Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034132.t1 | KEH28669.1 | 96.6 | 325 | 11 | 0 | 1 | 325 | 1 | 325 | 1.60E-176 | 628.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034132.t1 | Q9SAH9 | 46.2 | 320 | 160 | 5 | 9 | 322 | 4 | 317 | 5.8e-71 | 269.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034132.t1 | A0A072UFZ3 | 96.6 | 325 | 11 | 0 | 1 | 325 | 1 | 325 | 1.1e-176 | 628.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034132 | MS.gene65685 | PPI |
MS.gene034132 | MS.gene63037 | PPI |
MS.gene96654 | MS.gene034132 | PPI |
MS.gene034132 | MS.gene053809 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034132.t1 | MTR_4g009690 | 96.615 | 325 | 11 | 0 | 1 | 325 | 1 | 325 | 0.0 | 646 |
MS.gene034132.t1 | MTR_4g009690 | 96.319 | 326 | 11 | 1 | 1 | 325 | 1 | 326 | 0.0 | 642 |
MS.gene034132.t1 | MTR_4g009040 | 94.769 | 325 | 16 | 1 | 1 | 324 | 1 | 325 | 0.0 | 630 |
MS.gene034132.t1 | MTR_4g009040 | 93.617 | 329 | 16 | 2 | 1 | 324 | 1 | 329 | 0.0 | 625 |
MS.gene034132.t1 | MTR_4g006940 | 47.222 | 324 | 158 | 5 | 4 | 322 | 11 | 326 | 1.34e-90 | 274 |
MS.gene034132.t1 | MTR_2g104960 | 47.937 | 315 | 154 | 4 | 13 | 322 | 20 | 329 | 2.00e-88 | 268 |
MS.gene034132.t1 | MTR_5g072620 | 42.500 | 320 | 175 | 4 | 10 | 322 | 2 | 319 | 8.46e-84 | 256 |
MS.gene034132.t1 | MTR_4g006940 | 50.181 | 277 | 129 | 4 | 4 | 279 | 11 | 279 | 2.14e-83 | 253 |
MS.gene034132.t1 | MTR_4g006940 | 50.181 | 277 | 129 | 4 | 4 | 279 | 11 | 279 | 2.14e-83 | 253 |
MS.gene034132.t1 | MTR_3g005170 | 42.492 | 313 | 171 | 6 | 13 | 318 | 10 | 320 | 2.44e-78 | 242 |
MS.gene034132.t1 | MTR_3g005210 | 42.271 | 317 | 174 | 6 | 9 | 318 | 2 | 316 | 1.38e-76 | 238 |
MS.gene034132.t1 | MTR_4g077100 | 42.405 | 316 | 171 | 7 | 11 | 318 | 9 | 321 | 2.88e-76 | 237 |
MS.gene034132.t1 | MTR_2g101330 | 41.121 | 321 | 178 | 5 | 12 | 324 | 4 | 321 | 2.92e-76 | 237 |
MS.gene034132.t1 | MTR_8g062440 | 42.679 | 321 | 172 | 8 | 11 | 323 | 6 | 322 | 4.79e-75 | 234 |
MS.gene034132.t1 | MTR_8g062440 | 42.857 | 322 | 171 | 9 | 11 | 323 | 6 | 323 | 2.61e-74 | 232 |
MS.gene034132.t1 | MTR_4g077130 | 41.379 | 319 | 176 | 7 | 8 | 318 | 4 | 319 | 4.02e-74 | 231 |
MS.gene034132.t1 | MTR_8g062110 | 42.587 | 317 | 170 | 8 | 10 | 318 | 15 | 327 | 2.21e-72 | 227 |
MS.gene034132.t1 | MTR_8g062110 | 42.722 | 316 | 169 | 8 | 11 | 318 | 7 | 318 | 2.88e-72 | 226 |
MS.gene034132.t1 | MTR_3g005170 | 43.704 | 270 | 146 | 5 | 13 | 278 | 10 | 277 | 9.98e-72 | 224 |
MS.gene034132.t1 | MTR_2g028620 | 40.979 | 327 | 178 | 7 | 8 | 323 | 5 | 327 | 1.84e-71 | 225 |
MS.gene034132.t1 | MTR_3g031650 | 38.679 | 318 | 190 | 3 | 10 | 322 | 2 | 319 | 6.28e-71 | 223 |
MS.gene034132.t1 | MTR_4g077100 | 43.750 | 272 | 147 | 5 | 11 | 278 | 9 | 278 | 2.48e-70 | 220 |
MS.gene034132.t1 | MTR_8g062440 | 44.944 | 267 | 140 | 6 | 11 | 273 | 6 | 269 | 1.81e-67 | 214 |
MS.gene034132.t1 | MTR_2g028620 | 44.526 | 274 | 144 | 5 | 8 | 275 | 5 | 276 | 4.99e-66 | 210 |
MS.gene034132.t1 | MTR_3g005170 | 38.658 | 313 | 152 | 6 | 13 | 318 | 10 | 289 | 1.04e-65 | 209 |
MS.gene034132.t1 | MTR_8g062110 | 41.958 | 286 | 152 | 7 | 11 | 292 | 7 | 282 | 2.11e-65 | 207 |
MS.gene034132.t1 | MTR_8g062110 | 43.333 | 270 | 146 | 6 | 11 | 276 | 7 | 273 | 2.13e-65 | 207 |
MS.gene034132.t1 | MTR_5g056600 | 35.938 | 320 | 193 | 6 | 12 | 322 | 3 | 319 | 2.70e-64 | 206 |
MS.gene034132.t1 | MTR_1g022440 | 36.420 | 324 | 192 | 10 | 10 | 322 | 5 | 325 | 3.12e-64 | 206 |
MS.gene034132.t1 | MTR_3g031650 | 39.179 | 268 | 161 | 2 | 10 | 275 | 2 | 269 | 4.56e-64 | 204 |
MS.gene034132.t1 | MTR_1g022445 | 36.137 | 321 | 191 | 9 | 13 | 322 | 8 | 325 | 1.30e-61 | 199 |
MS.gene034132.t1 | MTR_4g092080 | 37.764 | 331 | 181 | 10 | 11 | 321 | 12 | 337 | 5.78e-57 | 187 |
MS.gene034132.t1 | MTR_4g081440 | 34.097 | 349 | 200 | 11 | 1 | 324 | 8 | 351 | 7.47e-51 | 172 |
MS.gene034132.t1 | MTR_4g081440 | 33.718 | 347 | 205 | 10 | 1 | 324 | 12 | 356 | 7.53e-50 | 170 |
MS.gene034132.t1 | MTR_7g074880 | 34.365 | 323 | 197 | 8 | 12 | 322 | 7 | 326 | 3.44e-49 | 167 |
MS.gene034132.t1 | MTR_7g074820 | 34.969 | 326 | 194 | 9 | 12 | 322 | 7 | 329 | 6.80e-49 | 166 |
MS.gene034132.t1 | MTR_7g074730 | 33.538 | 325 | 199 | 9 | 12 | 322 | 7 | 328 | 5.33e-48 | 164 |
MS.gene034132.t1 | MTR_7g074850 | 33.028 | 327 | 199 | 10 | 12 | 322 | 7 | 329 | 2.77e-45 | 157 |
MS.gene034132.t1 | MTR_4g023730 | 36.036 | 333 | 189 | 11 | 8 | 322 | 3 | 329 | 2.16e-44 | 155 |
MS.gene034132.t1 | MTR_7g074710 | 33.642 | 324 | 198 | 11 | 12 | 322 | 7 | 326 | 2.44e-42 | 149 |
MS.gene034132.t1 | MTR_8g062710 | 75.532 | 94 | 13 | 1 | 12 | 105 | 19 | 102 | 6.30e-41 | 139 |
MS.gene034132.t1 | MTR_8g062110 | 36.245 | 229 | 136 | 6 | 101 | 322 | 11 | 236 | 1.59e-37 | 134 |
MS.gene034132.t1 | MTR_0164s0070 | 53.543 | 127 | 57 | 2 | 12 | 136 | 4 | 130 | 3.78e-36 | 129 |
MS.gene034132.t1 | MTR_5g029990 | 31.270 | 307 | 172 | 9 | 13 | 302 | 12 | 296 | 5.77e-34 | 126 |
MS.gene034132.t1 | MTR_7g074870 | 32.394 | 284 | 173 | 9 | 52 | 322 | 11 | 288 | 1.61e-32 | 122 |
MS.gene034132.t1 | MTR_8g062110 | 36.313 | 179 | 109 | 4 | 101 | 276 | 11 | 187 | 7.55e-31 | 115 |
MS.gene034132.t1 | MTR_8g062708 | 77.941 | 68 | 15 | 0 | 213 | 280 | 1 | 68 | 3.05e-30 | 111 |
MS.gene034132.t1 | MTR_2g013230 | 29.825 | 342 | 201 | 12 | 12 | 322 | 7 | 340 | 7.01e-30 | 116 |
MS.gene034132.t1 | MTR_6g406250 | 30.798 | 263 | 172 | 5 | 13 | 268 | 55 | 314 | 4.66e-29 | 114 |
MS.gene034132.t1 | MTR_2g013250 | 29.882 | 338 | 202 | 13 | 12 | 320 | 6 | 337 | 1.66e-27 | 110 |
MS.gene034132.t1 | MTR_7g117190 | 29.052 | 327 | 201 | 12 | 12 | 311 | 6 | 328 | 9.06e-27 | 108 |
MS.gene034132.t1 | MTR_7g117190 | 30.345 | 290 | 172 | 11 | 12 | 275 | 6 | 291 | 2.75e-26 | 106 |
MS.gene034132.t1 | MTR_6g406250 | 31.937 | 191 | 126 | 2 | 13 | 199 | 55 | 245 | 4.24e-24 | 99.4 |
MS.gene034132.t1 | MTR_2g013260 | 29.619 | 341 | 199 | 13 | 12 | 320 | 7 | 338 | 3.61e-22 | 95.9 |
MS.gene034132.t1 | MTR_0685s0030 | 33.333 | 159 | 99 | 2 | 165 | 318 | 2 | 158 | 6.30e-22 | 90.9 |
MS.gene034132.t1 | MTR_2g013260 | 30.847 | 295 | 165 | 11 | 12 | 276 | 7 | 292 | 1.66e-20 | 90.1 |
MS.gene034132.t1 | MTR_0685s0030 | 32.456 | 114 | 77 | 0 | 165 | 278 | 2 | 115 | 2.50e-16 | 74.3 |
MS.gene034132.t1 | MTR_3g011130 | 35.897 | 117 | 70 | 4 | 104 | 216 | 30 | 145 | 2.77e-15 | 72.4 |
MS.gene034132.t1 | MTR_3g101500 | 30.830 | 253 | 148 | 11 | 11 | 256 | 2 | 234 | 8.67e-14 | 71.6 |
MS.gene034132.t1 | MTR_3g101500 | 30.830 | 253 | 148 | 11 | 11 | 256 | 2 | 234 | 1.27e-13 | 70.9 |
MS.gene034132.t1 | MTR_3g101500 | 32.812 | 192 | 106 | 10 | 11 | 199 | 2 | 173 | 1.66e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034132.t1 | AT2G33590 | 63.898 | 313 | 111 | 2 | 12 | 322 | 8 | 320 | 3.19e-143 | 407 |
MS.gene034132.t1 | AT2G33600 | 61.661 | 313 | 118 | 2 | 12 | 322 | 8 | 320 | 1.49e-130 | 375 |
MS.gene034132.t1 | AT1G76470 | 55.975 | 318 | 134 | 3 | 11 | 322 | 5 | 322 | 9.00e-114 | 332 |
MS.gene034132.t1 | AT1G80820 | 45.768 | 319 | 163 | 4 | 9 | 322 | 4 | 317 | 5.04e-86 | 262 |
MS.gene034132.t1 | AT1G51410 | 45.171 | 321 | 165 | 7 | 11 | 323 | 7 | 324 | 1.89e-85 | 260 |
MS.gene034132.t1 | AT1G09510 | 47.205 | 322 | 161 | 6 | 8 | 322 | 3 | 322 | 5.93e-85 | 259 |
MS.gene034132.t1 | AT5G19440 | 43.636 | 330 | 174 | 7 | 1 | 323 | 1 | 325 | 2.00e-82 | 253 |
MS.gene034132.t1 | AT1G15950 | 44.969 | 318 | 165 | 4 | 10 | 322 | 10 | 322 | 2.21e-81 | 251 |
MS.gene034132.t1 | AT1G15950 | 44.969 | 318 | 165 | 4 | 10 | 322 | 10 | 322 | 2.21e-81 | 251 |
MS.gene034132.t1 | AT1G80820 | 49.265 | 272 | 132 | 3 | 9 | 279 | 4 | 270 | 9.43e-79 | 241 |
MS.gene034132.t1 | AT1G15950 | 44.805 | 308 | 160 | 4 | 10 | 312 | 10 | 312 | 4.83e-78 | 242 |
MS.gene034132.t1 | AT5G58490 | 42.222 | 315 | 177 | 3 | 13 | 322 | 9 | 323 | 1.95e-77 | 240 |
MS.gene034132.t1 | AT1G15950 | 48.188 | 276 | 137 | 3 | 10 | 284 | 10 | 280 | 2.67e-77 | 238 |
MS.gene034132.t1 | AT1G15950 | 48.718 | 273 | 134 | 3 | 10 | 281 | 10 | 277 | 3.76e-77 | 238 |
MS.gene034132.t1 | AT1G15950 | 48.708 | 271 | 133 | 3 | 10 | 279 | 10 | 275 | 3.43e-76 | 235 |
MS.gene034132.t1 | AT1G09490 | 41.824 | 318 | 178 | 5 | 11 | 322 | 6 | 322 | 5.97e-76 | 236 |
MS.gene034132.t1 | AT2G02400 | 39.432 | 317 | 181 | 6 | 13 | 322 | 6 | 318 | 2.36e-75 | 234 |
MS.gene034132.t1 | AT1G66800 | 44.514 | 319 | 164 | 7 | 11 | 322 | 6 | 318 | 2.38e-74 | 232 |
MS.gene034132.t1 | AT1G09480 | 42.453 | 318 | 176 | 5 | 11 | 322 | 6 | 322 | 3.93e-74 | 231 |
MS.gene034132.t1 | AT1G09480 | 42.453 | 318 | 176 | 5 | 11 | 322 | 53 | 369 | 8.88e-74 | 232 |
MS.gene034132.t1 | AT1G09500 | 41.796 | 323 | 180 | 5 | 8 | 322 | 3 | 325 | 1.66e-73 | 230 |
MS.gene034132.t1 | AT4G35420 | 40.867 | 323 | 175 | 7 | 12 | 324 | 7 | 323 | 2.50e-73 | 229 |
MS.gene034132.t1 | AT1G09500 | 44.815 | 270 | 146 | 3 | 8 | 274 | 3 | 272 | 1.35e-70 | 221 |
MS.gene034132.t1 | AT5G42800 | 38.532 | 327 | 187 | 9 | 7 | 322 | 2 | 325 | 2.43e-64 | 208 |
MS.gene034132.t1 | AT1G09490 | 39.286 | 280 | 164 | 4 | 48 | 322 | 13 | 291 | 3.93e-59 | 192 |
MS.gene034132.t1 | AT1G09500 | 40.071 | 282 | 162 | 4 | 48 | 322 | 10 | 291 | 1.76e-56 | 185 |
MS.gene034132.t1 | AT1G68540 | 33.544 | 316 | 202 | 5 | 15 | 322 | 6 | 321 | 2.50e-52 | 175 |
MS.gene034132.t1 | AT1G25460 | 33.651 | 315 | 201 | 5 | 15 | 322 | 6 | 319 | 9.10e-52 | 174 |
MS.gene034132.t1 | AT2G45400 | 34.925 | 335 | 183 | 11 | 13 | 322 | 40 | 364 | 8.25e-48 | 164 |
MS.gene034132.t1 | AT4G27250 | 33.739 | 329 | 195 | 9 | 1 | 311 | 1 | 324 | 1.63e-47 | 163 |
MS.gene034132.t1 | AT4G27250 | 33.728 | 338 | 193 | 9 | 1 | 311 | 1 | 334 | 5.20e-47 | 162 |
MS.gene034132.t1 | AT1G61720 | 33.934 | 333 | 201 | 10 | 10 | 325 | 10 | 340 | 4.44e-46 | 159 |
MS.gene034132.t1 | AT1G15950 | 40.625 | 224 | 128 | 2 | 104 | 322 | 1 | 224 | 4.47e-44 | 151 |
MS.gene034132.t1 | AT2G45400 | 35.315 | 286 | 158 | 8 | 13 | 279 | 40 | 317 | 4.94e-42 | 148 |
MS.gene034132.t1 | AT2G23910 | 32.609 | 276 | 167 | 7 | 14 | 281 | 11 | 275 | 1.23e-41 | 146 |
MS.gene034132.t1 | AT2G23910 | 33.210 | 271 | 159 | 7 | 14 | 273 | 11 | 270 | 1.30e-41 | 146 |
MS.gene034132.t1 | AT2G23910 | 33.210 | 271 | 159 | 7 | 14 | 273 | 11 | 270 | 1.63e-41 | 146 |
MS.gene034132.t1 | AT4G30470 | 34.444 | 270 | 156 | 7 | 14 | 273 | 11 | 269 | 1.19e-39 | 142 |
MS.gene034132.t1 | AT2G45400 | 31.975 | 319 | 182 | 12 | 27 | 322 | 1 | 307 | 2.63e-36 | 133 |
MS.gene034132.t1 | AT2G45400 | 38.356 | 219 | 118 | 6 | 13 | 218 | 40 | 254 | 1.14e-33 | 124 |
MS.gene034132.t1 | AT2G23910 | 32.479 | 234 | 137 | 6 | 50 | 273 | 14 | 236 | 2.23e-31 | 119 |
MS.gene034132.t1 | AT1G68540 | 31.884 | 207 | 136 | 3 | 121 | 322 | 8 | 214 | 7.92e-30 | 113 |
MS.gene034132.t1 | AT5G14700 | 32.234 | 273 | 167 | 8 | 9 | 268 | 51 | 318 | 4.84e-28 | 112 |
MS.gene034132.t1 | AT5G14700 | 32.093 | 215 | 134 | 5 | 10 | 214 | 52 | 264 | 6.60e-23 | 96.7 |
MS.gene034132.t1 | AT4G33360 | 26.482 | 253 | 161 | 9 | 10 | 256 | 12 | 245 | 3.22e-14 | 72.4 |
MS.gene034132.t1 | AT4G33360 | 26.482 | 253 | 161 | 9 | 10 | 256 | 12 | 245 | 3.78e-14 | 72.8 |
Find 66 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTGTCCTACTCTTGTTT+TGG | 0.178833 | 4.4:-89892292 | MS.gene034132:CDS |
CTCAGAGAAACTTCAAAGTT+TGG | 0.233591 | 4.4:-89890988 | MS.gene034132:CDS |
TCATCAATCGCTTTATCTTT+TGG | 0.246957 | 4.4:+89892622 | None:intergenic |
TTCAGCAAGTGTTCATATTT+CGG | 0.273006 | 4.4:+89893116 | None:intergenic |
AATAAGAAGGTGTGTGTAAC+TGG | 0.296410 | 4.4:-89894106 | MS.gene034132:CDS |
CGCTATCGTCACACGAGATT+TGG | 0.313010 | 4.4:-89891605 | MS.gene034132:CDS |
ATATGAACACTTGCTGAAAC+TGG | 0.323661 | 4.4:-89893111 | MS.gene034132:CDS |
CTGAATTTCGCGAAAAGAAC+TGG | 0.329580 | 4.4:-89892330 | MS.gene034132:CDS |
TTCGTTGGGTACTTGTAGTT+TGG | 0.331532 | 4.4:+89891559 | None:intergenic |
AAAGTTTGGGTTGGAAATTC+AGG | 0.331619 | 4.4:-89890974 | MS.gene034132:CDS |
ACTCTTTAAAGCAGATATCT+TGG | 0.332879 | 4.4:-89893066 | MS.gene034132:CDS |
CTGTTCTTCTGCTTCTGTCT+TGG | 0.343397 | 4.4:+89892356 | None:intergenic |
TATAAAGTTACCTCAGGATT+AGG | 0.352578 | 4.4:+89892963 | None:intergenic |
TCAGAGAAACTTCAAAGTTT+GGG | 0.368243 | 4.4:-89890987 | MS.gene034132:CDS |
CAAGACAGAAGCAGAAGAAC+AGG | 0.371007 | 4.4:-89892355 | MS.gene034132:CDS |
AACCAAGCTACTTGCGTTTG+TGG | 0.374252 | 4.4:+89892251 | None:intergenic |
TTTGTGGTTGACTGTAAAAT+TGG | 0.377992 | 4.4:+89892267 | None:intergenic |
GAAAATGAAGCTTACTTCGT+TGG | 0.382161 | 4.4:+89891544 | None:intergenic |
CTTAGAAGGCTGTGACTCAT+TGG | 0.384842 | 4.4:-89891731 | MS.gene034132:intron |
TGATTCTGTTGAGAGCTATA+AGG | 0.391851 | 4.4:-89890931 | MS.gene034132:CDS |
TCCGTTTACTCCGCAATTGT+TGG | 0.399978 | 4.4:-89893035 | MS.gene034132:CDS |
TCCATGGACAAAGTAACCTT+TGG | 0.412376 | 4.4:+89894039 | None:intergenic |
TCCAACAATTGCGGAGTAAA+CGG | 0.413187 | 4.4:+89893034 | None:intergenic |
CATTGGAGAATAAGCTTCGT+TGG | 0.422203 | 4.4:-89891714 | MS.gene034132:CDS |
TATCTGCTTTAAAGAGTGTA+AGG | 0.426168 | 4.4:+89893072 | None:intergenic |
AAAATGAAGCTTACTTCGTT+GGG | 0.445192 | 4.4:+89891545 | None:intergenic |
AAGCGATTGATGAATCTTGT+TGG | 0.449691 | 4.4:-89892612 | MS.gene034132:CDS |
CATGGAACTGTTAGAGAGCC+TGG | 0.466759 | 4.4:-89894022 | MS.gene034132:intron |
AGAAACTTCAAAGTTTGGGT+TGG | 0.469337 | 4.4:-89890983 | MS.gene034132:CDS |
TCCAAAGGTTACTTTGTCCA+TGG | 0.474794 | 4.4:-89894040 | MS.gene034132:CDS |
GGTACAACTGTTGAAGGTAC+AGG | 0.487565 | 4.4:+89892984 | None:intergenic |
GTTGAGAGCTATAAGGAGGC+TGG | 0.491936 | 4.4:-89890924 | MS.gene034132:CDS |
ATGAGAATCACGAGGCAAAC+GGG | 0.492326 | 4.4:-89891648 | MS.gene034132:CDS |
TTAGCAGTTCCCTTCACTGC+AGG | 0.496393 | 4.4:+89892730 | None:intergenic |
AAGGTGTGTGTAACTGGAGC+AGG | 0.505575 | 4.4:-89894100 | MS.gene034132:CDS |
CAGGAGGGTTTGTAGCATCA+TGG | 0.506329 | 4.4:-89894081 | MS.gene034132:CDS |
GGATTAGGTACAACTGTTGA+AGG | 0.511645 | 4.4:+89892978 | None:intergenic |
TATGAGAATCACGAGGCAAA+CGG | 0.517667 | 4.4:-89891649 | MS.gene034132:CDS |
GGGTTGGAAATTCAGGCCAT+TGG | 0.519755 | 4.4:-89890967 | MS.gene034132:CDS |
GTTAAGCTTCTTCTTTCCAA+AGG | 0.521805 | 4.4:-89894055 | MS.gene034132:CDS |
TTGGAAATTCAGGCCATTGG+AGG | 0.526899 | 4.4:-89890964 | MS.gene034132:CDS |
AGGAGATAATGGAAACAAGT+GGG | 0.540632 | 4.4:-89894141 | None:intergenic |
TCAATGAGTGTTTCCTCCAA+TGG | 0.543548 | 4.4:+89890951 | None:intergenic |
AACCACAAACGCAAGTAGCT+TGG | 0.545980 | 4.4:-89892253 | MS.gene034132:CDS |
CAGGCTCTCTAACAGTTCCA+TGG | 0.553939 | 4.4:+89894023 | None:intergenic |
GTGATTGAGCCTGCAGTGAA+GGG | 0.570026 | 4.4:-89892739 | MS.gene034132:CDS |
TGCTGGCAGCTATATTGAGA+TGG | 0.571107 | 4.4:-89891030 | MS.gene034132:intron |
GGAGATAATGGAAACAAGTG+GGG | 0.572345 | 4.4:-89894140 | None:intergenic |
ATTGGTCCCAAAACAAGAGT+AGG | 0.572490 | 4.4:+89892285 | None:intergenic |
GTGTGTGTAACTGGAGCAGG+AGG | 0.579894 | 4.4:-89894097 | MS.gene034132:CDS |
TATCGTCACACGAGATTTGG+TGG | 0.581985 | 4.4:-89891602 | MS.gene034132:CDS |
AGTGATTGAGCCTGCAGTGA+AGG | 0.582476 | 4.4:-89892740 | MS.gene034132:CDS |
GAGGAGATAATGGAAACAAG+TGG | 0.583352 | 4.4:-89894142 | None:intergenic |
AAGGTACAGGGCTAGCAACA+TGG | 0.584108 | 4.4:+89892997 | None:intergenic |
GGGTGTTAATAACAATAAGA+AGG | 0.597736 | 4.4:-89894119 | MS.gene034132:CDS |
AGACTACTGCAAAAGTACTC+AGG | 0.607907 | 4.4:-89892581 | MS.gene034132:intron |
TGTAGTTGATGCAATACTGT+TGG | 0.608013 | 4.4:-89891674 | MS.gene034132:CDS |
TGCACTGCATCCAACAATTG+CGG | 0.621267 | 4.4:+89893025 | None:intergenic |
GTACAACTGTTGAAGGTACA+GGG | 0.621515 | 4.4:+89892985 | None:intergenic |
TTCTGTTGAGAGCTATAAGG+AGG | 0.627623 | 4.4:-89890928 | MS.gene034132:CDS |
AGCTTGTCTCAAAGCTAATG+TGG | 0.639403 | 4.4:-89892698 | MS.gene034132:CDS |
GAGATAATGGAAACAAGTGG+GGG | 0.650626 | 4.4:-89894139 | None:intergenic |
GAAAAGAACTGGACTTAACG+TGG | 0.670351 | 4.4:-89892319 | MS.gene034132:CDS |
AACAGTTGTACCTAATCCTG+AGG | 0.672409 | 4.4:-89892973 | MS.gene034132:intron |
TGTGTGTAACTGGAGCAGGA+GGG | 0.744318 | 4.4:-89894096 | MS.gene034132:CDS |
GTTGGCTTATGAGAATCACG+AGG | 0.795304 | 4.4:-89891656 | MS.gene034132:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATTGAAAATTAAC+AGG | + | chr4.4:89891064-89891083 | None:intergenic | 10.0% |
!! | ATGAAATTAGTAAATTATAA+TGG | + | chr4.4:89893229-89893248 | None:intergenic | 10.0% |
!!! | TTTTTAATAAGAATTTGATA+AGG | + | chr4.4:89892847-89892866 | None:intergenic | 10.0% |
!! | AAGAATTTCATTACTATATA+TGG | - | chr4.4:89891181-89891200 | MS.gene034132:intron | 15.0% |
!! | AATTAGTAAATTATAATGGT+AGG | + | chr4.4:89893225-89893244 | None:intergenic | 15.0% |
!! | ATACAAAGGAAAAAAAAATA+GGG | - | chr4.4:89891588-89891607 | MS.gene034132:CDS | 15.0% |
!! | ACATCTCAAATATATATACA+GGG | + | chr4.4:89891542-89891561 | None:intergenic | 20.0% |
!! | CCAATGATAATTTGATAAAA+CGG | + | chr4.4:89893889-89893908 | None:intergenic | 20.0% |
!! | CTGATAATATTTAAATTTCG+AGG | + | chr4.4:89893540-89893559 | None:intergenic | 20.0% |
!! | GATACAAAGGAAAAAAAAAT+AGG | - | chr4.4:89891587-89891606 | MS.gene034132:CDS | 20.0% |
!! | GGGATTAAATATATATCTAT+CGG | + | chr4.4:89891522-89891541 | None:intergenic | 20.0% |
!! | TATAACCATCAAATCTATAT+AGG | + | chr4.4:89893967-89893986 | None:intergenic | 20.0% |
!! | TCAAAAGAATAAGAAAATAG+AGG | + | chr4.4:89891847-89891866 | None:intergenic | 20.0% |
!!! | CTTTATCTTTTGGTAAATTA+GGG | + | chr4.4:89892409-89892428 | None:intergenic | 20.0% |
!!! | TATGTATCCATAAATTTGTT+TGG | + | chr4.4:89891266-89891285 | None:intergenic | 20.0% |
!!! | TCATTTAAACAATTAGCTTT+TGG | + | chr4.4:89891343-89891362 | None:intergenic | 20.0% |
!!! | TCTATTTTCTTATTCTTTTG+AGG | - | chr4.4:89891846-89891865 | MS.gene034132:intron | 20.0% |
!!! | TCTTATGTTTTTGACATTAA+CGG | + | chr4.4:89891491-89891510 | None:intergenic | 20.0% |
!!! | TTTGGGCTTTAATATTTATT+TGG | - | chr4.4:89892957-89892976 | MS.gene034132:intron | 20.0% |
! | AAGAGTCATTTACTACAATT+TGG | + | chr4.4:89891668-89891687 | None:intergenic | 25.0% |
! | AATTGAGCTTTACATAACAA+CGG | + | chr4.4:89891692-89891711 | None:intergenic | 25.0% |
! | ACTATATATGGAAAGAAACA+AGG | - | chr4.4:89891193-89891212 | MS.gene034132:intron | 25.0% |
! | AGAATGTCCAAACAAATTTA+TGG | - | chr4.4:89891256-89891275 | MS.gene034132:intron | 25.0% |
! | AGAGTCATTTACTACAATTT+GGG | + | chr4.4:89891667-89891686 | None:intergenic | 25.0% |
! | ATTTGATAAGGCATATTAGT+AGG | + | chr4.4:89892835-89892854 | None:intergenic | 25.0% |
! | CACATCTCAAATATATATAC+AGG | + | chr4.4:89891543-89891562 | None:intergenic | 25.0% |
! | GAGATATCAATAATTGTATC+AGG | - | chr4.4:89893689-89893708 | MS.gene034132:intron | 25.0% |
! | TATAACATGTTGTCTGTTTA+AGG | + | chr4.4:89891727-89891746 | None:intergenic | 25.0% |
!! | ATTTACTACAATTTGGGATT+TGG | + | chr4.4:89891661-89891680 | None:intergenic | 25.0% |
!! | CCGTTTTATCAAATTATCAT+TGG | - | chr4.4:89893886-89893905 | MS.gene034132:intron | 25.0% |
!! | CTTCACCATTATATTGTTTT+GGG | - | chr4.4:89893099-89893118 | MS.gene034132:CDS | 25.0% |
!! | GCTTTATCTTTTGGTAAATT+AGG | + | chr4.4:89892410-89892429 | None:intergenic | 25.0% |
!! | TTGATTTTAAACACATGTGT+CGG | + | chr4.4:89893861-89893880 | None:intergenic | 25.0% |
!!! | ATTTTAGTCCCTAAAATTGA+AGG | + | chr4.4:89891309-89891328 | None:intergenic | 25.0% |
!!! | TTCAATTTTAGGGACTAAAA+TGG | - | chr4.4:89891308-89891327 | MS.gene034132:intron | 25.0% |
AAAATGAAGCTTACTTCGTT+GGG | + | chr4.4:89893496-89893515 | None:intergenic | 30.0% | |
AAACAATATAATGGTGAAGC+AGG | + | chr4.4:89893098-89893117 | None:intergenic | 30.0% | |
ACATAACAGATTCAGAGTTT+GGG | - | chr4.4:89892940-89892959 | MS.gene034132:intron | 30.0% | |
ACTTGCCTATATAGATTTGA+TGG | - | chr4.4:89893959-89893978 | MS.gene034132:intron | 30.0% | |
AGTCCTATGATGGTAATAAA+TGG | + | chr4.4:89891423-89891442 | None:intergenic | 30.0% | |
ATACTCTATACAACTTGTGA+TGG | - | chr4.4:89891283-89891302 | MS.gene034132:intron | 30.0% | |
ATGTATGAATATGCCTTTCA+TGG | - | chr4.4:89893173-89893192 | MS.gene034132:intron | 30.0% | |
CATCCATTTATTACCATCAT+AGG | - | chr4.4:89891417-89891436 | MS.gene034132:intron | 30.0% | |
CTGAAAATCTTTCAACTTAC+TGG | + | chr4.4:89892174-89892193 | None:intergenic | 30.0% | |
GAAAAACTGCAAGTAATGTT+GGG | - | chr4.4:89893741-89893760 | MS.gene034132:intron | 30.0% | |
GACACTACTATCATATCATA+AGG | + | chr4.4:89892530-89892549 | None:intergenic | 30.0% | |
GGGTGTTAATAACAATAAGA+AGG | - | chr4.4:89890919-89890938 | MS.gene034132:CDS | 30.0% | |
GTATTGCCATACACTTATAA+CGG | + | chr4.4:89893071-89893090 | None:intergenic | 30.0% | |
TAATTGTATCAGGAAAACTG+TGG | - | chr4.4:89893699-89893718 | MS.gene034132:intron | 30.0% | |
TACATAACAGATTCAGAGTT+TGG | - | chr4.4:89892939-89892958 | MS.gene034132:intron | 30.0% | |
TATAAAGTTACCTCAGGATT+AGG | + | chr4.4:89892078-89892097 | None:intergenic | 30.0% | |
TCAGAGAAACTTCAAAGTTT+GGG | - | chr4.4:89894051-89894070 | MS.gene034132:CDS | 30.0% | |
TGTATGAATATGCCTTTCAT+GGG | - | chr4.4:89893174-89893193 | MS.gene034132:intron | 30.0% | |
TTCAGCAAGTGTTCATATTT+CGG | + | chr4.4:89891925-89891944 | None:intergenic | 30.0% | |
TTCATCTTGTCTTTCTTAGA+AGG | - | chr4.4:89893293-89893312 | MS.gene034132:intron | 30.0% | |
TTTGTGGTTGACTGTAAAAT+TGG | + | chr4.4:89892774-89892793 | None:intergenic | 30.0% | |
! | GCTTCACCATTATATTGTTT+TGG | - | chr4.4:89893098-89893117 | MS.gene034132:CDS | 30.0% |
! | GTTCTCGTCAAACTTTTAAA+AGG | - | chr4.4:89892807-89892826 | MS.gene034132:intron | 30.0% |
! | TCATCAATCGCTTTATCTTT+TGG | + | chr4.4:89892419-89892438 | None:intergenic | 30.0% |
! | TTTTAGCCGTTATAAGTGTA+TGG | - | chr4.4:89893062-89893081 | MS.gene034132:CDS | 30.0% |
!! | ACTCTTTAAAGCAGATATCT+TGG | - | chr4.4:89891972-89891991 | MS.gene034132:intron | 30.0% |
!! | TATCTGCTTTAAAGAGTGTA+AGG | + | chr4.4:89891969-89891988 | None:intergenic | 30.0% |
!! | TTTGTATACAAGTGTTGAAG+AGG | - | chr4.4:89891810-89891829 | MS.gene034132:intron | 30.0% |
!!! | ATTTGTCCTACTCTTGTTTT+GGG | - | chr4.4:89892747-89892766 | MS.gene034132:CDS | 30.0% |
!!! | CATTATATTGTTTTGGGAGT+CGG | - | chr4.4:89893105-89893124 | MS.gene034132:CDS | 30.0% |
AACATGTTGTCTGTTTAAGG+TGG | + | chr4.4:89891724-89891743 | None:intergenic | 35.0% | |
AACGAAGTCAATCATTGATG+AGG | - | chr4.4:89893640-89893659 | MS.gene034132:intron | 35.0% | |
AAGCGATTGATGAATCTTGT+TGG | - | chr4.4:89892426-89892445 | MS.gene034132:intron | 35.0% | |
ACAATGCGAGTTAAAATCCT+TGG | - | chr4.4:89892886-89892905 | MS.gene034132:intron | 35.0% | |
AGAAACTTCAAAGTTTGGGT+TGG | - | chr4.4:89894055-89894074 | MS.gene034132:CDS | 35.0% | |
ATATAATGGTGAAGCAGGTA+TGG | + | chr4.4:89893093-89893112 | None:intergenic | 35.0% | |
ATGAGATGAGAAATAGTACC+AGG | + | chr4.4:89891037-89891056 | None:intergenic | 35.0% | |
ATGGAAAGAAACAAGGCTTA+AGG | - | chr4.4:89891200-89891219 | MS.gene034132:intron | 35.0% | |
CGACTCCCAAAACAATATAA+TGG | + | chr4.4:89893107-89893126 | None:intergenic | 35.0% | |
CTCAGAGAAACTTCAAAGTT+TGG | - | chr4.4:89894050-89894069 | MS.gene034132:CDS | 35.0% | |
GAAAATGAAGCTTACTTCGT+TGG | + | chr4.4:89893497-89893516 | None:intergenic | 35.0% | |
GAACGTTATAAAGTTACCTC+AGG | + | chr4.4:89892084-89892103 | None:intergenic | 35.0% | |
GGAAAAACTGCAAGTAATGT+TGG | - | chr4.4:89893740-89893759 | MS.gene034132:intron | 35.0% | |
GTATGAATATGCCTTTCATG+GGG | - | chr4.4:89893175-89893194 | MS.gene034132:intron | 35.0% | |
GTTAAGCTTCTTCTTTCCAA+AGG | - | chr4.4:89890983-89891002 | MS.gene034132:CDS | 35.0% | |
TGATTCTGTTGAGAGCTATA+AGG | - | chr4.4:89894107-89894126 | MS.gene034132:CDS | 35.0% | |
! | AATAAGAAGGTGTGTGTAAC+TGG | - | chr4.4:89890932-89890951 | MS.gene034132:CDS | 35.0% |
! | AGTTCTTTTCGCGAAATTCA+GGG | + | chr4.4:89892709-89892728 | None:intergenic | 35.0% |
! | ATATGAACACTTGCTGAAAC+TGG | - | chr4.4:89891927-89891946 | MS.gene034132:intron | 35.0% |
! | TATGTTAGAGTTTTCCTTGC+TGG | - | chr4.4:89893991-89894010 | MS.gene034132:intron | 35.0% |
! | TGTAGTTGATGCAATACTGT+TGG | - | chr4.4:89893364-89893383 | MS.gene034132:intron | 35.0% |
! | TGTGATGGCCTTCAATTTTA+GGG | - | chr4.4:89891298-89891317 | MS.gene034132:intron | 35.0% |
! | TTGTGATGGCCTTCAATTTT+AGG | - | chr4.4:89891297-89891316 | MS.gene034132:intron | 35.0% |
!! | AAAGTTTGGGTTGGAAATTC+AGG | - | chr4.4:89894064-89894083 | MS.gene034132:CDS | 35.0% |
!! | CATTTGTCCTACTCTTGTTT+TGG | - | chr4.4:89892746-89892765 | MS.gene034132:CDS | 35.0% |
!!! | GGATTTTAACTCGCATTGTA+CGG | + | chr4.4:89892885-89892904 | None:intergenic | 35.0% |
!!! | TGGTTCTAGTTTTGCTTTTG+TGG | - | chr4.4:89892138-89892157 | MS.gene034132:intron | 35.0% |
!!! | TGTCACTTCAGACTTTTTCA+TGG | + | chr4.4:89892245-89892264 | None:intergenic | 35.0% |
AAAGCAAAACTAGAACCACG+CGG | + | chr4.4:89892136-89892155 | None:intergenic | 40.0% | |
AACAGTTGTACCTAATCCTG+AGG | - | chr4.4:89892065-89892084 | MS.gene034132:intron | 40.0% | |
AGCTTGTCTCAAAGCTAATG+TGG | - | chr4.4:89892340-89892359 | MS.gene034132:CDS | 40.0% | |
AGTGTCGTCGAAATTGTTCA+TGG | - | chr4.4:89892204-89892223 | MS.gene034132:intron | 40.0% | |
ATTGGTCCCAAAACAAGAGT+AGG | + | chr4.4:89892756-89892775 | None:intergenic | 40.0% | |
CAGGAAAATATCCCCATGAA+AGG | + | chr4.4:89893189-89893208 | None:intergenic | 40.0% | |
CATTGGAGAATAAGCTTCGT+TGG | - | chr4.4:89893324-89893343 | MS.gene034132:intron | 40.0% | |
CTGAATTTCGCGAAAAGAAC+TGG | - | chr4.4:89892708-89892727 | MS.gene034132:CDS | 40.0% | |
GAAAAGAACTGGACTTAACG+TGG | - | chr4.4:89892719-89892738 | MS.gene034132:CDS | 40.0% | |
GACACTATTCGTGTGAGTAT+CGG | - | chr4.4:89891610-89891629 | MS.gene034132:CDS | 40.0% | |
GCATCGAAACTTCAGTTTGA+AGG | - | chr4.4:89893806-89893825 | MS.gene034132:intron | 40.0% | |
GGATTAGGTACAACTGTTGA+AGG | + | chr4.4:89892063-89892082 | None:intergenic | 40.0% | |
GTAGCAACTTGCAAAACTAG+AGG | - | chr4.4:89891377-89891396 | MS.gene034132:intron | 40.0% | |
GTATTCAAAGCTTAATCCGC+AGG | - | chr4.4:89892271-89892290 | MS.gene034132:CDS | 40.0% | |
TAATTTGATATGTCACCGCG+TGG | - | chr4.4:89892118-89892137 | MS.gene034132:intron | 40.0% | |
TATGAGAATCACGAGGCAAA+CGG | - | chr4.4:89893389-89893408 | MS.gene034132:intron | 40.0% | |
TCAATGAGTGTTTCCTCCAA+TGG | + | chr4.4:89894090-89894109 | None:intergenic | 40.0% | |
TCCAACAATTGCGGAGTAAA+CGG | + | chr4.4:89892007-89892026 | None:intergenic | 40.0% | |
TCCATGGACAAAGTAACCTT+TGG | + | chr4.4:89891002-89891021 | None:intergenic | 40.0% | |
TGAAACACTGACACATACAC+CGG | + | chr4.4:89893934-89893953 | None:intergenic | 40.0% | |
TGGCATAACAATACCAGTTC+TGG | + | chr4.4:89892665-89892684 | None:intergenic | 40.0% | |
TTCGTTGGGTACTTGTAGTT+TGG | + | chr4.4:89893482-89893501 | None:intergenic | 40.0% | |
TTCTGTTGAGAGCTATAAGG+AGG | - | chr4.4:89894110-89894129 | MS.gene034132:CDS | 40.0% | |
! | CAGTTCTTTTCGCGAAATTC+AGG | + | chr4.4:89892710-89892729 | None:intergenic | 40.0% |
! | GTACAACTGTTGAAGGTACA+GGG | + | chr4.4:89892056-89892075 | None:intergenic | 40.0% |
! | GTTGTCTGTTTAAGGTGGTT+TGG | + | chr4.4:89891719-89891738 | None:intergenic | 40.0% |
! | TCCAAAGGTTACTTTGTCCA+TGG | - | chr4.4:89890998-89891017 | MS.gene034132:CDS | 40.0% |
! | TCTAACGTGTGTCGATACAA+AGG | - | chr4.4:89891574-89891593 | MS.gene034132:CDS | 40.0% |
! | TTGAAGGTGTATCTTGTGTC+CGG | - | chr4.4:89893822-89893841 | MS.gene034132:intron | 40.0% |
!! | AGACTACTGCAAAAGTACTC+AGG | - | chr4.4:89892457-89892476 | MS.gene034132:intron | 40.0% |
AACCAAGCTACTTGCGTTTG+TGG | + | chr4.4:89892790-89892809 | None:intergenic | 45.0% | |
AACCACAAACGCAAGTAGCT+TGG | - | chr4.4:89892785-89892804 | MS.gene034132:intron | 45.0% | |
AATCCTTGGTCATGTGACAG+TGG | - | chr4.4:89892900-89892919 | MS.gene034132:intron | 45.0% | |
ACTGTGGAGTCATGAGAATG+AGG | - | chr4.4:89893715-89893734 | MS.gene034132:intron | 45.0% | |
AGCGTATGTCTGACAATTGC+AGG | - | chr4.4:89891895-89891914 | MS.gene034132:intron | 45.0% | |
ATGAGAATCACGAGGCAAAC+GGG | - | chr4.4:89893390-89893409 | MS.gene034132:intron | 45.0% | |
CAAGACAGAAGCAGAAGAAC+AGG | - | chr4.4:89892683-89892702 | MS.gene034132:CDS | 45.0% | |
CTGTTCTTCTGCTTCTGTCT+TGG | + | chr4.4:89892685-89892704 | None:intergenic | 45.0% | |
CTTAGAAGGCTGTGACTCAT+TGG | - | chr4.4:89893307-89893326 | MS.gene034132:intron | 45.0% | |
GACACACGTTAGACACTTCT+TGG | + | chr4.4:89891567-89891586 | None:intergenic | 45.0% | |
GGTAGGAGAACAAGTTATGC+AGG | + | chr4.4:89893208-89893227 | None:intergenic | 45.0% | |
GTCTCTATGTTGACACGAGT+CGG | + | chr4.4:89891637-89891656 | None:intergenic | 45.0% | |
TACGTGTCAGAGTCCTATGA+TGG | + | chr4.4:89891433-89891452 | None:intergenic | 45.0% | |
TATCGTCACACGAGATTTGG+TGG | - | chr4.4:89893436-89893455 | MS.gene034132:intron | 45.0% | |
TCCGTTTACTCCGCAATTGT+TGG | - | chr4.4:89892003-89892022 | MS.gene034132:intron | 45.0% | |
TCTCAATATAGCTGCCAGCA+AGG | + | chr4.4:89894008-89894027 | None:intergenic | 45.0% | |
TGCACTGCATCCAACAATTG+CGG | + | chr4.4:89892016-89892035 | None:intergenic | 45.0% | |
TGCTGGCAGCTATATTGAGA+TGG | - | chr4.4:89894008-89894027 | MS.gene034132:intron | 45.0% | |
TGGAGTCATGAGAATGAGGA+AGG | - | chr4.4:89893719-89893738 | MS.gene034132:intron | 45.0% | |
TGTCGCATATGATCCAGAAC+TGG | - | chr4.4:89892649-89892668 | MS.gene034132:CDS | 45.0% | |
TTCAAAGCTTAATCCGCAGG+TGG | - | chr4.4:89892274-89892293 | MS.gene034132:CDS | 45.0% | |
TTGGAAATTCAGGCCATTGG+AGG | - | chr4.4:89894074-89894093 | MS.gene034132:CDS | 45.0% | |
! | GGTACAACTGTTGAAGGTAC+AGG | + | chr4.4:89892057-89892076 | None:intergenic | 45.0% |
! | GTTGGCTTATGAGAATCACG+AGG | - | chr4.4:89893382-89893401 | MS.gene034132:intron | 45.0% |
AAGGTGTGTGTAACTGGAGC+AGG | - | chr4.4:89890938-89890957 | MS.gene034132:CDS | 50.0% | |
ACACCACTGTCACATGACCA+AGG | + | chr4.4:89892906-89892925 | None:intergenic | 50.0% | |
ACTGACACATACACCGGACA+CGG | + | chr4.4:89893928-89893947 | None:intergenic | 50.0% | |
AGTGATTGAGCCTGCAGTGA+AGG | - | chr4.4:89892298-89892317 | MS.gene034132:CDS | 50.0% | |
CAGGAGGGTTTGTAGCATCA+TGG | - | chr4.4:89890957-89890976 | MS.gene034132:CDS | 50.0% | |
CAGGCTCTCTAACAGTTCCA+TGG | + | chr4.4:89891018-89891037 | None:intergenic | 50.0% | |
CATGGAACTGTTAGAGAGCC+TGG | - | chr4.4:89891016-89891035 | MS.gene034132:CDS | 50.0% | |
CGCTATCGTCACACGAGATT+TGG | - | chr4.4:89893433-89893452 | MS.gene034132:intron | 50.0% | |
CTGCAAGTAATGTTGGGCGA+TGG | - | chr4.4:89893747-89893766 | MS.gene034132:intron | 50.0% | |
GGGTTGGAAATTCAGGCCAT+TGG | - | chr4.4:89894071-89894090 | MS.gene034132:CDS | 50.0% | |
GTGATTGAGCCTGCAGTGAA+GGG | - | chr4.4:89892299-89892318 | MS.gene034132:CDS | 50.0% | |
GTTGAGAGCTATAAGGAGGC+TGG | - | chr4.4:89894114-89894133 | MS.gene034132:CDS | 50.0% | |
TGTGTGTAACTGGAGCAGGA+GGG | - | chr4.4:89890942-89890961 | MS.gene034132:CDS | 50.0% | |
TTAGCAGTTCCCTTCACTGC+AGG | + | chr4.4:89892311-89892330 | None:intergenic | 50.0% | |
! | AAGGTACAGGGCTAGCAACA+TGG | + | chr4.4:89892044-89892063 | None:intergenic | 50.0% |
GGCTCAATCACTTCCACCTG+CGG | + | chr4.4:89892290-89892309 | None:intergenic | 55.0% | |
GTGTGTGTAACTGGAGCAGG+AGG | - | chr4.4:89890941-89890960 | MS.gene034132:CDS | 55.0% | |
TAGTGTGTCAGTGCCGTGTC+CGG | - | chr4.4:89893912-89893931 | MS.gene034132:intron | 55.0% | |
TGTCGGTATCGTCTCGATGC+CGG | + | chr4.4:89893844-89893863 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 89890905 | 89894155 | 89890905 | ID=MS.gene034132 |
chr4.4 | mRNA | 89890905 | 89894155 | 89890905 | ID=MS.gene034132.t1;Parent=MS.gene034132 |
chr4.4 | exon | 89894023 | 89894155 | 89894023 | ID=MS.gene034132.t1.exon1;Parent=MS.gene034132.t1 |
chr4.4 | CDS | 89894023 | 89894155 | 89894023 | ID=cds.MS.gene034132.t1;Parent=MS.gene034132.t1 |
chr4.4 | exon | 89892974 | 89893143 | 89892974 | ID=MS.gene034132.t1.exon2;Parent=MS.gene034132.t1 |
chr4.4 | CDS | 89892974 | 89893143 | 89892974 | ID=cds.MS.gene034132.t1;Parent=MS.gene034132.t1 |
chr4.4 | exon | 89892582 | 89892767 | 89892582 | ID=MS.gene034132.t1.exon3;Parent=MS.gene034132.t1 |
chr4.4 | CDS | 89892582 | 89892767 | 89892582 | ID=cds.MS.gene034132.t1;Parent=MS.gene034132.t1 |
chr4.4 | exon | 89892232 | 89892394 | 89892232 | ID=MS.gene034132.t1.exon4;Parent=MS.gene034132.t1 |
chr4.4 | CDS | 89892232 | 89892394 | 89892232 | ID=cds.MS.gene034132.t1;Parent=MS.gene034132.t1 |
chr4.4 | exon | 89891559 | 89891745 | 89891559 | ID=MS.gene034132.t1.exon5;Parent=MS.gene034132.t1 |
chr4.4 | CDS | 89891559 | 89891745 | 89891559 | ID=cds.MS.gene034132.t1;Parent=MS.gene034132.t1 |
chr4.4 | exon | 89890905 | 89891043 | 89890905 | ID=MS.gene034132.t1.exon6;Parent=MS.gene034132.t1 |
chr4.4 | CDS | 89890905 | 89891043 | 89890905 | ID=cds.MS.gene034132.t1;Parent=MS.gene034132.t1 |
Gene Sequence |
Protein sequence |