Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034659.t1 | XP_013467775.1 | 97.7 | 596 | 14 | 0 | 1 | 596 | 1 | 596 | 0.00E+00 | 1186.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034659.t1 | Q9M9Y8 | 83.9 | 553 | 85 | 2 | 48 | 596 | 43 | 595 | 3.7e-273 | 941.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034659.t1 | A0A072VJ38 | 97.7 | 596 | 14 | 0 | 1 | 596 | 1 | 596 | 0.0e+00 | 1186.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034659 | MS.gene95041 | PPI |
| MS.gene034659 | MS.gene43489 | PPI |
| MS.gene034659 | MS.gene012800 | PPI |
| MS.gene034659 | MS.gene042039 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034659.t1 | MTR_1g054965 | 97.651 | 596 | 14 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1202 |
| MS.gene034659.t1 | MTR_1g054965 | 97.200 | 500 | 14 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1002 |
| MS.gene034659.t1 | MTR_1g054965 | 99.091 | 440 | 4 | 0 | 157 | 596 | 1 | 440 | 0.0 | 907 |
| MS.gene034659.t1 | MTR_1g054965 | 98.288 | 292 | 5 | 0 | 209 | 500 | 11 | 302 | 0.0 | 594 |
| MS.gene034659.t1 | MTR_4g134780 | 31.315 | 578 | 329 | 19 | 42 | 584 | 33 | 577 | 5.72e-64 | 220 |
| MS.gene034659.t1 | MTR_8g077580 | 23.886 | 561 | 339 | 18 | 79 | 572 | 22 | 561 | 1.12e-13 | 74.3 |
| MS.gene034659.t1 | MTR_1g034450 | 22.820 | 539 | 340 | 18 | 79 | 555 | 23 | 547 | 2.12e-12 | 70.5 |
| MS.gene034659.t1 | MTR_1g034450 | 25.000 | 292 | 169 | 10 | 304 | 557 | 118 | 397 | 2.31e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034659.t1 | AT1G06820 | 86.914 | 512 | 66 | 1 | 70 | 580 | 68 | 579 | 0.0 | 925 |
| MS.gene034659.t1 | AT1G06820 | 85.687 | 517 | 71 | 2 | 70 | 585 | 68 | 582 | 0.0 | 915 |
| MS.gene034659.t1 | AT1G06820 | 87.104 | 442 | 57 | 0 | 139 | 580 | 19 | 460 | 0.0 | 813 |
| MS.gene034659.t1 | AT1G06820 | 86.111 | 432 | 59 | 1 | 70 | 500 | 68 | 499 | 0.0 | 769 |
| MS.gene034659.t1 | AT1G57770 | 30.970 | 536 | 326 | 18 | 80 | 586 | 54 | 574 | 2.55e-59 | 208 |
| MS.gene034659.t1 | AT5G49555 | 22.655 | 565 | 341 | 20 | 79 | 572 | 14 | 553 | 3.03e-15 | 79.3 |
Find 155 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATTGGTGGGTTGGTTGC+TGG | 0.163402 | 1.3:+40225528 | MS.gene034659:CDS |
| TCTGGTAGCATTTGATATTA+TGG | 0.166724 | 1.3:-40228815 | None:intergenic |
| AGTGGGAAGAGAGGGGATTT+TGG | 0.203079 | 1.3:+40225474 | MS.gene034659:CDS |
| ATTTCAGCTCCAACGAATTC+AGG | 0.213778 | 1.3:-40226882 | None:intergenic |
| GTTATACCTGGTGGGAGTTC+TGG | 0.230676 | 1.3:+40225600 | MS.gene034659:CDS |
| GATGCAATTGTTATTGGTTC+TGG | 0.233123 | 1.3:+40225507 | MS.gene034659:CDS |
| TGGAAGTTCTCTTCCTCTTT+TGG | 0.245609 | 1.3:-40228996 | None:intergenic |
| AGCATTTGATATTATGGTTT+TGG | 0.254832 | 1.3:-40228809 | None:intergenic |
| CTGCTTCTTTGCCTCATATT+CGG | 0.301743 | 1.3:-40229535 | None:intergenic |
| GTGGGATTAACTACCCTCTT+GGG | 0.310382 | 1.3:+40228554 | MS.gene034659:CDS |
| GGGTTTGATGCAATTGTTAT+TGG | 0.311684 | 1.3:+40225501 | MS.gene034659:CDS |
| GGCATGCTGCTTGGGTTGCT+TGG | 0.312524 | 1.3:+40230569 | MS.gene034659:CDS |
| TATATTCACAACTTCTTCAA+TGG | 0.321714 | 1.3:+40229311 | MS.gene034659:CDS |
| GGTTAGATACGTAGAGTATA+GGG | 0.324589 | 1.3:-40225281 | None:intergenic |
| TGGTTCTGGGATTGGTGGGT+TGG | 0.329510 | 1.3:+40225521 | MS.gene034659:CDS |
| GGATTGGTGGGTTGGTTGCT+GGG | 0.332135 | 1.3:+40225529 | MS.gene034659:CDS |
| CCTCTTGAATGCTTGACATT+AGG | 0.345892 | 1.3:+40226949 | MS.gene034659:CDS |
| CTTGTAGGAAAGCTTGTAAA+AGG | 0.347722 | 1.3:+40228963 | MS.gene034659:intron |
| GCCCGTGACGAGGGTACTTA+TGG | 0.350068 | 1.3:+40229894 | MS.gene034659:CDS |
| CTGAGAGGTGGTTTGGTAGA+TGG | 0.352687 | 1.3:-40226646 | None:intergenic |
| CAAATGGTGGTAGAAGAAAA+AGG | 0.352783 | 1.3:+40225400 | MS.gene034659:CDS |
| TGTGAAAGGTGCTAGAGTTT+TGG | 0.359350 | 1.3:+40225563 | MS.gene034659:CDS |
| GTGGATCCTGAATATACTTC+CGG | 0.362723 | 1.3:-40227744 | None:intergenic |
| CTAGAACAATTGGACCAGTT+TGG | 0.364549 | 1.3:+40229206 | MS.gene034659:intron |
| TGCTGCTTGGGTTGCTTGGT+TGG | 0.365552 | 1.3:+40230573 | MS.gene034659:CDS |
| TGGTTAGATACGTAGAGTAT+AGG | 0.371349 | 1.3:-40225282 | None:intergenic |
| CATCGAGTAGCTGCAGATAT+TGG | 0.371399 | 1.3:+40230168 | MS.gene034659:CDS |
| TGTAACTTATCTAGAACAAT+TGG | 0.374477 | 1.3:+40229196 | MS.gene034659:intron |
| GGCAAAAGGTCTAGTTGATC+AGG | 0.375101 | 1.3:+40228603 | MS.gene034659:CDS |
| AAACTTACTGTTGTGTTAAA+CGG | 0.378010 | 1.3:-40229957 | None:intergenic |
| GGGTGTGATGGTAGATGATG+GGG | 0.379033 | 1.3:-40225308 | None:intergenic |
| GTTATTGCTGTAGCTTTCTC+AGG | 0.379480 | 1.3:+40230132 | MS.gene034659:CDS |
| GTTGGTTCTTCTGTTATGTT+TGG | 0.379751 | 1.3:+40225654 | MS.gene034659:CDS |
| ATGCAATTGTTATTGGTTCT+GGG | 0.385977 | 1.3:+40225508 | MS.gene034659:CDS |
| AAGTATCGTCGATGTGTCTT+AGG | 0.386513 | 1.3:-40229870 | None:intergenic |
| AGCATTCCAAAGGGGTTGTT+AGG | 0.391726 | 1.3:+40229930 | MS.gene034659:CDS |
| GGTAAAGATTGAAACTTTGT+AGG | 0.393664 | 1.3:-40225333 | None:intergenic |
| TTAGAGAAGAAATTGTTTCC+AGG | 0.395116 | 1.3:+40229585 | MS.gene034659:CDS |
| TGAAGGATATGACGACCTTC+AGG | 0.399654 | 1.3:-40229288 | None:intergenic |
| ATTGTTATTGGTTCTGGGAT+TGG | 0.405554 | 1.3:+40225513 | MS.gene034659:CDS |
| ATTTCTTCTCTAATCTGCTT+AGG | 0.405930 | 1.3:-40229575 | None:intergenic |
| GTTGGAGACAGTTGCTTCCC+TGG | 0.408956 | 1.3:+40230102 | MS.gene034659:CDS |
| AGCATTCACCGTAGAATTTG+AGG | 0.410752 | 1.3:-40226742 | None:intergenic |
| GGCATTCCTAACAACCCCTT+TGG | 0.415481 | 1.3:-40229936 | None:intergenic |
| GTGGTTGAAAGTGGGAAGAG+AGG | 0.417093 | 1.3:+40225465 | MS.gene034659:CDS |
| TCCATATGGTTCCTCCAAAC+TGG | 0.419387 | 1.3:-40229220 | None:intergenic |
| TATTATTTGCCTCAAAATGC+TGG | 0.423282 | 1.3:+40227712 | MS.gene034659:CDS |
| TTTGGAATGCTGCGTGGCAT+TGG | 0.424414 | 1.3:-40229918 | None:intergenic |
| AAATGATGACAATCTGTATC+TGG | 0.425094 | 1.3:-40229086 | None:intergenic |
| TATGTTTGGTTTCAGTGATA+AGG | 0.426067 | 1.3:+40225668 | MS.gene034659:CDS |
| GCTACCAGATGGGACACATT+TGG | 0.431536 | 1.3:+40228829 | MS.gene034659:CDS |
| TTATTGGTTCTGGGATTGGT+GGG | 0.433967 | 1.3:+40225517 | MS.gene034659:CDS |
| TCATATGGGTCATGCTCAAA+TGG | 0.439206 | 1.3:+40225384 | MS.gene034659:CDS |
| TGGATCCTGAATATACTTCC+GGG | 0.441071 | 1.3:-40227743 | None:intergenic |
| CATAGCCCGGAAGTATATTC+AGG | 0.441329 | 1.3:+40227738 | MS.gene034659:CDS |
| AAATGAACGGTTGTCGGATC+AGG | 0.442725 | 1.3:-40226623 | None:intergenic |
| ACTTGCTTTCAGAGCATAGA+TGG | 0.443465 | 1.3:+40230069 | MS.gene034659:intron |
| TGGTTGAAAGTGGGAAGAGA+GGG | 0.443857 | 1.3:+40225466 | MS.gene034659:CDS |
| CTAACCAAATGTGTCCCATC+TGG | 0.445008 | 1.3:-40228833 | None:intergenic |
| GGGGTGTGATGGTAGATGAT+GGG | 0.445186 | 1.3:-40225309 | None:intergenic |
| GGTGGGATTAACTACCCTCT+TGG | 0.447475 | 1.3:+40228553 | MS.gene034659:CDS |
| AGCAGCATGCCATCCAAAAC+AGG | 0.450495 | 1.3:-40230557 | None:intergenic |
| TTCTTCAATGGACGATTGGC+AGG | 0.456294 | 1.3:+40229323 | MS.gene034659:CDS |
| ACCAGTTTGGAGGAACCATA+TGG | 0.456800 | 1.3:+40229219 | MS.gene034659:CDS |
| GAGTTACTTTCCCCACGAAA+AGG | 0.467163 | 1.3:+40226712 | MS.gene034659:CDS |
| TGGAGTCTGCAAAGCGTTGA+CGG | 0.473220 | 1.3:-40227980 | None:intergenic |
| AAGATTGAAACTTTGTAGGT+GGG | 0.478712 | 1.3:-40225329 | None:intergenic |
| ACCATGCTAGCATTAATCAT+TGG | 0.478809 | 1.3:-40228000 | None:intergenic |
| CTGAATATACTTCCGGGCTA+TGG | 0.480567 | 1.3:-40227737 | None:intergenic |
| CATTGGAAGCAGTTGGTTGT+CGG | 0.481504 | 1.3:+40226588 | MS.gene034659:CDS |
| TGGGATTAACTACCCTCTTG+GGG | 0.481634 | 1.3:+40228555 | MS.gene034659:CDS |
| CAATTTGATAACACAAGCAT+TGG | 0.488575 | 1.3:+40226571 | MS.gene034659:CDS |
| TGGGGTGTGATGGTAGATGA+TGG | 0.491055 | 1.3:-40225310 | None:intergenic |
| AGCAGTTGGTTGTCGGATGC+AGG | 0.491593 | 1.3:+40226595 | MS.gene034659:CDS |
| GTTATTGGTTCTGGGATTGG+TGG | 0.492595 | 1.3:+40225516 | MS.gene034659:CDS |
| CACGAGTATTATCACCGAGC+AGG | 0.494330 | 1.3:+40228654 | MS.gene034659:CDS |
| CAACTTCTTCAATGGACGAT+TGG | 0.495431 | 1.3:+40229319 | MS.gene034659:CDS |
| AAAATGCTGGAGCCATAGCC+CGG | 0.498070 | 1.3:+40227725 | MS.gene034659:CDS |
| TCAAATTCTACGGTGAATGC+TGG | 0.498661 | 1.3:+40226744 | MS.gene034659:CDS |
| ATGTGTATTGAAAGAAAAGA+TGG | 0.502132 | 1.3:-40229038 | None:intergenic |
| GGGACTCAGTTGGCTGTGAA+AGG | 0.502136 | 1.3:+40225549 | MS.gene034659:CDS |
| TCGATGGATGCTCGAAGACC+TGG | 0.502515 | 1.3:-40229603 | None:intergenic |
| TCTTTACCTTCATGTAGCTA+TGG | 0.503305 | 1.3:+40225348 | MS.gene034659:CDS |
| TTTCAATGCCCTGAATTCGT+TGG | 0.504784 | 1.3:+40226873 | MS.gene034659:CDS |
| ATTGCAAAGTCCTTGGCAAA+AGG | 0.507882 | 1.3:+40228589 | MS.gene034659:CDS |
| AAAGATTGAAACTTTGTAGG+TGG | 0.509708 | 1.3:-40225330 | None:intergenic |
| AGGAGAATCACTACCAAAAG+AGG | 0.509808 | 1.3:+40228983 | MS.gene034659:CDS |
| CGAATATGAGGCAAAGAAGC+AGG | 0.510443 | 1.3:+40229536 | MS.gene034659:CDS |
| TTTCAGCTCCAACGAATTCA+GGG | 0.512472 | 1.3:-40226881 | None:intergenic |
| AGGGTGGTGGTGAAAGTGAA+AGG | 0.516101 | 1.3:+40225420 | MS.gene034659:CDS |
| ACTCGAACTGAGAGGTGGTT+TGG | 0.517725 | 1.3:-40226653 | None:intergenic |
| GTTGGTTGCTGGGACTCAGT+TGG | 0.518251 | 1.3:+40225539 | MS.gene034659:CDS |
| CTTTACCTCTATAAAATCGA+TGG | 0.518459 | 1.3:-40229619 | None:intergenic |
| AGATGGAAATGAACGGTTGT+CGG | 0.520217 | 1.3:-40226629 | None:intergenic |
| ACTTACGGCTTTGCCCTGCT+CGG | 0.522769 | 1.3:-40228668 | None:intergenic |
| GAACAATTGGACCAGTTTGG+AGG | 0.525975 | 1.3:+40229209 | MS.gene034659:intron |
| GCTTGGTTGGTTAAGAACAC+TGG | 0.526189 | 1.3:+40230586 | MS.gene034659:CDS |
| ACTTTGTAGGTGGGGTGTGA+TGG | 0.526748 | 1.3:-40225320 | None:intergenic |
| TCTCTCAAGAACCGAATATG+AGG | 0.528750 | 1.3:+40229524 | MS.gene034659:CDS |
| ATGCCACGCAGCATTCCAAA+GGG | 0.532817 | 1.3:+40229921 | MS.gene034659:CDS |
| ATAGATGGTCTTTACTGTGT+TGG | 0.534434 | 1.3:+40230084 | MS.gene034659:CDS |
| GACAGTTGCTTCCCTGGACA+AGG | 0.535454 | 1.3:+40230108 | MS.gene034659:CDS |
| TGTGTGACAGACACTTTGGT+GGG | 0.539652 | 1.3:+40228536 | MS.gene034659:CDS |
| AAGAAGTTGTGAATATATGA+AGG | 0.541078 | 1.3:-40229305 | None:intergenic |
| ACAGCAATAACACCTTGTCC+AGG | 0.542134 | 1.3:-40230120 | None:intergenic |
| GTCCATAAGTACCCTCGTCA+CGG | 0.543450 | 1.3:-40229896 | None:intergenic |
| TTGGAGAAGTATGTTATACC+TGG | 0.544910 | 1.3:+40225588 | MS.gene034659:CDS |
| TCCAATGATTAATGCTAGCA+TGG | 0.556512 | 1.3:+40227999 | MS.gene034659:CDS |
| TAATATCAAATGCTACCAGA+TGG | 0.556998 | 1.3:+40228818 | MS.gene034659:CDS |
| AGATTGAAACTTTGTAGGTG+GGG | 0.558184 | 1.3:-40225328 | None:intergenic |
| GACGGCATCCTCAAATTCTA+CGG | 0.562130 | 1.3:+40226734 | MS.gene034659:CDS |
| ACACAAGCATTGGAAGCAGT+TGG | 0.564007 | 1.3:+40226581 | MS.gene034659:CDS |
| GATGAAGAAGTGGTTGAAAG+TGG | 0.574995 | 1.3:+40225456 | MS.gene034659:CDS |
| TGGTGGGATTGCAAAGTCCT+TGG | 0.575419 | 1.3:+40228582 | MS.gene034659:CDS |
| GGTTGAAAGTGGGAAGAGAG+GGG | 0.577058 | 1.3:+40225467 | MS.gene034659:CDS |
| TCCATAAGTACCCTCGTCAC+GGG | 0.581708 | 1.3:-40229895 | None:intergenic |
| AGTGAAAGGGATGATGAAAG+TGG | 0.581837 | 1.3:+40225434 | MS.gene034659:CDS |
| GTTCTGTGTGACAGACACTT+TGG | 0.585250 | 1.3:+40228532 | MS.gene034659:CDS |
| GGGTGGTGGTGAAAGTGAAA+GGG | 0.585589 | 1.3:+40225421 | MS.gene034659:CDS |
| AATGATGAATCAAGTATAGT+CGG | 0.590388 | 1.3:-40229261 | None:intergenic |
| AATATCAAATGCTACCAGAT+GGG | 0.590576 | 1.3:+40228819 | MS.gene034659:CDS |
| GTTGTCTTTCATAGATGCTG+AGG | 0.591209 | 1.3:+40227771 | MS.gene034659:CDS |
| AATGCCACGCAGCATTCCAA+AGG | 0.592149 | 1.3:+40229920 | MS.gene034659:CDS |
| GATTCATCATTAGCTCCTGA+AGG | 0.593456 | 1.3:+40229273 | MS.gene034659:CDS |
| GCTCTTCCATAGCTACATGA+AGG | 0.593801 | 1.3:-40225354 | None:intergenic |
| CTGTGTGACAGACACTTTGG+TGG | 0.593994 | 1.3:+40228535 | MS.gene034659:CDS |
| TACTTTCCCCACGAAAAGGA+CGG | 0.594585 | 1.3:+40226716 | MS.gene034659:CDS |
| ACGAGTATTATCACCGAGCA+GGG | 0.595181 | 1.3:+40228655 | MS.gene034659:CDS |
| GATGAAAGTGGATGAAGAAG+TGG | 0.597887 | 1.3:+40225446 | MS.gene034659:CDS |
| CCTAATGTCAAGCATTCAAG+AGG | 0.600419 | 1.3:-40226949 | None:intergenic |
| GTTAGATACGTAGAGTATAG+GGG | 0.602975 | 1.3:-40225280 | None:intergenic |
| TAAAAGCCAGAACTCCCACC+AGG | 0.605161 | 1.3:-40225606 | None:intergenic |
| ATTCTACGGTGAATGCTGGA+AGG | 0.608327 | 1.3:+40226748 | MS.gene034659:CDS |
| GTTGGAGCTGAAATCGCTTG+AGG | 0.608624 | 1.3:+40226891 | MS.gene034659:CDS |
| GGTGTGATGGTAGATGATGG+GGG | 0.615243 | 1.3:-40225307 | None:intergenic |
| GGGATTAACTACCCTCTTGG+GGG | 0.619406 | 1.3:+40228556 | MS.gene034659:CDS |
| AGAAGTATGTTATACCTGGT+GGG | 0.622034 | 1.3:+40225592 | MS.gene034659:CDS |
| GGGTAGTCAGATACTTTACA+AGG | 0.622656 | 1.3:+40228624 | MS.gene034659:CDS |
| GCAAAAGGTCTAGTTGATCA+GGG | 0.623548 | 1.3:+40228604 | MS.gene034659:CDS |
| GAGAAGTATGTTATACCTGG+TGG | 0.625923 | 1.3:+40225591 | MS.gene034659:CDS |
| CAGCAATAACACCTTGTCCA+GGG | 0.633374 | 1.3:-40230119 | None:intergenic |
| GTAGGAGTGAGGCTTTCAGA+CGG | 0.637138 | 1.3:+40228772 | MS.gene034659:CDS |
| GAGTATAGGGGAATTGAGCA+TGG | 0.637900 | 1.3:-40225268 | None:intergenic |
| ATGAAGAAGTGGTTGAAAGT+GGG | 0.641554 | 1.3:+40225457 | MS.gene034659:CDS |
| TGTGCACTCGAACTGAGAGG+TGG | 0.648501 | 1.3:-40226658 | None:intergenic |
| ACGATACTTAGCCCGTGACG+AGG | 0.654000 | 1.3:+40229884 | MS.gene034659:CDS |
| CTCTGTGCACTCGAACTGAG+AGG | 0.658093 | 1.3:-40226661 | None:intergenic |
| CGATACTTAGCCCGTGACGA+GGG | 0.667190 | 1.3:+40229885 | MS.gene034659:CDS |
| TATGGGTCATGCTCAAATGG+TGG | 0.673522 | 1.3:+40225387 | MS.gene034659:CDS |
| AACCCCTTTGGAATGCTGCG+TGG | 0.680893 | 1.3:-40229924 | None:intergenic |
| TCTATGAAAGACAACAACTG+TGG | 0.692035 | 1.3:-40227763 | None:intergenic |
| GTTTGGTAGATGGAAATGAA+CGG | 0.693676 | 1.3:-40226636 | None:intergenic |
| TGATGACAATCTGTATCTGG+TGG | 0.706460 | 1.3:-40229083 | None:intergenic |
| ATATGAGGCAAAGAAGCAGG+TGG | 0.709650 | 1.3:+40229539 | MS.gene034659:CDS |
| TGCCACGCAGCATTCCAAAG+GGG | 0.750458 | 1.3:+40229922 | MS.gene034659:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATTATTAAAAAAT+AGG | + | chr1.3:40230518-40230537 | MS.gene034659:intron | 0.0% |
| !!! | TTTTTTATTATTAAAAAATA+GGG | + | chr1.3:40230519-40230538 | MS.gene034659:intron | 0.0% |
| !! | AAAAAAATGAATTAAAAAAG+CGG | - | chr1.3:40226823-40226842 | None:intergenic | 10.0% |
| !! | TGAAAATATAATGTTAAAAT+AGG | - | chr1.3:40227645-40227664 | None:intergenic | 10.0% |
| !!! | TTTAACATTATATTTTCATA+TGG | + | chr1.3:40227647-40227666 | MS.gene034659:intron | 10.0% |
| !! | AAATATAATGTTAAAATAGG+AGG | - | chr1.3:40227642-40227661 | None:intergenic | 15.0% |
| !! | AATATAATGTTAAAATAGGA+GGG | - | chr1.3:40227641-40227660 | None:intergenic | 15.0% |
| !! | TAATATAATAAACAAAAGCA+CGG | - | chr1.3:40230406-40230425 | None:intergenic | 15.0% |
| !! | TATATTATGAAAAGATAATG+TGG | - | chr1.3:40227865-40227884 | None:intergenic | 15.0% |
| !! | TTATTATTAAAAAATAGGGT+TGG | + | chr1.3:40230523-40230542 | MS.gene034659:intron | 15.0% |
| !!! | AAAAATATTTTAACAACGTA+CGG | - | chr1.3:40229688-40229707 | None:intergenic | 15.0% |
| !!! | AAATGTATTTATCTTTTTCA+CGG | + | chr1.3:40226347-40226366 | MS.gene034659:intron | 15.0% |
| !!! | AGATTTCAACTTTATTTTAT+TGG | - | chr1.3:40229372-40229391 | None:intergenic | 15.0% |
| !!! | ATTTGTTTATTTTGAATATG+AGG | + | chr1.3:40226986-40227005 | MS.gene034659:intron | 15.0% |
| !! | AAAAAAGATGCAACATAATT+AGG | + | chr1.3:40227464-40227483 | MS.gene034659:intron | 20.0% |
| !! | AATTAATCAAATAAAGAAGC+AGG | - | chr1.3:40228502-40228521 | None:intergenic | 20.0% |
| !! | ACACATAAATAATCAAGATT+TGG | - | chr1.3:40229798-40229817 | None:intergenic | 20.0% |
| !! | ATATAATGTTAAAATAGGAG+GGG | - | chr1.3:40227640-40227659 | None:intergenic | 20.0% |
| !! | ATTACAAATTATGTCTTCTA+GGG | - | chr1.3:40229734-40229753 | None:intergenic | 20.0% |
| !! | ATTATGAGATTTACATGTAT+TGG | - | chr1.3:40229473-40229492 | None:intergenic | 20.0% |
| !! | CAAAAGATCGTATATAATAA+TGG | - | chr1.3:40228291-40228310 | None:intergenic | 20.0% |
| !! | CTATATAGAATTATAAGTTG+AGG | - | chr1.3:40229136-40229155 | None:intergenic | 20.0% |
| !! | GATGTAATTGAAAATTTGAA+AGG | + | chr1.3:40227510-40227529 | MS.gene034659:intron | 20.0% |
| !! | GATTGAAATATACATATTGA+AGG | - | chr1.3:40227120-40227139 | None:intergenic | 20.0% |
| !! | TAAAATAATGATTCAATGAC+AGG | + | chr1.3:40229984-40230003 | MS.gene034659:intron | 20.0% |
| !! | TATTACAAATTATGTCTTCT+AGG | - | chr1.3:40229735-40229754 | None:intergenic | 20.0% |
| !! | TATTGGCAAATGAATAAAAT+AGG | - | chr1.3:40229456-40229475 | None:intergenic | 20.0% |
| !! | TCAGAAAATTATTCACAAAT+TGG | - | chr1.3:40227035-40227054 | None:intergenic | 20.0% |
| !! | TCATTATTGTTTATGTTGAA+TGG | + | chr1.3:40226488-40226507 | MS.gene034659:intron | 20.0% |
| !! | TTAAAAGTTTACATTTGTGA+TGG | + | chr1.3:40226844-40226863 | MS.gene034659:intron | 20.0% |
| !!! | ACTGTTTTCATATAAGTTAT+AGG | - | chr1.3:40226113-40226132 | None:intergenic | 20.0% |
| !!! | ATAAGGTTTACCTATTTTTA+TGG | + | chr1.3:40227822-40227841 | MS.gene034659:intron | 20.0% |
| !!! | ATTCTATTTTGTAATCTGAT+AGG | - | chr1.3:40228696-40228715 | None:intergenic | 20.0% |
| !!! | CATTATATTTTCATATGGTT+TGG | + | chr1.3:40227652-40227671 | MS.gene034659:intron | 20.0% |
| !!! | CATTATTATATACGATCTTT+TGG | + | chr1.3:40228289-40228308 | MS.gene034659:intron | 20.0% |
| !!! | TCATTTAATATTTGCCTTTT+TGG | + | chr1.3:40230292-40230311 | MS.gene034659:intron | 20.0% |
| ! | AAAATGAATTAAAAAAGCGG+AGG | - | chr1.3:40226820-40226839 | None:intergenic | 25.0% |
| ! | AAACTTACTGTTGTGTTAAA+CGG | - | chr1.3:40229960-40229979 | None:intergenic | 25.0% |
| ! | AAAGTACAGTAAAAAGAATG+AGG | - | chr1.3:40229658-40229677 | None:intergenic | 25.0% |
| ! | AAGAAGTTGTGAATATATGA+AGG | - | chr1.3:40229308-40229327 | None:intergenic | 25.0% |
| ! | AAGGTAACATTATGTAATTC+GGG | - | chr1.3:40228946-40228965 | None:intergenic | 25.0% |
| ! | AATCAATGTGATTCTATACT+TGG | - | chr1.3:40227319-40227338 | None:intergenic | 25.0% |
| ! | ACAAAATAGAATGACATGTT+TGG | + | chr1.3:40228704-40228723 | MS.gene034659:intron | 25.0% |
| ! | AGTTATTCAATTCAGTCATA+AGG | + | chr1.3:40227805-40227824 | MS.gene034659:intron | 25.0% |
| ! | ATCAATGTGATTCTATACTT+GGG | - | chr1.3:40227318-40227337 | None:intergenic | 25.0% |
| ! | ATGAAAAAAAGCAAAAAGCT+AGG | - | chr1.3:40228036-40228055 | None:intergenic | 25.0% |
| ! | ATGTACCTTAAATTTGTGTA+GGG | + | chr1.3:40226542-40226561 | MS.gene034659:intron | 25.0% |
| ! | ATGTGTATTGAAAGAAAAGA+TGG | - | chr1.3:40229041-40229060 | None:intergenic | 25.0% |
| ! | ATTACATAATGTTACCTTGT+AGG | + | chr1.3:40228948-40228967 | MS.gene034659:intron | 25.0% |
| ! | CAAGGTAACATTATGTAATT+CGG | - | chr1.3:40228947-40228966 | None:intergenic | 25.0% |
| ! | TATATTCACAACTTCTTCAA+TGG | + | chr1.3:40229311-40229330 | MS.gene034659:CDS | 25.0% |
| ! | TCAACACTTTCCATAAAAAT+AGG | - | chr1.3:40227835-40227854 | None:intergenic | 25.0% |
| ! | TTATTCACAAATTGGAGTTT+AGG | - | chr1.3:40227027-40227046 | None:intergenic | 25.0% |
| ! | TTTCTTAACTTACTTCTCAT+AGG | - | chr1.3:40226311-40226330 | None:intergenic | 25.0% |
| ! | TTTGTGTCTCAGAATTTATA+TGG | + | chr1.3:40227216-40227235 | MS.gene034659:intron | 25.0% |
| !! | AGATCGTATATAATAATGGA+AGG | - | chr1.3:40228287-40228306 | None:intergenic | 25.0% |
| !! | AGCATTTGATATTATGGTTT+TGG | - | chr1.3:40228812-40228831 | None:intergenic | 25.0% |
| !! | ATCTTTTCTTTCAATACACA+TGG | + | chr1.3:40229040-40229059 | MS.gene034659:CDS | 25.0% |
| !! | ATTTGATTAATTTTGTCTCC+AGG | + | chr1.3:40228510-40228529 | MS.gene034659:intron | 25.0% |
| !! | TAACACTTGTGATTTTGTTA+GGG | + | chr1.3:40226000-40226019 | MS.gene034659:intron | 25.0% |
| !! | TCTAAGATAGCTTATGAAAA+CGG | + | chr1.3:40225807-40225826 | MS.gene034659:intron | 25.0% |
| !! | TCTTTTCTTTCAATACACAT+GGG | + | chr1.3:40229041-40229060 | MS.gene034659:CDS | 25.0% |
| !! | TGTAACTTATCTAGAACAAT+TGG | + | chr1.3:40229196-40229215 | MS.gene034659:intron | 25.0% |
| !! | TTAACACTTGTGATTTTGTT+AGG | + | chr1.3:40225999-40226018 | MS.gene034659:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1.3:40225930-40225949 | MS.gene034659:intron | 25.0% |
| !!! | ATGTTCTTGTTTTCTGTTTT+AGG | + | chr1.3:40229500-40229519 | MS.gene034659:intron | 25.0% |
| !!! | GAAAGTTGCTAGTTTTAAAT+TGG | + | chr1.3:40227355-40227374 | MS.gene034659:intron | 25.0% |
| !!! | GAGCTTTAACATAAACTTTT+TGG | - | chr1.3:40229019-40229038 | None:intergenic | 25.0% |
| !!! | TGTTCTTGTTTTCTGTTTTA+GGG | + | chr1.3:40229501-40229520 | MS.gene034659:intron | 25.0% |
| AAAGATTGAAACTTTGTAGG+TGG | - | chr1.3:40225333-40225352 | None:intergenic | 30.0% | |
| AAATGATGACAATCTGTATC+TGG | - | chr1.3:40229089-40229108 | None:intergenic | 30.0% | |
| AAATGGTGGTAGAAGAAAAA+GGG | + | chr1.3:40225401-40225420 | MS.gene034659:CDS | 30.0% | |
| AAGATTGAAACTTTGTAGGT+GGG | - | chr1.3:40225332-40225351 | None:intergenic | 30.0% | |
| AATATCAAATGCTACCAGAT+GGG | + | chr1.3:40228819-40228838 | MS.gene034659:CDS | 30.0% | |
| AGAGTTCAATGTTATAGTGA+AGG | + | chr1.3:40225745-40225764 | MS.gene034659:intron | 30.0% | |
| AGTTAAGAAACCAAGAACAA+AGG | + | chr1.3:40226321-40226340 | MS.gene034659:intron | 30.0% | |
| ATAAGCTAGAAAACAACTGA+TGG | - | chr1.3:40226055-40226074 | None:intergenic | 30.0% | |
| ATGAATGAAAATTACCAAGC+AGG | - | chr1.3:40227923-40227942 | None:intergenic | 30.0% | |
| ATTTCTTCTCTAATCTGCTT+AGG | - | chr1.3:40229578-40229597 | None:intergenic | 30.0% | |
| CATGTACCTTAAATTTGTGT+AGG | + | chr1.3:40226541-40226560 | MS.gene034659:intron | 30.0% | |
| CGCTAATATCATAAGTACTT+AGG | - | chr1.3:40226156-40226175 | None:intergenic | 30.0% | |
| CGCTATAAATATGTCCAAAA+AGG | - | chr1.3:40230309-40230328 | None:intergenic | 30.0% | |
| CGGGATTAACAAATTAATGA+AGG | - | chr1.3:40228927-40228946 | None:intergenic | 30.0% | |
| CTCAAAAAGATACTTCCATA+TGG | - | chr1.3:40229237-40229256 | None:intergenic | 30.0% | |
| CTTATATCTATAAGTTCTCC+GGG | + | chr1.3:40226070-40226089 | MS.gene034659:intron | 30.0% | |
| CTTTACCTCTATAAAATCGA+TGG | - | chr1.3:40229622-40229641 | None:intergenic | 30.0% | |
| GACAAAAAAGATTACAGTGT+TGG | - | chr1.3:40228196-40228215 | None:intergenic | 30.0% | |
| GATTACCCTACACAAATTTA+AGG | - | chr1.3:40226550-40226569 | None:intergenic | 30.0% | |
| GCTTATATCTATAAGTTCTC+CGG | + | chr1.3:40226069-40226088 | MS.gene034659:intron | 30.0% | |
| GGTAAAGATTGAAACTTTGT+AGG | - | chr1.3:40225336-40225355 | None:intergenic | 30.0% | |
| TAATATCAAATGCTACCAGA+TGG | + | chr1.3:40228818-40228837 | MS.gene034659:CDS | 30.0% | |
| TATTATTTGCCTCAAAATGC+TGG | + | chr1.3:40227712-40227731 | MS.gene034659:CDS | 30.0% | |
| TATTGTGCTTATGCATTAGT+AGG | - | chr1.3:40226203-40226222 | None:intergenic | 30.0% | |
| TCATTCGTTCAAAGTTATCA+AGG | - | chr1.3:40229159-40229178 | None:intergenic | 30.0% | |
| TCTGGTAGCATTTGATATTA+TGG | - | chr1.3:40228818-40228837 | None:intergenic | 30.0% | |
| TGAATGAAAATTACCAAGCA+GGG | - | chr1.3:40227922-40227941 | None:intergenic | 30.0% | |
| TGGCAAATGAATAAAATAGG+AGG | - | chr1.3:40229453-40229472 | None:intergenic | 30.0% | |
| TTACTGAACATCATTACTCT+TGG | + | chr1.3:40227187-40227206 | MS.gene034659:intron | 30.0% | |
| TTAGAGAAGAAATTGTTTCC+AGG | + | chr1.3:40229585-40229604 | MS.gene034659:CDS | 30.0% | |
| TTTCATTCATAAAAGCTCTG+TGG | + | chr1.3:40227933-40227952 | MS.gene034659:intron | 30.0% | |
| ! | AATCACATTGATTGAATCAC+GGG | + | chr1.3:40227326-40227345 | MS.gene034659:intron | 30.0% |
| ! | ATTTTGAATATGAGGCTACA+AGG | + | chr1.3:40226994-40227013 | MS.gene034659:intron | 30.0% |
| ! | CAACATAATTAGGAGTATGT+TGG | + | chr1.3:40227474-40227493 | MS.gene034659:intron | 30.0% |
| ! | CAATTTGATAACACAAGCAT+TGG | + | chr1.3:40226571-40226590 | MS.gene034659:CDS | 30.0% |
| ! | CGTATATAATAATGGAAGGA+TGG | - | chr1.3:40228283-40228302 | None:intergenic | 30.0% |
| ! | CTACACAAATTTAAGGTACA+TGG | - | chr1.3:40226543-40226562 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCAATACACATG+GGG | + | chr1.3:40229042-40229061 | MS.gene034659:CDS | 30.0% |
| ! | GAAGAGCTGAATTTTCATAT+GGG | + | chr1.3:40225370-40225389 | MS.gene034659:CDS | 30.0% |
| ! | GAATCACATTGATTGAATCA+CGG | + | chr1.3:40227325-40227344 | MS.gene034659:intron | 30.0% |
| ! | GATTTGTACTATACTTTTGC+AGG | + | chr1.3:40228750-40228769 | MS.gene034659:intron | 30.0% |
| ! | GTTTTATAAGTTTACCCTTC+AGG | + | chr1.3:40227393-40227412 | MS.gene034659:intron | 30.0% |
| ! | TACATTTTCACCTTTGTTCT+TGG | - | chr1.3:40226334-40226353 | None:intergenic | 30.0% |
| ! | TATGTTTGGTTTCAGTGATA+AGG | + | chr1.3:40225668-40225687 | MS.gene034659:CDS | 30.0% |
| ! | TGAAAGGAGTCTTATAGAAA+GGG | + | chr1.3:40227526-40227545 | MS.gene034659:intron | 30.0% |
| ! | TTGAAAGGAGTCTTATAGAA+AGG | + | chr1.3:40227525-40227544 | MS.gene034659:intron | 30.0% |
| ! | TTTATCCAAACATGGCTTTA+AGG | + | chr1.3:40225938-40225957 | MS.gene034659:intron | 30.0% |
| ! | TTTTCTTTCAATACACATGG+GGG | + | chr1.3:40229043-40229062 | MS.gene034659:CDS | 30.0% |
| !! | ACCAATTCTAAAGTGACATA+AGG | + | chr1.3:40228339-40228358 | MS.gene034659:intron | 30.0% |
| !! | ATGCAATTGTTATTGGTTCT+GGG | + | chr1.3:40225508-40225527 | MS.gene034659:CDS | 30.0% |
| !! | TCCTTATGTCACTTTAGAAT+TGG | - | chr1.3:40228343-40228362 | None:intergenic | 30.0% |
| !! | TTGTACTTTTCAAAGTGTCT+AGG | + | chr1.3:40228073-40228092 | MS.gene034659:intron | 30.0% |
| !! | TTTTATTGGTTACCACTACT+CGG | - | chr1.3:40229358-40229377 | None:intergenic | 30.0% |
| !!! | AGCATTTTGAGGCAAATAAT+AGG | - | chr1.3:40227713-40227732 | None:intergenic | 30.0% |
| AAACTCATTCTCTTTCCTGA+AGG | - | chr1.3:40227411-40227430 | None:intergenic | 35.0% | |
| AACCTTAGTCAATAGTAGCT+TGG | + | chr1.3:40226453-40226472 | MS.gene034659:intron | 35.0% | |
| AACTCATTCTCTTTCCTGAA+GGG | - | chr1.3:40227410-40227429 | None:intergenic | 35.0% | |
| AAGTCATACAAGCACACAAA+AGG | - | chr1.3:40229399-40229418 | None:intergenic | 35.0% | |
| AATGAAGGAAGACAAGATCA+GGG | - | chr1.3:40228912-40228931 | None:intergenic | 35.0% | |
| AATGTTAAAATAGGAGGGGT+GGG | - | chr1.3:40227636-40227655 | None:intergenic | 35.0% | |
| ACCATGCTAGCATTAATCAT+TGG | - | chr1.3:40228003-40228022 | None:intergenic | 35.0% | |
| ACCTTAGTCAATAGTAGCTT+GGG | + | chr1.3:40226454-40226473 | MS.gene034659:intron | 35.0% | |
| ACGTCTAGTCAATACTATGA+TGG | - | chr1.3:40227440-40227459 | None:intergenic | 35.0% | |
| AGATTGAAACTTTGTAGGTG+GGG | - | chr1.3:40225331-40225350 | None:intergenic | 35.0% | |
| AGTAAAAAGAATGAGGTCAG+AGG | - | chr1.3:40229651-40229670 | None:intergenic | 35.0% | |
| ATAGATGGTCTTTACTGTGT+TGG | + | chr1.3:40230084-40230103 | MS.gene034659:CDS | 35.0% | |
| ATCCAAATGAGTTTCAACGT+GGG | + | chr1.3:40230353-40230372 | MS.gene034659:intron | 35.0% | |
| ATCTACTTCTCCCTAATGAA+AGG | + | chr1.3:40226281-40226300 | MS.gene034659:intron | 35.0% | |
| ATGAAGAAGTGGTTGAAAGT+GGG | + | chr1.3:40225457-40225476 | MS.gene034659:CDS | 35.0% | |
| CAAATGGTGGTAGAAGAAAA+AGG | + | chr1.3:40225400-40225419 | MS.gene034659:CDS | 35.0% | |
| CAGAAACCAATCTTTACCTA+AGG | - | chr1.3:40226395-40226414 | None:intergenic | 35.0% | |
| CATAGGACTTCCTTTCATTA+GGG | - | chr1.3:40226294-40226313 | None:intergenic | 35.0% | |
| CTTGTAGGAAAGCTTGTAAA+AGG | + | chr1.3:40228963-40228982 | MS.gene034659:intron | 35.0% | |
| GAATGAAAATTACCAAGCAG+GGG | - | chr1.3:40227921-40227940 | None:intergenic | 35.0% | |
| GATTCTATACTTGGGAGTTA+GGG | - | chr1.3:40227310-40227329 | None:intergenic | 35.0% | |
| GGACATATTTATAGCGTGTT+TGG | + | chr1.3:40230313-40230332 | MS.gene034659:intron | 35.0% | |
| GGGTTTGATGCAATTGTTAT+TGG | + | chr1.3:40225501-40225520 | MS.gene034659:CDS | 35.0% | |
| GGTTAGATACGTAGAGTATA+GGG | - | chr1.3:40225284-40225303 | None:intergenic | 35.0% | |
| GTAATCTGATAGGTCACTTA+CGG | - | chr1.3:40228686-40228705 | None:intergenic | 35.0% | |
| GTTAGATACGTAGAGTATAG+GGG | - | chr1.3:40225283-40225302 | None:intergenic | 35.0% | |
| GTTTCGTTCAAAATCTATCC+CGG | - | chr1.3:40226091-40226110 | None:intergenic | 35.0% | |
| GTTTGGTAGATGGAAATGAA+CGG | - | chr1.3:40226639-40226658 | None:intergenic | 35.0% | |
| TAATGAAGGAAGACAAGATC+AGG | - | chr1.3:40228913-40228932 | None:intergenic | 35.0% | |
| TAATGTTAAAATAGGAGGGG+TGG | - | chr1.3:40227637-40227656 | None:intergenic | 35.0% | |
| TACATCTTGAACAGAGCAAA+GGG | + | chr1.3:40227162-40227181 | MS.gene034659:intron | 35.0% | |
| TATTGACCAGATAGCTAGAA+TGG | + | chr1.3:40228152-40228171 | MS.gene034659:intron | 35.0% | |
| TCACAAGTGTTAATGCTAGT+AGG | - | chr1.3:40225992-40226011 | None:intergenic | 35.0% | |
| TCATAGGACTTCCTTTCATT+AGG | - | chr1.3:40226295-40226314 | None:intergenic | 35.0% | |
| TCATCCTTATAAGTCGATAC+AGG | - | chr1.3:40227249-40227268 | None:intergenic | 35.0% | |
| TCCAATGATTAATGCTAGCA+TGG | + | chr1.3:40227999-40228018 | MS.gene034659:CDS | 35.0% | |
| TCTATGAAAGACAACAACTG+TGG | - | chr1.3:40227766-40227785 | None:intergenic | 35.0% | |
| TCTGAAAAAACTGCCCAAAA+AGG | - | chr1.3:40226927-40226946 | None:intergenic | 35.0% | |
| TCTTAGTTGCAATGGATAGA+TGG | + | chr1.3:40228123-40228142 | MS.gene034659:intron | 35.0% | |
| TCTTTACCTTCATGTAGCTA+TGG | + | chr1.3:40225348-40225367 | MS.gene034659:CDS | 35.0% | |
| TGAACTAAGCAACTTGAAAC+TGG | - | chr1.3:40228454-40228473 | None:intergenic | 35.0% | |
| TGATTCTATACTTGGGAGTT+AGG | - | chr1.3:40227311-40227330 | None:intergenic | 35.0% | |
| TGGAAGGTTTGTCTTAATTG+AGG | + | chr1.3:40226764-40226783 | MS.gene034659:intron | 35.0% | |
| TGGTTAGATACGTAGAGTAT+AGG | - | chr1.3:40225285-40225304 | None:intergenic | 35.0% | |
| TTAATTAAGCTGTGTATCCC+AGG | + | chr1.3:40226177-40226196 | MS.gene034659:intron | 35.0% | |
| TTCATTGCTCTTAGTTGCAA+TGG | + | chr1.3:40228115-40228134 | MS.gene034659:intron | 35.0% | |
| TTGCAAACAGTTTACAGCTA+TGG | - | chr1.3:40230214-40230233 | None:intergenic | 35.0% | |
| ! | ACTCATTTGGATGTGGTTTT+AGG | - | chr1.3:40230345-40230364 | None:intergenic | 35.0% |
| ! | AGAAGTATGTTATACCTGGT+GGG | + | chr1.3:40225592-40225611 | MS.gene034659:CDS | 35.0% |
| ! | AGATTGTCATCATTTTGTGC+TGG | + | chr1.3:40229094-40229113 | MS.gene034659:CDS | 35.0% |
| ! | ATGCCATTGTTATTAGCTAG+TGG | + | chr1.3:40226239-40226258 | MS.gene034659:intron | 35.0% |
| ! | CTTTTACAAGCTTTCCTACA+AGG | - | chr1.3:40228965-40228984 | None:intergenic | 35.0% |
| ! | GGAAGAGCTGAATTTTCATA+TGG | + | chr1.3:40225369-40225388 | MS.gene034659:CDS | 35.0% |
| ! | GTTGGTTCTTCTGTTATGTT+TGG | + | chr1.3:40225654-40225673 | MS.gene034659:CDS | 35.0% |
| ! | TGTACTATACTTTTGCAGGT+AGG | + | chr1.3:40228754-40228773 | MS.gene034659:intron | 35.0% |
| ! | TGTCGTAGTAGCTTTACAAA+TGG | + | chr1.3:40228212-40228231 | MS.gene034659:intron | 35.0% |
| ! | TTGGAGAAGTATGTTATACC+TGG | + | chr1.3:40225588-40225607 | MS.gene034659:CDS | 35.0% |
| ! | TTTGGTTTCAGTGATAAGGT+TGG | + | chr1.3:40225672-40225691 | MS.gene034659:intron | 35.0% |
| !! | AAAAAGTCACCTGTTTTGGA+TGG | + | chr1.3:40230548-40230567 | MS.gene034659:CDS | 35.0% |
| !! | ACAACCTGTATCGACTTATA+AGG | + | chr1.3:40227242-40227261 | MS.gene034659:intron | 35.0% |
| !! | ATTGTTATTGGTTCTGGGAT+TGG | + | chr1.3:40225513-40225532 | MS.gene034659:CDS | 35.0% |
| !! | GATGCAATTGTTATTGGTTC+TGG | + | chr1.3:40225507-40225526 | MS.gene034659:CDS | 35.0% |
| !! | GCTTTAAGGTCTGTTTAGAT+TGG | + | chr1.3:40225952-40225971 | MS.gene034659:intron | 35.0% |
| !!! | AGCATCCATCGATTTTATAG+AGG | + | chr1.3:40229614-40229633 | MS.gene034659:CDS | 35.0% |
| !!! | GAGTTCTGGCTTTTATCATA+GGG | + | chr1.3:40225614-40225633 | MS.gene034659:CDS | 35.0% |
| ACAGACCTTAAAGCCATGTT+TGG | - | chr1.3:40225946-40225965 | None:intergenic | 40.0% | |
| ACTTGCTTTCAGAGCATAGA+TGG | + | chr1.3:40230069-40230088 | MS.gene034659:intron | 40.0% | |
| AGATGGAAATGAACGGTTGT+CGG | - | chr1.3:40226632-40226651 | None:intergenic | 40.0% | |
| AGCATTCACCGTAGAATTTG+AGG | - | chr1.3:40226745-40226764 | None:intergenic | 40.0% | |
| AGGAGAATCACTACCAAAAG+AGG | + | chr1.3:40228983-40229002 | MS.gene034659:CDS | 40.0% | |
| AGTGAAAGGGATGATGAAAG+TGG | + | chr1.3:40225434-40225453 | MS.gene034659:CDS | 40.0% | |
| AGTGTCTAGGAGAGAAGTTA+TGG | + | chr1.3:40228086-40228105 | MS.gene034659:intron | 40.0% | |
| AGTTAGAGTTGGGGGTTAAA+AGG | - | chr1.3:40229837-40229856 | None:intergenic | 40.0% | |
| ATGTTAAAATAGGAGGGGTG+GGG | - | chr1.3:40227635-40227654 | None:intergenic | 40.0% | |
| ATTGCAAAGTCCTTGGCAAA+AGG | + | chr1.3:40228589-40228608 | MS.gene034659:CDS | 40.0% | |
| ATTTCAGCTCCAACGAATTC+AGG | - | chr1.3:40226885-40226904 | None:intergenic | 40.0% | |
| CAACTTCTTCAATGGACGAT+TGG | + | chr1.3:40229319-40229338 | MS.gene034659:CDS | 40.0% | |
| CATCCAAATGAGTTTCAACG+TGG | + | chr1.3:40230352-40230371 | MS.gene034659:intron | 40.0% | |
| CCTAATGTCAAGCATTCAAG+AGG | - | chr1.3:40226952-40226971 | None:intergenic | 40.0% | |
| CCTCTTGAATGCTTGACATT+AGG | + | chr1.3:40226949-40226968 | MS.gene034659:CDS | 40.0% | |
| CCTTAGTCAATAGTAGCTTG+GGG | + | chr1.3:40226455-40226474 | MS.gene034659:intron | 40.0% | |
| CGTTGAAACTCATTTGGATG+TGG | - | chr1.3:40230352-40230371 | None:intergenic | 40.0% | |
| CTACATCTTGAACAGAGCAA+AGG | + | chr1.3:40227161-40227180 | MS.gene034659:intron | 40.0% | |
| CTAGAACAATTGGACCAGTT+TGG | + | chr1.3:40229206-40229225 | MS.gene034659:intron | 40.0% | |
| CTCAAGAGGATCCTACATTA+GGG | + | chr1.3:40227561-40227580 | MS.gene034659:intron | 40.0% | |
| CTGCTTCTTTGCCTCATATT+CGG | - | chr1.3:40229538-40229557 | None:intergenic | 40.0% | |
| GAGGCAAAAACGCCTTATAA+GGG | - | chr1.3:40226801-40226820 | None:intergenic | 40.0% | |
| GAGTTGCCTTAGGTAAAGAT+TGG | + | chr1.3:40226386-40226405 | MS.gene034659:intron | 40.0% | |
| GATGAAAGTGGATGAAGAAG+TGG | + | chr1.3:40225446-40225465 | MS.gene034659:CDS | 40.0% | |
| GATGAAGAAGTGGTTGAAAG+TGG | + | chr1.3:40225456-40225475 | MS.gene034659:CDS | 40.0% | |
| GATTCATCATTAGCTCCTGA+AGG | + | chr1.3:40229273-40229292 | MS.gene034659:CDS | 40.0% | |
| GCAAAAGGTCTAGTTGATCA+GGG | + | chr1.3:40228604-40228623 | MS.gene034659:CDS | 40.0% | |
| GGACAAGGAAAAATCTCAAG+AGG | + | chr1.3:40227547-40227566 | MS.gene034659:intron | 40.0% | |
| GGGTAGTCAGATACTTTACA+AGG | + | chr1.3:40228624-40228643 | MS.gene034659:CDS | 40.0% | |
| GTGGATCCTGAATATACTTC+CGG | - | chr1.3:40227747-40227766 | None:intergenic | 40.0% | |
| GTTATTGCTGTAGCTTTCTC+AGG | + | chr1.3:40230132-40230151 | MS.gene034659:CDS | 40.0% | |
| GTTGTCTTTCATAGATGCTG+AGG | + | chr1.3:40227771-40227790 | MS.gene034659:CDS | 40.0% | |
| TCAAATTCTACGGTGAATGC+TGG | + | chr1.3:40226744-40226763 | MS.gene034659:CDS | 40.0% | |
| TCATATGGGTCATGCTCAAA+TGG | + | chr1.3:40225384-40225403 | MS.gene034659:CDS | 40.0% | |
| TCTCAAGAGGATCCTACATT+AGG | + | chr1.3:40227560-40227579 | MS.gene034659:intron | 40.0% | |
| TCTCTCAAGAACCGAATATG+AGG | + | chr1.3:40229524-40229543 | MS.gene034659:CDS | 40.0% | |
| TCTTTACCTAAGGCAACTCA+TGG | - | chr1.3:40226385-40226404 | None:intergenic | 40.0% | |
| TGATGACAATCTGTATCTGG+TGG | - | chr1.3:40229086-40229105 | None:intergenic | 40.0% | |
| TGGATCCTGAATATACTTCC+GGG | - | chr1.3:40227746-40227765 | None:intergenic | 40.0% | |
| TTCCCACGTTGAAACTCATT+TGG | - | chr1.3:40230358-40230377 | None:intergenic | 40.0% | |
| TTGTCACCCTACATTACCAA+AGG | - | chr1.3:40228379-40228398 | None:intergenic | 40.0% | |
| TTTCAATGCCCTGAATTCGT+TGG | + | chr1.3:40226873-40226892 | MS.gene034659:CDS | 40.0% | |
| TTTCAGCTCCAACGAATTCA+GGG | - | chr1.3:40226884-40226903 | None:intergenic | 40.0% | |
| ! | AAGTATCGTCGATGTGTCTT+AGG | - | chr1.3:40229873-40229892 | None:intergenic | 40.0% |
| ! | ATCAACTAGACCTTTTGCCA+AGG | - | chr1.3:40228602-40228621 | None:intergenic | 40.0% |
| ! | GAGAAGTATGTTATACCTGG+TGG | + | chr1.3:40225591-40225610 | MS.gene034659:CDS | 40.0% |
| ! | GAGTCTTATAGAAAGGGACA+AGG | + | chr1.3:40227532-40227551 | MS.gene034659:intron | 40.0% |
| ! | GCTATGGAATGTGAGAGTTT+TGG | - | chr1.3:40230198-40230217 | None:intergenic | 40.0% |
| ! | GGAGAAAAAGTCACCTGTTT+TGG | + | chr1.3:40230544-40230563 | MS.gene034659:CDS | 40.0% |
| ! | GTGCCACTAGCTAATAACAA+TGG | - | chr1.3:40226245-40226264 | None:intergenic | 40.0% |
| ! | TCACTTCCATTCTAGCTATC+TGG | - | chr1.3:40228161-40228180 | None:intergenic | 40.0% |
| ! | TGGAAGTTCTCTTCCTCTTT+TGG | - | chr1.3:40228999-40229018 | None:intergenic | 40.0% |
| ! | TTGTCATCATTTTGTGCTGG+AGG | + | chr1.3:40229097-40229116 | MS.gene034659:CDS | 40.0% |
| !! | AGAAGCACCTTTGGTAATGT+AGG | + | chr1.3:40228369-40228388 | MS.gene034659:intron | 40.0% |
| !! | GAAGCACCTTTGGTAATGTA+GGG | + | chr1.3:40228370-40228389 | MS.gene034659:intron | 40.0% |
| !! | GAGGGGTATACTTTTGATGT+TGG | + | chr1.3:40225636-40225655 | MS.gene034659:CDS | 40.0% |
| !! | TTATTGGTTCTGGGATTGGT+GGG | + | chr1.3:40225517-40225536 | MS.gene034659:CDS | 40.0% |
| !!! | AGGTGCTAGAGTTTTGGTTT+TGG | + | chr1.3:40225569-40225588 | MS.gene034659:CDS | 40.0% |
| !!! | GGAGTTCTGGCTTTTATCAT+AGG | + | chr1.3:40225613-40225632 | MS.gene034659:CDS | 40.0% |
| !!! | TCTGGCTTTTATCATAGGGA+GGG | + | chr1.3:40225618-40225637 | MS.gene034659:CDS | 40.0% |
| !!! | TGTGAAAGGTGCTAGAGTTT+TGG | + | chr1.3:40225563-40225582 | MS.gene034659:CDS | 40.0% |
| !!! | TTCTGGCTTTTATCATAGGG+AGG | + | chr1.3:40225617-40225636 | MS.gene034659:CDS | 40.0% |
| AAATGAACGGTTGTCGGATC+AGG | - | chr1.3:40226626-40226645 | None:intergenic | 45.0% | |
| AACTGCCCAAAAAGGTAGAG+TGG | - | chr1.3:40226919-40226938 | None:intergenic | 45.0% | |
| ACAGCAATAACACCTTGTCC+AGG | - | chr1.3:40230123-40230142 | None:intergenic | 45.0% | |
| ACCAGTTTGGAGGAACCATA+TGG | + | chr1.3:40229219-40229238 | MS.gene034659:CDS | 45.0% | |
| ACGAGTATTATCACCGAGCA+GGG | + | chr1.3:40228655-40228674 | MS.gene034659:CDS | 45.0% | |
| ACGTACATCTTCAGAGCGAA+TGG | - | chr1.3:40227678-40227697 | None:intergenic | 45.0% | |
| AGCATTCCAAAGGGGTTGTT+AGG | + | chr1.3:40229930-40229949 | MS.gene034659:CDS | 45.0% | |
| AGTTGGGGGTTAAAAGGTTC+AGG | - | chr1.3:40229831-40229850 | None:intergenic | 45.0% | |
| ATATGAGGCAAAGAAGCAGG+TGG | + | chr1.3:40229539-40229558 | MS.gene034659:CDS | 45.0% | |
| ATTCTACGGTGAATGCTGGA+AGG | + | chr1.3:40226748-40226767 | MS.gene034659:CDS | 45.0% | |
| CAGCAATAACACCTTGTCCA+GGG | - | chr1.3:40230122-40230141 | None:intergenic | 45.0% | |
| CATCGAGTAGCTGCAGATAT+TGG | + | chr1.3:40230168-40230187 | MS.gene034659:CDS | 45.0% | |
| CATTGGAAGCAGTTGGTTGT+CGG | + | chr1.3:40226588-40226607 | MS.gene034659:CDS | 45.0% | |
| CCCAACTCTAACTCTAGGTA+GGG | + | chr1.3:40229844-40229863 | MS.gene034659:intron | 45.0% | |
| CCCTACCTAGAGTTAGAGTT+GGG | - | chr1.3:40229847-40229866 | None:intergenic | 45.0% | |
| CCTACCTAGAGTTAGAGTTG+GGG | - | chr1.3:40229846-40229865 | None:intergenic | 45.0% | |
| CGAATATGAGGCAAAGAAGC+AGG | + | chr1.3:40229536-40229555 | MS.gene034659:CDS | 45.0% | |
| CTAACCAAATGTGTCCCATC+TGG | - | chr1.3:40228836-40228855 | None:intergenic | 45.0% | |
| CTACCTAGAGTTAGAGTTGG+GGG | - | chr1.3:40229845-40229864 | None:intergenic | 45.0% | |
| CTGAATATACTTCCGGGCTA+TGG | - | chr1.3:40227740-40227759 | None:intergenic | 45.0% | |
| GAACAATTGGACCAGTTTGG+AGG | + | chr1.3:40229209-40229228 | MS.gene034659:intron | 45.0% | |
| GACGGCATCCTCAAATTCTA+CGG | + | chr1.3:40226734-40226753 | MS.gene034659:CDS | 45.0% | |
| GCTCTTCCATAGCTACATGA+AGG | - | chr1.3:40225357-40225376 | None:intergenic | 45.0% | |
| GCTTATGCATTAGTAGGCCT+GGG | - | chr1.3:40226197-40226216 | None:intergenic | 45.0% | |
| GGAGGCAAAAACGCCTTATA+AGG | - | chr1.3:40226802-40226821 | None:intergenic | 45.0% | |
| GGCAAAAGGTCTAGTTGATC+AGG | + | chr1.3:40228603-40228622 | MS.gene034659:CDS | 45.0% | |
| GTGGGATTAACTACCCTCTT+GGG | + | chr1.3:40228554-40228573 | MS.gene034659:CDS | 45.0% | |
| GTTCTGTGTGACAGACACTT+TGG | + | chr1.3:40228532-40228551 | MS.gene034659:CDS | 45.0% | |
| GTTGGGGGTTAAAAGGTTCA+GGG | - | chr1.3:40229830-40229849 | None:intergenic | 45.0% | |
| TAACCCCCAACTCTAACTCT+AGG | + | chr1.3:40229839-40229858 | MS.gene034659:intron | 45.0% | |
| TACTTGGGAGTTAGGGCTAT+AGG | - | chr1.3:40227303-40227322 | None:intergenic | 45.0% | |
| TACTTTCCCCACGAAAAGGA+CGG | + | chr1.3:40226716-40226735 | MS.gene034659:CDS | 45.0% | |
| TAGTCAATAGTAGCTTGGGG+TGG | + | chr1.3:40226458-40226477 | MS.gene034659:intron | 45.0% | |
| TATGGGTCATGCTCAAATGG+TGG | + | chr1.3:40225387-40225406 | MS.gene034659:CDS | 45.0% | |
| TCATGACCATGAGTTGCCTT+AGG | + | chr1.3:40226376-40226395 | MS.gene034659:intron | 45.0% | |
| TCCATATGGTTCCTCCAAAC+TGG | - | chr1.3:40229223-40229242 | None:intergenic | 45.0% | |
| TCCCTACCTAGAGTTAGAGT+TGG | - | chr1.3:40229848-40229867 | None:intergenic | 45.0% | |
| TGAAGGATATGACGACCTTC+AGG | - | chr1.3:40229291-40229310 | None:intergenic | 45.0% | |
| TGCTTATGCATTAGTAGGCC+TGG | - | chr1.3:40226198-40226217 | None:intergenic | 45.0% | |
| TGGGATTAACTACCCTCTTG+GGG | + | chr1.3:40228555-40228574 | MS.gene034659:CDS | 45.0% | |
| TGGTAGAAGAAAAAGGGTGG+TGG | + | chr1.3:40225407-40225426 | MS.gene034659:CDS | 45.0% | |
| TGGTGGTAGAAGAAAAAGGG+TGG | + | chr1.3:40225404-40225423 | MS.gene034659:CDS | 45.0% | |
| TGGTTGAAAGTGGGAAGAGA+GGG | + | chr1.3:40225466-40225485 | MS.gene034659:CDS | 45.0% | |
| TGTGTGACAGACACTTTGGT+GGG | + | chr1.3:40228536-40228555 | MS.gene034659:CDS | 45.0% | |
| TGTTAAAATAGGAGGGGTGG+GGG | - | chr1.3:40227634-40227653 | None:intergenic | 45.0% | |
| TTCTTCAATGGACGATTGGC+AGG | + | chr1.3:40229323-40229342 | MS.gene034659:CDS | 45.0% | |
| ! | AGGAGCCACTCTACCTTTTT+GGG | + | chr1.3:40226911-40226930 | MS.gene034659:CDS | 45.0% |
| ! | CAAAAGCACGGCAATAGTGA+TGG | - | chr1.3:40230394-40230413 | None:intergenic | 45.0% |
| ! | CATAGCCCGGAAGTATATTC+AGG | + | chr1.3:40227738-40227757 | MS.gene034659:CDS | 45.0% |
| ! | CATTTTGTGCTGGAGGTAGT+TGG | + | chr1.3:40229104-40229123 | MS.gene034659:intron | 45.0% |
| ! | CCCCAAGCTACTATTGACTA+AGG | - | chr1.3:40226458-40226477 | None:intergenic | 45.0% |
| ! | GAGTTACTTTCCCCACGAAA+AGG | + | chr1.3:40226712-40226731 | MS.gene034659:CDS | 45.0% |
| ! | GCTTGGTTGGTTAAGAACAC+TGG | + | chr1.3:40230586-40230605 | MS.gene034659:CDS | 45.0% |
| ! | TACTTTTGCAGGTAGGAGTG+AGG | + | chr1.3:40228761-40228780 | MS.gene034659:intron | 45.0% |
| !! | AAGAGAGGGGATTTTGGTGA+AGG | + | chr1.3:40225480-40225499 | MS.gene034659:CDS | 45.0% |
| !! | ACACAAGCATTGGAAGCAGT+TGG | + | chr1.3:40226581-40226600 | MS.gene034659:CDS | 45.0% |
| !! | AGAGAGGGGATTTTGGTGAA+GGG | + | chr1.3:40225481-40225500 | MS.gene034659:CDS | 45.0% |
| !! | CTGGCTTTTATCATAGGGAG+GGG | + | chr1.3:40225619-40225638 | MS.gene034659:CDS | 45.0% |
| !! | GTTATTGGTTCTGGGATTGG+TGG | + | chr1.3:40225516-40225535 | MS.gene034659:CDS | 45.0% |
| !! | TTTTGGATGGCATGCTGCTT+GGG | + | chr1.3:40230561-40230580 | MS.gene034659:CDS | 45.0% |
| AAAATGCTGGAGCCATAGCC+CGG | + | chr1.3:40227725-40227744 | MS.gene034659:CDS | 50.0% | |
| AATGCCACGCAGCATTCCAA+AGG | + | chr1.3:40229920-40229939 | MS.gene034659:CDS | 50.0% | |
| ACACATGGGGGTTAAAGCAG+AGG | + | chr1.3:40229055-40229074 | MS.gene034659:CDS | 50.0% | |
| ACTCGAACTGAGAGGTGGTT+TGG | - | chr1.3:40226656-40226675 | None:intergenic | 50.0% | |
| ACTTTGTAGGTGGGGTGTGA+TGG | - | chr1.3:40225323-40225342 | None:intergenic | 50.0% | |
| AGAGAGAGCAAGAGAGACAG+AGG | - | chr1.3:40228477-40228496 | None:intergenic | 50.0% | |
| AGCAGCATGCCATCCAAAAC+AGG | - | chr1.3:40230560-40230579 | None:intergenic | 50.0% | |
| AGGTAGGCAATACCGAGTAG+TGG | + | chr1.3:40229343-40229362 | MS.gene034659:intron | 50.0% | |
| AGTGTCTGTCACACAGAACC+TGG | - | chr1.3:40228531-40228550 | None:intergenic | 50.0% | |
| ATGCCACGCAGCATTCCAAA+GGG | + | chr1.3:40229921-40229940 | MS.gene034659:CDS | 50.0% | |
| CACGAGTATTATCACCGAGC+AGG | + | chr1.3:40228654-40228673 | MS.gene034659:CDS | 50.0% | |
| CACGGCAATAGTGATGGTAC+AGG | - | chr1.3:40230388-40230407 | None:intergenic | 50.0% | |
| CCCCAACTCTAACTCTAGGT+AGG | + | chr1.3:40229843-40229862 | MS.gene034659:intron | 50.0% | |
| CTGTGTGACAGACACTTTGG+TGG | + | chr1.3:40228535-40228554 | MS.gene034659:CDS | 50.0% | |
| GCTACCAGATGGGACACATT+TGG | + | chr1.3:40228829-40228848 | MS.gene034659:CDS | 50.0% | |
| GGATCCTACATTAGGGACAG+AGG | + | chr1.3:40227568-40227587 | MS.gene034659:intron | 50.0% | |
| GGCATTCCTAACAACCCCTT+TGG | - | chr1.3:40229939-40229958 | None:intergenic | 50.0% | |
| GGGATTAACTACCCTCTTGG+GGG | + | chr1.3:40228556-40228575 | MS.gene034659:CDS | 50.0% | |
| GGGGTGTGATGGTAGATGAT+GGG | - | chr1.3:40225312-40225331 | None:intergenic | 50.0% | |
| GGGTGTGATGGTAGATGATG+GGG | - | chr1.3:40225311-40225330 | None:intergenic | 50.0% | |
| GGTGGGATTAACTACCCTCT+TGG | + | chr1.3:40228553-40228572 | MS.gene034659:CDS | 50.0% | |
| GGTTGAAAGTGGGAAGAGAG+GGG | + | chr1.3:40225467-40225486 | MS.gene034659:CDS | 50.0% | |
| GTAGGAGTGAGGCTTTCAGA+CGG | + | chr1.3:40228772-40228791 | MS.gene034659:CDS | 50.0% | |
| GTCCATAAGTACCCTCGTCA+CGG | - | chr1.3:40229899-40229918 | None:intergenic | 50.0% | |
| GTGACTGCAGCTCCCTTATA+AGG | + | chr1.3:40226786-40226805 | MS.gene034659:intron | 50.0% | |
| GTGGTTGAAAGTGGGAAGAG+AGG | + | chr1.3:40225465-40225484 | MS.gene034659:CDS | 50.0% | |
| GTTATACCTGGTGGGAGTTC+TGG | + | chr1.3:40225600-40225619 | MS.gene034659:CDS | 50.0% | |
| GTTGGAGCTGAAATCGCTTG+AGG | + | chr1.3:40226891-40226910 | MS.gene034659:CDS | 50.0% | |
| TAAAAGCCAGAACTCCCACC+AGG | - | chr1.3:40225609-40225628 | None:intergenic | 50.0% | |
| TCAATGGACGATTGGCAGGT+AGG | + | chr1.3:40229327-40229346 | MS.gene034659:intron | 50.0% | |
| TCAGTTCATTGACCCCTGCT+TGG | + | chr1.3:40227906-40227925 | MS.gene034659:intron | 50.0% | |
| TCCATAAGTACCCTCGTCAC+GGG | - | chr1.3:40229898-40229917 | None:intergenic | 50.0% | |
| TCCTACATTAGGGACAGAGG+CGG | + | chr1.3:40227571-40227590 | MS.gene034659:intron | 50.0% | |
| TGGGGTGTGATGGTAGATGA+TGG | - | chr1.3:40225313-40225332 | None:intergenic | 50.0% | |
| TGGTGGGATTGCAAAGTCCT+TGG | + | chr1.3:40228582-40228601 | MS.gene034659:CDS | 50.0% | |
| TTAGGGACAGAGGCGGTATA+TGG | + | chr1.3:40227578-40227597 | MS.gene034659:intron | 50.0% | |
| ! | AGGGTGGTGGTGAAAGTGAA+AGG | + | chr1.3:40225420-40225439 | MS.gene034659:CDS | 50.0% |
| ! | AGTGGGAAGAGAGGGGATTT+TGG | + | chr1.3:40225474-40225493 | MS.gene034659:CDS | 50.0% |
| ! | GAGGAGCCACTCTACCTTTT+TGG | + | chr1.3:40226910-40226929 | MS.gene034659:CDS | 50.0% |
| ! | GCTATGGCTCCAGCATTTTG+AGG | - | chr1.3:40227724-40227743 | None:intergenic | 50.0% |
| ! | GGGTGGTGGTGAAAGTGAAA+GGG | + | chr1.3:40225421-40225440 | MS.gene034659:CDS | 50.0% |
| ! | GGTGTGATGGTAGATGATGG+GGG | - | chr1.3:40225310-40225329 | None:intergenic | 50.0% |
| ! | TTTGGAATGCTGCGTGGCAT+TGG | - | chr1.3:40229921-40229940 | None:intergenic | 50.0% |
| !! | CTGAGAGGTGGTTTGGTAGA+TGG | - | chr1.3:40226649-40226668 | None:intergenic | 50.0% |
| !! | GGATGATGCAGAAGCACCTT+TGG | + | chr1.3:40228360-40228379 | MS.gene034659:intron | 50.0% |
| !! | GTTTTGGATGGCATGCTGCT+TGG | + | chr1.3:40230560-40230579 | MS.gene034659:CDS | 50.0% |
| !! | TGGAGTCTGCAAAGCGTTGA+CGG | - | chr1.3:40227983-40228002 | None:intergenic | 50.0% |
| AAAATAGGAGGGGTGGGGGT+GGG | - | chr1.3:40227630-40227649 | None:intergenic | 55.0% | |
| ACCGCCTCTGTCCCTAATGT+AGG | - | chr1.3:40227575-40227594 | None:intergenic | 55.0% | |
| ACGATACTTAGCCCGTGACG+AGG | + | chr1.3:40229884-40229903 | MS.gene034659:CDS | 55.0% | |
| ACTTACGGCTTTGCCCTGCT+CGG | - | chr1.3:40228671-40228690 | None:intergenic | 55.0% | |
| AGCAGTTGGTTGTCGGATGC+AGG | + | chr1.3:40226595-40226614 | MS.gene034659:CDS | 55.0% | |
| CGATACTTAGCCCGTGACGA+GGG | + | chr1.3:40229885-40229904 | MS.gene034659:CDS | 55.0% | |
| CTCTGTGCACTCGAACTGAG+AGG | - | chr1.3:40226664-40226683 | None:intergenic | 55.0% | |
| GACAGTTGCTTCCCTGGACA+AGG | + | chr1.3:40230108-40230127 | MS.gene034659:CDS | 55.0% | |
| GGGACTCAGTTGGCTGTGAA+AGG | + | chr1.3:40225549-40225568 | MS.gene034659:CDS | 55.0% | |
| GGGTGGGTGTGTATAGAAGG+TGG | - | chr1.3:40227614-40227633 | None:intergenic | 55.0% | |
| GTTGGAGACAGTTGCTTCCC+TGG | + | chr1.3:40230102-40230121 | MS.gene034659:CDS | 55.0% | |
| GTTGGTTGCTGGGACTCAGT+TGG | + | chr1.3:40225539-40225558 | MS.gene034659:CDS | 55.0% | |
| TAAAATAGGAGGGGTGGGGG+TGG | - | chr1.3:40227631-40227650 | None:intergenic | 55.0% | |
| TCGATGGATGCTCGAAGACC+TGG | - | chr1.3:40229606-40229625 | None:intergenic | 55.0% | |
| TGCCACGCAGCATTCCAAAG+GGG | + | chr1.3:40229922-40229941 | MS.gene034659:CDS | 55.0% | |
| TGGGGGTGGGTGTGTATAGA+AGG | - | chr1.3:40227617-40227636 | None:intergenic | 55.0% | |
| TGTGCACTCGAACTGAGAGG+TGG | - | chr1.3:40226661-40226680 | None:intergenic | 55.0% | |
| ! | AACTACCCTCTTGGGGGTGT+TGG | + | chr1.3:40228562-40228581 | MS.gene034659:CDS | 55.0% |
| ! | AGGATGCCGTCCTTTTCGTG+GGG | - | chr1.3:40226725-40226744 | None:intergenic | 55.0% |
| ! | GAGGATGCCGTCCTTTTCGT+GGG | - | chr1.3:40226726-40226745 | None:intergenic | 55.0% |
| ! | TGAGGATGCCGTCCTTTTCG+TGG | - | chr1.3:40226727-40226746 | None:intergenic | 55.0% |
| ! | TGCTGCTTGGGTTGCTTGGT+TGG | + | chr1.3:40230573-40230592 | MS.gene034659:CDS | 55.0% |
| !! | AACCCCTTTGGAATGCTGCG+TGG | - | chr1.3:40229927-40229946 | None:intergenic | 55.0% |
| !! | GATGGTAGATGATGGGGGTG+TGG | - | chr1.3:40225305-40225324 | None:intergenic | 55.0% |
| !! | GGATTGGTGGGTTGGTTGCT+GGG | + | chr1.3:40225529-40225548 | MS.gene034659:CDS | 55.0% |
| !! | TGGTTCTGGGATTGGTGGGT+TGG | + | chr1.3:40225521-40225540 | MS.gene034659:CDS | 55.0% |
| ATCCCACCAACACCCCCAAG+AGG | - | chr1.3:40228571-40228590 | None:intergenic | 60.0% | |
| TCCCACCAACACCCCCAAGA+GGG | - | chr1.3:40228570-40228589 | None:intergenic | 60.0% | |
| ! | GGCATGCTGCTTGGGTTGCT+TGG | + | chr1.3:40230569-40230588 | MS.gene034659:CDS | 60.0% |
| !! | ACCCTCTTGGGGGTGTTGGT+GGG | + | chr1.3:40228566-40228585 | MS.gene034659:CDS | 60.0% |
| !! | GCCCGTGACGAGGGTACTTA+TGG | + | chr1.3:40229894-40229913 | MS.gene034659:CDS | 60.0% |
| !! | GGGATTGGTGGGTTGGTTGC+TGG | + | chr1.3:40225528-40225547 | MS.gene034659:CDS | 60.0% |
| !! | TACCCTCTTGGGGGTGTTGG+TGG | + | chr1.3:40228565-40228584 | MS.gene034659:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 40225270 | 40230613 | 40225270 | ID=MS.gene034659 |
| chr1.3 | mRNA | 40225270 | 40230613 | 40225270 | ID=MS.gene034659.t1;Parent=MS.gene034659 |
| chr1.3 | exon | 40225270 | 40225689 | 40225270 | ID=MS.gene034659.t1.exon1;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40225270 | 40225689 | 40225270 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40226563 | 40226769 | 40226563 | ID=MS.gene034659.t1.exon2;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40226563 | 40226769 | 40226563 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40226871 | 40226970 | 40226871 | ID=MS.gene034659.t1.exon3;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40226871 | 40226970 | 40226871 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40227710 | 40227792 | 40227710 | ID=MS.gene034659.t1.exon4;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40227710 | 40227792 | 40227710 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40227964 | 40228020 | 40227964 | ID=MS.gene034659.t1.exon5;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40227964 | 40228020 | 40227964 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40228532 | 40228684 | 40228532 | ID=MS.gene034659.t1.exon6;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40228532 | 40228684 | 40228532 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40228772 | 40228850 | 40228772 | ID=MS.gene034659.t1.exon7;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40228772 | 40228850 | 40228772 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40228970 | 40229118 | 40228970 | ID=MS.gene034659.t1.exon8;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40228970 | 40229118 | 40228970 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40229210 | 40229344 | 40229210 | ID=MS.gene034659.t1.exon9;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40229210 | 40229344 | 40229210 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40229522 | 40229635 | 40229522 | ID=MS.gene034659.t1.exon10;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40229522 | 40229635 | 40229522 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40229861 | 40229971 | 40229861 | ID=MS.gene034659.t1.exon11;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40229861 | 40229971 | 40229861 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40230081 | 40230189 | 40230081 | ID=MS.gene034659.t1.exon12;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40230081 | 40230189 | 40230081 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| chr1.3 | exon | 40230540 | 40230613 | 40230540 | ID=MS.gene034659.t1.exon13;Parent=MS.gene034659.t1 |
| chr1.3 | CDS | 40230540 | 40230613 | 40230540 | ID=cds.MS.gene034659.t1;Parent=MS.gene034659.t1 |
| Gene Sequence |
| Protein sequence |
