Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43489.t1 | KEH32763.1 | 98.9 | 563 | 6 | 0 | 1 | 563 | 17 | 579 | 0.00E+00 | 1122.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43489.t1 | Q9M9Y8 | 31.5 | 550 | 323 | 17 | 30 | 559 | 66 | 581 | 2.6e-58 | 228.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43489.t1 | A0A072UUM0 | 98.9 | 563 | 6 | 0 | 1 | 563 | 17 | 579 | 0.0e+00 | 1122.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene43489 | 0.880806 | 4.05E-70 | -1.69E-46 |
MS.gene049171 | MS.gene43489 | 0.87215 | 3.97E-67 | -1.69E-46 |
MS.gene049173 | MS.gene43489 | 0.81087 | 9.30E-51 | -1.69E-46 |
MS.gene049217 | MS.gene43489 | 0.809695 | 1.67E-50 | -1.69E-46 |
MS.gene049222 | MS.gene43489 | 0.864444 | 1.21E-64 | -1.69E-46 |
MS.gene049257 | MS.gene43489 | 0.834638 | 2.67E-56 | -1.69E-46 |
MS.gene049285 | MS.gene43489 | 0.848355 | 6.46E-60 | -1.69E-46 |
MS.gene049320 | MS.gene43489 | 0.816871 | 4.42E-52 | -1.69E-46 |
MS.gene049396 | MS.gene43489 | 0.807295 | 5.42E-50 | -1.69E-46 |
MS.gene04939 | MS.gene43489 | 0.806854 | 6.72E-50 | -1.69E-46 |
MS.gene049427 | MS.gene43489 | 0.807894 | 4.04E-50 | -1.69E-46 |
MS.gene049609 | MS.gene43489 | 0.905126 | 5.96E-80 | -1.69E-46 |
MS.gene049633 | MS.gene43489 | 0.839933 | 1.18E-57 | -1.69E-46 |
MS.gene049805 | MS.gene43489 | 0.891622 | 3.36E-74 | -1.69E-46 |
MS.gene050163 | MS.gene43489 | 0.809168 | 2.16E-50 | -1.69E-46 |
MS.gene050170 | MS.gene43489 | 0.848104 | 7.58E-60 | -1.69E-46 |
MS.gene050323 | MS.gene43489 | 0.82491 | 6.25E-54 | -1.69E-46 |
MS.gene050496 | MS.gene43489 | 0.800623 | 1.32E-48 | -1.69E-46 |
MS.gene050504 | MS.gene43489 | 0.823786 | 1.15E-53 | -1.69E-46 |
MS.gene050507 | MS.gene43489 | 0.829595 | 4.72E-55 | -1.69E-46 |
MS.gene050538 | MS.gene43489 | 0.853651 | 2.08E-61 | -1.69E-46 |
MS.gene050577 | MS.gene43489 | 0.845611 | 3.65E-59 | -1.69E-46 |
MS.gene050593 | MS.gene43489 | 0.879034 | 1.73E-69 | -1.69E-46 |
MS.gene050625 | MS.gene43489 | 0.805397 | 1.36E-49 | -1.69E-46 |
MS.gene050647 | MS.gene43489 | -0.808388 | 3.17E-50 | -1.69E-46 |
MS.gene050670 | MS.gene43489 | 0.878247 | 3.28E-69 | -1.69E-46 |
MS.gene050675 | MS.gene43489 | 0.815433 | 9.27E-52 | -1.69E-46 |
MS.gene050699 | MS.gene43489 | 0.833532 | 5.05E-56 | -1.69E-46 |
MS.gene050747 | MS.gene43489 | 0.904813 | 8.29E-80 | -1.69E-46 |
MS.gene050772 | MS.gene43489 | 0.882389 | 1.09E-70 | -1.69E-46 |
MS.gene05080 | MS.gene43489 | 0.844052 | 9.60E-59 | -1.69E-46 |
MS.gene050812 | MS.gene43489 | 0.840201 | 1.00E-57 | -1.69E-46 |
MS.gene05081 | MS.gene43489 | 0.881356 | 2.57E-70 | -1.69E-46 |
MS.gene050868 | MS.gene43489 | 0.821513 | 3.88E-53 | -1.69E-46 |
MS.gene050871 | MS.gene43489 | 0.822921 | 1.83E-53 | -1.69E-46 |
MS.gene050950 | MS.gene43489 | 0.892648 | 1.31E-74 | -1.69E-46 |
MS.gene050986 | MS.gene43489 | 0.8068 | 6.90E-50 | -1.69E-46 |
MS.gene05100 | MS.gene43489 | 0.80591 | 1.06E-49 | -1.69E-46 |
MS.gene05105 | MS.gene43489 | 0.881369 | 2.54E-70 | -1.69E-46 |
MS.gene051387 | MS.gene43489 | 0.870629 | 1.26E-66 | -1.69E-46 |
MS.gene051438 | MS.gene43489 | 0.814772 | 1.30E-51 | -1.69E-46 |
MS.gene051525 | MS.gene43489 | 0.883838 | 3.20E-71 | -1.69E-46 |
MS.gene051551 | MS.gene43489 | 0.805593 | 1.24E-49 | -1.69E-46 |
MS.gene051666 | MS.gene43489 | 0.852446 | 4.59E-61 | -1.69E-46 |
MS.gene051694 | MS.gene43489 | 0.805643 | 1.21E-49 | -1.69E-46 |
MS.gene051734 | MS.gene43489 | 0.826592 | 2.49E-54 | -1.69E-46 |
MS.gene051838 | MS.gene43489 | 0.894575 | 2.17E-75 | -1.69E-46 |
MS.gene051858 | MS.gene43489 | 0.820105 | 8.18E-53 | -1.69E-46 |
MS.gene051874 | MS.gene43489 | 0.80006 | 1.72E-48 | -1.69E-46 |
MS.gene051941 | MS.gene43489 | 0.845562 | 3.76E-59 | -1.69E-46 |
MS.gene052134 | MS.gene43489 | 0.819672 | 1.03E-52 | -1.69E-46 |
MS.gene052135 | MS.gene43489 | 0.800272 | 1.56E-48 | -1.69E-46 |
MS.gene052136 | MS.gene43489 | 0.803433 | 3.49E-49 | -1.69E-46 |
MS.gene052164 | MS.gene43489 | 0.84488 | 5.75E-59 | -1.69E-46 |
MS.gene052318 | MS.gene43489 | 0.804951 | 1.69E-49 | -1.69E-46 |
MS.gene052346 | MS.gene43489 | 0.863573 | 2.26E-64 | -1.69E-46 |
MS.gene05240 | MS.gene43489 | -0.820039 | 8.46E-53 | -1.69E-46 |
MS.gene052414 | MS.gene43489 | 0.868762 | 5.13E-66 | -1.69E-46 |
MS.gene052421 | MS.gene43489 | 0.904152 | 1.65E-79 | -1.69E-46 |
MS.gene052481 | MS.gene43489 | 0.840465 | 8.55E-58 | -1.69E-46 |
MS.gene052482 | MS.gene43489 | 0.812612 | 3.88E-51 | -1.69E-46 |
MS.gene052484 | MS.gene43489 | 0.819261 | 1.27E-52 | -1.69E-46 |
MS.gene052485 | MS.gene43489 | 0.805549 | 1.26E-49 | -1.69E-46 |
MS.gene052486 | MS.gene43489 | 0.81898 | 1.48E-52 | -1.69E-46 |
MS.gene052501 | MS.gene43489 | 0.91788 | 3.09E-86 | -1.69E-46 |
MS.gene052503 | MS.gene43489 | 0.903912 | 2.12E-79 | -1.69E-46 |
MS.gene052505 | MS.gene43489 | 0.910591 | 1.58E-82 | -1.69E-46 |
MS.gene052506 | MS.gene43489 | 0.813591 | 2.37E-51 | -1.69E-46 |
MS.gene052615 | MS.gene43489 | 0.895421 | 9.74E-76 | -1.69E-46 |
MS.gene052822 | MS.gene43489 | 0.814697 | 1.35E-51 | -1.69E-46 |
MS.gene052823 | MS.gene43489 | 0.900523 | 6.73E-78 | -1.69E-46 |
MS.gene052825 | MS.gene43489 | 0.896668 | 2.96E-76 | -1.69E-46 |
MS.gene052870 | MS.gene43489 | 0.832062 | 1.17E-55 | -1.69E-46 |
MS.gene052872 | MS.gene43489 | 0.838091 | 3.53E-57 | -1.69E-46 |
MS.gene052966 | MS.gene43489 | 0.835421 | 1.69E-56 | -1.69E-46 |
MS.gene052982 | MS.gene43489 | 0.885006 | 1.18E-71 | -1.69E-46 |
MS.gene053103 | MS.gene43489 | 0.810286 | 1.24E-50 | -1.69E-46 |
MS.gene053104 | MS.gene43489 | 0.805386 | 1.37E-49 | -1.69E-46 |
MS.gene053117 | MS.gene43489 | 0.804472 | 2.13E-49 | -1.69E-46 |
MS.gene053203 | MS.gene43489 | 0.845216 | 4.66E-59 | -1.69E-46 |
MS.gene053207 | MS.gene43489 | 0.851642 | 7.77E-61 | -1.69E-46 |
MS.gene053213 | MS.gene43489 | 0.867654 | 1.17E-65 | -1.69E-46 |
MS.gene053286 | MS.gene43489 | 0.860587 | 1.86E-63 | -1.69E-46 |
MS.gene053322 | MS.gene43489 | 0.800265 | 1.56E-48 | -1.69E-46 |
MS.gene053436 | MS.gene43489 | 0.863066 | 3.25E-64 | -1.69E-46 |
MS.gene053449 | MS.gene43489 | 0.800956 | 1.13E-48 | -1.69E-46 |
MS.gene053479 | MS.gene43489 | 0.831217 | 1.89E-55 | -1.69E-46 |
MS.gene053480 | MS.gene43489 | 0.874942 | 4.55E-68 | -1.69E-46 |
MS.gene053574 | MS.gene43489 | 0.887149 | 1.84E-72 | -1.69E-46 |
MS.gene053579 | MS.gene43489 | 0.8406 | 7.89E-58 | -1.69E-46 |
MS.gene053626 | MS.gene43489 | 0.831723 | 1.42E-55 | -1.69E-46 |
MS.gene053632 | MS.gene43489 | 0.850682 | 1.45E-60 | -1.69E-46 |
MS.gene053824 | MS.gene43489 | 0.891851 | 2.72E-74 | -1.69E-46 |
MS.gene053873 | MS.gene43489 | 0.831324 | 1.78E-55 | -1.69E-46 |
MS.gene053912 | MS.gene43489 | 0.81637 | 5.73E-52 | -1.69E-46 |
MS.gene053916 | MS.gene43489 | 0.82361 | 1.26E-53 | -1.69E-46 |
MS.gene054107 | MS.gene43489 | 0.837287 | 5.68E-57 | -1.69E-46 |
MS.gene054344 | MS.gene43489 | 0.83374 | 4.48E-56 | -1.69E-46 |
MS.gene054408 | MS.gene43489 | 0.875486 | 2.97E-68 | -1.69E-46 |
MS.gene054595 | MS.gene43489 | 0.839685 | 1.37E-57 | -1.69E-46 |
MS.gene054600 | MS.gene43489 | 0.854745 | 1.00E-61 | -1.69E-46 |
MS.gene054642 | MS.gene43489 | 0.822099 | 2.84E-53 | -1.69E-46 |
MS.gene054706 | MS.gene43489 | -0.806546 | 7.81E-50 | -1.69E-46 |
MS.gene05470 | MS.gene43489 | 0.846613 | 1.95E-59 | -1.69E-46 |
MS.gene054719 | MS.gene43489 | 0.80379 | 2.95E-49 | -1.69E-46 |
MS.gene054742 | MS.gene43489 | -0.803335 | 3.66E-49 | -1.69E-46 |
MS.gene054884 | MS.gene43489 | -0.841767 | 3.89E-58 | -1.69E-46 |
MS.gene054927 | MS.gene43489 | 0.883111 | 5.91E-71 | -1.69E-46 |
MS.gene05494 | MS.gene43489 | 0.832951 | 7.05E-56 | -1.69E-46 |
MS.gene054954 | MS.gene43489 | 0.818803 | 1.62E-52 | -1.69E-46 |
MS.gene05505 | MS.gene43489 | 0.880488 | 5.27E-70 | -1.69E-46 |
MS.gene055116 | MS.gene43489 | 0.812651 | 3.81E-51 | -1.69E-46 |
MS.gene055206 | MS.gene43489 | 0.853207 | 2.78E-61 | -1.69E-46 |
MS.gene055224 | MS.gene43489 | 0.867439 | 1.37E-65 | -1.69E-46 |
MS.gene055289 | MS.gene43489 | 0.856127 | 3.97E-62 | -1.69E-46 |
MS.gene055362 | MS.gene43489 | 0.837466 | 5.11E-57 | -1.69E-46 |
MS.gene055369 | MS.gene43489 | 0.828253 | 9.96E-55 | -1.69E-46 |
MS.gene055370 | MS.gene43489 | 0.804308 | 2.30E-49 | -1.69E-46 |
MS.gene055412 | MS.gene43489 | 0.82198 | 3.03E-53 | -1.69E-46 |
MS.gene055502 | MS.gene43489 | 0.865904 | 4.21E-65 | -1.69E-46 |
MS.gene055539 | MS.gene43489 | 0.87295 | 2.15E-67 | -1.69E-46 |
MS.gene055577 | MS.gene43489 | 0.853085 | 3.02E-61 | -1.69E-46 |
MS.gene055722 | MS.gene43489 | 0.833876 | 4.15E-56 | -1.69E-46 |
MS.gene055741 | MS.gene43489 | 0.897794 | 9.95E-77 | -1.69E-46 |
MS.gene055744 | MS.gene43489 | 0.89419 | 3.11E-75 | -1.69E-46 |
MS.gene055748 | MS.gene43489 | 0.823459 | 1.37E-53 | -1.69E-46 |
MS.gene055750 | MS.gene43489 | 0.824556 | 7.57E-54 | -1.69E-46 |
MS.gene055751 | MS.gene43489 | 0.806237 | 9.07E-50 | -1.69E-46 |
MS.gene05589 | MS.gene43489 | 0.861032 | 1.36E-63 | -1.69E-46 |
MS.gene055909 | MS.gene43489 | 0.829669 | 4.52E-55 | -1.69E-46 |
MS.gene055911 | MS.gene43489 | 0.834125 | 3.59E-56 | -1.69E-46 |
MS.gene055941 | MS.gene43489 | 0.873028 | 2.02E-67 | -1.69E-46 |
MS.gene056040 | MS.gene43489 | 0.847575 | 1.06E-59 | -1.69E-46 |
MS.gene056166 | MS.gene43489 | 0.876199 | 1.69E-68 | -1.69E-46 |
MS.gene056409 | MS.gene43489 | 0.801259 | 9.80E-49 | -1.69E-46 |
MS.gene056446 | MS.gene43489 | 0.812332 | 4.47E-51 | -1.69E-46 |
MS.gene056449 | MS.gene43489 | 0.806349 | 8.59E-50 | -1.69E-46 |
MS.gene056504 | MS.gene43489 | 0.843021 | 1.81E-58 | -1.69E-46 |
MS.gene056510 | MS.gene43489 | 0.805296 | 1.43E-49 | -1.69E-46 |
MS.gene056511 | MS.gene43489 | 0.834788 | 2.45E-56 | -1.69E-46 |
MS.gene056514 | MS.gene43489 | 0.85208 | 5.84E-61 | -1.69E-46 |
MS.gene056590 | MS.gene43489 | -0.803472 | 3.43E-49 | -1.69E-46 |
MS.gene056591 | MS.gene43489 | -0.804506 | 2.09E-49 | -1.69E-46 |
MS.gene056610 | MS.gene43489 | 0.817161 | 3.81E-52 | -1.69E-46 |
MS.gene056657 | MS.gene43489 | 0.834742 | 2.51E-56 | -1.69E-46 |
MS.gene056692 | MS.gene43489 | 0.850143 | 2.05E-60 | -1.69E-46 |
MS.gene056796 | MS.gene43489 | 0.811626 | 6.37E-51 | -1.69E-46 |
MS.gene056877 | MS.gene43489 | 0.872833 | 2.35E-67 | -1.69E-46 |
MS.gene056897 | MS.gene43489 | 0.802729 | 4.89E-49 | -1.69E-46 |
MS.gene056946 | MS.gene43489 | 0.805007 | 1.64E-49 | -1.69E-46 |
MS.gene057011 | MS.gene43489 | 0.80719 | 5.70E-50 | -1.69E-46 |
MS.gene057019 | MS.gene43489 | 0.84756 | 1.07E-59 | -1.69E-46 |
MS.gene057048 | MS.gene43489 | 0.868167 | 7.99E-66 | -1.69E-46 |
MS.gene057076 | MS.gene43489 | 0.883219 | 5.40E-71 | -1.69E-46 |
MS.gene057086 | MS.gene43489 | 0.801123 | 1.04E-48 | -1.69E-46 |
MS.gene057124 | MS.gene43489 | 0.842643 | 2.28E-58 | -1.69E-46 |
MS.gene057146 | MS.gene43489 | 0.816356 | 5.77E-52 | -1.69E-46 |
MS.gene057196 | MS.gene43489 | 0.829219 | 5.82E-55 | -1.69E-46 |
MS.gene057261 | MS.gene43489 | -0.801454 | 8.94E-49 | -1.69E-46 |
MS.gene057289 | MS.gene43489 | 0.806459 | 8.14E-50 | -1.69E-46 |
MS.gene057331 | MS.gene43489 | 0.822492 | 2.30E-53 | -1.69E-46 |
MS.gene057332 | MS.gene43489 | 0.838669 | 2.51E-57 | -1.69E-46 |
MS.gene057416 | MS.gene43489 | 0.869076 | 4.06E-66 | -1.69E-46 |
MS.gene057658 | MS.gene43489 | 0.897558 | 1.25E-76 | -1.69E-46 |
MS.gene057734 | MS.gene43489 | 0.825255 | 5.18E-54 | -1.69E-46 |
MS.gene057749 | MS.gene43489 | 0.81505 | 1.13E-51 | -1.69E-46 |
MS.gene057823 | MS.gene43489 | 0.831263 | 1.84E-55 | -1.69E-46 |
MS.gene057831 | MS.gene43489 | 0.850847 | 1.30E-60 | -1.69E-46 |
MS.gene057856 | MS.gene43489 | 0.863812 | 1.91E-64 | -1.69E-46 |
MS.gene05787 | MS.gene43489 | 0.836728 | 7.89E-57 | -1.69E-46 |
MS.gene058007 | MS.gene43489 | 0.839652 | 1.39E-57 | -1.69E-46 |
MS.gene058019 | MS.gene43489 | 0.87674 | 1.10E-68 | -1.69E-46 |
MS.gene058120 | MS.gene43489 | 0.82106 | 4.93E-53 | -1.69E-46 |
MS.gene058130 | MS.gene43489 | 0.849536 | 3.04E-60 | -1.69E-46 |
MS.gene058157 | MS.gene43489 | 0.802788 | 4.75E-49 | -1.69E-46 |
MS.gene058233 | MS.gene43489 | 0.807679 | 4.49E-50 | -1.69E-46 |
MS.gene058338 | MS.gene43489 | 0.865866 | 4.33E-65 | -1.69E-46 |
MS.gene058376 | MS.gene43489 | 0.871443 | 6.81E-67 | -1.69E-46 |
MS.gene05837 | MS.gene43489 | 0.879759 | 9.59E-70 | -1.69E-46 |
MS.gene058418 | MS.gene43489 | -0.805983 | 1.03E-49 | -1.69E-46 |
MS.gene058419 | MS.gene43489 | 0.862967 | 3.48E-64 | -1.69E-46 |
MS.gene058444 | MS.gene43489 | 0.911565 | 5.27E-83 | -1.69E-46 |
MS.gene058544 | MS.gene43489 | 0.862933 | 3.57E-64 | -1.69E-46 |
MS.gene058700 | MS.gene43489 | 0.879937 | 8.29E-70 | -1.69E-46 |
MS.gene058773 | MS.gene43489 | 0.801842 | 7.44E-49 | -1.69E-46 |
MS.gene058838 | MS.gene43489 | 0.907343 | 5.62E-81 | -1.69E-46 |
MS.gene05883 | MS.gene43489 | 0.828545 | 8.47E-55 | -1.69E-46 |
MS.gene058948 | MS.gene43489 | 0.832991 | 6.89E-56 | -1.69E-46 |
MS.gene059022 | MS.gene43489 | 0.819128 | 1.37E-52 | -1.69E-46 |
MS.gene059023 | MS.gene43489 | 0.902098 | 1.37E-78 | -1.69E-46 |
MS.gene05913 | MS.gene43489 | 0.815131 | 1.08E-51 | -1.69E-46 |
MS.gene059141 | MS.gene43489 | 0.800562 | 1.36E-48 | -1.69E-46 |
MS.gene05914 | MS.gene43489 | 0.840378 | 9.02E-58 | -1.69E-46 |
MS.gene059303 | MS.gene43489 | 0.816431 | 5.55E-52 | -1.69E-46 |
MS.gene05934 | MS.gene43489 | 0.861953 | 7.14E-64 | -1.69E-46 |
MS.gene059367 | MS.gene43489 | 0.806879 | 6.64E-50 | -1.69E-46 |
MS.gene059368 | MS.gene43489 | 0.801055 | 1.08E-48 | -1.69E-46 |
MS.gene059420 | MS.gene43489 | 0.810127 | 1.35E-50 | -1.69E-46 |
MS.gene059455 | MS.gene43489 | 0.849569 | 2.97E-60 | -1.69E-46 |
MS.gene059498 | MS.gene43489 | 0.800419 | 1.45E-48 | -1.69E-46 |
MS.gene059499 | MS.gene43489 | 0.805056 | 1.60E-49 | -1.69E-46 |
MS.gene059502 | MS.gene43489 | 0.800883 | 1.17E-48 | -1.69E-46 |
MS.gene059512 | MS.gene43489 | 0.815119 | 1.09E-51 | -1.69E-46 |
MS.gene059536 | MS.gene43489 | 0.822318 | 2.53E-53 | -1.69E-46 |
MS.gene059667 | MS.gene43489 | 0.871743 | 5.42E-67 | -1.69E-46 |
MS.gene059677 | MS.gene43489 | 0.840754 | 7.19E-58 | -1.69E-46 |
MS.gene059688 | MS.gene43489 | 0.83835 | 3.03E-57 | -1.69E-46 |
MS.gene059692 | MS.gene43489 | 0.821483 | 3.94E-53 | -1.69E-46 |
MS.gene059695 | MS.gene43489 | 0.835564 | 1.56E-56 | -1.69E-46 |
MS.gene059718 | MS.gene43489 | 0.869804 | 2.35E-66 | -1.69E-46 |
MS.gene059756 | MS.gene43489 | 0.845117 | 4.96E-59 | -1.69E-46 |
MS.gene059801 | MS.gene43489 | 0.841658 | 4.16E-58 | -1.69E-46 |
MS.gene059902 | MS.gene43489 | 0.812684 | 3.75E-51 | -1.69E-46 |
MS.gene059955 | MS.gene43489 | -0.807164 | 5.78E-50 | -1.69E-46 |
MS.gene06000 | MS.gene43489 | 0.825939 | 3.56E-54 | -1.69E-46 |
MS.gene060087 | MS.gene43489 | -0.801534 | 8.61E-49 | -1.69E-46 |
MS.gene060372 | MS.gene43489 | 0.845611 | 3.65E-59 | -1.69E-46 |
MS.gene060403 | MS.gene43489 | 0.827478 | 1.53E-54 | -1.69E-46 |
MS.gene060485 | MS.gene43489 | 0.855055 | 8.15E-62 | -1.69E-46 |
MS.gene060675 | MS.gene43489 | 0.800051 | 1.73E-48 | -1.69E-46 |
MS.gene060762 | MS.gene43489 | 0.845272 | 4.50E-59 | -1.69E-46 |
MS.gene060778 | MS.gene43489 | 0.831377 | 1.73E-55 | -1.69E-46 |
MS.gene06077 | MS.gene43489 | 0.858431 | 8.28E-63 | -1.69E-46 |
MS.gene060804 | MS.gene43489 | 0.826233 | 3.04E-54 | -1.69E-46 |
MS.gene060835 | MS.gene43489 | 0.89789 | 9.06E-77 | -1.69E-46 |
MS.gene060837 | MS.gene43489 | 0.827598 | 1.43E-54 | -1.69E-46 |
MS.gene06092 | MS.gene43489 | 0.886753 | 2.60E-72 | -1.69E-46 |
MS.gene06097 | MS.gene43489 | 0.815534 | 8.80E-52 | -1.69E-46 |
MS.gene060982 | MS.gene43489 | 0.828254 | 9.96E-55 | -1.69E-46 |
MS.gene061041 | MS.gene43489 | 0.817987 | 2.48E-52 | -1.69E-46 |
MS.gene061150 | MS.gene43489 | 0.853784 | 1.90E-61 | -1.69E-46 |
MS.gene061154 | MS.gene43489 | 0.837961 | 3.82E-57 | -1.69E-46 |
MS.gene061231 | MS.gene43489 | 0.82584 | 3.76E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene43489 | MS.gene39233 | PPI |
MS.gene034659 | MS.gene43489 | PPI |
MS.gene46506 | MS.gene43489 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43489.t1 | MTR_4g134780 | 98.934 | 563 | 6 | 0 | 1 | 563 | 17 | 579 | 0.0 | 1152 |
MS.gene43489.t1 | MTR_1g054965 | 31.858 | 565 | 318 | 21 | 17 | 550 | 42 | 570 | 5.08e-64 | 220 |
MS.gene43489.t1 | MTR_1g054965 | 34.085 | 355 | 215 | 12 | 203 | 550 | 72 | 414 | 1.94e-51 | 182 |
MS.gene43489.t1 | MTR_1g054965 | 30.080 | 502 | 284 | 21 | 17 | 488 | 42 | 506 | 1.33e-43 | 163 |
MS.gene43489.t1 | MTR_1g054965 | 31.507 | 292 | 181 | 12 | 203 | 488 | 30 | 308 | 2.71e-31 | 124 |
MS.gene43489.t1 | MTR_8g077580 | 24.486 | 584 | 326 | 26 | 24 | 534 | 4 | 545 | 3.06e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43489.t1 | AT1G57770 | 80.762 | 525 | 101 | 0 | 39 | 563 | 50 | 574 | 0.0 | 899 |
MS.gene43489.t1 | AT1G06820 | 31.947 | 529 | 309 | 16 | 39 | 550 | 75 | 569 | 3.80e-66 | 226 |
MS.gene43489.t1 | AT1G06820 | 31.947 | 529 | 309 | 16 | 39 | 550 | 75 | 569 | 6.90e-66 | 225 |
MS.gene43489.t1 | AT1G06820 | 34.463 | 354 | 215 | 9 | 203 | 550 | 108 | 450 | 8.30e-54 | 190 |
MS.gene43489.t1 | AT1G06820 | 29.718 | 461 | 275 | 15 | 39 | 483 | 75 | 502 | 3.04e-45 | 167 |
MS.gene43489.t1 | AT5G49555 | 22.638 | 561 | 351 | 23 | 31 | 534 | 3 | 537 | 2.23e-14 | 76.3 |
Find 145 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGCAAAGAGTCAAGTATT+TGG | 0.236602 | 8.4:+124638 | None:intergenic |
ATTGCTCACAACAGCCTTCT+TGG | 0.241353 | 8.4:+123888 | None:intergenic |
TGCTCAAGTTCTTGATGCTT+TGG | 0.242947 | 8.4:-124986 | MS.gene43489:CDS |
TCAAGAATGGCAGAAGCTTT+TGG | 0.272982 | 8.4:-124836 | MS.gene43489:CDS |
TTACTTTCTTTCTTGCTTGC+TGG | 0.273947 | 8.4:-124583 | MS.gene43489:CDS |
TGCCATTCTTGAACAGCTTC+AGG | 0.275584 | 8.4:+124847 | None:intergenic |
GAGTCAAGTATTTGGGAAAA+AGG | 0.286218 | 8.4:+124646 | None:intergenic |
GCTCAAGTTCTTGATGCTTT+GGG | 0.288521 | 8.4:-124985 | MS.gene43489:CDS |
TTCCAAAGTCTTACTCAAAT+AGG | 0.312564 | 8.4:-123822 | MS.gene43489:CDS |
ATCATATAGTTGTAAATGAT+TGG | 0.312848 | 8.4:-123635 | MS.gene43489:CDS |
AACTCAAATGGTTCAGTTCC+TGG | 0.320765 | 8.4:+123507 | None:intergenic |
ATCTTTCATGCATCTCCATT+TGG | 0.323021 | 8.4:-123776 | MS.gene43489:CDS |
CTGAGGACCCATTTGGAAAA+AGG | 0.326579 | 8.4:+124699 | None:intergenic |
GCTGGTACAGATACCTTTCC+TGG | 0.338263 | 8.4:-123200 | MS.gene43489:CDS |
TTGCAAAGAGTCAAGTATTT+GGG | 0.338675 | 8.4:+124639 | None:intergenic |
AGCTTTAAGATTTCTGTATT+CGG | 0.338946 | 8.4:+123458 | None:intergenic |
GTGTTACATGCTTATCTTCC+AGG | 0.349073 | 8.4:-123525 | MS.gene43489:CDS |
CTATCAGTTCGAGGAGATTT+CGG | 0.355188 | 8.4:-124769 | MS.gene43489:CDS |
CAACAATAAAGGTGTGGAAT+TGG | 0.355420 | 8.4:+123167 | None:intergenic |
TCTTTCATGCATCTCCATTT+GGG | 0.358441 | 8.4:-123775 | MS.gene43489:CDS |
TCCCAGCTGCTTGATGCAAT+TGG | 0.358531 | 8.4:-123053 | MS.gene43489:CDS |
CCTGCGCTACTTATGATTCA+TGG | 0.371994 | 8.4:-124951 | MS.gene43489:CDS |
ATCCTATTTGAGTAAGACTT+TGG | 0.386923 | 8.4:+123820 | None:intergenic |
GAAACAGATGTAATTGTGAT+TGG | 0.389065 | 8.4:-125195 | MS.gene43489:CDS |
TGGAGTCTCCACAACAATAA+AGG | 0.393345 | 8.4:+123156 | None:intergenic |
AGAATCCTTTCATACGCAAT+TGG | 0.397759 | 8.4:-124612 | MS.gene43489:CDS |
ACTCCTAATCTGGCACCTAC+TGG | 0.397996 | 8.4:-123555 | MS.gene43489:CDS |
TTCCAATTGCATCAAGCAGC+TGG | 0.400845 | 8.4:+123051 | None:intergenic |
CATTTCTCCCTGCTGAATCC+TGG | 0.401568 | 8.4:+123305 | None:intergenic |
TCATATAGTTGTAAATGATT+GGG | 0.417919 | 8.4:-123634 | MS.gene43489:CDS |
TAGTGTACTTACTCCTAATC+TGG | 0.419014 | 8.4:-123565 | MS.gene43489:CDS |
AACTGAACCATTTGAGTTGT+GGG | 0.419173 | 8.4:-123502 | MS.gene43489:CDS |
CAGGGTATACGCAGCGATCT+AGG | 0.420176 | 8.4:-123663 | MS.gene43489:CDS |
TCCGGTCCATCATTATTCTC+TGG | 0.421373 | 8.4:-125042 | MS.gene43489:CDS |
ATTGTGATTGGGAGTGGTAT+TGG | 0.424946 | 8.4:-125183 | MS.gene43489:CDS |
GTCATAGTAATGGGAGGATT+AGG | 0.428264 | 8.4:-125266 | MS.gene43489:CDS |
AAATCTCCTCGAACTGATAG+AGG | 0.432086 | 8.4:+124772 | None:intergenic |
GTTGTAAATGATTGGGAAAG+AGG | 0.432129 | 8.4:-123627 | MS.gene43489:CDS |
GAGCAGCCTGAGGACCCATT+TGG | 0.432543 | 8.4:+124692 | None:intergenic |
TCACACATCAAAGGTTTCTT+CGG | 0.434054 | 8.4:-123256 | MS.gene43489:CDS |
GTACGAGGACTAGAGAAGTT+TGG | 0.436491 | 8.4:-124077 | MS.gene43489:CDS |
ATCATCATAGTCATAGTAAT+GGG | 0.437707 | 8.4:-125275 | MS.gene43489:CDS |
CGTGACAAGAAATCAGCTTC+AGG | 0.438051 | 8.4:+124916 | None:intergenic |
ACTGCAGGGACGCCAATGCC+AGG | 0.458440 | 8.4:+123128 | None:intergenic |
AAATGTGAAGTGAAGTTAGT+TGG | 0.458953 | 8.4:-123287 | MS.gene43489:CDS |
ACTTTGGAACAACTTCTTGA+GGG | 0.464503 | 8.4:+123836 | None:intergenic |
GCACCACTGGCAGCAACTGC+AGG | 0.466053 | 8.4:+123113 | None:intergenic |
TCTGTACCAGCTTGTATAGC+TGG | 0.473355 | 8.4:+123212 | None:intergenic |
CAGTGGGACCAGGATTCAGC+AGG | 0.478022 | 8.4:-123313 | MS.gene43489:CDS |
AGGTTTACATGTTTGCAGAA+TGG | 0.481167 | 8.4:-124163 | MS.gene43489:CDS |
AAAGGCTATAAGTTTGATTC+CGG | 0.484501 | 8.4:-125060 | MS.gene43489:CDS |
GATTAGGAAAGGTGGGGTTG+TGG | 0.485581 | 8.4:-125250 | MS.gene43489:CDS |
ATTCCACACCTTTATTGTTG+TGG | 0.492890 | 8.4:-123164 | MS.gene43489:CDS |
AAACAGATGTAATTGTGATT+GGG | 0.492966 | 8.4:-125194 | MS.gene43489:CDS |
CATCATCATAGTCATAGTAA+TGG | 0.495952 | 8.4:-125276 | MS.gene43489:CDS |
GTGGAGAGAGCAGTGGGACC+AGG | 0.499060 | 8.4:-123323 | MS.gene43489:CDS |
ATGGGAGGATTAGGAAAGGT+GGG | 0.499467 | 8.4:-125257 | MS.gene43489:CDS |
CAGCACCTCCAGCATGGTCG+TGG | 0.499748 | 8.4:+125100 | None:intergenic |
CGGAGGAACAGAGGAACATA+TGG | 0.499814 | 8.4:-123236 | MS.gene43489:CDS |
AGTCCTTCCCACAACTCAAA+TGG | 0.501774 | 8.4:+123495 | None:intergenic |
CAATACCTGCAGCTCCATCA+AGG | 0.503593 | 8.4:+124111 | None:intergenic |
TCCCTTGTCTACAGCTGCAA+TGG | 0.505505 | 8.4:-124803 | MS.gene43489:CDS |
AGAAATCAGCTTCAGGTACA+TGG | 0.506854 | 8.4:+124923 | None:intergenic |
CTCCTAATCTGGCACCTACT+GGG | 0.508705 | 8.4:-123554 | MS.gene43489:CDS |
GCTTCTCAGCTTCACTCCAA+TGG | 0.509152 | 8.4:+123998 | None:intergenic |
CCTCAGCATCAAATCCCAAA+TGG | 0.511011 | 8.4:+123761 | None:intergenic |
CCATGAATCATAAGTAGCGC+AGG | 0.513899 | 8.4:+124951 | None:intergenic |
GACGCCAATGCCAGGAAAAG+TGG | 0.514468 | 8.4:+123136 | None:intergenic |
TAGTATATTGTCTGCAGAGA+TGG | 0.518916 | 8.4:-124548 | MS.gene43489:intron |
TTCCCAGTAGGTGCCAGATT+AGG | 0.527245 | 8.4:+123552 | None:intergenic |
ACCAGAGAATAATGATGGAC+CGG | 0.531175 | 8.4:+125041 | None:intergenic |
GAACTGAACCATTTGAGTTG+TGG | 0.531241 | 8.4:-123503 | MS.gene43489:CDS |
ATTAGCTACAATTGCACCAC+TGG | 0.535074 | 8.4:+123100 | None:intergenic |
GACTTTGGAACAACTTCTTG+AGG | 0.536940 | 8.4:+123835 | None:intergenic |
GTCCTGAAGCTGTTCAAGAA+TGG | 0.537122 | 8.4:-124849 | MS.gene43489:CDS |
TCAATCCAATTGCGTATGAA+AGG | 0.537955 | 8.4:+124607 | None:intergenic |
TGCAAACCAGAGAATAATGA+TGG | 0.543994 | 8.4:+125036 | None:intergenic |
TTCGAAAGCCACGACCATGC+TGG | 0.544052 | 8.4:-125108 | MS.gene43489:CDS |
TTCTCTGGTTTGCAGTCAAG+AGG | 0.544317 | 8.4:-125027 | MS.gene43489:CDS |
AAGGACCTTCACAACTATGC+AGG | 0.545742 | 8.4:-124871 | MS.gene43489:CDS |
CGCTACTTATGATTCATGGA+TGG | 0.556127 | 8.4:-124947 | MS.gene43489:CDS |
GTCCCTGCAGTTGCTGCCAG+TGG | 0.557851 | 8.4:-123116 | MS.gene43489:CDS |
AGCCATTGCAGCTGTAGACA+AGG | 0.561564 | 8.4:+124801 | None:intergenic |
AATACCTGCAGCTCCATCAA+GGG | 0.564396 | 8.4:+124112 | None:intergenic |
TCCAATTGCATCAAGCAGCT+GGG | 0.566641 | 8.4:+123052 | None:intergenic |
GTGATTGGGAGTGGTATTGG+TGG | 0.570399 | 8.4:-125180 | MS.gene43489:CDS |
GCATCAAGAACTTGAGCAAG+AGG | 0.572179 | 8.4:+124991 | None:intergenic |
GTTGAAAATGACAGAGCCAT+TGG | 0.574831 | 8.4:-124014 | MS.gene43489:CDS |
CCATTTGGGATTTGATGCTG+AGG | 0.576837 | 8.4:-123761 | MS.gene43489:intron |
TTTGCAGTCAAGAGGTCCAC+AGG | 0.577098 | 8.4:-125019 | MS.gene43489:CDS |
CACATCAAAGGTTTCTTCGG+AGG | 0.578196 | 8.4:-123253 | MS.gene43489:CDS |
AATCTCCTCGAACTGATAGA+GGG | 0.579191 | 8.4:+124773 | None:intergenic |
CAGGACCTGCATAGTTGTGA+AGG | 0.579792 | 8.4:+124866 | None:intergenic |
AGAGCAGTGGAGAGAGCAGT+GGG | 0.579813 | 8.4:-123329 | MS.gene43489:CDS |
GAAGTCCACTCACACATCAA+AGG | 0.579934 | 8.4:-123265 | MS.gene43489:CDS |
GCAGTTCGTACATGCCAAGA+AGG | 0.580617 | 8.4:-123902 | MS.gene43489:intron |
GAGAGCAGTGGAGAGAGCAG+TGG | 0.581460 | 8.4:-123330 | MS.gene43489:CDS |
ATCATAAGTAGCGCAGGGGA+CGG | 0.583077 | 8.4:+124957 | None:intergenic |
ACTGAGTTGTGCAGCACTGT+TGG | 0.584888 | 8.4:-125157 | MS.gene43489:CDS |
AATGGGAGGATTAGGAAAGG+TGG | 0.589689 | 8.4:-125258 | MS.gene43489:CDS |
GCCATTGCAGCTGTAGACAA+GGG | 0.590322 | 8.4:+124802 | None:intergenic |
CGAGGACTAGAGAAGTTTGG+TGG | 0.591605 | 8.4:-124074 | MS.gene43489:CDS |
CAAACAACAAATAGATAATG+TGG | 0.592493 | 8.4:-123352 | MS.gene43489:intron |
GATGTAATTGTGATTGGGAG+TGG | 0.593011 | 8.4:-125189 | MS.gene43489:CDS |
AGATTAGGAGTAAGTACACT+AGG | 0.595451 | 8.4:+123567 | None:intergenic |
GCTGATTTCTTGTCACGCAT+AGG | 0.597690 | 8.4:-124910 | MS.gene43489:CDS |
CACCACTGGCAGCAACTGCA+GGG | 0.605933 | 8.4:+123114 | None:intergenic |
TGGAGTTGAATGTCCAGGAA+AGG | 0.606615 | 8.4:+123187 | None:intergenic |
CATGAATCATAAGTAGCGCA+GGG | 0.607675 | 8.4:+124952 | None:intergenic |
GAACCATTTGAGTTGTGGGA+AGG | 0.609081 | 8.4:-123498 | MS.gene43489:CDS |
TTTGCAGAATGGTACAAACC+AGG | 0.612324 | 8.4:-124152 | MS.gene43489:CDS |
TATGGACCAGCTATACAAGC+TGG | 0.613740 | 8.4:-123218 | MS.gene43489:CDS |
TTGCAGAATGGTACAAACCA+GGG | 0.620272 | 8.4:-124151 | MS.gene43489:CDS |
ATAGATAATGTGGAGAGCAG+TGG | 0.622582 | 8.4:-123342 | MS.gene43489:intron |
GGAATTGGAGTTGAATGTCC+AGG | 0.624562 | 8.4:+123182 | None:intergenic |
AGTAATGGGAGGATTAGGAA+AGG | 0.625364 | 8.4:-125261 | MS.gene43489:CDS |
AGGTTTCTTCGGAGGAACAG+AGG | 0.626999 | 8.4:-123245 | MS.gene43489:CDS |
GACTAGAGAAGTTTGGTGGG+CGG | 0.629357 | 8.4:-124070 | MS.gene43489:CDS |
ATTGTTGATGCTCTTGTACG+AGG | 0.629566 | 8.4:-124092 | MS.gene43489:CDS |
CATCAAGAACTTGAGCAAGA+GGG | 0.633604 | 8.4:+124992 | None:intergenic |
ATTGGAGTGAAGCTGAGAAG+CGG | 0.638801 | 8.4:-123996 | MS.gene43489:CDS |
ATCTCCTCGAACTGATAGAG+GGG | 0.641198 | 8.4:+124774 | None:intergenic |
AATGAGCAGCACCTCCAGCA+TGG | 0.642493 | 8.4:+125094 | None:intergenic |
ATACCTGCAGCTCCATCAAG+GGG | 0.643456 | 8.4:+124113 | None:intergenic |
TCTTAAAGCTCAAAGATCAG+AGG | 0.643901 | 8.4:-123445 | MS.gene43489:intron |
TGCAGAATGGTACAAACCAG+GGG | 0.644445 | 8.4:-124150 | MS.gene43489:CDS |
ATCATAGTCATAGTAATGGG+AGG | 0.651087 | 8.4:-125272 | MS.gene43489:CDS |
AAAAGGTGAGAGAAGTTGTG+TGG | 0.652152 | 8.4:+124663 | None:intergenic |
TGTAACACATGTTTCCCAGT+AGG | 0.652977 | 8.4:+123540 | None:intergenic |
TGAGCAAGAGGGTTAGCCTG+TGG | 0.654171 | 8.4:+125003 | None:intergenic |
GATTTCTCTTCAAAGTCACG+TGG | 0.656256 | 8.4:-124048 | MS.gene43489:CDS |
GAGGACTAGAGAAGTTTGGT+GGG | 0.661720 | 8.4:-124073 | MS.gene43489:CDS |
TCTCCACAACAATAAAGGTG+TGG | 0.665845 | 8.4:+123161 | None:intergenic |
AGAAACCTTTGATGTGTGAG+TGG | 0.673422 | 8.4:+123260 | None:intergenic |
AGGTGCATATCTAGCAGCAG+CGG | 0.676346 | 8.4:+124735 | None:intergenic |
TCTCCTCGAACTGATAGAGG+GGG | 0.678258 | 8.4:+124775 | None:intergenic |
GAAAGCCACGACCATGCTGG+AGG | 0.682926 | 8.4:-125105 | MS.gene43489:CDS |
TGGGAGGATTAGGAAAGGTG+GGG | 0.683293 | 8.4:-125256 | MS.gene43489:CDS |
AGTGGGACCAGGATTCAGCA+GGG | 0.693423 | 8.4:-123312 | MS.gene43489:CDS |
TGTGAGCAATGCATCAATGT+GGG | 0.699079 | 8.4:-123875 | MS.gene43489:CDS |
TTGTGAGCAATGCATCAATG+TGG | 0.700183 | 8.4:-123876 | MS.gene43489:CDS |
GTGGAACGAAGAGCAGCCTG+AGG | 0.714071 | 8.4:+124682 | None:intergenic |
ATGAATCATAAGTAGCGCAG+GGG | 0.721253 | 8.4:+124953 | None:intergenic |
GCAGAATGGTACAAACCAGG+GGG | 0.746992 | 8.4:-124149 | MS.gene43489:CDS |
TACCTGCAGCTCCATCAAGG+GGG | 0.749948 | 8.4:+124114 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAAATTAATATACTTACT+TGG | + | chr8.4:124391-124410 | None:intergenic | 15.0% |
!!! | TGATTTTTAAGAAATGAAAT+TGG | + | chr8.4:124062-124081 | None:intergenic | 15.0% |
!! | ATAACACATAAATCTCTAAA+GGG | - | chr8.4:123979-123998 | MS.gene43489:intron | 20.0% |
!! | ATCATATAGTTGTAAATGAT+TGG | - | chr8.4:124726-124745 | MS.gene43489:CDS | 20.0% |
!! | TCATATAGTTGTAAATGATT+GGG | - | chr8.4:124727-124746 | MS.gene43489:CDS | 20.0% |
! | AAACAGATGTAATTGTGATT+GGG | - | chr8.4:123167-123186 | MS.gene43489:CDS | 25.0% |
! | ATCATCATAGTCATAGTAAT+GGG | - | chr8.4:123086-123105 | MS.gene43489:CDS | 25.0% |
! | CAAACAACAAATAGATAATG+TGG | - | chr8.4:125009-125028 | MS.gene43489:CDS | 25.0% |
! | CATAACACATAAATCTCTAA+AGG | - | chr8.4:123978-123997 | MS.gene43489:intron | 25.0% |
!! | TTCAATACCTTTTTCCAAAT+GGG | - | chr8.4:123655-123674 | MS.gene43489:CDS | 25.0% |
!! | TTTCAATACCTTTTTCCAAA+TGG | - | chr8.4:123654-123673 | MS.gene43489:CDS | 25.0% |
!!! | AAAAAGGTATTGAAAAGAGA+AGG | + | chr8.4:123649-123668 | None:intergenic | 25.0% |
!!! | AGCTTTAAGATTTCTGTATT+CGG | + | chr8.4:124906-124925 | None:intergenic | 25.0% |
AAAGGCTATAAGTTTGATTC+CGG | - | chr8.4:123301-123320 | MS.gene43489:CDS | 30.0% | |
AAATGTGAAGTGAAGTTAGT+TGG | - | chr8.4:125074-125093 | MS.gene43489:CDS | 30.0% | |
AGGATAGAAACTAGTTATTG+TGG | + | chr8.4:123920-123939 | None:intergenic | 30.0% | |
ATCCTATTTGAGTAAGACTT+TGG | + | chr8.4:124544-124563 | None:intergenic | 30.0% | |
CATCATCATAGTCATAGTAA+TGG | - | chr8.4:123085-123104 | MS.gene43489:CDS | 30.0% | |
GAAACAGATGTAATTGTGAT+TGG | - | chr8.4:123166-123185 | MS.gene43489:CDS | 30.0% | |
TTCCAAAGTCTTACTCAAAT+AGG | - | chr8.4:124539-124558 | MS.gene43489:intron | 30.0% | |
TTGCAAAGAGTCAAGTATTT+GGG | + | chr8.4:123725-123744 | None:intergenic | 30.0% | |
ACCTAAAAGCAGCAGTTAAA+TGG | - | chr8.4:124081-124100 | MS.gene43489:CDS | 35.0% | |
ACTGTCTCTAAGTAAACAAC+AGG | + | chr8.4:124025-124044 | None:intergenic | 35.0% | |
AGAATCCTTTCATACGCAAT+TGG | - | chr8.4:123749-123768 | MS.gene43489:intron | 35.0% | |
AGATTAGGAGTAAGTACACT+AGG | + | chr8.4:124797-124816 | None:intergenic | 35.0% | |
AGGTTTACATGTTTGCAGAA+TGG | - | chr8.4:124198-124217 | MS.gene43489:intron | 35.0% | |
ATCTTTCATGCATCTCCATT+TGG | - | chr8.4:124585-124604 | MS.gene43489:CDS | 35.0% | |
ATTCCACACCTTTATTGTTG+TGG | - | chr8.4:125197-125216 | MS.gene43489:CDS | 35.0% | |
GAAAACTAACGAAATAGTGC+TGG | - | chr8.4:124107-124126 | MS.gene43489:CDS | 35.0% | |
GAATACTTCAAACAGATGCA+TGG | + | chr8.4:124665-124684 | None:intergenic | 35.0% | |
GAGTCAAGTATTTGGGAAAA+AGG | + | chr8.4:123718-123737 | None:intergenic | 35.0% | |
GTTGCAAAGAGTCAAGTATT+TGG | + | chr8.4:123726-123745 | None:intergenic | 35.0% | |
GTTGTAAATGATTGGGAAAG+AGG | - | chr8.4:124734-124753 | MS.gene43489:CDS | 35.0% | |
TAGTATATTGTCTGCAGAGA+TGG | - | chr8.4:123813-123832 | MS.gene43489:CDS | 35.0% | |
TAGTGTACTTACTCCTAATC+TGG | - | chr8.4:124796-124815 | MS.gene43489:CDS | 35.0% | |
TCAATCCAATTGCGTATGAA+AGG | + | chr8.4:123757-123776 | None:intergenic | 35.0% | |
TCACACATCAAAGGTTTCTT+CGG | - | chr8.4:125105-125124 | MS.gene43489:CDS | 35.0% | |
TCTGCACAAAAAAATGAGAG+AGG | + | chr8.4:123940-123959 | None:intergenic | 35.0% | |
TCTTAAAGCTCAAAGATCAG+AGG | - | chr8.4:124916-124935 | MS.gene43489:CDS | 35.0% | |
TCTTTCATGCATCTCCATTT+GGG | - | chr8.4:124586-124605 | MS.gene43489:CDS | 35.0% | |
TGCAAACCAGAGAATAATGA+TGG | + | chr8.4:123328-123347 | None:intergenic | 35.0% | |
TTACTTTCTTTCTTGCTTGC+TGG | - | chr8.4:123778-123797 | MS.gene43489:CDS | 35.0% | |
! | AGGTCCTACTGAGTTTTTAA+AGG | - | chr8.4:123471-123490 | MS.gene43489:CDS | 35.0% |
! | AGGTCCTTTAAAAACTCAGT+AGG | + | chr8.4:123478-123497 | None:intergenic | 35.0% |
! | ATCATAGTCATAGTAATGGG+AGG | - | chr8.4:123089-123108 | MS.gene43489:CDS | 35.0% |
! | CAACAATAAAGGTGTGGAAT+TGG | + | chr8.4:125197-125216 | None:intergenic | 35.0% |
! | GCTCATTCTTTTGATGTCAA+AGG | - | chr8.4:123283-123302 | MS.gene43489:CDS | 35.0% |
!! | AACTGAACCATTTGAGTTGT+GGG | - | chr8.4:124859-124878 | MS.gene43489:CDS | 35.0% |
!! | ACTTTGGAACAACTTCTTGA+GGG | + | chr8.4:124528-124547 | None:intergenic | 35.0% |
!!! | TCCATTTAACTGCTGCTTTT+AGG | + | chr8.4:124085-124104 | None:intergenic | 35.0% |
AAAAGGTGAGAGAAGTTGTG+TGG | + | chr8.4:123701-123720 | None:intergenic | 40.0% | |
AAACATGTAAACCTGAGGGA+AGG | + | chr8.4:124192-124211 | None:intergenic | 40.0% | |
AAATCTCCTCGAACTGATAG+AGG | + | chr8.4:123592-123611 | None:intergenic | 40.0% | |
AACATGTAAACCTGAGGGAA+GGG | + | chr8.4:124191-124210 | None:intergenic | 40.0% | |
AACTCAAATGGTTCAGTTCC+TGG | + | chr8.4:124857-124876 | None:intergenic | 40.0% | |
AATCTCCTCGAACTGATAGA+GGG | + | chr8.4:123591-123610 | None:intergenic | 40.0% | |
AGAAACCTTTGATGTGTGAG+TGG | + | chr8.4:125104-125123 | None:intergenic | 40.0% | |
AGAAATCAGCTTCAGGTACA+TGG | + | chr8.4:123441-123460 | None:intergenic | 40.0% | |
ATAGATAATGTGGAGAGCAG+TGG | - | chr8.4:125019-125038 | MS.gene43489:CDS | 40.0% | |
ATGAATCATAAGTAGCGCAG+GGG | + | chr8.4:123411-123430 | None:intergenic | 40.0% | |
ATTAGCTACAATTGCACCAC+TGG | + | chr8.4:125264-125283 | None:intergenic | 40.0% | |
ATTGTGATTGGGAGTGGTAT+TGG | - | chr8.4:123178-123197 | MS.gene43489:CDS | 40.0% | |
ATTGTTGATGCTCTTGTACG+AGG | - | chr8.4:124269-124288 | MS.gene43489:intron | 40.0% | |
CATCAAGAACTTGAGCAAGA+GGG | + | chr8.4:123372-123391 | None:intergenic | 40.0% | |
CATGAATCATAAGTAGCGCA+GGG | + | chr8.4:123412-123431 | None:intergenic | 40.0% | |
CGCTACTTATGATTCATGGA+TGG | - | chr8.4:123414-123433 | MS.gene43489:intron | 40.0% | |
CTATCAGTTCGAGGAGATTT+CGG | - | chr8.4:123592-123611 | MS.gene43489:CDS | 40.0% | |
CTGCAAACATGTAAACCTGA+GGG | + | chr8.4:124196-124215 | None:intergenic | 40.0% | |
GATGTAATTGTGATTGGGAG+TGG | - | chr8.4:123172-123191 | MS.gene43489:CDS | 40.0% | |
GATTTCTCTTCAAAGTCACG+TGG | - | chr8.4:124313-124332 | MS.gene43489:intron | 40.0% | |
GCTCAAGTTCTTGATGCTTT+GGG | - | chr8.4:123376-123395 | MS.gene43489:intron | 40.0% | |
GTGTTACATGCTTATCTTCC+AGG | - | chr8.4:124836-124855 | MS.gene43489:CDS | 40.0% | |
GTTGAAAATGACAGAGCCAT+TGG | - | chr8.4:124347-124366 | MS.gene43489:intron | 40.0% | |
TATTCAACATCGAGTGAGCA+GGG | - | chr8.4:124680-124699 | MS.gene43489:CDS | 40.0% | |
TCTCCACAACAATAAAGGTG+TGG | + | chr8.4:125203-125222 | None:intergenic | 40.0% | |
TCTGCAAACATGTAAACCTG+AGG | + | chr8.4:124197-124216 | None:intergenic | 40.0% | |
TGCTCAAGTTCTTGATGCTT+TGG | - | chr8.4:123375-123394 | MS.gene43489:intron | 40.0% | |
TGGAGTCTCCACAACAATAA+AGG | + | chr8.4:125208-125227 | None:intergenic | 40.0% | |
TGTAACACATGTTTCCCAGT+AGG | + | chr8.4:124824-124843 | None:intergenic | 40.0% | |
TGTGAGCAATGCATCAATGT+GGG | - | chr8.4:124486-124505 | MS.gene43489:intron | 40.0% | |
TTGCAGAATGGTACAAACCA+GGG | - | chr8.4:124210-124229 | MS.gene43489:intron | 40.0% | |
TTGTGAGCAATGCATCAATG+TGG | - | chr8.4:124485-124504 | MS.gene43489:intron | 40.0% | |
TTTGCAGAATGGTACAAACC+AGG | - | chr8.4:124209-124228 | MS.gene43489:intron | 40.0% | |
! | AATGATTGCACGTTGATGAG+TGG | + | chr8.4:123871-123890 | None:intergenic | 40.0% |
! | AGTAATGGGAGGATTAGGAA+AGG | - | chr8.4:123100-123119 | MS.gene43489:CDS | 40.0% |
! | GTCATAGTAATGGGAGGATT+AGG | - | chr8.4:123095-123114 | MS.gene43489:CDS | 40.0% |
! | TCAAGAATGGCAGAAGCTTT+TGG | - | chr8.4:123525-123544 | MS.gene43489:CDS | 40.0% |
!! | ACCAGAGAATAATGATGGAC+CGG | + | chr8.4:123323-123342 | None:intergenic | 40.0% |
!! | GAACTGAACCATTTGAGTTG+TGG | - | chr8.4:124858-124877 | MS.gene43489:CDS | 40.0% |
!! | GACTTTGGAACAACTTCTTG+AGG | + | chr8.4:124529-124548 | None:intergenic | 40.0% |
!! | TGATGAGTGGTAATGGCAAT+TGG | + | chr8.4:123858-123877 | None:intergenic | 40.0% |
AAGGACCTTCACAACTATGC+AGG | - | chr8.4:123490-123509 | MS.gene43489:CDS | 45.0% | |
AATACCTGCAGCTCCATCAA+GGG | + | chr8.4:124252-124271 | None:intergenic | 45.0% | |
AATGGGAGGATTAGGAAAGG+TGG | - | chr8.4:123103-123122 | MS.gene43489:CDS | 45.0% | |
AGTCCTTCCCACAACTCAAA+TGG | + | chr8.4:124869-124888 | None:intergenic | 45.0% | |
ATCTCCTCGAACTGATAGAG+GGG | + | chr8.4:123590-123609 | None:intergenic | 45.0% | |
ATGGGAGGATTAGGAAAGGT+GGG | - | chr8.4:123104-123123 | MS.gene43489:CDS | 45.0% | |
ATTGCTCACAACAGCCTTCT+TGG | + | chr8.4:124476-124495 | None:intergenic | 45.0% | |
ATTGGAGTGAAGCTGAGAAG+CGG | - | chr8.4:124365-124384 | MS.gene43489:intron | 45.0% | |
CACATCAAAGGTTTCTTCGG+AGG | - | chr8.4:125108-125127 | MS.gene43489:CDS | 45.0% | |
CCATGAATCATAAGTAGCGC+AGG | + | chr8.4:123413-123432 | None:intergenic | 45.0% | |
CCTCAGCATCAAATCCCAAA+TGG | + | chr8.4:124603-124622 | None:intergenic | 45.0% | |
CCTGCGCTACTTATGATTCA+TGG | - | chr8.4:123410-123429 | MS.gene43489:intron | 45.0% | |
CGTGACAAGAAATCAGCTTC+AGG | + | chr8.4:123448-123467 | None:intergenic | 45.0% | |
CTGAGGACCCATTTGGAAAA+AGG | + | chr8.4:123665-123684 | None:intergenic | 45.0% | |
GAAGTCCACTCACACATCAA+AGG | - | chr8.4:125096-125115 | MS.gene43489:CDS | 45.0% | |
GAGGACTAGAGAAGTTTGGT+GGG | - | chr8.4:124288-124307 | MS.gene43489:intron | 45.0% | |
GCATCAAGAACTTGAGCAAG+AGG | + | chr8.4:123373-123392 | None:intergenic | 45.0% | |
GGAATTGGAGTTGAATGTCC+AGG | + | chr8.4:125182-125201 | None:intergenic | 45.0% | |
GTACGAGGACTAGAGAAGTT+TGG | - | chr8.4:124284-124303 | MS.gene43489:intron | 45.0% | |
GTATTCAACATCGAGTGAGC+AGG | - | chr8.4:124679-124698 | MS.gene43489:CDS | 45.0% | |
GTCCTGAAGCTGTTCAAGAA+TGG | - | chr8.4:123512-123531 | MS.gene43489:CDS | 45.0% | |
TATGGACCAGCTATACAAGC+TGG | - | chr8.4:125143-125162 | MS.gene43489:CDS | 45.0% | |
TCCAATTGCATCAAGCAGCT+GGG | + | chr8.4:125312-125331 | None:intergenic | 45.0% | |
TCCGGTCCATCATTATTCTC+TGG | - | chr8.4:123319-123338 | MS.gene43489:CDS | 45.0% | |
TCTGTACCAGCTTGTATAGC+TGG | + | chr8.4:125152-125171 | None:intergenic | 45.0% | |
TGCAGAATGGTACAAACCAG+GGG | - | chr8.4:124211-124230 | MS.gene43489:intron | 45.0% | |
TGCCATTCTTGAACAGCTTC+AGG | + | chr8.4:123517-123536 | None:intergenic | 45.0% | |
TGGAGTTGAATGTCCAGGAA+AGG | + | chr8.4:125177-125196 | None:intergenic | 45.0% | |
TTCCAATTGCATCAAGCAGC+TGG | + | chr8.4:125313-125332 | None:intergenic | 45.0% | |
! | CCATTTGGGATTTGATGCTG+AGG | - | chr8.4:124600-124619 | MS.gene43489:CDS | 45.0% |
! | CTTTTTCCAAATGGGTCCTC+AGG | - | chr8.4:123663-123682 | MS.gene43489:CDS | 45.0% |
! | GCTGATTTCTTGTCACGCAT+AGG | - | chr8.4:123451-123470 | MS.gene43489:CDS | 45.0% |
! | TGCACGTTGATGAGTGGTAA+TGG | + | chr8.4:123865-123884 | None:intergenic | 45.0% |
! | TTCTCTGGTTTGCAGTCAAG+AGG | - | chr8.4:123334-123353 | MS.gene43489:CDS | 45.0% |
! | TTGATGCTGAGGTGAGGTTT+TGG | - | chr8.4:124611-124630 | MS.gene43489:CDS | 45.0% |
!! | GAACCATTTGAGTTGTGGGA+AGG | - | chr8.4:124863-124882 | MS.gene43489:CDS | 45.0% |
ACTCCTAATCTGGCACCTAC+TGG | - | chr8.4:124806-124825 | MS.gene43489:CDS | 50.0% | |
ACTGAGTTGTGCAGCACTGT+TGG | - | chr8.4:123204-123223 | MS.gene43489:CDS | 50.0% | |
AGCCATTGCAGCTGTAGACA+AGG | + | chr8.4:123563-123582 | None:intergenic | 50.0% | |
AGGTGCATATCTAGCAGCAG+CGG | + | chr8.4:123629-123648 | None:intergenic | 50.0% | |
AGGTTTCTTCGGAGGAACAG+AGG | - | chr8.4:125116-125135 | MS.gene43489:CDS | 50.0% | |
ATACCTGCAGCTCCATCAAG+GGG | + | chr8.4:124251-124270 | None:intergenic | 50.0% | |
ATCATAAGTAGCGCAGGGGA+CGG | + | chr8.4:123407-123426 | None:intergenic | 50.0% | |
CAATACCTGCAGCTCCATCA+AGG | + | chr8.4:124253-124272 | None:intergenic | 50.0% | |
CAGGACCTGCATAGTTGTGA+AGG | + | chr8.4:123498-123517 | None:intergenic | 50.0% | |
CATTTCTCCCTGCTGAATCC+TGG | + | chr8.4:125059-125078 | None:intergenic | 50.0% | |
CGAGGACTAGAGAAGTTTGG+TGG | - | chr8.4:124287-124306 | MS.gene43489:intron | 50.0% | |
CGGAGGAACAGAGGAACATA+TGG | - | chr8.4:125125-125144 | MS.gene43489:CDS | 50.0% | |
CTCCTAATCTGGCACCTACT+GGG | - | chr8.4:124807-124826 | MS.gene43489:CDS | 50.0% | |
GATTAGGAAAGGTGGGGTTG+TGG | - | chr8.4:123111-123130 | MS.gene43489:CDS | 50.0% | |
GCAGAATGGTACAAACCAGG+GGG | - | chr8.4:124212-124231 | MS.gene43489:intron | 50.0% | |
GCAGTTCGTACATGCCAAGA+AGG | - | chr8.4:124459-124478 | MS.gene43489:intron | 50.0% | |
GCCATTGCAGCTGTAGACAA+GGG | + | chr8.4:123562-123581 | None:intergenic | 50.0% | |
GCTGGTACAGATACCTTTCC+TGG | - | chr8.4:125161-125180 | MS.gene43489:CDS | 50.0% | |
GCTTCTCAGCTTCACTCCAA+TGG | + | chr8.4:124366-124385 | None:intergenic | 50.0% | |
TCCCAGCTGCTTGATGCAAT+TGG | - | chr8.4:125308-125327 | MS.gene43489:CDS | 50.0% | |
TCCCTTGTCTACAGCTGCAA+TGG | - | chr8.4:123558-123577 | MS.gene43489:CDS | 50.0% | |
TCTCCTCGAACTGATAGAGG+GGG | + | chr8.4:123589-123608 | None:intergenic | 50.0% | |
TGGGAGGATTAGGAAAGGTG+GGG | - | chr8.4:123105-123124 | MS.gene43489:CDS | 50.0% | |
TGGGATTTGATGCTGAGGTG+AGG | - | chr8.4:124605-124624 | MS.gene43489:CDS | 50.0% | |
TGTCTTGAGTACCCCCTTGA+TGG | - | chr8.4:124236-124255 | MS.gene43489:intron | 50.0% | |
TTCCCAGTAGGTGCCAGATT+AGG | + | chr8.4:124812-124831 | None:intergenic | 50.0% | |
TTTGCAGTCAAGAGGTCCAC+AGG | - | chr8.4:123342-123361 | MS.gene43489:intron | 50.0% | |
! | GACTAGAGAAGTTTGGTGGG+CGG | - | chr8.4:124291-124310 | MS.gene43489:intron | 50.0% |
! | GTGATTGGGAGTGGTATTGG+TGG | - | chr8.4:123181-123200 | MS.gene43489:CDS | 50.0% |
!! | GACTCCACTTTTCCTGGCAT+TGG | - | chr8.4:125221-125240 | MS.gene43489:CDS | 50.0% |
!! | TGTGGAGACTCCACTTTTCC+TGG | - | chr8.4:125215-125234 | MS.gene43489:CDS | 50.0% |
AATGAGCAGCACCTCCAGCA+TGG | + | chr8.4:123270-123289 | None:intergenic | 55.0% | |
AGAGCAGTGGAGAGAGCAGT+GGG | - | chr8.4:125032-125051 | MS.gene43489:CDS | 55.0% | |
AGTGGGACCAGGATTCAGCA+GGG | - | chr8.4:125049-125068 | MS.gene43489:CDS | 55.0% | |
CAGGGTATACGCAGCGATCT+AGG | - | chr8.4:124698-124717 | MS.gene43489:CDS | 55.0% | |
CTTCCCCCTCTATCAGTTCG+AGG | - | chr8.4:123583-123602 | MS.gene43489:CDS | 55.0% | |
GACGCCAATGCCAGGAAAAG+TGG | + | chr8.4:125228-125247 | None:intergenic | 55.0% | |
TACCTGCAGCTCCATCAAGG+GGG | + | chr8.4:124250-124269 | None:intergenic | 55.0% | |
TTCGAAAGCCACGACCATGC+TGG | - | chr8.4:123253-123272 | MS.gene43489:CDS | 55.0% | |
!! | TGAGCAAGAGGGTTAGCCTG+TGG | + | chr8.4:123361-123380 | None:intergenic | 55.0% |
CACCACTGGCAGCAACTGCA+GGG | + | chr8.4:125250-125269 | None:intergenic | 60.0% | |
CAGTGGGACCAGGATTCAGC+AGG | - | chr8.4:125048-125067 | MS.gene43489:CDS | 60.0% | |
CAGTTGCTCTCCCTTCCCTC+AGG | - | chr8.4:124178-124197 | MS.gene43489:intron | 60.0% | |
GAAAGCCACGACCATGCTGG+AGG | - | chr8.4:123256-123275 | MS.gene43489:CDS | 60.0% | |
GAGAGCAGTGGAGAGAGCAG+TGG | - | chr8.4:125031-125050 | MS.gene43489:CDS | 60.0% | |
GAGCAGCCTGAGGACCCATT+TGG | + | chr8.4:123672-123691 | None:intergenic | 60.0% | |
GTGGAACGAAGAGCAGCCTG+AGG | + | chr8.4:123682-123701 | None:intergenic | 60.0% | |
TACCCCCTTGATGGAGCTGC+AGG | - | chr8.4:124245-124264 | MS.gene43489:intron | 60.0% | |
ACTGCAGGGACGCCAATGCC+AGG | + | chr8.4:125236-125255 | None:intergenic | 65.0% | |
CAGCACCTCCAGCATGGTCG+TGG | + | chr8.4:123264-123283 | None:intergenic | 65.0% | |
GCACCACTGGCAGCAACTGC+AGG | + | chr8.4:125251-125270 | None:intergenic | 65.0% | |
GGGTACTCAAGACAGCCCCC+TGG | + | chr8.4:124230-124249 | None:intergenic | 65.0% | |
GTCCCTGCAGTTGCTGCCAG+TGG | - | chr8.4:125245-125264 | MS.gene43489:CDS | 65.0% | |
GTGGAGAGAGCAGTGGGACC+AGG | - | chr8.4:125038-125057 | MS.gene43489:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 123046 | 125337 | 123046 | ID=MS.gene43489 |
chr8.4 | mRNA | 123046 | 125337 | 123046 | ID=MS.gene43489.t1;Parent=MS.gene43489 |
chr8.4 | exon | 124549 | 125337 | 124549 | ID=MS.gene43489.t1.exon1;Parent=MS.gene43489.t1 |
chr8.4 | CDS | 124549 | 125337 | 124549 | ID=cds.MS.gene43489.t1;Parent=MS.gene43489.t1 |
chr8.4 | exon | 123992 | 124183 | 123992 | ID=MS.gene43489.t1.exon2;Parent=MS.gene43489.t1 |
chr8.4 | CDS | 123992 | 124183 | 123992 | ID=cds.MS.gene43489.t1;Parent=MS.gene43489.t1 |
chr8.4 | exon | 123762 | 123920 | 123762 | ID=MS.gene43489.t1.exon3;Parent=MS.gene43489.t1 |
chr8.4 | CDS | 123762 | 123920 | 123762 | ID=cds.MS.gene43489.t1;Parent=MS.gene43489.t1 |
chr8.4 | exon | 123446 | 123682 | 123446 | ID=MS.gene43489.t1.exon4;Parent=MS.gene43489.t1 |
chr8.4 | CDS | 123446 | 123682 | 123446 | ID=cds.MS.gene43489.t1;Parent=MS.gene43489.t1 |
chr8.4 | exon | 123046 | 123360 | 123046 | ID=MS.gene43489.t1.exon5;Parent=MS.gene43489.t1 |
chr8.4 | CDS | 123046 | 123360 | 123046 | ID=cds.MS.gene43489.t1;Parent=MS.gene43489.t1 |
Gene Sequence |
Protein sequence |