Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035599.t1 | XP_003610309.1 | 95.1 | 635 | 27 | 2 | 1 | 635 | 1 | 631 | 4.10E-306 | 1060.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035599.t1 | Q54ZR7 | 44.9 | 646 | 312 | 11 | 1 | 634 | 1 | 614 | 1.9e-110 | 401.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035599.t1 | G7JGN9 | 95.1 | 635 | 27 | 2 | 1 | 635 | 1 | 631 | 3.0e-306 | 1060.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene035599 | MS.gene012490 | PPI |
MS.gene035599 | MS.gene44056 | PPI |
MS.gene035599 | MS.gene91547 | PPI |
MS.gene035599 | MS.gene005189 | PPI |
MS.gene035599 | MS.gene73119 | PPI |
MS.gene035599 | MS.gene52620 | PPI |
MS.gene035599 | MS.gene035805 | PPI |
MS.gene035599 | MS.gene40741 | PPI |
MS.gene035599 | MS.gene035629 | PPI |
MS.gene035599 | MS.gene064542 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035599.t1 | MTR_4g130770 | 97.953 | 635 | 9 | 2 | 1 | 635 | 1 | 631 | 0.0 | 1264 |
MS.gene035599.t1 | MTR_4g010050 | 30.962 | 239 | 147 | 3 | 396 | 634 | 75 | 295 | 1.08e-30 | 126 |
MS.gene035599.t1 | MTR_7g104890 | 34.536 | 194 | 116 | 2 | 429 | 622 | 33 | 215 | 3.26e-30 | 124 |
MS.gene035599.t1 | MTR_7g104890 | 28.082 | 292 | 192 | 4 | 331 | 622 | 75 | 348 | 7.55e-30 | 124 |
MS.gene035599.t1 | MTR_2g104050 | 30.544 | 239 | 148 | 3 | 396 | 634 | 75 | 295 | 1.47e-29 | 122 |
MS.gene035599.t1 | MTR_8g032340 | 27.517 | 298 | 185 | 8 | 347 | 634 | 94 | 370 | 4.27e-19 | 90.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035599.t1 | AT4G30600 | 75.422 | 651 | 127 | 14 | 1 | 635 | 1 | 634 | 0.0 | 887 |
MS.gene035599.t1 | AT4G30600 | 75.422 | 651 | 127 | 14 | 1 | 635 | 1 | 634 | 0.0 | 887 |
MS.gene035599.t1 | AT1G48900 | 26.797 | 306 | 206 | 3 | 329 | 634 | 8 | 295 | 4.04e-32 | 129 |
MS.gene035599.t1 | AT1G48900 | 26.797 | 306 | 206 | 3 | 329 | 634 | 8 | 295 | 5.66e-32 | 130 |
MS.gene035599.t1 | AT5G03940 | 28.571 | 294 | 192 | 4 | 329 | 622 | 83 | 358 | 6.80e-32 | 130 |
MS.gene035599.t1 | AT1G15310 | 28.727 | 275 | 178 | 3 | 360 | 634 | 39 | 295 | 1.29e-31 | 129 |
MS.gene035599.t1 | AT2G45770 | 29.667 | 300 | 180 | 8 | 343 | 634 | 89 | 365 | 4.21e-27 | 114 |
MS.gene035599.t1 | AT5G49500 | 24.351 | 308 | 213 | 4 | 329 | 634 | 8 | 297 | 2.22e-23 | 104 |
MS.gene035599.t1 | AT5G49500 | 29.480 | 173 | 111 | 2 | 462 | 634 | 14 | 175 | 5.81e-20 | 92.8 |
Find 144 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTTTCATCCTTTCATTTA+AGG | 0.135782 | 8.1:+2771525 | None:intergenic |
GGATAGGAAGGTTGATTATT+TGG | 0.186314 | 8.1:-2774869 | MS.gene035599:CDS |
CTTTCAATGGTTTACATATC+TGG | 0.196127 | 8.1:-2771629 | MS.gene035599:CDS |
TGATTATGCAGGTTGCTTAC+TGG | 0.239203 | 8.1:-2773305 | MS.gene035599:intron |
GTTGGTAATGTTAGTGTAAA+TGG | 0.240516 | 8.1:-2775108 | MS.gene035599:CDS |
CATAACCCTTCTCAAATATA+GGG | 0.264100 | 8.1:+2773102 | None:intergenic |
TCATAACCCTTCTCAAATAT+AGG | 0.269160 | 8.1:+2773101 | None:intergenic |
CTCTGGTCATGCAATGAAAT+TGG | 0.273870 | 8.1:-2775663 | MS.gene035599:CDS |
GTTGTATTTGTTGGAGTTAA+TGG | 0.282982 | 8.1:-2773450 | MS.gene035599:CDS |
CTTTATTCCTAACCTTCTTC+TGG | 0.284805 | 8.1:+2775037 | None:intergenic |
TATTGCTGGGAAGGCCAATT+TGG | 0.285068 | 8.1:-2773958 | MS.gene035599:CDS |
GACTCATGCACGCAGGCTTC+AGG | 0.306590 | 8.1:-2773208 | MS.gene035599:intron |
CCATATGTTGTTGTATTTGT+TGG | 0.324829 | 8.1:-2773459 | MS.gene035599:CDS |
CCTGACCTGGTCTTATTTGT+TGG | 0.326012 | 8.1:-2772243 | MS.gene035599:CDS |
CAAGTCCGACTTCTCCAAAT+TGG | 0.330709 | 8.1:+2773944 | None:intergenic |
ATTCTTGTGCTCAGTATTGC+TGG | 0.340703 | 8.1:-2773972 | MS.gene035599:intron |
AACCAAGGCTGAGCCGAAAA+AGG | 0.357649 | 8.1:-2774983 | MS.gene035599:CDS |
CAAGATCCCATCAATCAATC+TGG | 0.383740 | 8.1:+2772034 | None:intergenic |
GAGTTTCTTGAGGTCGGTAT+AGG | 0.387081 | 8.1:+2771574 | None:intergenic |
CAGAAGAAGGTTAGGAATAA+AGG | 0.388438 | 8.1:-2775036 | MS.gene035599:CDS |
ACGGATCATGTTGATGTTGA+TGG | 0.394256 | 8.1:-2774904 | MS.gene035599:CDS |
GGTGGGAGCTGCACTTTCAA+TGG | 0.401497 | 8.1:-2771642 | MS.gene035599:CDS |
CGGTGGTTGTAGGTGGGAAT+AGG | 0.404012 | 8.1:-2775311 | MS.gene035599:CDS |
TTTGACAGTGCTCTCATCAA+TGG | 0.412182 | 8.1:+2772285 | None:intergenic |
ATAAATACATACCACATTCT+TGG | 0.414415 | 8.1:+2773884 | None:intergenic |
TCCTTCAGAGCTTTCAAAGC+TGG | 0.420133 | 8.1:+2773918 | None:intergenic |
TTGAGGAGTAACGGTGTTGT+TGG | 0.422921 | 8.1:-2775126 | MS.gene035599:CDS |
CCAACAAATACAACAACATA+TGG | 0.423685 | 8.1:+2773459 | None:intergenic |
GCCAGTGCTGGTGGTGGTGG+CGG | 0.424543 | 8.1:-2775240 | MS.gene035599:CDS |
AAATCTAATTTAGTTTCAAC+GGG | 0.426379 | 8.1:+2774928 | None:intergenic |
TGTGGCAAAAGAAGCAATTC+AGG | 0.429961 | 8.1:-2773063 | MS.gene035599:CDS |
TGTTGATGGGGATGCGGATA+AGG | 0.434408 | 8.1:-2774890 | MS.gene035599:CDS |
TAGTGACAGTGAGGATGAAG+AGG | 0.435461 | 8.1:-2774800 | MS.gene035599:CDS |
CAATTTGGAGAAGTCGGACT+TGG | 0.441725 | 8.1:-2773943 | MS.gene035599:CDS |
AAATCGAATCCGGTGGTTGT+AGG | 0.450153 | 8.1:-2775321 | MS.gene035599:CDS |
GTTCGACACTATTGATGATA+AGG | 0.450965 | 8.1:-2772003 | MS.gene035599:intron |
AATGCCAGTGCTGGTGGTGG+TGG | 0.452714 | 8.1:-2775243 | MS.gene035599:CDS |
ACCGCCACCACCACCAGCAC+TGG | 0.454509 | 8.1:+2775239 | None:intergenic |
CGTTCTGTTATTGTGAATAA+CGG | 0.459586 | 8.1:-2775162 | MS.gene035599:CDS |
GGAAGCTTCACGGAATGGTT+CGG | 0.463640 | 8.1:-2773042 | MS.gene035599:CDS |
ATAGGCTCCAGAAGAAGGTT+AGG | 0.465195 | 8.1:-2775044 | MS.gene035599:CDS |
AGTGCTGGTGGTGGTGGCGG+TGG | 0.465276 | 8.1:-2775237 | MS.gene035599:CDS |
AAAATCTAATTTAGTTTCAA+CGG | 0.465883 | 8.1:+2774927 | None:intergenic |
GGCGTTCTATTGACATATTG+AGG | 0.470946 | 8.1:-2773512 | MS.gene035599:CDS |
CAAGAGGAGGATTAATCCTC+TGG | 0.471238 | 8.1:-2775680 | MS.gene035599:CDS |
CCTACACCCAGATTGATTGA+TGG | 0.472241 | 8.1:-2772041 | MS.gene035599:CDS |
CGGATCATGTTGATGTTGAT+GGG | 0.473173 | 8.1:-2774903 | MS.gene035599:CDS |
GAAGGTTGATTATTTGGCTA+AGG | 0.473509 | 8.1:-2774863 | MS.gene035599:CDS |
TGGAGCTCCAGTCATGTTTG+TGG | 0.474210 | 8.1:-2771609 | MS.gene035599:CDS |
CCAACAAATAAGACCAGGTC+AGG | 0.474859 | 8.1:+2772243 | None:intergenic |
TTTGTTGGAGTTAATGGAGT+TGG | 0.477015 | 8.1:-2773444 | MS.gene035599:CDS |
TGGAAGGGAGATGGATCTGA+TGG | 0.483093 | 8.1:-2775273 | MS.gene035599:CDS |
AAGGATATCTTCCACAGTGC+AGG | 0.486091 | 8.1:-2773678 | MS.gene035599:intron |
AAAATCTCGATACACGGTTC+TGG | 0.486570 | 8.1:+2775401 | None:intergenic |
GAGCTGCTTATTCTCTCAAA+TGG | 0.492519 | 8.1:-2775545 | MS.gene035599:CDS |
CTTATTTGTTGGAGAAGCAC+TGG | 0.493495 | 8.1:-2772232 | MS.gene035599:CDS |
GCTTGTGATACATTTCGATC+AGG | 0.496091 | 8.1:-2773249 | MS.gene035599:CDS |
GTTAGGAATAAAGGCGGGAA+TGG | 0.496788 | 8.1:-2775027 | MS.gene035599:CDS |
TGTAAATAGGCTCCAGAAGA+AGG | 0.499134 | 8.1:-2775049 | MS.gene035599:CDS |
ATCTCGATACACGGTTCTGG+TGG | 0.501240 | 8.1:+2775404 | None:intergenic |
TGTGCTCAGTATTGCTGGGA+AGG | 0.505470 | 8.1:-2773967 | MS.gene035599:intron |
GCGTTCTATTGACATATTGA+GGG | 0.507989 | 8.1:-2773511 | MS.gene035599:CDS |
AGACCAGGTCAGGATTGTTA+AGG | 0.512658 | 8.1:+2772253 | None:intergenic |
TTCTTGTGCTCAGTATTGCT+GGG | 0.513106 | 8.1:-2773971 | MS.gene035599:intron |
TCAGTGGCAGCAAGTCTTGA+AGG | 0.514318 | 8.1:-2773722 | MS.gene035599:CDS |
CTATTCCCACCTACAACCAC+CGG | 0.515311 | 8.1:+2775312 | None:intergenic |
CCAGTCATGTTTGTGGGATG+CGG | 0.515363 | 8.1:-2771602 | MS.gene035599:CDS |
ATGGGGATGCGGATAAGGAT+AGG | 0.516473 | 8.1:-2774885 | MS.gene035599:CDS |
TCAGATCCCTATATTTGAGA+AGG | 0.520704 | 8.1:-2773108 | MS.gene035599:intron |
CTACACCCAGATTGATTGAT+GGG | 0.521118 | 8.1:-2772040 | MS.gene035599:CDS |
ACGGTAACGGTTATAATTTG+AGG | 0.521482 | 8.1:-2775143 | MS.gene035599:CDS |
CAGGAGCTGTTGAGCAGTTG+CGG | 0.524608 | 8.1:-2773230 | MS.gene035599:CDS |
GAAATTGGCAACGCTTTGAA+AGG | 0.527215 | 8.1:-2775648 | MS.gene035599:CDS |
GGAGCTCCAGTCATGTTTGT+GGG | 0.528002 | 8.1:-2771608 | MS.gene035599:CDS |
CAGATCCCTATATTTGAGAA+GGG | 0.528857 | 8.1:-2773107 | MS.gene035599:CDS |
GACGTTGAGTTTCTTGAGGT+CGG | 0.531116 | 8.1:+2771568 | None:intergenic |
AAGCAATTCAGGAAGCTTCA+CGG | 0.533244 | 8.1:-2773052 | MS.gene035599:CDS |
GGCGGCAATGGAAGACGCAC+TGG | 0.534128 | 8.1:-2773553 | MS.gene035599:CDS |
CGACACAGCTGGTCGTATGC+AGG | 0.535402 | 8.1:-2773006 | MS.gene035599:intron |
ATTCAGGAAGCTTCACGGAA+TGG | 0.540152 | 8.1:-2773047 | MS.gene035599:CDS |
GGAACAAGGTGAGAGTATGA+TGG | 0.543614 | 8.1:-2774842 | MS.gene035599:CDS |
TCGAATCCGGTGGTTGTAGG+TGG | 0.545919 | 8.1:-2775318 | MS.gene035599:CDS |
GATTCGATCTTGTCTTCTAG+AGG | 0.546611 | 8.1:-2775607 | MS.gene035599:CDS |
CAGGTCACATGGAAGGGAGA+TGG | 0.546721 | 8.1:-2775282 | MS.gene035599:CDS |
TGTCTTCTAGAGGAGCGATC+TGG | 0.547527 | 8.1:-2775597 | MS.gene035599:CDS |
GGATTTGAAGAAATCGAATC+CGG | 0.550640 | 8.1:-2775331 | MS.gene035599:CDS |
CAATCTGGGTGTAGGAGATG+TGG | 0.553386 | 8.1:+2772049 | None:intergenic |
AAAATCTACTAATCTTGCTA+AGG | 0.553829 | 8.1:-2773421 | MS.gene035599:intron |
CCGCATCCCACAAACATGAC+TGG | 0.559796 | 8.1:+2771602 | None:intergenic |
ACCAGCTTTGAAAGCTCTGA+AGG | 0.559926 | 8.1:-2773919 | MS.gene035599:CDS |
TTGAGAGAATAAGCAGCTCC+AGG | 0.560375 | 8.1:+2775549 | None:intergenic |
AAACAGCAGGTCACATGGAA+GGG | 0.561061 | 8.1:-2775288 | MS.gene035599:CDS |
GATTATTTGGCTAAGGAACA+AGG | 0.566749 | 8.1:-2774856 | MS.gene035599:CDS |
GAAACAGCAGGTCACATGGA+AGG | 0.569230 | 8.1:-2775289 | MS.gene035599:CDS |
GTTATTGTGAATAACGGTAA+CGG | 0.570694 | 8.1:-2775156 | MS.gene035599:CDS |
CAATTTCATTGCATGACCAG+AGG | 0.575171 | 8.1:+2775664 | None:intergenic |
GCAGTTGAAGATTGAAGCTG+AGG | 0.579144 | 8.1:-2775364 | MS.gene035599:CDS |
AAGATCCCATCAATCAATCT+GGG | 0.579799 | 8.1:+2772035 | None:intergenic |
CCATCAATCAATCTGGGTGT+AGG | 0.581937 | 8.1:+2772041 | None:intergenic |
GGATGCGGATAAGGATAGGA+AGG | 0.582099 | 8.1:-2774881 | MS.gene035599:CDS |
TGAAGCTGAGGCTCGTTCTG+AGG | 0.584141 | 8.1:-2775352 | MS.gene035599:CDS |
ACTTGACGTTGAGTTTCTTG+AGG | 0.584980 | 8.1:+2771564 | None:intergenic |
GGGAAGAAGAATGCCAGTGC+TGG | 0.586484 | 8.1:-2775252 | MS.gene035599:CDS |
CTGATCAAAATCTCGATACA+CGG | 0.587720 | 8.1:+2775395 | None:intergenic |
CTACCTTAACAATCCTGACC+TGG | 0.587728 | 8.1:-2772256 | MS.gene035599:CDS |
TTTGTTGGAGAAGCACTGGT+TGG | 0.588986 | 8.1:-2772228 | MS.gene035599:CDS |
GGTTATAATTTGAGGAGTAA+CGG | 0.590987 | 8.1:-2775135 | MS.gene035599:CDS |
GTTTGAAGAATGACGGTGAT+GGG | 0.596520 | 8.1:-2775215 | MS.gene035599:CDS |
TGTTAAGCGTGAATTCTCGC+AGG | 0.597191 | 8.1:-2775436 | MS.gene035599:CDS |
TTTAAGGAGCGTCTTCACAA+TGG | 0.598414 | 8.1:+2771541 | None:intergenic |
CGAATCCGGTGGTTGTAGGT+GGG | 0.598863 | 8.1:-2775317 | MS.gene035599:CDS |
ATAGGAAACAGCAGGTCACA+TGG | 0.602479 | 8.1:-2775293 | MS.gene035599:CDS |
AGGTGGGAATAGGAAACAGC+AGG | 0.603318 | 8.1:-2775301 | MS.gene035599:CDS |
AATTCTGCATCTGCTCTATG+TGG | 0.603688 | 8.1:-2775475 | MS.gene035599:CDS |
TTCATGCTGCAAAAGAGCAA+AGG | 0.608654 | 8.1:-2773485 | MS.gene035599:CDS |
ACACAATGTTAATGTCATGA+TGG | 0.611925 | 8.1:-2773274 | MS.gene035599:CDS |
GAGAATGATAGTGTAAACAA+TGG | 0.612652 | 8.1:-2775081 | MS.gene035599:CDS |
GATCGAATCAATGTATCGAT+CGG | 0.617091 | 8.1:+2775621 | None:intergenic |
CTTCTCCAACAAATAAGACC+AGG | 0.622372 | 8.1:+2772238 | None:intergenic |
TGAGAAGCTATGTGAATCAG+TGG | 0.623505 | 8.1:-2773738 | MS.gene035599:CDS |
GTTGTGCTAGTCGACACAGC+TGG | 0.625758 | 8.1:-2773017 | MS.gene035599:CDS |
TCTTACAATTACGATGCACC+TGG | 0.626789 | 8.1:-2775567 | MS.gene035599:CDS |
TCTCGATACACGGTTCTGGT+GGG | 0.628791 | 8.1:+2775405 | None:intergenic |
AACAGACGCTGTTGTAACCA+AGG | 0.629920 | 8.1:-2774998 | MS.gene035599:CDS |
AAGAATGCCAGTGCTGGTGG+TGG | 0.631319 | 8.1:-2775246 | MS.gene035599:CDS |
TGTTGATGTTGATGGGGATG+CGG | 0.631820 | 8.1:-2774896 | MS.gene035599:CDS |
GGAAGGGAGATGGATCTGAT+GGG | 0.633548 | 8.1:-2775272 | MS.gene035599:CDS |
GAAGGCCAATTTGGAGAAGT+CGG | 0.633774 | 8.1:-2773949 | MS.gene035599:CDS |
GGTTTGAAGAATGACGGTGA+TGG | 0.634038 | 8.1:-2775216 | MS.gene035599:CDS |
AGAAGGTTAGGAATAAAGGC+GGG | 0.636662 | 8.1:-2775032 | MS.gene035599:CDS |
CGTTATTCACAATAACAGAA+CGG | 0.639458 | 8.1:+2775163 | None:intergenic |
GGCGGTGGTTTGAAGAATGA+CGG | 0.640321 | 8.1:-2775222 | MS.gene035599:CDS |
TCAGCTTTCAAAGTTCAACC+AGG | 0.642481 | 8.1:-2772190 | MS.gene035599:intron |
AAGAAGAATGCCAGTGCTGG+TGG | 0.643037 | 8.1:-2775249 | MS.gene035599:CDS |
TGGGTGTAGGAGATGTGGAA+AGG | 0.654736 | 8.1:+2772054 | None:intergenic |
TAGACTCATGACCAAGAATG+TGG | 0.655583 | 8.1:-2773895 | MS.gene035599:intron |
AGTTGCGGACTCATGCACGC+AGG | 0.656119 | 8.1:-2773215 | MS.gene035599:CDS |
GGATCATGTTGATGTTGATG+GGG | 0.663445 | 8.1:-2774902 | MS.gene035599:CDS |
ATGATGATGATGATAATGCT+GGG | 0.668563 | 8.1:-2774774 | MS.gene035599:CDS |
TTTGAAGAAATCGAATCCGG+TGG | 0.670497 | 8.1:-2775328 | MS.gene035599:CDS |
TCTAGAGGAGCGATCTGGTG+CGG | 0.676914 | 8.1:-2775592 | MS.gene035599:CDS |
AAGAAGGTTAGGAATAAAGG+CGG | 0.679488 | 8.1:-2775033 | MS.gene035599:CDS |
AATATGTCAATAGAACGCCT+AGG | 0.693947 | 8.1:+2773516 | None:intergenic |
TAGAAACCAAACCTGCACTG+TGG | 0.728001 | 8.1:+2773667 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAATTGTATATAAATAAA+AGG | + | chr8.1:2773631-2773650 | None:intergenic | 10.0% |
!!! | AAAAATTTATTGATTTTATG+GGG | - | chr8.1:2774285-2774304 | MS.gene035599:intron | 10.0% |
!!! | CAAAAATTTATTGATTTTAT+GGG | - | chr8.1:2774284-2774303 | MS.gene035599:intron | 10.0% |
!! | ATAAATTAAATTGTTACTCT+TGG | - | chr8.1:2773003-2773022 | MS.gene035599:intron | 15.0% |
!! | ATTGTATATAAATAAAAGGT+CGG | + | chr8.1:2773627-2773646 | None:intergenic | 15.0% |
!!! | AAAATCTAATTTAGTTTCAA+CGG | + | chr8.1:2772319-2772338 | None:intergenic | 15.0% |
!!! | AAAATTTATTGATTTTATGG+GGG | - | chr8.1:2774286-2774305 | MS.gene035599:intron | 15.0% |
!!! | GCAAAAATTTATTGATTTTA+TGG | - | chr8.1:2774283-2774302 | MS.gene035599:intron | 15.0% |
!!! | TATTTAACTTGTAATGATAT+TGG | - | chr8.1:2772914-2772933 | MS.gene035599:intron | 15.0% |
!!! | TGAAACTAAATTAGATTTTA+CGG | - | chr8.1:2772320-2772339 | MS.gene035599:intron | 15.0% |
!! | AAAAGGTAGTTAAGAAAAAT+AGG | - | chr8.1:2772277-2772296 | MS.gene035599:CDS | 20.0% |
!! | AAAGGTAGTTAAGAAAAATA+GGG | - | chr8.1:2772278-2772297 | MS.gene035599:CDS | 20.0% |
!! | CTATGAATAAGATTTCAATA+AGG | + | chr8.1:2772848-2772867 | None:intergenic | 20.0% |
!! | TAATCATTACCCATATTAAA+TGG | + | chr8.1:2775364-2775383 | None:intergenic | 20.0% |
!! | TATTCTTGATGAACATTTAT+TGG | - | chr8.1:2775318-2775337 | MS.gene035599:CDS | 20.0% |
!! | TCTATTCCAATAAACATAAA+AGG | + | chr8.1:2774815-2774834 | None:intergenic | 20.0% |
!!! | AAACAATAAAAGTATTGTCA+AGG | + | chr8.1:2772766-2772785 | None:intergenic | 20.0% |
!!! | AAATCTAATTTAGTTTCAAC+GGG | + | chr8.1:2772318-2772337 | None:intergenic | 20.0% |
!!! | AATGAACCTTTTATGTTTAT+TGG | - | chr8.1:2774806-2774825 | MS.gene035599:CDS | 20.0% |
!!! | TAATTATGTTTGATTTTGTC+AGG | - | chr8.1:2775580-2775599 | MS.gene035599:CDS | 20.0% |
!!! | TTTTATGTTTATTGGAATAG+AGG | - | chr8.1:2774814-2774833 | MS.gene035599:CDS | 20.0% |
!!! | TTTTTCTTAACTACCTTTTT+CGG | + | chr8.1:2772276-2772295 | None:intergenic | 20.0% |
! | AAAATCTACTAATCTTGCTA+AGG | - | chr8.1:2773822-2773841 | MS.gene035599:intron | 25.0% |
! | AACTAGCAAAGACAAAATAA+AGG | + | chr8.1:2775476-2775495 | None:intergenic | 25.0% |
! | ACTAGCAAAGACAAAATAAA+GGG | + | chr8.1:2775475-2775494 | None:intergenic | 25.0% |
! | AGACAAAAAAATCCAATTCA+AGG | + | chr8.1:2772718-2772737 | None:intergenic | 25.0% |
! | AGTGTTATATTTCCTTGAAT+TGG | - | chr8.1:2772703-2772722 | MS.gene035599:intron | 25.0% |
! | AGTTAAGAAAAATAGGGTTT+GGG | - | chr8.1:2772284-2772303 | MS.gene035599:CDS | 25.0% |
! | AGTTTCTGCAACAAAATAAA+TGG | + | chr8.1:2775163-2775182 | None:intergenic | 25.0% |
! | ATAAATACATACCACATTCT+TGG | + | chr8.1:2773362-2773381 | None:intergenic | 25.0% |
! | CAACTTTGCAAGTAAATTTA+TGG | - | chr8.1:2775282-2775301 | MS.gene035599:CDS | 25.0% |
! | GAATAAGTGCATAAAAGATT+GGG | + | chr8.1:2774539-2774558 | None:intergenic | 25.0% |
! | GTTTCTGCAACAAAATAAAT+GGG | + | chr8.1:2775162-2775181 | None:intergenic | 25.0% |
! | TAAATTTATGGCTAAGCATT+TGG | - | chr8.1:2775294-2775313 | MS.gene035599:CDS | 25.0% |
! | TAAGACATATGTGCATTATT+AGG | - | chr8.1:2772881-2772900 | MS.gene035599:intron | 25.0% |
! | TAGAATGAATGGATATTAAG+TGG | - | chr8.1:2774501-2774520 | MS.gene035599:intron | 25.0% |
! | TAGTTAAGAAAAATAGGGTT+TGG | - | chr8.1:2772283-2772302 | MS.gene035599:CDS | 25.0% |
! | TATGTAAAAATTCCGTATGT+CGG | - | chr8.1:2773875-2773894 | MS.gene035599:intron | 25.0% |
! | TTCGTTAGTCAATATAAAAC+CGG | + | chr8.1:2774372-2774391 | None:intergenic | 25.0% |
!! | AATACTATTGGTTATCTGTT+AGG | - | chr8.1:2774331-2774350 | MS.gene035599:intron | 25.0% |
!!! | ATTTATTTTGTTGCAGAAAC+TGG | - | chr8.1:2775162-2775181 | MS.gene035599:CDS | 25.0% |
!!! | CTGCATTATTTTTCAAAACA+CGG | + | chr8.1:2773671-2773690 | None:intergenic | 25.0% |
!!! | GTTTTATATTGACTAACGAA+AGG | - | chr8.1:2774372-2774391 | MS.gene035599:intron | 25.0% |
!!! | TTACTAACTTCTAGAATGAA+TGG | - | chr8.1:2774490-2774509 | MS.gene035599:intron | 25.0% |
AAAGACAAAATAAAGGGAAG+GGG | + | chr8.1:2775469-2775488 | None:intergenic | 30.0% | |
ACACAATGTTAATGTCATGA+TGG | - | chr8.1:2773969-2773988 | MS.gene035599:intron | 30.0% | |
ACCAAATGACTCAATACTAT+TGG | - | chr8.1:2774319-2774338 | MS.gene035599:intron | 30.0% | |
AGTAACTGTTTCATTCAGTT+AGG | + | chr8.1:2774475-2774494 | None:intergenic | 30.0% | |
ATGATAAGGTATGCAAATAC+TGG | - | chr8.1:2775254-2775273 | MS.gene035599:CDS | 30.0% | |
ATGTAAAAATTCCGTATGTC+GGG | - | chr8.1:2773876-2773895 | MS.gene035599:intron | 30.0% | |
ATTAGAGGTTCCATTTCTTA+AGG | + | chr8.1:2774574-2774593 | None:intergenic | 30.0% | |
CAAAGACAAAATAAAGGGAA+GGG | + | chr8.1:2775470-2775489 | None:intergenic | 30.0% | |
CATAACCCTTCTCAAATATA+GGG | + | chr8.1:2774144-2774163 | None:intergenic | 30.0% | |
CCAACAAATACAACAACATA+TGG | + | chr8.1:2773787-2773806 | None:intergenic | 30.0% | |
CCATATGTTGTTGTATTTGT+TGG | - | chr8.1:2773784-2773803 | MS.gene035599:intron | 30.0% | |
CGTTATTCACAATAACAGAA+CGG | + | chr8.1:2772083-2772102 | None:intergenic | 30.0% | |
CGTTCTGTTATTGTGAATAA+CGG | - | chr8.1:2772081-2772100 | MS.gene035599:intron | 30.0% | |
CTTGATGAACATTTATTGGT+TGG | - | chr8.1:2775322-2775341 | MS.gene035599:CDS | 30.0% | |
CTTTCAATGGTTTACATATC+TGG | - | chr8.1:2775614-2775633 | MS.gene035599:CDS | 30.0% | |
GGAAAATTGTCATAGTTGAA+TGG | - | chr8.1:2774835-2774854 | MS.gene035599:CDS | 30.0% | |
GGAATAAGTGCATAAAAGAT+TGG | + | chr8.1:2774540-2774559 | None:intergenic | 30.0% | |
GGTTATAATTTGAGGAGTAA+CGG | - | chr8.1:2772108-2772127 | MS.gene035599:intron | 30.0% | |
GTTATTGTGAATAACGGTAA+CGG | - | chr8.1:2772087-2772106 | MS.gene035599:intron | 30.0% | |
TAATCAAAGCAACATGTAAG+AGG | + | chr8.1:2773043-2773062 | None:intergenic | 30.0% | |
TAATGATGATTTACTGCAAG+TGG | - | chr8.1:2772792-2772811 | MS.gene035599:intron | 30.0% | |
TATAAAACCGGTATTAATCC+CGG | + | chr8.1:2774360-2774379 | None:intergenic | 30.0% | |
TCAAATATAGGGATCTGAAA+GGG | + | chr8.1:2774133-2774152 | None:intergenic | 30.0% | |
TCATAACCCTTCTCAAATAT+AGG | + | chr8.1:2774145-2774164 | None:intergenic | 30.0% | |
TGAATATATTGAACCTAACC+TGG | + | chr8.1:2775074-2775093 | None:intergenic | 30.0% | |
TTAGAGGTTCCATTTCTTAA+GGG | + | chr8.1:2774573-2774592 | None:intergenic | 30.0% | |
! | AAAAACTGGCTTCATTTACA+AGG | - | chr8.1:2773546-2773565 | MS.gene035599:CDS | 30.0% |
! | ACCAATAGTATTGAGTCATT+TGG | + | chr8.1:2774323-2774342 | None:intergenic | 30.0% |
! | ATGATGATGATGATAATGCT+GGG | - | chr8.1:2772469-2772488 | MS.gene035599:intron | 30.0% |
! | ATGGAGCTTTTGATGTAAAT+AGG | - | chr8.1:2772181-2772200 | MS.gene035599:intron | 30.0% |
! | GAGAATGATAGTGTAAACAA+TGG | - | chr8.1:2772162-2772181 | MS.gene035599:intron | 30.0% |
! | GTTGTATTTGTTGGAGTTAA+TGG | - | chr8.1:2773793-2773812 | MS.gene035599:intron | 30.0% |
! | TTGTCATAGTTGAATGGTTT+TGG | - | chr8.1:2774841-2774860 | MS.gene035599:CDS | 30.0% |
!! | GTTGGTAATGTTAGTGTAAA+TGG | - | chr8.1:2772135-2772154 | MS.gene035599:intron | 30.0% |
!! | TATGTTTGATTTTGTCAGGT+GGG | - | chr8.1:2775584-2775603 | MS.gene035599:CDS | 30.0% |
!! | TTATGTTTGATTTTGTCAGG+TGG | - | chr8.1:2775583-2775602 | MS.gene035599:CDS | 30.0% |
!!! | CGTGTTTTGAAAAATAATGC+AGG | - | chr8.1:2773669-2773688 | MS.gene035599:intron | 30.0% |
!!! | GTTTTGAAAAATAATGCAGG+CGG | - | chr8.1:2773672-2773691 | MS.gene035599:intron | 30.0% |
AAATATAGGGATCTGAAAGG+GGG | + | chr8.1:2774131-2774150 | None:intergenic | 35.0% | |
AACAGAATCCCCTTAAGAAA+TGG | - | chr8.1:2774561-2774580 | MS.gene035599:intron | 35.0% | |
AACATCAATCGGAATCTATG+AGG | + | chr8.1:2772662-2772681 | None:intergenic | 35.0% | |
AACTGTTTCATTCAGTTAGG+CGG | + | chr8.1:2774472-2774491 | None:intergenic | 35.0% | |
AAGAAGGTTAGGAATAAAGG+CGG | - | chr8.1:2772210-2772229 | MS.gene035599:CDS | 35.0% | |
AAGACAAAATAAAGGGAAGG+GGG | + | chr8.1:2775468-2775487 | None:intergenic | 35.0% | |
AAGATCCCATCAATCAATCT+GGG | + | chr8.1:2775211-2775230 | None:intergenic | 35.0% | |
AAGCCTGATGCTAAAAAGAA+GGG | - | chr8.1:2772501-2772520 | MS.gene035599:intron | 35.0% | |
AAGTCTTGAAGGCAAAAAAC+TGG | - | chr8.1:2773532-2773551 | MS.gene035599:CDS | 35.0% | |
AATATGTCAATAGAACGCCT+AGG | + | chr8.1:2773730-2773749 | None:intergenic | 35.0% | |
ATAAAACCGGTATTAATCCC+GGG | + | chr8.1:2774359-2774378 | None:intergenic | 35.0% | |
ATCCTCAACATCATTAGATG+TGG | - | chr8.1:2773380-2773399 | MS.gene035599:intron | 35.0% | |
ATCTGAAAGGGGGAATTATA+AGG | + | chr8.1:2774121-2774140 | None:intergenic | 35.0% | |
ATTCATTCGATGCTTTCTTG+TGG | + | chr8.1:2775404-2775423 | None:intergenic | 35.0% | |
ATTCGTTTGAAAGTCAGGAA+AGG | - | chr8.1:2772938-2772957 | MS.gene035599:intron | 35.0% | |
CAAATATAGGGATCTGAAAG+GGG | + | chr8.1:2774132-2774151 | None:intergenic | 35.0% | |
CAGAAGAAGGTTAGGAATAA+AGG | - | chr8.1:2772207-2772226 | MS.gene035599:CDS | 35.0% | |
CAGATCCCTATATTTGAGAA+GGG | - | chr8.1:2774136-2774155 | MS.gene035599:intron | 35.0% | |
CTATCACTGTTTCAGTTTCT+AGG | - | chr8.1:2774756-2774775 | MS.gene035599:CDS | 35.0% | |
CTCAAATATAGGGATCTGAA+AGG | + | chr8.1:2774134-2774153 | None:intergenic | 35.0% | |
CTGATCAAAATCTCGATACA+CGG | + | chr8.1:2771851-2771870 | None:intergenic | 35.0% | |
CTGCATAATCACACAGAAAA+TGG | + | chr8.1:2773929-2773948 | None:intergenic | 35.0% | |
CTTTATTCCTAACCTTCTTC+TGG | + | chr8.1:2772209-2772228 | None:intergenic | 35.0% | |
GAAAATGGAATATCTCCTTC+AGG | + | chr8.1:2773914-2773933 | None:intergenic | 35.0% | |
GATTATTTGGCTAAGGAACA+AGG | - | chr8.1:2772387-2772406 | MS.gene035599:intron | 35.0% | |
GCAAAGACAAAATAAAGGGA+AGG | + | chr8.1:2775471-2775490 | None:intergenic | 35.0% | |
GCACATATGTCTTAAAGCAA+AGG | + | chr8.1:2772875-2772894 | None:intergenic | 35.0% | |
GCGTTCTATTGACATATTGA+GGG | - | chr8.1:2773732-2773751 | MS.gene035599:CDS | 35.0% | |
GGAGACTGTCCATTTAATAT+GGG | - | chr8.1:2775352-2775371 | MS.gene035599:CDS | 35.0% | |
GGATTTGAAGAAATCGAATC+CGG | - | chr8.1:2771912-2771931 | MS.gene035599:intron | 35.0% | |
GGGTTCAATAACAGACATAT+GGG | + | chr8.1:2775142-2775161 | None:intergenic | 35.0% | |
TAAGTGCATAAAAGATTGGG+AGG | + | chr8.1:2774536-2774555 | None:intergenic | 35.0% | |
TACTAATCTTGCTAAGGTGA+AGG | - | chr8.1:2773828-2773847 | MS.gene035599:intron | 35.0% | |
TAGAGGTTCCATTTCTTAAG+GGG | + | chr8.1:2774572-2774591 | None:intergenic | 35.0% | |
TCAAGCAACACAACATCAAT+CGG | + | chr8.1:2772673-2772692 | None:intergenic | 35.0% | |
TCAATCAAAGTAGCAGATCA+AGG | + | chr8.1:2773159-2773178 | None:intergenic | 35.0% | |
TCACAAGGAAAATGGAAACA+GGG | + | chr8.1:2773093-2773112 | None:intergenic | 35.0% | |
TCAGATCCCTATATTTGAGA+AGG | - | chr8.1:2774135-2774154 | MS.gene035599:intron | 35.0% | |
TGAGATGGAAACAAAATCAG+CGG | + | chr8.1:2775432-2775451 | None:intergenic | 35.0% | |
TGGGTTCAATAACAGACATA+TGG | + | chr8.1:2775143-2775162 | None:intergenic | 35.0% | |
TTCATCTTACATGTCACTGA+TGG | - | chr8.1:2774919-2774938 | MS.gene035599:CDS | 35.0% | |
TTGGTATTCGTTTGAAAGTC+AGG | - | chr8.1:2772933-2772952 | MS.gene035599:intron | 35.0% | |
TTTCAAAGTTCAACCAGGTT+AGG | - | chr8.1:2775058-2775077 | MS.gene035599:CDS | 35.0% | |
TTTCTTAAGGGGATTCTGTT+AGG | + | chr8.1:2774561-2774580 | None:intergenic | 35.0% | |
TTTGTTGGAGTTAATGGAGT+TGG | - | chr8.1:2773799-2773818 | MS.gene035599:intron | 35.0% | |
! | ACGGTAACGGTTATAATTTG+AGG | - | chr8.1:2772100-2772119 | MS.gene035599:intron | 35.0% |
! | CATTTTCTGTGTGATTATGC+AGG | - | chr8.1:2773927-2773946 | MS.gene035599:CDS | 35.0% |
! | GAAGGTTGATTATTTGGCTA+AGG | - | chr8.1:2772380-2772399 | MS.gene035599:intron | 35.0% |
! | GATCGAATCAATGTATCGAT+CGG | + | chr8.1:2771625-2771644 | None:intergenic | 35.0% |
! | GATGATGATGATGATAATGC+TGG | - | chr8.1:2772468-2772487 | MS.gene035599:intron | 35.0% |
! | GGATAGGAAGGTTGATTATT+TGG | - | chr8.1:2772374-2772393 | MS.gene035599:intron | 35.0% |
! | GTTCGACACTATTGATGATA+AGG | - | chr8.1:2775240-2775259 | MS.gene035599:CDS | 35.0% |
! | TCTTTTTCCCTATCGACATT+TGG | - | chr8.1:2773599-2773618 | MS.gene035599:intron | 35.0% |
! | TGAACATTTATTGGTTGGCT+AGG | - | chr8.1:2775327-2775346 | MS.gene035599:CDS | 35.0% |
! | TGGACTTTTCACAATGATCT+AGG | - | chr8.1:2771718-2771737 | MS.gene035599:intron | 35.0% |
! | TGTTTCCATTTTCCTTGTGA+CGG | - | chr8.1:2773093-2773112 | MS.gene035599:CDS | 35.0% |
!! | TTACATTCTGTGTCACTTGT+AGG | - | chr8.1:2773469-2773488 | MS.gene035599:CDS | 35.0% |
!!! | CAGTTACTGATTTTCACAAG+AGG | - | chr8.1:2771547-2771566 | MS.gene035599:CDS | 35.0% |
!!! | GATTTTTAGTAGTGACAGTG+AGG | - | chr8.1:2772434-2772453 | MS.gene035599:intron | 35.0% |
!!! | TGGTTCGTATTTTAACTCCT+AGG | - | chr8.1:2773710-2773729 | MS.gene035599:CDS | 35.0% |
!!! | TTACTGATTTTCACAAGAGG+AGG | - | chr8.1:2771550-2771569 | MS.gene035599:CDS | 35.0% |
AAAAATAATGCAGGCGGCAA+TGG | - | chr8.1:2773678-2773697 | MS.gene035599:intron | 40.0% | |
AAAATCTCGATACACGGTTC+TGG | + | chr8.1:2771845-2771864 | None:intergenic | 40.0% | |
AAATTGAGCCACGCTCTTAT+AGG | - | chr8.1:2774395-2774414 | MS.gene035599:intron | 40.0% | |
AAGCAATTCAGGAAGCTTCA+CGG | - | chr8.1:2774191-2774210 | MS.gene035599:intron | 40.0% | |
AAGTTCAGCAAGTTTACCTC+TGG | + | chr8.1:2772545-2772564 | None:intergenic | 40.0% | |
AATTCTGCATCTGCTCTATG+TGG | - | chr8.1:2771768-2771787 | MS.gene035599:intron | 40.0% | |
ACGGATCATGTTGATGTTGA+TGG | - | chr8.1:2772339-2772358 | MS.gene035599:intron | 40.0% | |
ACTTGACGTTGAGTTTCTTG+AGG | + | chr8.1:2775682-2775701 | None:intergenic | 40.0% | |
AGAAGACTTAAGAGAGCTGA+TGG | + | chr8.1:2774610-2774629 | None:intergenic | 40.0% | |
AGAAGGTTAGGAATAAAGGC+GGG | - | chr8.1:2772211-2772230 | MS.gene035599:CDS | 40.0% | |
AGTAGGATATTCCTCTCTGA+AGG | + | chr8.1:2774449-2774468 | None:intergenic | 40.0% | |
AGTATAGAGTATACCCTCCA+AGG | - | chr8.1:2774663-2774682 | MS.gene035599:intron | 40.0% | |
ATTCTTGTGCTCAGTATTGC+TGG | - | chr8.1:2773271-2773290 | MS.gene035599:CDS | 40.0% | |
CAAGATCCCATCAATCAATC+TGG | + | chr8.1:2775212-2775231 | None:intergenic | 40.0% | |
CAAGCCTGATGCTAAAAAGA+AGG | - | chr8.1:2772500-2772519 | MS.gene035599:intron | 40.0% | |
CAATTTCATTGCATGACCAG+AGG | + | chr8.1:2771582-2771601 | None:intergenic | 40.0% | |
CACCACATCTAATGATGTTG+AGG | + | chr8.1:2773385-2773404 | None:intergenic | 40.0% | |
CGGAGACTGTCCATTTAATA+TGG | - | chr8.1:2775351-2775370 | MS.gene035599:CDS | 40.0% | |
CGGATCATGTTGATGTTGAT+GGG | - | chr8.1:2772340-2772359 | MS.gene035599:intron | 40.0% | |
CTACACCCAGATTGATTGAT+GGG | - | chr8.1:2775203-2775222 | MS.gene035599:CDS | 40.0% | |
CTCAACATCATTAGATGTGG+TGG | - | chr8.1:2773383-2773402 | MS.gene035599:intron | 40.0% | |
CTCTGGTCATGCAATGAAAT+TGG | - | chr8.1:2771580-2771599 | MS.gene035599:CDS | 40.0% | |
CTGATGCTAAAAAGAAGGGT+TGG | - | chr8.1:2772505-2772524 | MS.gene035599:intron | 40.0% | |
CTTCTCCAACAAATAAGACC+AGG | + | chr8.1:2775008-2775027 | None:intergenic | 40.0% | |
GAGCTGCTTATTCTCTCAAA+TGG | - | chr8.1:2771698-2771717 | MS.gene035599:intron | 40.0% | |
GATTCGATCTTGTCTTCTAG+AGG | - | chr8.1:2771636-2771655 | MS.gene035599:CDS | 40.0% | |
GCTTGTGATACATTTCGATC+AGG | - | chr8.1:2773994-2774013 | MS.gene035599:intron | 40.0% | |
GGATCATGTTGATGTTGATG+GGG | - | chr8.1:2772341-2772360 | MS.gene035599:intron | 40.0% | |
GGCGTTCTATTGACATATTG+AGG | - | chr8.1:2773731-2773750 | MS.gene035599:CDS | 40.0% | |
GTACTATCTCATGACAGCAA+AGG | + | chr8.1:2774782-2774801 | None:intergenic | 40.0% | |
GTCACAAGGAAAATGGAAAC+AGG | + | chr8.1:2773094-2773113 | None:intergenic | 40.0% | |
GTTTGAAGAATGACGGTGAT+GGG | - | chr8.1:2772028-2772047 | MS.gene035599:CDS | 40.0% | |
TAAAAAGCAAGCCCGACATA+CGG | + | chr8.1:2773890-2773909 | None:intergenic | 40.0% | |
TAAAAGATTGGGAGGATAGC+TGG | + | chr8.1:2774528-2774547 | None:intergenic | 40.0% | |
TAGACTCATGACCAAGAATG+TGG | - | chr8.1:2773348-2773367 | MS.gene035599:intron | 40.0% | |
TCAGCTTTCAAAGTTCAACC+AGG | - | chr8.1:2775053-2775072 | MS.gene035599:CDS | 40.0% | |
TCATGGCCCGTTTCATTATT+GGG | - | chr8.1:2774723-2774742 | MS.gene035599:CDS | 40.0% | |
TCTTACAATTACGATGCACC+TGG | - | chr8.1:2771676-2771695 | MS.gene035599:intron | 40.0% | |
TGAAAAAGATCCTGCTGTTG+TGG | - | chr8.1:2774162-2774181 | MS.gene035599:intron | 40.0% | |
TGAGAAGCTATGTGAATCAG+TGG | - | chr8.1:2773505-2773524 | MS.gene035599:CDS | 40.0% | |
TGATGATTTACTGCAAGTGG+TGG | - | chr8.1:2772795-2772814 | MS.gene035599:intron | 40.0% | |
TGATTATGCAGGTTGCTTAC+TGG | - | chr8.1:2773938-2773957 | MS.gene035599:CDS | 40.0% | |
TGTAAATAGGCTCCAGAAGA+AGG | - | chr8.1:2772194-2772213 | MS.gene035599:CDS | 40.0% | |
TGTGGCAAAAGAAGCAATTC+AGG | - | chr8.1:2774180-2774199 | MS.gene035599:intron | 40.0% | |
TTCATGCTGCAAAAGAGCAA+AGG | - | chr8.1:2773758-2773777 | MS.gene035599:intron | 40.0% | |
TTCATGGCCCGTTTCATTAT+TGG | - | chr8.1:2774722-2774741 | MS.gene035599:CDS | 40.0% | |
TTCTTGTGCTCAGTATTGCT+GGG | - | chr8.1:2773272-2773291 | MS.gene035599:CDS | 40.0% | |
TTGGTTATCTGTTAGGAACC+CGG | - | chr8.1:2774338-2774357 | MS.gene035599:intron | 40.0% | |
TTTGAAGAAATCGAATCCGG+TGG | - | chr8.1:2771915-2771934 | MS.gene035599:intron | 40.0% | |
TTTGACAGTGCTCTCATCAA+TGG | + | chr8.1:2774961-2774980 | None:intergenic | 40.0% | |
! | ACATGTCACTGATGGTTTTC+AGG | - | chr8.1:2774927-2774946 | MS.gene035599:CDS | 40.0% |
! | CATTTATTGGTTGGCTAGGA+CGG | - | chr8.1:2775331-2775350 | MS.gene035599:CDS | 40.0% |
! | CTTATTTGTTGGAGAAGCAC+TGG | - | chr8.1:2775011-2775030 | MS.gene035599:CDS | 40.0% |
! | GAAATTGGCAACGCTTTGAA+AGG | - | chr8.1:2771595-2771614 | MS.gene035599:CDS | 40.0% |
! | GGTTTTCATCTATGTTCCAG+AGG | - | chr8.1:2772526-2772545 | MS.gene035599:intron | 40.0% |
! | TCTGGAGCCCAATAATGAAA+CGG | + | chr8.1:2774733-2774752 | None:intergenic | 40.0% |
! | TTGGAGGGTATACTCTATAC+TGG | + | chr8.1:2774664-2774683 | None:intergenic | 40.0% |
!! | AATGACGGTGATGGGAAAAA+TGG | - | chr8.1:2772036-2772055 | MS.gene035599:CDS | 40.0% |
!! | ATGACGGTGATGGGAAAAAT+GGG | - | chr8.1:2772037-2772056 | MS.gene035599:CDS | 40.0% |
!! | CAACCCTTCTTTTTAGCATC+AGG | + | chr8.1:2772507-2772526 | None:intergenic | 40.0% |
!! | TTTAAGGAGCGTCTTCACAA+TGG | + | chr8.1:2775705-2775724 | None:intergenic | 40.0% |
AAACAGCAGGTCACATGGAA+GGG | - | chr8.1:2771955-2771974 | MS.gene035599:intron | 45.0% | |
AAATCGAATCCGGTGGTTGT+AGG | - | chr8.1:2771922-2771941 | MS.gene035599:intron | 45.0% | |
AACAGACGCTGTTGTAACCA+AGG | - | chr8.1:2772245-2772264 | MS.gene035599:CDS | 45.0% | |
AAGGATATCTTCCACAGTGC+AGG | - | chr8.1:2773565-2773584 | MS.gene035599:intron | 45.0% | |
AGACCAGGTCAGGATTGTTA+AGG | + | chr8.1:2774993-2775012 | None:intergenic | 45.0% | |
AGAGCTGATGGTTAATGACG+TGG | + | chr8.1:2774598-2774617 | None:intergenic | 45.0% | |
AGAGTATACCCTCCAAGGTT+TGG | - | chr8.1:2774630-2774649 | MS.gene035599:intron | 45.0% | |
ATAGGAAACAGCAGGTCACA+TGG | - | chr8.1:2771950-2771969 | MS.gene035599:intron | 45.0% | |
ATAGGCTCCAGAAGAAGGTT+AGG | - | chr8.1:2772199-2772218 | MS.gene035599:CDS | 45.0% | |
ATTCAGGAAGCTTCACGGAA+TGG | - | chr8.1:2774196-2774215 | MS.gene035599:intron | 45.0% | |
CAAGAGGAGGATTAATCCTC+TGG | - | chr8.1:2771563-2771582 | MS.gene035599:CDS | 45.0% | |
CAAGTCCGACTTCTCCAAAT+TGG | + | chr8.1:2773302-2773321 | None:intergenic | 45.0% | |
CAATTTGGAGAAGTCGGACT+TGG | - | chr8.1:2773300-2773319 | MS.gene035599:intron | 45.0% | |
CCAACAAATAAGACCAGGTC+AGG | + | chr8.1:2775003-2775022 | None:intergenic | 45.0% | |
CCACAATCTGATCCTCTTCA+TGG | - | chr8.1:2774706-2774725 | MS.gene035599:intron | 45.0% | |
CCATCAATCAATCTGGGTGT+AGG | + | chr8.1:2775205-2775224 | None:intergenic | 45.0% | |
CCATGAAGAGGATCAGATTG+TGG | + | chr8.1:2774709-2774728 | None:intergenic | 45.0% | |
CCTACACCCAGATTGATTGA+TGG | - | chr8.1:2775202-2775221 | MS.gene035599:CDS | 45.0% | |
CGATACCGTCACAAGGAAAA+TGG | + | chr8.1:2773101-2773120 | None:intergenic | 45.0% | |
CTACCTTAACAATCCTGACC+TGG | - | chr8.1:2774987-2775006 | MS.gene035599:CDS | 45.0% | |
CTGAAACAGTGATAGAGCTC+TGG | + | chr8.1:2774751-2774770 | None:intergenic | 45.0% | |
CTGGAGCCCAATAATGAAAC+GGG | + | chr8.1:2774732-2774751 | None:intergenic | 45.0% | |
GAAGGCCAATTTGGAGAAGT+CGG | - | chr8.1:2773294-2773313 | MS.gene035599:CDS | 45.0% | |
GACGTTGAGTTTCTTGAGGT+CGG | + | chr8.1:2775678-2775697 | None:intergenic | 45.0% | |
GAGGATCAGATTGTGGATAC+TGG | + | chr8.1:2774702-2774721 | None:intergenic | 45.0% | |
GAGTATACCCTCCAAGGTTT+GGG | - | chr8.1:2774631-2774650 | MS.gene035599:intron | 45.0% | |
GAGTTTCTTGAGGTCGGTAT+AGG | + | chr8.1:2775672-2775691 | None:intergenic | 45.0% | |
GCAGTTGAAGATTGAAGCTG+AGG | - | chr8.1:2771879-2771898 | MS.gene035599:intron | 45.0% | |
GGTTAATGACGTGGCATTAG+AGG | + | chr8.1:2774589-2774608 | None:intergenic | 45.0% | |
GGTTTGAAGAATGACGGTGA+TGG | - | chr8.1:2772027-2772046 | MS.gene035599:CDS | 45.0% | |
GTTAGGAATAAAGGCGGGAA+TGG | - | chr8.1:2772216-2772235 | MS.gene035599:CDS | 45.0% | |
TAATGAAACGGGCCATGAAG+AGG | + | chr8.1:2774721-2774740 | None:intergenic | 45.0% | |
TAGAAACCAAACCTGCACTG+TGG | + | chr8.1:2773579-2773598 | None:intergenic | 45.0% | |
TAGGAACCCGGGATTAATAC+CGG | - | chr8.1:2774350-2774369 | MS.gene035599:intron | 45.0% | |
TAGTGACAGTGAGGATGAAG+AGG | - | chr8.1:2772443-2772462 | MS.gene035599:intron | 45.0% | |
TATCTTCCACAGTGCAGGTT+TGG | - | chr8.1:2773570-2773589 | MS.gene035599:intron | 45.0% | |
TATTGCTGGGAAGGCCAATT+TGG | - | chr8.1:2773285-2773304 | MS.gene035599:CDS | 45.0% | |
TCCTTCAGAGCTTTCAAAGC+TGG | + | chr8.1:2773328-2773347 | None:intergenic | 45.0% | |
TGGTTATCTGTTAGGAACCC+GGG | - | chr8.1:2774339-2774358 | MS.gene035599:intron | 45.0% | |
TGTTAAGCGTGAATTCTCGC+AGG | - | chr8.1:2771807-2771826 | MS.gene035599:intron | 45.0% | |
TTCATTCAGTTAGGCGGAGT+AGG | + | chr8.1:2774466-2774485 | None:intergenic | 45.0% | |
TTGAGAGAATAAGCAGCTCC+AGG | + | chr8.1:2771697-2771716 | None:intergenic | 45.0% | |
! | AGCTTTGTCCAACTCCAGTT+GGG | - | chr8.1:2775099-2775118 | MS.gene035599:CDS | 45.0% |
! | GGAACAAGGTGAGAGTATGA+TGG | - | chr8.1:2772401-2772420 | MS.gene035599:intron | 45.0% |
! | GTTGCTTTCCTATAAGAGCG+TGG | + | chr8.1:2774406-2774425 | None:intergenic | 45.0% |
! | TGTTGATGTTGATGGGGATG+CGG | - | chr8.1:2772347-2772366 | MS.gene035599:intron | 45.0% |
!! | AAAGGTGTCAGGGGCATATA+TGG | - | chr8.1:2772956-2772975 | MS.gene035599:intron | 45.0% |
!! | AAAGTCAGGAAAGGTGTCAG+GGG | - | chr8.1:2772947-2772966 | MS.gene035599:intron | 45.0% |
!! | ACCAGCTTTGAAAGCTCTGA+AGG | - | chr8.1:2773324-2773343 | MS.gene035599:intron | 45.0% |
!! | CCTGACCTGGTCTTATTTGT+TGG | - | chr8.1:2775000-2775019 | MS.gene035599:CDS | 45.0% |
!! | CTTCTAGAGTATACCCTCCA+AGG | - | chr8.1:2774625-2774644 | MS.gene035599:intron | 45.0% |
!! | GAAAGTCAGGAAAGGTGTCA+GGG | - | chr8.1:2772946-2772965 | MS.gene035599:intron | 45.0% |
!! | TAGCTTTGTCCAACTCCAGT+TGG | - | chr8.1:2775098-2775117 | MS.gene035599:CDS | 45.0% |
!! | TGAAAGTCAGGAAAGGTGTC+AGG | - | chr8.1:2772945-2772964 | MS.gene035599:intron | 45.0% |
!! | TTGAGGAGTAACGGTGTTGT+TGG | - | chr8.1:2772117-2772136 | MS.gene035599:intron | 45.0% |
!! | TTTGTTGGAGAAGCACTGGT+TGG | - | chr8.1:2775015-2775034 | MS.gene035599:CDS | 45.0% |
!!! | GGGCTTGCTTTTTAACCTGA+AGG | - | chr8.1:2773896-2773915 | MS.gene035599:CDS | 45.0% |
AACCAAGGCTGAGCCGAAAA+AGG | - | chr8.1:2772260-2772279 | MS.gene035599:CDS | 50.0% | |
AAGAGAGACGAAGACCCAAC+TGG | + | chr8.1:2775116-2775135 | None:intergenic | 50.0% | |
AGGTGGGAATAGGAAACAGC+AGG | - | chr8.1:2771942-2771961 | MS.gene035599:intron | 50.0% | |
ATGGGGATGCGGATAAGGAT+AGG | - | chr8.1:2772358-2772377 | MS.gene035599:intron | 50.0% | |
CAATCTGGGTGTAGGAGATG+TGG | + | chr8.1:2775197-2775216 | None:intergenic | 50.0% | |
CCAGTCATGTTTGTGGGATG+CGG | - | chr8.1:2775641-2775660 | MS.gene035599:CDS | 50.0% | |
CCTTGTGACGGTATCGTCTT+GGG | - | chr8.1:2773105-2773124 | MS.gene035599:CDS | 50.0% | |
CTATTCCCACCTACAACCAC+CGG | + | chr8.1:2771934-2771953 | None:intergenic | 50.0% | |
GAAACAGCAGGTCACATGGA+AGG | - | chr8.1:2771954-2771973 | MS.gene035599:intron | 50.0% | |
GGAAGCTTCACGGAATGGTT+CGG | - | chr8.1:2774201-2774220 | MS.gene035599:intron | 50.0% | |
GGAAGGGAGATGGATCTGAT+GGG | - | chr8.1:2771971-2771990 | MS.gene035599:intron | 50.0% | |
GGAGCTCCAGTCATGTTTGT+GGG | - | chr8.1:2775635-2775654 | MS.gene035599:CDS | 50.0% | |
GGATGCGGATAAGGATAGGA+AGG | - | chr8.1:2772362-2772381 | MS.gene035599:intron | 50.0% | |
GGCGAAATACATGGGTGAGA+TGG | + | chr8.1:2775447-2775466 | None:intergenic | 50.0% | |
GGCGGTGGTTTGAAGAATGA+CGG | - | chr8.1:2772021-2772040 | MS.gene035599:CDS | 50.0% | |
GTCGGCACCAAATGTCGATA+GGG | + | chr8.1:2773609-2773628 | None:intergenic | 50.0% | |
TCAGTGGCAGCAAGTCTTGA+AGG | - | chr8.1:2773521-2773540 | MS.gene035599:CDS | 50.0% | |
TCCTTGTGACGGTATCGTCT+TGG | - | chr8.1:2773104-2773123 | MS.gene035599:CDS | 50.0% | |
TGGAAGGGAGATGGATCTGA+TGG | - | chr8.1:2771970-2771989 | MS.gene035599:intron | 50.0% | |
TGGAGCTCCAGTCATGTTTG+TGG | - | chr8.1:2775634-2775653 | MS.gene035599:CDS | 50.0% | |
TGGGTGTAGGAGATGTGGAA+AGG | + | chr8.1:2775192-2775211 | None:intergenic | 50.0% | |
TGTGCTCAGTATTGCTGGGA+AGG | - | chr8.1:2773276-2773295 | MS.gene035599:CDS | 50.0% | |
! | AAGAAGAATGCCAGTGCTGG+TGG | - | chr8.1:2771994-2772013 | MS.gene035599:intron | 50.0% |
! | ATCTCGATACACGGTTCTGG+TGG | + | chr8.1:2771842-2771861 | None:intergenic | 50.0% |
! | ATTCCTCTCTGAAGGAGCCT+TGG | + | chr8.1:2774441-2774460 | None:intergenic | 50.0% |
! | GCTTCTTTTGCCACAACAGC+AGG | + | chr8.1:2774175-2774194 | None:intergenic | 50.0% |
! | TCTCGATACACGGTTCTGGT+GGG | + | chr8.1:2771841-2771860 | None:intergenic | 50.0% |
! | TGTCTTCTAGAGGAGCGATC+TGG | - | chr8.1:2771646-2771665 | MS.gene035599:intron | 50.0% |
! | TGTTGATGGGGATGCGGATA+AGG | - | chr8.1:2772353-2772372 | MS.gene035599:intron | 50.0% |
!! | TCTGTGTCACTTGTAGGCTG+AGG | - | chr8.1:2773475-2773494 | MS.gene035599:CDS | 50.0% |
!!! | TACCTTTTTCGGCTCAGCCT+TGG | + | chr8.1:2772265-2772284 | None:intergenic | 50.0% |
ACCCTCCAAGGTTTGCGATG+TGG | - | chr8.1:2774637-2774656 | MS.gene035599:intron | 55.0% | |
AGGGAAGGGGGCGAAATACA+TGG | + | chr8.1:2775456-2775475 | None:intergenic | 55.0% | |
CAGGAGCTGTTGAGCAGTTG+CGG | - | chr8.1:2774013-2774032 | MS.gene035599:intron | 55.0% | |
CAGGTCACATGGAAGGGAGA+TGG | - | chr8.1:2771961-2771980 | MS.gene035599:intron | 55.0% | |
CCCAAGACGATACCGTCACA+AGG | + | chr8.1:2773108-2773127 | None:intergenic | 55.0% | |
CCCACATCCCAAACCTTGGA+GGG | + | chr8.1:2774679-2774698 | None:intergenic | 55.0% | |
CCCACATCGCAAACCTTGGA+GGG | + | chr8.1:2774641-2774660 | None:intergenic | 55.0% | |
CCCTCCAAGGTTTGCGATGT+GGG | - | chr8.1:2774638-2774657 | MS.gene035599:intron | 55.0% | |
CCGCATCCCACAAACATGAC+TGG | + | chr8.1:2775644-2775663 | None:intergenic | 55.0% | |
CGAATCCGGTGGTTGTAGGT+GGG | - | chr8.1:2771926-2771945 | MS.gene035599:intron | 55.0% | |
CGGTGGTTGTAGGTGGGAAT+AGG | - | chr8.1:2771932-2771951 | MS.gene035599:intron | 55.0% | |
GACGAAGACCCAACTGGAGT+TGG | + | chr8.1:2775110-2775129 | None:intergenic | 55.0% | |
GGGAAGAAGAATGCCAGTGC+TGG | - | chr8.1:2771991-2772010 | MS.gene035599:intron | 55.0% | |
GGGAAGGGGGCGAAATACAT+GGG | + | chr8.1:2775455-2775474 | None:intergenic | 55.0% | |
GGTCGGCACCAAATGTCGAT+AGG | + | chr8.1:2773610-2773629 | None:intergenic | 55.0% | |
GGTGGGAGCTGCACTTTCAA+TGG | - | chr8.1:2775601-2775620 | MS.gene035599:CDS | 55.0% | |
GTTGTGCTAGTCGACACAGC+TGG | - | chr8.1:2774226-2774245 | MS.gene035599:intron | 55.0% | |
TCGAATCCGGTGGTTGTAGG+TGG | - | chr8.1:2771925-2771944 | MS.gene035599:intron | 55.0% | |
TCTAGAGGAGCGATCTGGTG+CGG | - | chr8.1:2771651-2771670 | MS.gene035599:intron | 55.0% | |
TCTGAAGGAGCCTTGGCTCA+GGG | + | chr8.1:2774434-2774453 | None:intergenic | 55.0% | |
TGAAGCTGAGGCTCGTTCTG+AGG | - | chr8.1:2771891-2771910 | MS.gene035599:intron | 55.0% | |
! | ACCCTCCAAGGTTTGGGATG+TGG | - | chr8.1:2774675-2774694 | MS.gene035599:intron | 55.0% |
! | CCCTCCAAGGTTTGGGATGT+GGG | - | chr8.1:2774676-2774695 | MS.gene035599:intron | 55.0% |
!! | AAGAATGCCAGTGCTGGTGG+TGG | - | chr8.1:2771997-2772016 | MS.gene035599:intron | 55.0% |
AGTTGCGGACTCATGCACGC+AGG | - | chr8.1:2774028-2774047 | MS.gene035599:intron | 60.0% | |
CGACACAGCTGGTCGTATGC+AGG | - | chr8.1:2774237-2774256 | MS.gene035599:intron | 60.0% | |
CTGGCCCACATCCCAAACCT+TGG | + | chr8.1:2774683-2774702 | None:intergenic | 60.0% | |
CTGGCCCACATCGCAAACCT+TGG | + | chr8.1:2774645-2774664 | None:intergenic | 60.0% | |
GACTCATGCACGCAGGCTTC+AGG | - | chr8.1:2774035-2774054 | MS.gene035599:intron | 60.0% | |
GAGCCAAGGCTCCTTCAGAG+AGG | - | chr8.1:2774435-2774454 | MS.gene035599:intron | 60.0% | |
GCAACAGACACCCTGAGCCA+AGG | - | chr8.1:2774421-2774440 | MS.gene035599:intron | 60.0% | |
GCCCACATCCCAAACCTTGG+AGG | + | chr8.1:2774680-2774699 | None:intergenic | 60.0% | |
GCCCACATCGCAAACCTTGG+AGG | + | chr8.1:2774642-2774661 | None:intergenic | 60.0% | |
! | CTCTGAAGGAGCCTTGGCTC+AGG | + | chr8.1:2774435-2774454 | None:intergenic | 60.0% |
!! | AATGCCAGTGCTGGTGGTGG+TGG | - | chr8.1:2772000-2772019 | MS.gene035599:intron | 60.0% |
GGCGGCAATGGAAGACGCAC+TGG | - | chr8.1:2773690-2773709 | MS.gene035599:CDS | 65.0% | |
ACCGCCACCACCACCAGCAC+TGG | + | chr8.1:2772007-2772026 | None:intergenic | 70.0% | |
!! | AGTGCTGGTGGTGGTGGCGG+TGG | - | chr8.1:2772006-2772025 | MS.gene035599:CDS | 70.0% |
!! | GCCAGTGCTGGTGGTGGTGG+CGG | - | chr8.1:2772003-2772022 | MS.gene035599:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 2771538 | 2775727 | 2771538 | ID=MS.gene035599 |
chr8.1 | mRNA | 2771538 | 2775727 | 2771538 | ID=MS.gene035599.t1;Parent=MS.gene035599 |
chr8.1 | exon | 2774718 | 2775727 | 2774718 | ID=MS.gene035599.t1.exon1;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2774718 | 2775727 | 2774718 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2773896 | 2773980 | 2773896 | ID=MS.gene035599.t1.exon2;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2773896 | 2773980 | 2773896 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2773679 | 2773774 | 2773679 | ID=MS.gene035599.t1.exon3;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2773679 | 2773774 | 2773679 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2773422 | 2773574 | 2773422 | ID=MS.gene035599.t1.exon4;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2773422 | 2773574 | 2773422 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2773209 | 2773316 | 2773209 | ID=MS.gene035599.t1.exon5;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2773209 | 2773316 | 2773209 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2773007 | 2773126 | 2773007 | ID=MS.gene035599.t1.exon6;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2773007 | 2773126 | 2773007 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2772191 | 2772316 | 2772191 | ID=MS.gene035599.t1.exon7;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2772191 | 2772316 | 2772191 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2772004 | 2772087 | 2772004 | ID=MS.gene035599.t1.exon8;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2772004 | 2772087 | 2772004 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
chr8.1 | exon | 2771538 | 2771663 | 2771538 | ID=MS.gene035599.t1.exon9;Parent=MS.gene035599.t1 |
chr8.1 | CDS | 2771538 | 2771663 | 2771538 | ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1 |
Gene Sequence |
Protein sequence |