGG | - | chr4.3:84702705-84702724 | MS.gene033977:intron | 30.0% | |
| AGAATCAGTAAGAAAAGATG+TGG | - | chr4.3:84705062-84705081 | MS.gene033977:intron | 30.0% | |
| AGCCTTTCAAAAAAACTAGT+CGG | - | chr4.3:84703710-84703729 | MS.gene033977:intron | 30.0% | |
| ATGCCAAATCCATAAATCAT+AGG | + | chr4.3:84704812-84704831 | None:intergenic | 30.0% | |
| ATTGTTGAAGATGAGAGAAT+TGG | + | chr4.3:84704076-84704095 | None:intergenic | 30.0% | |
| CATCCTATGATTTATGGATT+TGG | - | chr4.3:84704806-84704825 | MS.gene033977:intron | 30.0% | |
| GAAAATATTAAGCTCGATGA+AGG | - | chr4.3:84702626-84702645 | MS.gene033977:intron | 30.0% | |
| GACACATGTTAGTGATTATA+TGG | + | chr4.3:84706005-84706024 | None:intergenic | 30.0% | |
| GATTGAACAAATGAGAGAAT+TGG | + | chr4.3:84704042-84704061 | None:intergenic | 30.0% | |
| GTGATACAATTAATACGTGA+AGG | - | chr4.3:84704202-84704221 | MS.gene033977:intron | 30.0% | |
| GTTTAATTGTTATGCACTGA+TGG | + | chr4.3:84706871-84706890 | None:intergenic | 30.0% | |
| TAAGGAATTAGGAAATGAGA+AGG | - | chr4.3:84706481-84706500 | MS.gene033977:CDS | 30.0% | |
| TAGGAAATGAGAAGGAAAAA+AGG | - | chr4.3:84706489-84706508 | MS.gene033977:CDS | 30.0% | |
| TATTGAAAGATGAACCCAAA+TGG | - | chr4.3:84703023-84703042 | MS.gene033977:intron | 30.0% | |
| TCAACTAAATCACTCCTAAT+AGG | + | chr4.3:84706653-84706672 | None:intergenic | 30.0% | |
| TCATAGTCTGAACATTCAAT+AGG | + | chr4.3:84703133-84703152 | None:intergenic | 30.0% | |
| TTCATATATCATCCGCATAA+TGG | - | chr4.3:84704105-84704124 | MS.gene033977:intron | 30.0% | |
| ! | ACCAAAAATCAGATGGTTTT+TGG | - | chr4.3:84702762-84702781 | MS.gene033977:intron | 30.0% |
| ! | ATCATGAATTTTGTTGCAGT+CGG | - | chr4.3:84703428-84703447 | MS.gene033977:intron | 30.0% |
| ! | CAAAGCATTCATCTATCATT+TGG | + | chr4.3:84704162-84704181 | None:intergenic | 30.0% |
| ! | CTCAATCAATTTTACTCCAA+TGG | + | chr4.3:84705739-84705758 | None:intergenic | 30.0% |
| ! | TCCAAAAACCATCTGATTTT+TGG | + | chr4.3:84702766-84702785 | None:intergenic | 30.0% |
| ! | TTCCATTGATTGTATGCATT+GGG | - | chr4.3:84704699-84704718 | MS.gene033977:intron | 30.0% |
| ! | TTTCTAAAAAGTGAGGATGA+GGG | + | chr4.3:84705293-84705312 | None:intergenic | 30.0% |
| !! | AACAAAGATTTCTAGTAGTG+GGG | - | chr4.3:84703078-84703097 | MS.gene033977:intron | 30.0% |
| !! | AGAACAAAGATTTCTAGTAG+TGG | - | chr4.3:84703076-84703095 | MS.gene033977:intron | 30.0% |
| !! | CATGTTTTAAACTTCTCATG+TGG | + | chr4.3:84706586-84706605 | None:intergenic | 30.0% |
| !! | GAACAAAGATTTCTAGTAGT+GGG | - | chr4.3:84703077-84703096 | MS.gene033977:intron | 30.0% |
| !! | TCATAACGGCTAGTTTATAA+CGG | + | chr4.3:84703982-84704001 | None:intergenic | 30.0% |
| !! | TTATTTGAGTTGAGAGGAAT+CGG | + | chr4.3:84707003-84707022 | None:intergenic | 30.0% |
| !!! | ACTTTTGTTTTGATTAAGGG+CGG | + | chr4.3:84702912-84702931 | None:intergenic | 30.0% |
| !!! | AGGAAAACGTTTTGAAGATA+AGG | - | chr4.3:84706463-84706482 | MS.gene033977:CDS | 30.0% |
| !!! | ATTTGACCTGTTTCCTTTTT+TGG | + | chr4.3:84702830-84702849 | None:intergenic | 30.0% |
| !!! | CGTTTTGAAGATAAGGAATT+AGG | - | chr4.3:84706470-84706489 | MS.gene033977:CDS | 30.0% |
| !!! | GTCCACTTTTGTTTTGATTA+AGG | + | chr4.3:84702916-84702935 | None:intergenic | 30.0% |
| !!! | GTTGCTTAAGTTACTTTTTG+TGG | + | chr4.3:84705803-84705822 | None:intergenic | 30.0% |
| !!! | TACCGACTAGTTTTTTTGAA+AGG | + | chr4.3:84703715-84703734 | None:intergenic | 30.0% |
| !!! | TATAACGGCTAGTTTTTTAC+CGG | + | chr4.3:84703922-84703941 | None:intergenic | 30.0% |
| !!! | TTAACGGCTAGTTTTTTTAC+CGG | + | chr4.3:84703951-84703970 | None:intergenic | 30.0% |
| !!! | TTTACCGGCTAGTTTTTTAA+CGG | + | chr4.3:84703907-84703926 | None:intergenic | 30.0% |
| !!! | TTTTAACGGCTAGTTTTTAC+CGG | + | chr4.3:84703849-84703868 | None:intergenic | 30.0% |
| !!! | TTTTACCGGCTAGTTTATAA+CGG | + | chr4.3:84703835-84703854 | None:intergenic | 30.0% |
| AAACCCAAAGAATGTTTGGA+TGG | + | chr4.3:84706318-84706337 | None:intergenic | 35.0% | |
| AAAGATGAACCCAAATGGAA+GGG | - | chr4.3:84703028-84703047 | MS.gene033977:intron | 35.0% | |
| AACCCAAAGAATGTTTGGAT+GGG | + | chr4.3:84706317-84706336 | None:intergenic | 35.0% | |
| AAGCAAACCCAAAGAATGTT+TGG | + | chr4.3:84706322-84706341 | None:intergenic | 35.0% | |
| AATATCTTGAGGCGTGATTT+AGG | - | chr4.3:84706818-84706837 | MS.gene033977:CDS | 35.0% | |
| AATTGGTGAAAATACTGCAG+TGG | - | chr4.3:84704546-84704565 | MS.gene033977:intron | 35.0% | |
| AATTGTATCACTTCTTCTGC+AGG | + | chr4.3:84704193-84704212 | None:intergenic | 35.0% | |
| ACTAGCCGTTATAAACTAGT+CGG | - | chr4.3:84703754-84703773 | MS.gene033977:intron | 35.0% | |
| ACTAGTCGTTATAAACTAGC+CGG | - | chr4.3:84703827-84703846 | MS.gene033977:intron | 35.0% | |
| AGCCAACAAACTTCTGAATA+CGG | + | chr4.3:84702880-84702899 | None:intergenic | 35.0% | |
| AGTAATCGTCATGATTTCCA+AGG | + | chr4.3:84704408-84704427 | None:intergenic | 35.0% | |
| ATGACGATTACTTCCAAACA+AGG | - | chr4.3:84704416-84704435 | MS.gene033977:intron | 35.0% | |
| ATTGATGCAGTTCATAGAGT+AGG | - | chr4.3:84704439-84704458 | MS.gene033977:intron | 35.0% | |
| ATTGTATCACTTCTTCTGCA+GGG | + | chr4.3:84704192-84704211 | None:intergenic | 35.0% | |
| ATTTCGAAGGACTCAATTGT+TGG | - | chr4.3:84702734-84702753 | MS.gene033977:intron | 35.0% | |
| CAACTACCAAAAAAGGAAAC+AGG | - | chr4.3:84702821-84702840 | MS.gene033977:intron | 35.0% | |
| CTAACCGTTAAAAAACTAGC+CGG | - | chr4.3:84703740-84703759 | MS.gene033977:intron | 35.0% | |
| GAAACCAACAATTATGCTTG+AGG | - | chr4.3:84704777-84704796 | MS.gene033977:intron | 35.0% | |
| GATTACGATCATGTCGATAA+TGG | - | chr4.3:84705240-84705259 | MS.gene033977:intron | 35.0% | |
| GCCCTTAATCAAAACAAAAG+TGG | - | chr4.3:84702911-84702930 | MS.gene033977:intron | 35.0% | |
| GTAATCGTCATGATTTCCAA+GGG | + | chr4.3:84704407-84704426 | None:intergenic | 35.0% | |
| GTTCCATATTGTATCAGAGT+CGG | + | chr4.3:84704140-84704159 | None:intergenic | 35.0% | |
| TACACAACATCTTCAAATCC+AGG | - | chr4.3:84703103-84703122 | MS.gene033977:intron | 35.0% | |
| TAGATGCAATGTGGCAATTT+GGG | - | chr4.3:84705776-84705795 | MS.gene033977:intron | 35.0% | |
| TAGTAGTTGTATCCTTGATG+AGG | + | chr4.3:84703387-84703406 | None:intergenic | 35.0% | |
| TCATGCTAACATGTCTTGTA+AGG | + | chr4.3:84706027-84706046 | None:intergenic | 35.0% | |
| TCGCAATTCTCTACTCAAAT+TGG | - | chr4.3:84702599-84702618 | MS.gene033977:intron | 35.0% | |
| TGCTTATTGTTTCACGTTGA+AGG | - | chr4.3:84703579-84703598 | MS.gene033977:intron | 35.0% | |
| TGTTTAGAGAGGTTTGTAAC+AGG | - | chr4.3:84704571-84704590 | MS.gene033977:intron | 35.0% | |
| TTAATGTCATTGTTTGAGCC+CGG | + | chr4.3:84704850-84704869 | None:intergenic | 35.0% | |
| TTAGATGCAATGTGGCAATT+TGG | - | chr4.3:84705775-84705794 | MS.gene033977:intron | 35.0% | |
| TTCCCAATGCATACAATCAA+TGG | + | chr4.3:84704704-84704723 | None:intergenic | 35.0% | |
| TTGATTGTATGCATTGGGAA+TGG | - | chr4.3:84704704-84704723 | MS.gene033977:intron | 35.0% | |
| TTGCTTATTGTAGTCACCAT+TGG | - | chr4.3:84705720-84705739 | MS.gene033977:intron | 35.0% | |
| TTTGACAAATGTAGCCCATT+CGG | + | chr4.3:84704992-84705011 | None:intergenic | 35.0% | |
| ! | AATTGTCTCTTTTCTCCTTG+AGG | + | chr4.3:84705027-84705046 | None:intergenic | 35.0% |
| ! | AATTTTGTCGAGGAGATCAT+GGG | - | chr4.3:84704755-84704774 | MS.gene033977:intron | 35.0% |
| ! | AATTTTGTTGCAGTCGGATT+AGG | - | chr4.3:84703434-84703453 | MS.gene033977:intron | 35.0% |
| ! | ACTGAACGCCTTCTAAAAAT+AGG | - | chr4.3:84704646-84704665 | MS.gene033977:intron | 35.0% |
| ! | CTGAACGCCTTCTAAAAATA+GGG | - | chr4.3:84704647-84704666 | MS.gene033977:intron | 35.0% |
| ! | GTTCCATTGATTGTATGCAT+TGG | - | chr4.3:84704698-84704717 | MS.gene033977:intron | 35.0% |
| ! | GTTTCTAAAAAGTGAGGATG+AGG | + | chr4.3:84705294-84705313 | None:intergenic | 35.0% |
| ! | TGAACGCCTTCTAAAAATAG+GGG | - | chr4.3:84704648-84704667 | MS.gene033977:intron | 35.0% |
| !! | ACAAAGATTTCTAGTAGTGG+GGG | - | chr4.3:84703079-84703098 | MS.gene033977:intron | 35.0% |
| !! | TCTTACTGATTCTTGTCGTT+TGG | + | chr4.3:84705055-84705074 | None:intergenic | 35.0% |
| !!! | TGGATTTGGCATGCTTTTTT+TGG | - | chr4.3:84704820-84704839 | MS.gene033977:intron | 35.0% |
| AAAGATGTGGAACGAGCATT+TGG | - | chr4.3:84705075-84705094 | MS.gene033977:intron | 40.0% | |
| AATTCCTTCATGTGCATGCT+TGG | - | chr4.3:84702996-84703015 | MS.gene033977:intron | 40.0% | |
| AATTGCATCTCCCTTCCATT+TGG | + | chr4.3:84703041-84703060 | None:intergenic | 40.0% | |
| ACCAACAATTATGCTTGAGG+CGG | - | chr4.3:84704780-84704799 | MS.gene033977:intron | 40.0% | |
| ACCAAGATAAGTTCTCCCAT+TGG | - | chr4.3:84705821-84705840 | MS.gene033977:intron | 40.0% | |
| ACTAGCCGTTATAAACTAGC+CGG | - | chr4.3:84703798-84703817 | MS.gene033977:intron | 40.0% | |
| AGAGTGAGAATGAGACAAAG+TGG | - | chr4.3:84703353-84703372 | MS.gene033977:intron | 40.0% | |
| ATAAATCGGAGTCGTGAAGA+AGG | - | chr4.3:84704271-84704290 | MS.gene033977:intron | 40.0% | |
| ATATGCCAACAAACGAAGAG+CGG | + | chr4.3:84704491-84704510 | None:intergenic | 40.0% | |
| ATCATGGCTCAACATTTCGA+AGG | - | chr4.3:84702721-84702740 | MS.gene033977:intron | 40.0% | |
| ATCGGAAAAGGAAAGTTTGG+AGG | + | chr4.3:84706985-84707004 | None:intergenic | 40.0% | |
| ATTCACGGTGAACTGTACAT+TGG | + | chr4.3:84704923-84704942 | None:intergenic | 40.0% | |
| ATTGCATCTCCCTTCCATTT+GGG | + | chr4.3:84703040-84703059 | None:intergenic | 40.0% | |
| CAAAGAATGTTTGGATGGGA+CGG | + | chr4.3:84706313-84706332 | None:intergenic | 40.0% | |
| CCAAACAAAATCGTAGAGGA+CGG | + | chr4.3:84706428-84706447 | None:intergenic | 40.0% | |
| CCAAATATGCTCCACCAAAT+CGG | + | chr4.3:84705373-84705392 | None:intergenic | 40.0% | |
| CCATTTGATACTTCAGCTGA+TGG | + | chr4.3:84705270-84705289 | None:intergenic | 40.0% | |
| CGGTTGCATCCTATGATTTA+TGG | - | chr4.3:84704800-84704819 | MS.gene033977:intron | 40.0% | |
| CGTTCAGTGTCTTCATTGTT+AGG | + | chr4.3:84704634-84704653 | None:intergenic | 40.0% | |
| GAAAGATGAACCCAAATGGA+AGG | - | chr4.3:84703027-84703046 | MS.gene033977:intron | 40.0% | |
| GAACATTCAATAGGTGTTCC+TGG | + | chr4.3:84703124-84703143 | None:intergenic | 40.0% | |
| GAACTGCATCAATCCTTGTT+TGG | + | chr4.3:84704432-84704451 | None:intergenic | 40.0% | |
| GAGATTGCTTAGATGCAATG+TGG | - | chr4.3:84705767-84705786 | MS.gene033977:intron | 40.0% | |
| GGAATCGGAAAAGGAAAGTT+TGG | + | chr4.3:84706988-84707007 | None:intergenic | 40.0% | |
| GGAATGGAAAAATTGTCCAG+TGG | - | chr4.3:84704720-84704739 | MS.gene033977:intron | 40.0% | |
| GTCCCATCCAAACATTCTTT+GGG | - | chr4.3:84706312-84706331 | MS.gene033977:CDS | 40.0% | |
| GTGGTATGAAATCCTCATCA+AGG | - | chr4.3:84703372-84703391 | MS.gene033977:intron | 40.0% | |
| TAAGTGTCAGTCGACATACT+AGG | - | chr4.3:84706370-84706389 | MS.gene033977:CDS | 40.0% | |
| TACGCGCAGACAAAAAAGAA+GGG | - | chr4.3:84704246-84704265 | MS.gene033977:intron | 40.0% | |
| TCAATGGAACCTAACATACC+TGG | + | chr4.3:84704688-84704707 | None:intergenic | 40.0% | |
| TCCAATGGGAGAACTTATCT+TGG | + | chr4.3:84705825-84705844 | None:intergenic | 40.0% | |
| TCGGAAAAGGAAAGTTTGGA+GGG | + | chr4.3:84706984-84707003 | None:intergenic | 40.0% | |
| TCTGAATACGGCCATTCAAA+CGG | + | chr4.3:84702868-84702887 | None:intergenic | 40.0% | |
| TGATGGCATTTATCCCGAAT+GGG | - | chr4.3:84704975-84704994 | MS.gene033977:intron | 40.0% | |
| TGGGACAAAAAGCAGCAAAA+AGG | - | chr4.3:84703179-84703198 | MS.gene033977:intron | 40.0% | |
| TTCACGGTGAACTGTACATT+GGG | + | chr4.3:84704922-84704941 | None:intergenic | 40.0% | |
| TTGACAAATGTAGCCCATTC+GGG | + | chr4.3:84704991-84705010 | None:intergenic | 40.0% | |
| TTTGTTTGGGAGGTTTGAAC+AGG | - | chr4.3:84706439-84706458 | MS.gene033977:CDS | 40.0% | |
| ! | ACAGGAGTGCACACAATATT+TGG | - | chr4.3:84704589-84704608 | MS.gene033977:intron | 40.0% |
| ! | ATGGGGTATTATCTAGCTGA+TGG | - | chr4.3:84704958-84704977 | MS.gene033977:intron | 40.0% |
| ! | ATTGTATCAGAGTCGGTGTT+TGG | + | chr4.3:84704133-84704152 | None:intergenic | 40.0% |
| ! | CAATTTTGTCGAGGAGATCA+TGG | - | chr4.3:84704754-84704773 | MS.gene033977:intron | 40.0% |
| ! | CAGGAGTGCACACAATATTT+GGG | - | chr4.3:84704590-84704609 | MS.gene033977:intron | 40.0% |
| ! | CCATCAGCTGAAGTATCAAA+TGG | - | chr4.3:84705267-84705286 | MS.gene033977:intron | 40.0% |
| ! | CTCTTCCATTGTTTTCAACG+TGG | + | chr4.3:84706939-84706958 | None:intergenic | 40.0% |
| ! | GAGCATATTTGGGAACGTTT+TGG | - | chr4.3:84705381-84705400 | MS.gene033977:intron | 40.0% |
| ! | TGGAAAGGACAATTTTGTCG+AGG | - | chr4.3:84704745-84704764 | MS.gene033977:intron | 40.0% |
| !! | ACACCGACTCTGATACAATA+TGG | - | chr4.3:84704134-84704153 | MS.gene033977:intron | 40.0% |
| !! | CAAAGATTTCTAGTAGTGGG+GGG | - | chr4.3:84703080-84703099 | MS.gene033977:intron | 40.0% |
| !! | CGATTTGGTGGAGCATATTT+GGG | - | chr4.3:84705371-84705390 | MS.gene033977:intron | 40.0% |
| !! | CGTCCTCTACGATTTTGTTT+GGG | - | chr4.3:84706426-84706445 | MS.gene033977:CDS | 40.0% |
| !! | TCACTAAGAGCATCTCCAAT+GGG | + | chr4.3:84705839-84705858 | None:intergenic | 40.0% |
| !! | TCTTTTCTCCTTGAGGCATT+GGG | + | chr4.3:84705020-84705039 | None:intergenic | 40.0% |
| !!! | CATGCTTTTTTTGGTACTCC+GGG | - | chr4.3:84704829-84704848 | MS.gene033977:intron | 40.0% |
| !!! | CCTTTTTTGGTAGTTGATCG+CGG | + | chr4.3:84702817-84702836 | None:intergenic | 40.0% |
| !!! | GCATGCTTTTTTTGGTACTC+CGG | - | chr4.3:84704828-84704847 | MS.gene033977:intron | 40.0% |
| !!! | TTTGCTGCTTTTTGTCCCAT+TGG | + | chr4.3:84703178-84703197 | None:intergenic | 40.0% |
| AAAACCATCCCAATGCCTCA+AGG | - | chr4.3:84705009-84705028 | MS.gene033977:intron | 45.0% | |
| AAAAGGAAAGTTTGGAGGGG+AGG | + | chr4.3:84706980-84706999 | None:intergenic | 45.0% | |
| AATTGTCCTTTCCAAGCCAC+TGG | + | chr4.3:84704739-84704758 | None:intergenic | 45.0% | |
| ACATCCAAGCATGCACATGA+AGG | + | chr4.3:84703003-84703022 | None:intergenic | 45.0% | |
| ACCGCCTCAAGCATAATTGT+TGG | + | chr4.3:84704784-84704803 | None:intergenic | 45.0% | |
| AGAAAGAGAGGCCAAAGCAA+GGG | - | chr4.3:84703330-84703349 | MS.gene033977:intron | 45.0% | |
| ATTCTCACTCTCCCTTGCTT+TGG | + | chr4.3:84703344-84703363 | None:intergenic | 45.0% | |
| CAATTGCTACATACACCCTC+CGG | + | chr4.3:84705862-84705881 | None:intergenic | 45.0% | |
| CAGATGATCAATTTCGCCGA+AGG | - | chr4.3:84704341-84704360 | MS.gene033977:intron | 45.0% | |
| CCACTCCACGTTGAAAACAA+TGG | - | chr4.3:84706931-84706950 | MS.gene033977:CDS | 45.0% | |
| CCGCGATCAACTACCAAAAA+AGG | - | chr4.3:84702814-84702833 | MS.gene033977:intron | 45.0% | |
| CCTCCCAAACAAAATCGTAG+AGG | + | chr4.3:84706432-84706451 | None:intergenic | 45.0% | |
| CGGAAAAGGAAAGTTTGGAG+GGG | + | chr4.3:84706983-84707002 | None:intergenic | 45.0% | |
| CGGTGTTTGGATCCATTATG+CGG | + | chr4.3:84704120-84704139 | None:intergenic | 45.0% | |
| CGTCCCATCCAAACATTCTT+TGG | - | chr4.3:84706311-84706330 | MS.gene033977:CDS | 45.0% | |
| CGTGGATTTCCAGGTATGTT+AGG | - | chr4.3:84704676-84704695 | MS.gene033977:intron | 45.0% | |
| CTACGCGCAGACAAAAAAGA+AGG | - | chr4.3:84704245-84704264 | MS.gene033977:intron | 45.0% | |
| CTGATGGCATTTATCCCGAA+TGG | - | chr4.3:84704974-84704993 | MS.gene033977:intron | 45.0% | |
| CTTCATTGTTAGGCCTTCTC+AGG | + | chr4.3:84704624-84704643 | None:intergenic | 45.0% | |
| CTTCGAATTGTTGAAGCCCT+TGG | - | chr4.3:84704388-84704407 | MS.gene033977:intron | 45.0% | |
| GAATTGCGACATGTCGTTAC+CGG | + | chr4.3:84702588-84702607 | None:intergenic | 45.0% | |
| GAGTTGAGAGGAATCGGAAA+AGG | + | chr4.3:84706997-84707016 | None:intergenic | 45.0% | |
| GATGAACGTGACACGTATGA+TGG | - | chr4.3:84705210-84705229 | MS.gene033977:intron | 45.0% | |
| GCAGCAAAAAGGAAGAGCAA+AGG | - | chr4.3:84703190-84703209 | MS.gene033977:intron | 45.0% | |
| GCTCGATATCACCGTTTGAA+TGG | - | chr4.3:84702854-84702873 | MS.gene033977:intron | 45.0% | |
| GGAAAAATTGTCCAGTGGCT+TGG | - | chr4.3:84704725-84704744 | MS.gene033977:intron | 45.0% | |
| GGAGTCGACCAAAAATCAGA+TGG | - | chr4.3:84702755-84702774 | MS.gene033977:intron | 45.0% | |
| GGCCGTATTCAGAAGTTTGT+TGG | - | chr4.3:84702875-84702894 | MS.gene033977:intron | 45.0% | |
| GTCACAATACCAACTACCCA+AGG | - | chr4.3:84707183-84707202 | MS.gene033977:CDS | 45.0% | |
| GTGGACGACTATGTTCGAAT+TGG | - | chr4.3:84704529-84704548 | MS.gene033977:intron | 45.0% | |
| GTTAAGGATGGCTGAAGCAA+GGG | - | chr4.3:84703288-84703307 | MS.gene033977:intron | 45.0% | |
| TAGTCGTCCACATTATCAGC+AGG | + | chr4.3:84704520-84704539 | None:intergenic | 45.0% | |
| TCGTCAACTTCAAGCCGATT+TGG | - | chr4.3:84705356-84705375 | MS.gene033977:intron | 45.0% | |
| TGAGAATGATGTCTTGGCTG+AGG | - | chr4.3:84702940-84702959 | MS.gene033977:intron | 45.0% | |
| TGTTAAGGATGGCTGAAGCA+AGG | - | chr4.3:84703287-84703306 | MS.gene033977:intron | 45.0% | |
| TTCATGTGCCAAGAACGTGA+TGG | + | chr4.3:84705135-84705154 | None:intergenic | 45.0% | |
| TTGGAGATGCTCTTAGTGAC+CGG | - | chr4.3:84705840-84705859 | MS.gene033977:intron | 45.0% | |
| TTTGGGAGGTTTGAACAGGA+AGG | - | chr4.3:84706443-84706462 | MS.gene033977:CDS | 45.0% | |
| ! | AATTGTCCAGTGGCTTGGAA+AGG | - | chr4.3:84704730-84704749 | MS.gene033977:intron | 45.0% |
| ! | ACGCCTTCTAAAAATAGGGG+AGG | - | chr4.3:84704651-84704670 | MS.gene033977:intron | 45.0% |
| ! | AGTCGGATTAGGCAGAAGTT+AGG | - | chr4.3:84703445-84703464 | MS.gene033977:intron | 45.0% |
| ! | CCATTGTTTTCAACGTGGAG+TGG | + | chr4.3:84706934-84706953 | None:intergenic | 45.0% |
| ! | CCGTCCTCTACGATTTTGTT+TGG | - | chr4.3:84706425-84706444 | MS.gene033977:CDS | 45.0% |
| ! | CTCTTTTCTCCTTGAGGCAT+TGG | + | chr4.3:84705021-84705040 | None:intergenic | 45.0% |
| ! | GCTCTTCGTTTGTTGGCATA+TGG | - | chr4.3:84704490-84704509 | MS.gene033977:intron | 45.0% |
| ! | TCTCGATTCGCAATTGTACG+CGG | - | chr4.3:84705108-84705127 | MS.gene033977:intron | 45.0% |
| ! | TGGAGTTCCTGCTGATAATG+TGG | - | chr4.3:84704510-84704529 | MS.gene033977:intron | 45.0% |
| !! | ACGCTCTGAGAATGATGTCT+TGG | - | chr4.3:84702934-84702953 | MS.gene033977:intron | 45.0% |
| !! | CCGATTTGGTGGAGCATATT+TGG | - | chr4.3:84705370-84705389 | MS.gene033977:intron | 45.0% |
| !! | CCTCTACGATTTTGTTTGGG+AGG | - | chr4.3:84706429-84706448 | MS.gene033977:CDS | 45.0% |
| !! | GTCACTAAGAGCATCTCCAA+TGG | + | chr4.3:84705840-84705859 | None:intergenic | 45.0% |
| !! | TCAACTTCAAGCCGATTTGG+TGG | - | chr4.3:84705359-84705378 | MS.gene033977:intron | 45.0% |
| !!! | CTGCTTTTTGTCCCATTGGA+CGG | + | chr4.3:84703174-84703193 | None:intergenic | 45.0% |
| !!! | GTGCCTCCCCTATTTTTAGA+AGG | + | chr4.3:84704657-84704676 | None:intergenic | 45.0% |
| !!! | AATTCAATTATTTTATTAAT+AGG | + | chr4.3:84705633-84705652 | None:intergenic | 5.0% |
| !!! | ACAATTTTTTTTTTTTTTTA+GGG | - | chr4.3:84707149-84707168 | MS.gene033977:CDS | 5.0% |
| AGATGCTCTTAGTGACCGGA+GGG | - | chr4.3:84705844-84705863 | MS.gene033977:intron | 50.0% | |
| ATGTCTTGGCTGAGGCACAT+AGG | - | chr4.3:84702948-84702967 | MS.gene033977:intron | 50.0% | |
| ATGTGGTGTAGGCCTCCAAT+GGG | - | chr4.3:84702542-84702561 | MS.gene033977:CDS | 50.0% | |
| CAAAATCGTAGAGGACGGTG+AGG | + | chr4.3:84706423-84706442 | None:intergenic | 50.0% | |
| CTATGAACAGCCATCACCAG+TGG | - | chr4.3:84703147-84703166 | MS.gene033977:intron | 50.0% | |
| GAAAGTTTGGAGGGGAGGAA+GGG | + | chr4.3:84706975-84706994 | None:intergenic | 50.0% | |
| GAGAAAGAGAGGCCAAAGCA+AGG | - | chr4.3:84703329-84703348 | MS.gene033977:intron | 50.0% | |
| GATGGCTGAAGCAAGGGAAA+AGG | - | chr4.3:84703294-84703313 | MS.gene033977:intron | 50.0% | |
| GCCTTCGCATTCTGAACCTT+CGG | + | chr4.3:84704360-84704379 | None:intergenic | 50.0% | |
| GGCTGAAGCAAGAGAAAGAG+AGG | - | chr4.3:84703318-84703337 | MS.gene033977:intron | 50.0% | |
| TCAGACAAGCCTTGGGTAGT+TGG | + | chr4.3:84707195-84707214 | None:intergenic | 50.0% | |
| TGCACTTCTGCAACGGTGAA+AGG | + | chr4.3:84704465-84704484 | None:intergenic | 50.0% | |
| ! | CTAAAAATAGGGGAGGCACG+TGG | - | chr4.3:84704658-84704677 | MS.gene033977:intron | 50.0% |
| ! | CTGCAGTGGAGTGTTTAGAG+AGG | - | chr4.3:84704560-84704579 | MS.gene033977:intron | 50.0% |
| ! | GGGTAGTTGGTATTGTGACG+AGG | + | chr4.3:84707182-84707201 | None:intergenic | 50.0% |
| ! | TTAGGCCTTCTCAGGTACTG+AGG | + | chr4.3:84704616-84704635 | None:intergenic | 50.0% |
| !! | TTCTCCTTGAGGCATTGGGA+TGG | + | chr4.3:84705016-84705035 | None:intergenic | 50.0% |
| ACACCACCGCTAGAACCCAT+TGG | + | chr4.3:84702560-84702579 | None:intergenic | 55.0% | |
| AGGACGGTGAGGAAGTGGAA+TGG | + | chr4.3:84706412-84706431 | None:intergenic | 55.0% | |
| ATCACCAGTGGTCCGTCCAA+TGG | - | chr4.3:84703159-84703178 | MS.gene033977:intron | 55.0% | |
| ATTGGACGGACCACTGGTGA+TGG | + | chr4.3:84703160-84703179 | None:intergenic | 55.0% | |
| CACTGCCGCTCTTCGTTTGT+TGG | - | chr4.3:84704483-84704502 | MS.gene033977:intron | 55.0% | |
| GACGGTGAGGAAGTGGAATG+GGG | + | chr4.3:84706410-84706429 | None:intergenic | 55.0% | |
| GAGATGCTCTTAGTGACCGG+AGG | - | chr4.3:84705843-84705862 | MS.gene033977:intron | 55.0% | |
| GCCGAAGGTTCAGAATGCGA+AGG | - | chr4.3:84704356-84704375 | MS.gene033977:intron | 55.0% | |
| GGAAAGTTTGGAGGGGAGGA+AGG | + | chr4.3:84706976-84706995 | None:intergenic | 55.0% | |
| GGACGGTGAGGAAGTGGAAT+GGG | + | chr4.3:84706411-84706430 | None:intergenic | 55.0% | |
| GGCTGAAGCAAGGGAAAAGG+AGG | - | chr4.3:84703297-84703316 | MS.gene033977:intron | 55.0% | |
| TACGCGGTCCATCACGTTCT+TGG | - | chr4.3:84705124-84705143 | MS.gene033977:intron | 55.0% | |
| TCACCAGTGGTCCGTCCAAT+GGG | - | chr4.3:84703160-84703179 | MS.gene033977:intron | 55.0% | |
| TCTAGCGGTGGTGTGGATTC+CGG | - | chr4.3:84702566-84702585 | MS.gene033977:CDS | 55.0% | |
| TTGGGCCTCAGTACCTGAGA+AGG | - | chr4.3:84704608-84704627 | MS.gene033977:intron | 55.0% | |
| TTTGGAGGGGAGGAAGGGAT+AGG | + | chr4.3:84706970-84706989 | None:intergenic | 55.0% | |
| ! | AATGGGTTCTAGCGGTGGTG+TGG | - | chr4.3:84702559-84702578 | MS.gene033977:CDS | 55.0% |
| ! | AGGCCTCCAATGGGTTCTAG+CGG | - | chr4.3:84702551-84702570 | MS.gene033977:CDS | 55.0% |
| CCACCGCTAGAACCCATTGG+AGG | + | chr4.3:84702557-84702576 | None:intergenic | 60.0% | |
| CGTAGAGGACGGTGAGGAAG+TGG | + | chr4.3:84706417-84706436 | None:intergenic | 60.0% | |
| GCGGCAGTGCACTTCTGCAA+CGG | + | chr4.3:84704472-84704491 | None:intergenic | 60.0% | |
| TGTCCCATTGGACGGACCAC+TGG | + | chr4.3:84703166-84703185 | None:intergenic | 60.0% | |
| ! | CCTCCAATGGGTTCTAGCGG+TGG | - | chr4.3:84702554-84702573 | MS.gene033977:CDS | 60.0% |
| ! | GGGGAGGCACGTGGATTTCC+AGG | - | chr4.3:84704667-84704686 | MS.gene033977:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 84702542 | 84707218 | 84702542 | ID=MS.gene033977 |
| chr4.3 | mRNA | 84702542 | 84707218 | 84702542 | ID=MS.gene033977.t1;Parent=MS.gene033977 |
| chr4.3 | exon | 84706299 | 84707218 | 84706299 | ID=MS.gene033977.t1.exon1;Parent=MS.gene033977.t1 |
| chr4.3 | CDS | 84706299 | 84707218 | 84706299 | ID=cds.MS.gene033977.t1;Parent=MS.gene033977.t1 |
| chr4.3 | exon | 84702542 | 84702590 | 84702542 | ID=MS.gene033977.t1.exon2;Parent=MS.gene033977.t1 |
| chr4.3 | CDS | 84702542 | 84702590 | 84702542 | ID=cds.MS.gene033977.t1;Parent=MS.gene033977.t1 |
| Gene Sequence |
| Protein sequence |
