AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035599


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035599.t1 MTR_4g130770 97.953 635 9 2 1 635 1 631 0.0 1264
MS.gene035599.t1 MTR_4g010050 30.962 239 147 3 396 634 75 295 1.08e-30 126
MS.gene035599.t1 MTR_7g104890 34.536 194 116 2 429 622 33 215 3.26e-30 124
MS.gene035599.t1 MTR_7g104890 28.082 292 192 4 331 622 75 348 7.55e-30 124
MS.gene035599.t1 MTR_2g104050 30.544 239 148 3 396 634 75 295 1.47e-29 122
MS.gene035599.t1 MTR_8g032340 27.517 298 185 8 347 634 94 370 4.27e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035599.t1 AT4G30600 75.422 651 127 14 1 635 1 634 0.0 887
MS.gene035599.t1 AT4G30600 75.422 651 127 14 1 635 1 634 0.0 887
MS.gene035599.t1 AT1G48900 26.797 306 206 3 329 634 8 295 4.04e-32 129
MS.gene035599.t1 AT1G48900 26.797 306 206 3 329 634 8 295 5.66e-32 130
MS.gene035599.t1 AT5G03940 28.571 294 192 4 329 622 83 358 6.80e-32 130
MS.gene035599.t1 AT1G15310 28.727 275 178 3 360 634 39 295 1.29e-31 129
MS.gene035599.t1 AT2G45770 29.667 300 180 8 343 634 89 365 4.21e-27 114
MS.gene035599.t1 AT5G49500 24.351 308 213 4 329 634 8 297 2.22e-23 104
MS.gene035599.t1 AT5G49500 29.480 173 111 2 462 634 14 175 5.81e-20 92.8

Find 144 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTTTCATCCTTTCATTTA+AGG 0.135782 8.1:+2771525 None:intergenic
GGATAGGAAGGTTGATTATT+TGG 0.186314 8.1:-2774869 MS.gene035599:CDS
CTTTCAATGGTTTACATATC+TGG 0.196127 8.1:-2771629 MS.gene035599:CDS
TGATTATGCAGGTTGCTTAC+TGG 0.239203 8.1:-2773305 MS.gene035599:intron
GTTGGTAATGTTAGTGTAAA+TGG 0.240516 8.1:-2775108 MS.gene035599:CDS
CATAACCCTTCTCAAATATA+GGG 0.264100 8.1:+2773102 None:intergenic
TCATAACCCTTCTCAAATAT+AGG 0.269160 8.1:+2773101 None:intergenic
CTCTGGTCATGCAATGAAAT+TGG 0.273870 8.1:-2775663 MS.gene035599:CDS
GTTGTATTTGTTGGAGTTAA+TGG 0.282982 8.1:-2773450 MS.gene035599:CDS
CTTTATTCCTAACCTTCTTC+TGG 0.284805 8.1:+2775037 None:intergenic
TATTGCTGGGAAGGCCAATT+TGG 0.285068 8.1:-2773958 MS.gene035599:CDS
GACTCATGCACGCAGGCTTC+AGG 0.306590 8.1:-2773208 MS.gene035599:intron
CCATATGTTGTTGTATTTGT+TGG 0.324829 8.1:-2773459 MS.gene035599:CDS
CCTGACCTGGTCTTATTTGT+TGG 0.326012 8.1:-2772243 MS.gene035599:CDS
CAAGTCCGACTTCTCCAAAT+TGG 0.330709 8.1:+2773944 None:intergenic
ATTCTTGTGCTCAGTATTGC+TGG 0.340703 8.1:-2773972 MS.gene035599:intron
AACCAAGGCTGAGCCGAAAA+AGG 0.357649 8.1:-2774983 MS.gene035599:CDS
CAAGATCCCATCAATCAATC+TGG 0.383740 8.1:+2772034 None:intergenic
GAGTTTCTTGAGGTCGGTAT+AGG 0.387081 8.1:+2771574 None:intergenic
CAGAAGAAGGTTAGGAATAA+AGG 0.388438 8.1:-2775036 MS.gene035599:CDS
ACGGATCATGTTGATGTTGA+TGG 0.394256 8.1:-2774904 MS.gene035599:CDS
GGTGGGAGCTGCACTTTCAA+TGG 0.401497 8.1:-2771642 MS.gene035599:CDS
CGGTGGTTGTAGGTGGGAAT+AGG 0.404012 8.1:-2775311 MS.gene035599:CDS
TTTGACAGTGCTCTCATCAA+TGG 0.412182 8.1:+2772285 None:intergenic
ATAAATACATACCACATTCT+TGG 0.414415 8.1:+2773884 None:intergenic
TCCTTCAGAGCTTTCAAAGC+TGG 0.420133 8.1:+2773918 None:intergenic
TTGAGGAGTAACGGTGTTGT+TGG 0.422921 8.1:-2775126 MS.gene035599:CDS
CCAACAAATACAACAACATA+TGG 0.423685 8.1:+2773459 None:intergenic
GCCAGTGCTGGTGGTGGTGG+CGG 0.424543 8.1:-2775240 MS.gene035599:CDS
AAATCTAATTTAGTTTCAAC+GGG 0.426379 8.1:+2774928 None:intergenic
TGTGGCAAAAGAAGCAATTC+AGG 0.429961 8.1:-2773063 MS.gene035599:CDS
TGTTGATGGGGATGCGGATA+AGG 0.434408 8.1:-2774890 MS.gene035599:CDS
TAGTGACAGTGAGGATGAAG+AGG 0.435461 8.1:-2774800 MS.gene035599:CDS
CAATTTGGAGAAGTCGGACT+TGG 0.441725 8.1:-2773943 MS.gene035599:CDS
AAATCGAATCCGGTGGTTGT+AGG 0.450153 8.1:-2775321 MS.gene035599:CDS
GTTCGACACTATTGATGATA+AGG 0.450965 8.1:-2772003 MS.gene035599:intron
AATGCCAGTGCTGGTGGTGG+TGG 0.452714 8.1:-2775243 MS.gene035599:CDS
ACCGCCACCACCACCAGCAC+TGG 0.454509 8.1:+2775239 None:intergenic
CGTTCTGTTATTGTGAATAA+CGG 0.459586 8.1:-2775162 MS.gene035599:CDS
GGAAGCTTCACGGAATGGTT+CGG 0.463640 8.1:-2773042 MS.gene035599:CDS
ATAGGCTCCAGAAGAAGGTT+AGG 0.465195 8.1:-2775044 MS.gene035599:CDS
AGTGCTGGTGGTGGTGGCGG+TGG 0.465276 8.1:-2775237 MS.gene035599:CDS
AAAATCTAATTTAGTTTCAA+CGG 0.465883 8.1:+2774927 None:intergenic
GGCGTTCTATTGACATATTG+AGG 0.470946 8.1:-2773512 MS.gene035599:CDS
CAAGAGGAGGATTAATCCTC+TGG 0.471238 8.1:-2775680 MS.gene035599:CDS
CCTACACCCAGATTGATTGA+TGG 0.472241 8.1:-2772041 MS.gene035599:CDS
CGGATCATGTTGATGTTGAT+GGG 0.473173 8.1:-2774903 MS.gene035599:CDS
GAAGGTTGATTATTTGGCTA+AGG 0.473509 8.1:-2774863 MS.gene035599:CDS
TGGAGCTCCAGTCATGTTTG+TGG 0.474210 8.1:-2771609 MS.gene035599:CDS
CCAACAAATAAGACCAGGTC+AGG 0.474859 8.1:+2772243 None:intergenic
TTTGTTGGAGTTAATGGAGT+TGG 0.477015 8.1:-2773444 MS.gene035599:CDS
TGGAAGGGAGATGGATCTGA+TGG 0.483093 8.1:-2775273 MS.gene035599:CDS
AAGGATATCTTCCACAGTGC+AGG 0.486091 8.1:-2773678 MS.gene035599:intron
AAAATCTCGATACACGGTTC+TGG 0.486570 8.1:+2775401 None:intergenic
GAGCTGCTTATTCTCTCAAA+TGG 0.492519 8.1:-2775545 MS.gene035599:CDS
CTTATTTGTTGGAGAAGCAC+TGG 0.493495 8.1:-2772232 MS.gene035599:CDS
GCTTGTGATACATTTCGATC+AGG 0.496091 8.1:-2773249 MS.gene035599:CDS
GTTAGGAATAAAGGCGGGAA+TGG 0.496788 8.1:-2775027 MS.gene035599:CDS
TGTAAATAGGCTCCAGAAGA+AGG 0.499134 8.1:-2775049 MS.gene035599:CDS
ATCTCGATACACGGTTCTGG+TGG 0.501240 8.1:+2775404 None:intergenic
TGTGCTCAGTATTGCTGGGA+AGG 0.505470 8.1:-2773967 MS.gene035599:intron
GCGTTCTATTGACATATTGA+GGG 0.507989 8.1:-2773511 MS.gene035599:CDS
AGACCAGGTCAGGATTGTTA+AGG 0.512658 8.1:+2772253 None:intergenic
TTCTTGTGCTCAGTATTGCT+GGG 0.513106 8.1:-2773971 MS.gene035599:intron
TCAGTGGCAGCAAGTCTTGA+AGG 0.514318 8.1:-2773722 MS.gene035599:CDS
CTATTCCCACCTACAACCAC+CGG 0.515311 8.1:+2775312 None:intergenic
CCAGTCATGTTTGTGGGATG+CGG 0.515363 8.1:-2771602 MS.gene035599:CDS
ATGGGGATGCGGATAAGGAT+AGG 0.516473 8.1:-2774885 MS.gene035599:CDS
TCAGATCCCTATATTTGAGA+AGG 0.520704 8.1:-2773108 MS.gene035599:intron
CTACACCCAGATTGATTGAT+GGG 0.521118 8.1:-2772040 MS.gene035599:CDS
ACGGTAACGGTTATAATTTG+AGG 0.521482 8.1:-2775143 MS.gene035599:CDS
CAGGAGCTGTTGAGCAGTTG+CGG 0.524608 8.1:-2773230 MS.gene035599:CDS
GAAATTGGCAACGCTTTGAA+AGG 0.527215 8.1:-2775648 MS.gene035599:CDS
GGAGCTCCAGTCATGTTTGT+GGG 0.528002 8.1:-2771608 MS.gene035599:CDS
CAGATCCCTATATTTGAGAA+GGG 0.528857 8.1:-2773107 MS.gene035599:CDS
GACGTTGAGTTTCTTGAGGT+CGG 0.531116 8.1:+2771568 None:intergenic
AAGCAATTCAGGAAGCTTCA+CGG 0.533244 8.1:-2773052 MS.gene035599:CDS
GGCGGCAATGGAAGACGCAC+TGG 0.534128 8.1:-2773553 MS.gene035599:CDS
CGACACAGCTGGTCGTATGC+AGG 0.535402 8.1:-2773006 MS.gene035599:intron
ATTCAGGAAGCTTCACGGAA+TGG 0.540152 8.1:-2773047 MS.gene035599:CDS
GGAACAAGGTGAGAGTATGA+TGG 0.543614 8.1:-2774842 MS.gene035599:CDS
TCGAATCCGGTGGTTGTAGG+TGG 0.545919 8.1:-2775318 MS.gene035599:CDS
GATTCGATCTTGTCTTCTAG+AGG 0.546611 8.1:-2775607 MS.gene035599:CDS
CAGGTCACATGGAAGGGAGA+TGG 0.546721 8.1:-2775282 MS.gene035599:CDS
TGTCTTCTAGAGGAGCGATC+TGG 0.547527 8.1:-2775597 MS.gene035599:CDS
GGATTTGAAGAAATCGAATC+CGG 0.550640 8.1:-2775331 MS.gene035599:CDS
CAATCTGGGTGTAGGAGATG+TGG 0.553386 8.1:+2772049 None:intergenic
AAAATCTACTAATCTTGCTA+AGG 0.553829 8.1:-2773421 MS.gene035599:intron
CCGCATCCCACAAACATGAC+TGG 0.559796 8.1:+2771602 None:intergenic
ACCAGCTTTGAAAGCTCTGA+AGG 0.559926 8.1:-2773919 MS.gene035599:CDS
TTGAGAGAATAAGCAGCTCC+AGG 0.560375 8.1:+2775549 None:intergenic
AAACAGCAGGTCACATGGAA+GGG 0.561061 8.1:-2775288 MS.gene035599:CDS
GATTATTTGGCTAAGGAACA+AGG 0.566749 8.1:-2774856 MS.gene035599:CDS
GAAACAGCAGGTCACATGGA+AGG 0.569230 8.1:-2775289 MS.gene035599:CDS
GTTATTGTGAATAACGGTAA+CGG 0.570694 8.1:-2775156 MS.gene035599:CDS
CAATTTCATTGCATGACCAG+AGG 0.575171 8.1:+2775664 None:intergenic
GCAGTTGAAGATTGAAGCTG+AGG 0.579144 8.1:-2775364 MS.gene035599:CDS
AAGATCCCATCAATCAATCT+GGG 0.579799 8.1:+2772035 None:intergenic
CCATCAATCAATCTGGGTGT+AGG 0.581937 8.1:+2772041 None:intergenic
GGATGCGGATAAGGATAGGA+AGG 0.582099 8.1:-2774881 MS.gene035599:CDS
TGAAGCTGAGGCTCGTTCTG+AGG 0.584141 8.1:-2775352 MS.gene035599:CDS
ACTTGACGTTGAGTTTCTTG+AGG 0.584980 8.1:+2771564 None:intergenic
GGGAAGAAGAATGCCAGTGC+TGG 0.586484 8.1:-2775252 MS.gene035599:CDS
CTGATCAAAATCTCGATACA+CGG 0.587720 8.1:+2775395 None:intergenic
CTACCTTAACAATCCTGACC+TGG 0.587728 8.1:-2772256 MS.gene035599:CDS
TTTGTTGGAGAAGCACTGGT+TGG 0.588986 8.1:-2772228 MS.gene035599:CDS
GGTTATAATTTGAGGAGTAA+CGG 0.590987 8.1:-2775135 MS.gene035599:CDS
GTTTGAAGAATGACGGTGAT+GGG 0.596520 8.1:-2775215 MS.gene035599:CDS
TGTTAAGCGTGAATTCTCGC+AGG 0.597191 8.1:-2775436 MS.gene035599:CDS
TTTAAGGAGCGTCTTCACAA+TGG 0.598414 8.1:+2771541 None:intergenic
CGAATCCGGTGGTTGTAGGT+GGG 0.598863 8.1:-2775317 MS.gene035599:CDS
ATAGGAAACAGCAGGTCACA+TGG 0.602479 8.1:-2775293 MS.gene035599:CDS
AGGTGGGAATAGGAAACAGC+AGG 0.603318 8.1:-2775301 MS.gene035599:CDS
AATTCTGCATCTGCTCTATG+TGG 0.603688 8.1:-2775475 MS.gene035599:CDS
TTCATGCTGCAAAAGAGCAA+AGG 0.608654 8.1:-2773485 MS.gene035599:CDS
ACACAATGTTAATGTCATGA+TGG 0.611925 8.1:-2773274 MS.gene035599:CDS
GAGAATGATAGTGTAAACAA+TGG 0.612652 8.1:-2775081 MS.gene035599:CDS
GATCGAATCAATGTATCGAT+CGG 0.617091 8.1:+2775621 None:intergenic
CTTCTCCAACAAATAAGACC+AGG 0.622372 8.1:+2772238 None:intergenic
TGAGAAGCTATGTGAATCAG+TGG 0.623505 8.1:-2773738 MS.gene035599:CDS
GTTGTGCTAGTCGACACAGC+TGG 0.625758 8.1:-2773017 MS.gene035599:CDS
TCTTACAATTACGATGCACC+TGG 0.626789 8.1:-2775567 MS.gene035599:CDS
TCTCGATACACGGTTCTGGT+GGG 0.628791 8.1:+2775405 None:intergenic
AACAGACGCTGTTGTAACCA+AGG 0.629920 8.1:-2774998 MS.gene035599:CDS
AAGAATGCCAGTGCTGGTGG+TGG 0.631319 8.1:-2775246 MS.gene035599:CDS
TGTTGATGTTGATGGGGATG+CGG 0.631820 8.1:-2774896 MS.gene035599:CDS
GGAAGGGAGATGGATCTGAT+GGG 0.633548 8.1:-2775272 MS.gene035599:CDS
GAAGGCCAATTTGGAGAAGT+CGG 0.633774 8.1:-2773949 MS.gene035599:CDS
GGTTTGAAGAATGACGGTGA+TGG 0.634038 8.1:-2775216 MS.gene035599:CDS
AGAAGGTTAGGAATAAAGGC+GGG 0.636662 8.1:-2775032 MS.gene035599:CDS
CGTTATTCACAATAACAGAA+CGG 0.639458 8.1:+2775163 None:intergenic
GGCGGTGGTTTGAAGAATGA+CGG 0.640321 8.1:-2775222 MS.gene035599:CDS
TCAGCTTTCAAAGTTCAACC+AGG 0.642481 8.1:-2772190 MS.gene035599:intron
AAGAAGAATGCCAGTGCTGG+TGG 0.643037 8.1:-2775249 MS.gene035599:CDS
TGGGTGTAGGAGATGTGGAA+AGG 0.654736 8.1:+2772054 None:intergenic
TAGACTCATGACCAAGAATG+TGG 0.655583 8.1:-2773895 MS.gene035599:intron
AGTTGCGGACTCATGCACGC+AGG 0.656119 8.1:-2773215 MS.gene035599:CDS
GGATCATGTTGATGTTGATG+GGG 0.663445 8.1:-2774902 MS.gene035599:CDS
ATGATGATGATGATAATGCT+GGG 0.668563 8.1:-2774774 MS.gene035599:CDS
TTTGAAGAAATCGAATCCGG+TGG 0.670497 8.1:-2775328 MS.gene035599:CDS
TCTAGAGGAGCGATCTGGTG+CGG 0.676914 8.1:-2775592 MS.gene035599:CDS
AAGAAGGTTAGGAATAAAGG+CGG 0.679488 8.1:-2775033 MS.gene035599:CDS
AATATGTCAATAGAACGCCT+AGG 0.693947 8.1:+2773516 None:intergenic
TAGAAACCAAACCTGCACTG+TGG 0.728001 8.1:+2773667 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATTGTATATAAATAAA+AGG + chr8.1:2773631-2773650 None:intergenic 10.0%
!!! AAAAATTTATTGATTTTATG+GGG - chr8.1:2774285-2774304 MS.gene035599:intron 10.0%
!!! CAAAAATTTATTGATTTTAT+GGG - chr8.1:2774284-2774303 MS.gene035599:intron 10.0%
!! ATAAATTAAATTGTTACTCT+TGG - chr8.1:2773003-2773022 MS.gene035599:intron 15.0%
!! ATTGTATATAAATAAAAGGT+CGG + chr8.1:2773627-2773646 None:intergenic 15.0%
!!! AAAATCTAATTTAGTTTCAA+CGG + chr8.1:2772319-2772338 None:intergenic 15.0%
!!! AAAATTTATTGATTTTATGG+GGG - chr8.1:2774286-2774305 MS.gene035599:intron 15.0%
!!! GCAAAAATTTATTGATTTTA+TGG - chr8.1:2774283-2774302 MS.gene035599:intron 15.0%
!!! TATTTAACTTGTAATGATAT+TGG - chr8.1:2772914-2772933 MS.gene035599:intron 15.0%
!!! TGAAACTAAATTAGATTTTA+CGG - chr8.1:2772320-2772339 MS.gene035599:intron 15.0%
!! AAAAGGTAGTTAAGAAAAAT+AGG - chr8.1:2772277-2772296 MS.gene035599:CDS 20.0%
!! AAAGGTAGTTAAGAAAAATA+GGG - chr8.1:2772278-2772297 MS.gene035599:CDS 20.0%
!! CTATGAATAAGATTTCAATA+AGG + chr8.1:2772848-2772867 None:intergenic 20.0%
!! TAATCATTACCCATATTAAA+TGG + chr8.1:2775364-2775383 None:intergenic 20.0%
!! TATTCTTGATGAACATTTAT+TGG - chr8.1:2775318-2775337 MS.gene035599:CDS 20.0%
!! TCTATTCCAATAAACATAAA+AGG + chr8.1:2774815-2774834 None:intergenic 20.0%
!!! AAACAATAAAAGTATTGTCA+AGG + chr8.1:2772766-2772785 None:intergenic 20.0%
!!! AAATCTAATTTAGTTTCAAC+GGG + chr8.1:2772318-2772337 None:intergenic 20.0%
!!! AATGAACCTTTTATGTTTAT+TGG - chr8.1:2774806-2774825 MS.gene035599:CDS 20.0%
!!! TAATTATGTTTGATTTTGTC+AGG - chr8.1:2775580-2775599 MS.gene035599:CDS 20.0%
!!! TTTTATGTTTATTGGAATAG+AGG - chr8.1:2774814-2774833 MS.gene035599:CDS 20.0%
!!! TTTTTCTTAACTACCTTTTT+CGG + chr8.1:2772276-2772295 None:intergenic 20.0%
! AAAATCTACTAATCTTGCTA+AGG - chr8.1:2773822-2773841 MS.gene035599:intron 25.0%
! AACTAGCAAAGACAAAATAA+AGG + chr8.1:2775476-2775495 None:intergenic 25.0%
! ACTAGCAAAGACAAAATAAA+GGG + chr8.1:2775475-2775494 None:intergenic 25.0%
! AGACAAAAAAATCCAATTCA+AGG + chr8.1:2772718-2772737 None:intergenic 25.0%
! AGTGTTATATTTCCTTGAAT+TGG - chr8.1:2772703-2772722 MS.gene035599:intron 25.0%
! AGTTAAGAAAAATAGGGTTT+GGG - chr8.1:2772284-2772303 MS.gene035599:CDS 25.0%
! AGTTTCTGCAACAAAATAAA+TGG + chr8.1:2775163-2775182 None:intergenic 25.0%
! ATAAATACATACCACATTCT+TGG + chr8.1:2773362-2773381 None:intergenic 25.0%
! CAACTTTGCAAGTAAATTTA+TGG - chr8.1:2775282-2775301 MS.gene035599:CDS 25.0%
! GAATAAGTGCATAAAAGATT+GGG + chr8.1:2774539-2774558 None:intergenic 25.0%
! GTTTCTGCAACAAAATAAAT+GGG + chr8.1:2775162-2775181 None:intergenic 25.0%
! TAAATTTATGGCTAAGCATT+TGG - chr8.1:2775294-2775313 MS.gene035599:CDS 25.0%
! TAAGACATATGTGCATTATT+AGG - chr8.1:2772881-2772900 MS.gene035599:intron 25.0%
! TAGAATGAATGGATATTAAG+TGG - chr8.1:2774501-2774520 MS.gene035599:intron 25.0%
! TAGTTAAGAAAAATAGGGTT+TGG - chr8.1:2772283-2772302 MS.gene035599:CDS 25.0%
! TATGTAAAAATTCCGTATGT+CGG - chr8.1:2773875-2773894 MS.gene035599:intron 25.0%
! TTCGTTAGTCAATATAAAAC+CGG + chr8.1:2774372-2774391 None:intergenic 25.0%
!! AATACTATTGGTTATCTGTT+AGG - chr8.1:2774331-2774350 MS.gene035599:intron 25.0%
!!! ATTTATTTTGTTGCAGAAAC+TGG - chr8.1:2775162-2775181 MS.gene035599:CDS 25.0%
!!! CTGCATTATTTTTCAAAACA+CGG + chr8.1:2773671-2773690 None:intergenic 25.0%
!!! GTTTTATATTGACTAACGAA+AGG - chr8.1:2774372-2774391 MS.gene035599:intron 25.0%
!!! TTACTAACTTCTAGAATGAA+TGG - chr8.1:2774490-2774509 MS.gene035599:intron 25.0%
AAAGACAAAATAAAGGGAAG+GGG + chr8.1:2775469-2775488 None:intergenic 30.0%
ACACAATGTTAATGTCATGA+TGG - chr8.1:2773969-2773988 MS.gene035599:intron 30.0%
ACCAAATGACTCAATACTAT+TGG - chr8.1:2774319-2774338 MS.gene035599:intron 30.0%
AGTAACTGTTTCATTCAGTT+AGG + chr8.1:2774475-2774494 None:intergenic 30.0%
ATGATAAGGTATGCAAATAC+TGG - chr8.1:2775254-2775273 MS.gene035599:CDS 30.0%
ATGTAAAAATTCCGTATGTC+GGG - chr8.1:2773876-2773895 MS.gene035599:intron 30.0%
ATTAGAGGTTCCATTTCTTA+AGG + chr8.1:2774574-2774593 None:intergenic 30.0%
CAAAGACAAAATAAAGGGAA+GGG + chr8.1:2775470-2775489 None:intergenic 30.0%
CATAACCCTTCTCAAATATA+GGG + chr8.1:2774144-2774163 None:intergenic 30.0%
CCAACAAATACAACAACATA+TGG + chr8.1:2773787-2773806 None:intergenic 30.0%
CCATATGTTGTTGTATTTGT+TGG - chr8.1:2773784-2773803 MS.gene035599:intron 30.0%
CGTTATTCACAATAACAGAA+CGG + chr8.1:2772083-2772102 None:intergenic 30.0%
CGTTCTGTTATTGTGAATAA+CGG - chr8.1:2772081-2772100 MS.gene035599:intron 30.0%
CTTGATGAACATTTATTGGT+TGG - chr8.1:2775322-2775341 MS.gene035599:CDS 30.0%
CTTTCAATGGTTTACATATC+TGG - chr8.1:2775614-2775633 MS.gene035599:CDS 30.0%
GGAAAATTGTCATAGTTGAA+TGG - chr8.1:2774835-2774854 MS.gene035599:CDS 30.0%
GGAATAAGTGCATAAAAGAT+TGG + chr8.1:2774540-2774559 None:intergenic 30.0%
GGTTATAATTTGAGGAGTAA+CGG - chr8.1:2772108-2772127 MS.gene035599:intron 30.0%
GTTATTGTGAATAACGGTAA+CGG - chr8.1:2772087-2772106 MS.gene035599:intron 30.0%
TAATCAAAGCAACATGTAAG+AGG + chr8.1:2773043-2773062 None:intergenic 30.0%
TAATGATGATTTACTGCAAG+TGG - chr8.1:2772792-2772811 MS.gene035599:intron 30.0%
TATAAAACCGGTATTAATCC+CGG + chr8.1:2774360-2774379 None:intergenic 30.0%
TCAAATATAGGGATCTGAAA+GGG + chr8.1:2774133-2774152 None:intergenic 30.0%
TCATAACCCTTCTCAAATAT+AGG + chr8.1:2774145-2774164 None:intergenic 30.0%
TGAATATATTGAACCTAACC+TGG + chr8.1:2775074-2775093 None:intergenic 30.0%
TTAGAGGTTCCATTTCTTAA+GGG + chr8.1:2774573-2774592 None:intergenic 30.0%
! AAAAACTGGCTTCATTTACA+AGG - chr8.1:2773546-2773565 MS.gene035599:CDS 30.0%
! ACCAATAGTATTGAGTCATT+TGG + chr8.1:2774323-2774342 None:intergenic 30.0%
! ATGATGATGATGATAATGCT+GGG - chr8.1:2772469-2772488 MS.gene035599:intron 30.0%
! ATGGAGCTTTTGATGTAAAT+AGG - chr8.1:2772181-2772200 MS.gene035599:intron 30.0%
! GAGAATGATAGTGTAAACAA+TGG - chr8.1:2772162-2772181 MS.gene035599:intron 30.0%
! GTTGTATTTGTTGGAGTTAA+TGG - chr8.1:2773793-2773812 MS.gene035599:intron 30.0%
! TTGTCATAGTTGAATGGTTT+TGG - chr8.1:2774841-2774860 MS.gene035599:CDS 30.0%
!! GTTGGTAATGTTAGTGTAAA+TGG - chr8.1:2772135-2772154 MS.gene035599:intron 30.0%
!! TATGTTTGATTTTGTCAGGT+GGG - chr8.1:2775584-2775603 MS.gene035599:CDS 30.0%
!! TTATGTTTGATTTTGTCAGG+TGG - chr8.1:2775583-2775602 MS.gene035599:CDS 30.0%
!!! CGTGTTTTGAAAAATAATGC+AGG - chr8.1:2773669-2773688 MS.gene035599:intron 30.0%
!!! GTTTTGAAAAATAATGCAGG+CGG - chr8.1:2773672-2773691 MS.gene035599:intron 30.0%
AAATATAGGGATCTGAAAGG+GGG + chr8.1:2774131-2774150 None:intergenic 35.0%
AACAGAATCCCCTTAAGAAA+TGG - chr8.1:2774561-2774580 MS.gene035599:intron 35.0%
AACATCAATCGGAATCTATG+AGG + chr8.1:2772662-2772681 None:intergenic 35.0%
AACTGTTTCATTCAGTTAGG+CGG + chr8.1:2774472-2774491 None:intergenic 35.0%
AAGAAGGTTAGGAATAAAGG+CGG - chr8.1:2772210-2772229 MS.gene035599:CDS 35.0%
AAGACAAAATAAAGGGAAGG+GGG + chr8.1:2775468-2775487 None:intergenic 35.0%
AAGATCCCATCAATCAATCT+GGG + chr8.1:2775211-2775230 None:intergenic 35.0%
AAGCCTGATGCTAAAAAGAA+GGG - chr8.1:2772501-2772520 MS.gene035599:intron 35.0%
AAGTCTTGAAGGCAAAAAAC+TGG - chr8.1:2773532-2773551 MS.gene035599:CDS 35.0%
AATATGTCAATAGAACGCCT+AGG + chr8.1:2773730-2773749 None:intergenic 35.0%
ATAAAACCGGTATTAATCCC+GGG + chr8.1:2774359-2774378 None:intergenic 35.0%
ATCCTCAACATCATTAGATG+TGG - chr8.1:2773380-2773399 MS.gene035599:intron 35.0%
ATCTGAAAGGGGGAATTATA+AGG + chr8.1:2774121-2774140 None:intergenic 35.0%
ATTCATTCGATGCTTTCTTG+TGG + chr8.1:2775404-2775423 None:intergenic 35.0%
ATTCGTTTGAAAGTCAGGAA+AGG - chr8.1:2772938-2772957 MS.gene035599:intron 35.0%
CAAATATAGGGATCTGAAAG+GGG + chr8.1:2774132-2774151 None:intergenic 35.0%
CAGAAGAAGGTTAGGAATAA+AGG - chr8.1:2772207-2772226 MS.gene035599:CDS 35.0%
CAGATCCCTATATTTGAGAA+GGG - chr8.1:2774136-2774155 MS.gene035599:intron 35.0%
CTATCACTGTTTCAGTTTCT+AGG - chr8.1:2774756-2774775 MS.gene035599:CDS 35.0%
CTCAAATATAGGGATCTGAA+AGG + chr8.1:2774134-2774153 None:intergenic 35.0%
CTGATCAAAATCTCGATACA+CGG + chr8.1:2771851-2771870 None:intergenic 35.0%
CTGCATAATCACACAGAAAA+TGG + chr8.1:2773929-2773948 None:intergenic 35.0%
CTTTATTCCTAACCTTCTTC+TGG + chr8.1:2772209-2772228 None:intergenic 35.0%
GAAAATGGAATATCTCCTTC+AGG + chr8.1:2773914-2773933 None:intergenic 35.0%
GATTATTTGGCTAAGGAACA+AGG - chr8.1:2772387-2772406 MS.gene035599:intron 35.0%
GCAAAGACAAAATAAAGGGA+AGG + chr8.1:2775471-2775490 None:intergenic 35.0%
GCACATATGTCTTAAAGCAA+AGG + chr8.1:2772875-2772894 None:intergenic 35.0%
GCGTTCTATTGACATATTGA+GGG - chr8.1:2773732-2773751 MS.gene035599:CDS 35.0%
GGAGACTGTCCATTTAATAT+GGG - chr8.1:2775352-2775371 MS.gene035599:CDS 35.0%
GGATTTGAAGAAATCGAATC+CGG - chr8.1:2771912-2771931 MS.gene035599:intron 35.0%
GGGTTCAATAACAGACATAT+GGG + chr8.1:2775142-2775161 None:intergenic 35.0%
TAAGTGCATAAAAGATTGGG+AGG + chr8.1:2774536-2774555 None:intergenic 35.0%
TACTAATCTTGCTAAGGTGA+AGG - chr8.1:2773828-2773847 MS.gene035599:intron 35.0%
TAGAGGTTCCATTTCTTAAG+GGG + chr8.1:2774572-2774591 None:intergenic 35.0%
TCAAGCAACACAACATCAAT+CGG + chr8.1:2772673-2772692 None:intergenic 35.0%
TCAATCAAAGTAGCAGATCA+AGG + chr8.1:2773159-2773178 None:intergenic 35.0%
TCACAAGGAAAATGGAAACA+GGG + chr8.1:2773093-2773112 None:intergenic 35.0%
TCAGATCCCTATATTTGAGA+AGG - chr8.1:2774135-2774154 MS.gene035599:intron 35.0%
TGAGATGGAAACAAAATCAG+CGG + chr8.1:2775432-2775451 None:intergenic 35.0%
TGGGTTCAATAACAGACATA+TGG + chr8.1:2775143-2775162 None:intergenic 35.0%
TTCATCTTACATGTCACTGA+TGG - chr8.1:2774919-2774938 MS.gene035599:CDS 35.0%
TTGGTATTCGTTTGAAAGTC+AGG - chr8.1:2772933-2772952 MS.gene035599:intron 35.0%
TTTCAAAGTTCAACCAGGTT+AGG - chr8.1:2775058-2775077 MS.gene035599:CDS 35.0%
TTTCTTAAGGGGATTCTGTT+AGG + chr8.1:2774561-2774580 None:intergenic 35.0%
TTTGTTGGAGTTAATGGAGT+TGG - chr8.1:2773799-2773818 MS.gene035599:intron 35.0%
! ACGGTAACGGTTATAATTTG+AGG - chr8.1:2772100-2772119 MS.gene035599:intron 35.0%
! CATTTTCTGTGTGATTATGC+AGG - chr8.1:2773927-2773946 MS.gene035599:CDS 35.0%
! GAAGGTTGATTATTTGGCTA+AGG - chr8.1:2772380-2772399 MS.gene035599:intron 35.0%
! GATCGAATCAATGTATCGAT+CGG + chr8.1:2771625-2771644 None:intergenic 35.0%
! GATGATGATGATGATAATGC+TGG - chr8.1:2772468-2772487 MS.gene035599:intron 35.0%
! GGATAGGAAGGTTGATTATT+TGG - chr8.1:2772374-2772393 MS.gene035599:intron 35.0%
! GTTCGACACTATTGATGATA+AGG - chr8.1:2775240-2775259 MS.gene035599:CDS 35.0%
! TCTTTTTCCCTATCGACATT+TGG - chr8.1:2773599-2773618 MS.gene035599:intron 35.0%
! TGAACATTTATTGGTTGGCT+AGG - chr8.1:2775327-2775346 MS.gene035599:CDS 35.0%
! TGGACTTTTCACAATGATCT+AGG - chr8.1:2771718-2771737 MS.gene035599:intron 35.0%
! TGTTTCCATTTTCCTTGTGA+CGG - chr8.1:2773093-2773112 MS.gene035599:CDS 35.0%
!! TTACATTCTGTGTCACTTGT+AGG - chr8.1:2773469-2773488 MS.gene035599:CDS 35.0%
!!! CAGTTACTGATTTTCACAAG+AGG - chr8.1:2771547-2771566 MS.gene035599:CDS 35.0%
!!! GATTTTTAGTAGTGACAGTG+AGG - chr8.1:2772434-2772453 MS.gene035599:intron 35.0%
!!! TGGTTCGTATTTTAACTCCT+AGG - chr8.1:2773710-2773729 MS.gene035599:CDS 35.0%
!!! TTACTGATTTTCACAAGAGG+AGG - chr8.1:2771550-2771569 MS.gene035599:CDS 35.0%
AAAAATAATGCAGGCGGCAA+TGG - chr8.1:2773678-2773697 MS.gene035599:intron 40.0%
AAAATCTCGATACACGGTTC+TGG + chr8.1:2771845-2771864 None:intergenic 40.0%
AAATTGAGCCACGCTCTTAT+AGG - chr8.1:2774395-2774414 MS.gene035599:intron 40.0%
AAGCAATTCAGGAAGCTTCA+CGG - chr8.1:2774191-2774210 MS.gene035599:intron 40.0%
AAGTTCAGCAAGTTTACCTC+TGG + chr8.1:2772545-2772564 None:intergenic 40.0%
AATTCTGCATCTGCTCTATG+TGG - chr8.1:2771768-2771787 MS.gene035599:intron 40.0%
ACGGATCATGTTGATGTTGA+TGG - chr8.1:2772339-2772358 MS.gene035599:intron 40.0%
ACTTGACGTTGAGTTTCTTG+AGG + chr8.1:2775682-2775701 None:intergenic 40.0%
AGAAGACTTAAGAGAGCTGA+TGG + chr8.1:2774610-2774629 None:intergenic 40.0%
AGAAGGTTAGGAATAAAGGC+GGG - chr8.1:2772211-2772230 MS.gene035599:CDS 40.0%
AGTAGGATATTCCTCTCTGA+AGG + chr8.1:2774449-2774468 None:intergenic 40.0%
AGTATAGAGTATACCCTCCA+AGG - chr8.1:2774663-2774682 MS.gene035599:intron 40.0%
ATTCTTGTGCTCAGTATTGC+TGG - chr8.1:2773271-2773290 MS.gene035599:CDS 40.0%
CAAGATCCCATCAATCAATC+TGG + chr8.1:2775212-2775231 None:intergenic 40.0%
CAAGCCTGATGCTAAAAAGA+AGG - chr8.1:2772500-2772519 MS.gene035599:intron 40.0%
CAATTTCATTGCATGACCAG+AGG + chr8.1:2771582-2771601 None:intergenic 40.0%
CACCACATCTAATGATGTTG+AGG + chr8.1:2773385-2773404 None:intergenic 40.0%
CGGAGACTGTCCATTTAATA+TGG - chr8.1:2775351-2775370 MS.gene035599:CDS 40.0%
CGGATCATGTTGATGTTGAT+GGG - chr8.1:2772340-2772359 MS.gene035599:intron 40.0%
CTACACCCAGATTGATTGAT+GGG - chr8.1:2775203-2775222 MS.gene035599:CDS 40.0%
CTCAACATCATTAGATGTGG+TGG - chr8.1:2773383-2773402 MS.gene035599:intron 40.0%
CTCTGGTCATGCAATGAAAT+TGG - chr8.1:2771580-2771599 MS.gene035599:CDS 40.0%
CTGATGCTAAAAAGAAGGGT+TGG - chr8.1:2772505-2772524 MS.gene035599:intron 40.0%
CTTCTCCAACAAATAAGACC+AGG + chr8.1:2775008-2775027 None:intergenic 40.0%
GAGCTGCTTATTCTCTCAAA+TGG - chr8.1:2771698-2771717 MS.gene035599:intron 40.0%
GATTCGATCTTGTCTTCTAG+AGG - chr8.1:2771636-2771655 MS.gene035599:CDS 40.0%
GCTTGTGATACATTTCGATC+AGG - chr8.1:2773994-2774013 MS.gene035599:intron 40.0%
GGATCATGTTGATGTTGATG+GGG - chr8.1:2772341-2772360 MS.gene035599:intron 40.0%
GGCGTTCTATTGACATATTG+AGG - chr8.1:2773731-2773750 MS.gene035599:CDS 40.0%
GTACTATCTCATGACAGCAA+AGG + chr8.1:2774782-2774801 None:intergenic 40.0%
GTCACAAGGAAAATGGAAAC+AGG + chr8.1:2773094-2773113 None:intergenic 40.0%
GTTTGAAGAATGACGGTGAT+GGG - chr8.1:2772028-2772047 MS.gene035599:CDS 40.0%
TAAAAAGCAAGCCCGACATA+CGG + chr8.1:2773890-2773909 None:intergenic 40.0%
TAAAAGATTGGGAGGATAGC+TGG + chr8.1:2774528-2774547 None:intergenic 40.0%
TAGACTCATGACCAAGAATG+TGG - chr8.1:2773348-2773367 MS.gene035599:intron 40.0%
TCAGCTTTCAAAGTTCAACC+AGG - chr8.1:2775053-2775072 MS.gene035599:CDS 40.0%
TCATGGCCCGTTTCATTATT+GGG - chr8.1:2774723-2774742 MS.gene035599:CDS 40.0%
TCTTACAATTACGATGCACC+TGG - chr8.1:2771676-2771695 MS.gene035599:intron 40.0%
TGAAAAAGATCCTGCTGTTG+TGG - chr8.1:2774162-2774181 MS.gene035599:intron 40.0%
TGAGAAGCTATGTGAATCAG+TGG - chr8.1:2773505-2773524 MS.gene035599:CDS 40.0%
TGATGATTTACTGCAAGTGG+TGG - chr8.1:2772795-2772814 MS.gene035599:intron 40.0%
TGATTATGCAGGTTGCTTAC+TGG - chr8.1:2773938-2773957 MS.gene035599:CDS 40.0%
TGTAAATAGGCTCCAGAAGA+AGG - chr8.1:2772194-2772213 MS.gene035599:CDS 40.0%
TGTGGCAAAAGAAGCAATTC+AGG - chr8.1:2774180-2774199 MS.gene035599:intron 40.0%
TTCATGCTGCAAAAGAGCAA+AGG - chr8.1:2773758-2773777 MS.gene035599:intron 40.0%
TTCATGGCCCGTTTCATTAT+TGG - chr8.1:2774722-2774741 MS.gene035599:CDS 40.0%
TTCTTGTGCTCAGTATTGCT+GGG - chr8.1:2773272-2773291 MS.gene035599:CDS 40.0%
TTGGTTATCTGTTAGGAACC+CGG - chr8.1:2774338-2774357 MS.gene035599:intron 40.0%
TTTGAAGAAATCGAATCCGG+TGG - chr8.1:2771915-2771934 MS.gene035599:intron 40.0%
TTTGACAGTGCTCTCATCAA+TGG + chr8.1:2774961-2774980 None:intergenic 40.0%
! ACATGTCACTGATGGTTTTC+AGG - chr8.1:2774927-2774946 MS.gene035599:CDS 40.0%
! CATTTATTGGTTGGCTAGGA+CGG - chr8.1:2775331-2775350 MS.gene035599:CDS 40.0%
! CTTATTTGTTGGAGAAGCAC+TGG - chr8.1:2775011-2775030 MS.gene035599:CDS 40.0%
! GAAATTGGCAACGCTTTGAA+AGG - chr8.1:2771595-2771614 MS.gene035599:CDS 40.0%
! GGTTTTCATCTATGTTCCAG+AGG - chr8.1:2772526-2772545 MS.gene035599:intron 40.0%
! TCTGGAGCCCAATAATGAAA+CGG + chr8.1:2774733-2774752 None:intergenic 40.0%
! TTGGAGGGTATACTCTATAC+TGG + chr8.1:2774664-2774683 None:intergenic 40.0%
!! AATGACGGTGATGGGAAAAA+TGG - chr8.1:2772036-2772055 MS.gene035599:CDS 40.0%
!! ATGACGGTGATGGGAAAAAT+GGG - chr8.1:2772037-2772056 MS.gene035599:CDS 40.0%
!! CAACCCTTCTTTTTAGCATC+AGG + chr8.1:2772507-2772526 None:intergenic 40.0%
!! TTTAAGGAGCGTCTTCACAA+TGG + chr8.1:2775705-2775724 None:intergenic 40.0%
AAACAGCAGGTCACATGGAA+GGG - chr8.1:2771955-2771974 MS.gene035599:intron 45.0%
AAATCGAATCCGGTGGTTGT+AGG - chr8.1:2771922-2771941 MS.gene035599:intron 45.0%
AACAGACGCTGTTGTAACCA+AGG - chr8.1:2772245-2772264 MS.gene035599:CDS 45.0%
AAGGATATCTTCCACAGTGC+AGG - chr8.1:2773565-2773584 MS.gene035599:intron 45.0%
AGACCAGGTCAGGATTGTTA+AGG + chr8.1:2774993-2775012 None:intergenic 45.0%
AGAGCTGATGGTTAATGACG+TGG + chr8.1:2774598-2774617 None:intergenic 45.0%
AGAGTATACCCTCCAAGGTT+TGG - chr8.1:2774630-2774649 MS.gene035599:intron 45.0%
ATAGGAAACAGCAGGTCACA+TGG - chr8.1:2771950-2771969 MS.gene035599:intron 45.0%
ATAGGCTCCAGAAGAAGGTT+AGG - chr8.1:2772199-2772218 MS.gene035599:CDS 45.0%
ATTCAGGAAGCTTCACGGAA+TGG - chr8.1:2774196-2774215 MS.gene035599:intron 45.0%
CAAGAGGAGGATTAATCCTC+TGG - chr8.1:2771563-2771582 MS.gene035599:CDS 45.0%
CAAGTCCGACTTCTCCAAAT+TGG + chr8.1:2773302-2773321 None:intergenic 45.0%
CAATTTGGAGAAGTCGGACT+TGG - chr8.1:2773300-2773319 MS.gene035599:intron 45.0%
CCAACAAATAAGACCAGGTC+AGG + chr8.1:2775003-2775022 None:intergenic 45.0%
CCACAATCTGATCCTCTTCA+TGG - chr8.1:2774706-2774725 MS.gene035599:intron 45.0%
CCATCAATCAATCTGGGTGT+AGG + chr8.1:2775205-2775224 None:intergenic 45.0%
CCATGAAGAGGATCAGATTG+TGG + chr8.1:2774709-2774728 None:intergenic 45.0%
CCTACACCCAGATTGATTGA+TGG - chr8.1:2775202-2775221 MS.gene035599:CDS 45.0%
CGATACCGTCACAAGGAAAA+TGG + chr8.1:2773101-2773120 None:intergenic 45.0%
CTACCTTAACAATCCTGACC+TGG - chr8.1:2774987-2775006 MS.gene035599:CDS 45.0%
CTGAAACAGTGATAGAGCTC+TGG + chr8.1:2774751-2774770 None:intergenic 45.0%
CTGGAGCCCAATAATGAAAC+GGG + chr8.1:2774732-2774751 None:intergenic 45.0%
GAAGGCCAATTTGGAGAAGT+CGG - chr8.1:2773294-2773313 MS.gene035599:CDS 45.0%
GACGTTGAGTTTCTTGAGGT+CGG + chr8.1:2775678-2775697 None:intergenic 45.0%
GAGGATCAGATTGTGGATAC+TGG + chr8.1:2774702-2774721 None:intergenic 45.0%
GAGTATACCCTCCAAGGTTT+GGG - chr8.1:2774631-2774650 MS.gene035599:intron 45.0%
GAGTTTCTTGAGGTCGGTAT+AGG + chr8.1:2775672-2775691 None:intergenic 45.0%
GCAGTTGAAGATTGAAGCTG+AGG - chr8.1:2771879-2771898 MS.gene035599:intron 45.0%
GGTTAATGACGTGGCATTAG+AGG + chr8.1:2774589-2774608 None:intergenic 45.0%
GGTTTGAAGAATGACGGTGA+TGG - chr8.1:2772027-2772046 MS.gene035599:CDS 45.0%
GTTAGGAATAAAGGCGGGAA+TGG - chr8.1:2772216-2772235 MS.gene035599:CDS 45.0%
TAATGAAACGGGCCATGAAG+AGG + chr8.1:2774721-2774740 None:intergenic 45.0%
TAGAAACCAAACCTGCACTG+TGG + chr8.1:2773579-2773598 None:intergenic 45.0%
TAGGAACCCGGGATTAATAC+CGG - chr8.1:2774350-2774369 MS.gene035599:intron 45.0%
TAGTGACAGTGAGGATGAAG+AGG - chr8.1:2772443-2772462 MS.gene035599:intron 45.0%
TATCTTCCACAGTGCAGGTT+TGG - chr8.1:2773570-2773589 MS.gene035599:intron 45.0%
TATTGCTGGGAAGGCCAATT+TGG - chr8.1:2773285-2773304 MS.gene035599:CDS 45.0%
TCCTTCAGAGCTTTCAAAGC+TGG + chr8.1:2773328-2773347 None:intergenic 45.0%
TGGTTATCTGTTAGGAACCC+GGG - chr8.1:2774339-2774358 MS.gene035599:intron 45.0%
TGTTAAGCGTGAATTCTCGC+AGG - chr8.1:2771807-2771826 MS.gene035599:intron 45.0%
TTCATTCAGTTAGGCGGAGT+AGG + chr8.1:2774466-2774485 None:intergenic 45.0%
TTGAGAGAATAAGCAGCTCC+AGG + chr8.1:2771697-2771716 None:intergenic 45.0%
! AGCTTTGTCCAACTCCAGTT+GGG - chr8.1:2775099-2775118 MS.gene035599:CDS 45.0%
! GGAACAAGGTGAGAGTATGA+TGG - chr8.1:2772401-2772420 MS.gene035599:intron 45.0%
! GTTGCTTTCCTATAAGAGCG+TGG + chr8.1:2774406-2774425 None:intergenic 45.0%
! TGTTGATGTTGATGGGGATG+CGG - chr8.1:2772347-2772366 MS.gene035599:intron 45.0%
!! AAAGGTGTCAGGGGCATATA+TGG - chr8.1:2772956-2772975 MS.gene035599:intron 45.0%
!! AAAGTCAGGAAAGGTGTCAG+GGG - chr8.1:2772947-2772966 MS.gene035599:intron 45.0%
!! ACCAGCTTTGAAAGCTCTGA+AGG - chr8.1:2773324-2773343 MS.gene035599:intron 45.0%
!! CCTGACCTGGTCTTATTTGT+TGG - chr8.1:2775000-2775019 MS.gene035599:CDS 45.0%
!! CTTCTAGAGTATACCCTCCA+AGG - chr8.1:2774625-2774644 MS.gene035599:intron 45.0%
!! GAAAGTCAGGAAAGGTGTCA+GGG - chr8.1:2772946-2772965 MS.gene035599:intron 45.0%
!! TAGCTTTGTCCAACTCCAGT+TGG - chr8.1:2775098-2775117 MS.gene035599:CDS 45.0%
!! TGAAAGTCAGGAAAGGTGTC+AGG - chr8.1:2772945-2772964 MS.gene035599:intron 45.0%
!! TTGAGGAGTAACGGTGTTGT+TGG - chr8.1:2772117-2772136 MS.gene035599:intron 45.0%
!! TTTGTTGGAGAAGCACTGGT+TGG - chr8.1:2775015-2775034 MS.gene035599:CDS 45.0%
!!! GGGCTTGCTTTTTAACCTGA+AGG - chr8.1:2773896-2773915 MS.gene035599:CDS 45.0%
AACCAAGGCTGAGCCGAAAA+AGG - chr8.1:2772260-2772279 MS.gene035599:CDS 50.0%
AAGAGAGACGAAGACCCAAC+TGG + chr8.1:2775116-2775135 None:intergenic 50.0%
AGGTGGGAATAGGAAACAGC+AGG - chr8.1:2771942-2771961 MS.gene035599:intron 50.0%
ATGGGGATGCGGATAAGGAT+AGG - chr8.1:2772358-2772377 MS.gene035599:intron 50.0%
CAATCTGGGTGTAGGAGATG+TGG + chr8.1:2775197-2775216 None:intergenic 50.0%
CCAGTCATGTTTGTGGGATG+CGG - chr8.1:2775641-2775660 MS.gene035599:CDS 50.0%
CCTTGTGACGGTATCGTCTT+GGG - chr8.1:2773105-2773124 MS.gene035599:CDS 50.0%
CTATTCCCACCTACAACCAC+CGG + chr8.1:2771934-2771953 None:intergenic 50.0%
GAAACAGCAGGTCACATGGA+AGG - chr8.1:2771954-2771973 MS.gene035599:intron 50.0%
GGAAGCTTCACGGAATGGTT+CGG - chr8.1:2774201-2774220 MS.gene035599:intron 50.0%
GGAAGGGAGATGGATCTGAT+GGG - chr8.1:2771971-2771990 MS.gene035599:intron 50.0%
GGAGCTCCAGTCATGTTTGT+GGG - chr8.1:2775635-2775654 MS.gene035599:CDS 50.0%
GGATGCGGATAAGGATAGGA+AGG - chr8.1:2772362-2772381 MS.gene035599:intron 50.0%
GGCGAAATACATGGGTGAGA+TGG + chr8.1:2775447-2775466 None:intergenic 50.0%
GGCGGTGGTTTGAAGAATGA+CGG - chr8.1:2772021-2772040 MS.gene035599:CDS 50.0%
GTCGGCACCAAATGTCGATA+GGG + chr8.1:2773609-2773628 None:intergenic 50.0%
TCAGTGGCAGCAAGTCTTGA+AGG - chr8.1:2773521-2773540 MS.gene035599:CDS 50.0%
TCCTTGTGACGGTATCGTCT+TGG - chr8.1:2773104-2773123 MS.gene035599:CDS 50.0%
TGGAAGGGAGATGGATCTGA+TGG - chr8.1:2771970-2771989 MS.gene035599:intron 50.0%
TGGAGCTCCAGTCATGTTTG+TGG - chr8.1:2775634-2775653 MS.gene035599:CDS 50.0%
TGGGTGTAGGAGATGTGGAA+AGG + chr8.1:2775192-2775211 None:intergenic 50.0%
TGTGCTCAGTATTGCTGGGA+AGG - chr8.1:2773276-2773295 MS.gene035599:CDS 50.0%
! AAGAAGAATGCCAGTGCTGG+TGG - chr8.1:2771994-2772013 MS.gene035599:intron 50.0%
! ATCTCGATACACGGTTCTGG+TGG + chr8.1:2771842-2771861 None:intergenic 50.0%
! ATTCCTCTCTGAAGGAGCCT+TGG + chr8.1:2774441-2774460 None:intergenic 50.0%
! GCTTCTTTTGCCACAACAGC+AGG + chr8.1:2774175-2774194 None:intergenic 50.0%
! TCTCGATACACGGTTCTGGT+GGG + chr8.1:2771841-2771860 None:intergenic 50.0%
! TGTCTTCTAGAGGAGCGATC+TGG - chr8.1:2771646-2771665 MS.gene035599:intron 50.0%
! TGTTGATGGGGATGCGGATA+AGG - chr8.1:2772353-2772372 MS.gene035599:intron 50.0%
!! TCTGTGTCACTTGTAGGCTG+AGG - chr8.1:2773475-2773494 MS.gene035599:CDS 50.0%
!!! TACCTTTTTCGGCTCAGCCT+TGG + chr8.1:2772265-2772284 None:intergenic 50.0%
ACCCTCCAAGGTTTGCGATG+TGG - chr8.1:2774637-2774656 MS.gene035599:intron 55.0%
AGGGAAGGGGGCGAAATACA+TGG + chr8.1:2775456-2775475 None:intergenic 55.0%
CAGGAGCTGTTGAGCAGTTG+CGG - chr8.1:2774013-2774032 MS.gene035599:intron 55.0%
CAGGTCACATGGAAGGGAGA+TGG - chr8.1:2771961-2771980 MS.gene035599:intron 55.0%
CCCAAGACGATACCGTCACA+AGG + chr8.1:2773108-2773127 None:intergenic 55.0%
CCCACATCCCAAACCTTGGA+GGG + chr8.1:2774679-2774698 None:intergenic 55.0%
CCCACATCGCAAACCTTGGA+GGG + chr8.1:2774641-2774660 None:intergenic 55.0%
CCCTCCAAGGTTTGCGATGT+GGG - chr8.1:2774638-2774657 MS.gene035599:intron 55.0%
CCGCATCCCACAAACATGAC+TGG + chr8.1:2775644-2775663 None:intergenic 55.0%
CGAATCCGGTGGTTGTAGGT+GGG - chr8.1:2771926-2771945 MS.gene035599:intron 55.0%
CGGTGGTTGTAGGTGGGAAT+AGG - chr8.1:2771932-2771951 MS.gene035599:intron 55.0%
GACGAAGACCCAACTGGAGT+TGG + chr8.1:2775110-2775129 None:intergenic 55.0%
GGGAAGAAGAATGCCAGTGC+TGG - chr8.1:2771991-2772010 MS.gene035599:intron 55.0%
GGGAAGGGGGCGAAATACAT+GGG + chr8.1:2775455-2775474 None:intergenic 55.0%
GGTCGGCACCAAATGTCGAT+AGG + chr8.1:2773610-2773629 None:intergenic 55.0%
GGTGGGAGCTGCACTTTCAA+TGG - chr8.1:2775601-2775620 MS.gene035599:CDS 55.0%
GTTGTGCTAGTCGACACAGC+TGG - chr8.1:2774226-2774245 MS.gene035599:intron 55.0%
TCGAATCCGGTGGTTGTAGG+TGG - chr8.1:2771925-2771944 MS.gene035599:intron 55.0%
TCTAGAGGAGCGATCTGGTG+CGG - chr8.1:2771651-2771670 MS.gene035599:intron 55.0%
TCTGAAGGAGCCTTGGCTCA+GGG + chr8.1:2774434-2774453 None:intergenic 55.0%
TGAAGCTGAGGCTCGTTCTG+AGG - chr8.1:2771891-2771910 MS.gene035599:intron 55.0%
! ACCCTCCAAGGTTTGGGATG+TGG - chr8.1:2774675-2774694 MS.gene035599:intron 55.0%
! CCCTCCAAGGTTTGGGATGT+GGG - chr8.1:2774676-2774695 MS.gene035599:intron 55.0%
!! AAGAATGCCAGTGCTGGTGG+TGG - chr8.1:2771997-2772016 MS.gene035599:intron 55.0%
AGTTGCGGACTCATGCACGC+AGG - chr8.1:2774028-2774047 MS.gene035599:intron 60.0%
CGACACAGCTGGTCGTATGC+AGG - chr8.1:2774237-2774256 MS.gene035599:intron 60.0%
CTGGCCCACATCCCAAACCT+TGG + chr8.1:2774683-2774702 None:intergenic 60.0%
CTGGCCCACATCGCAAACCT+TGG + chr8.1:2774645-2774664 None:intergenic 60.0%
GACTCATGCACGCAGGCTTC+AGG - chr8.1:2774035-2774054 MS.gene035599:intron 60.0%
GAGCCAAGGCTCCTTCAGAG+AGG - chr8.1:2774435-2774454 MS.gene035599:intron 60.0%
GCAACAGACACCCTGAGCCA+AGG - chr8.1:2774421-2774440 MS.gene035599:intron 60.0%
GCCCACATCCCAAACCTTGG+AGG + chr8.1:2774680-2774699 None:intergenic 60.0%
GCCCACATCGCAAACCTTGG+AGG + chr8.1:2774642-2774661 None:intergenic 60.0%
! CTCTGAAGGAGCCTTGGCTC+AGG + chr8.1:2774435-2774454 None:intergenic 60.0%
!! AATGCCAGTGCTGGTGGTGG+TGG - chr8.1:2772000-2772019 MS.gene035599:intron 60.0%
GGCGGCAATGGAAGACGCAC+TGG - chr8.1:2773690-2773709 MS.gene035599:CDS 65.0%
ACCGCCACCACCACCAGCAC+TGG + chr8.1:2772007-2772026 None:intergenic 70.0%
!! AGTGCTGGTGGTGGTGGCGG+TGG - chr8.1:2772006-2772025 MS.gene035599:CDS 70.0%
!! GCCAGTGCTGGTGGTGGTGG+CGG - chr8.1:2772003-2772022 MS.gene035599:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 2771538 2775727 2771538 ID=MS.gene035599
chr8.1 mRNA 2771538 2775727 2771538 ID=MS.gene035599.t1;Parent=MS.gene035599
chr8.1 exon 2774718 2775727 2774718 ID=MS.gene035599.t1.exon1;Parent=MS.gene035599.t1
chr8.1 CDS 2774718 2775727 2774718 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2773896 2773980 2773896 ID=MS.gene035599.t1.exon2;Parent=MS.gene035599.t1
chr8.1 CDS 2773896 2773980 2773896 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2773679 2773774 2773679 ID=MS.gene035599.t1.exon3;Parent=MS.gene035599.t1
chr8.1 CDS 2773679 2773774 2773679 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2773422 2773574 2773422 ID=MS.gene035599.t1.exon4;Parent=MS.gene035599.t1
chr8.1 CDS 2773422 2773574 2773422 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2773209 2773316 2773209 ID=MS.gene035599.t1.exon5;Parent=MS.gene035599.t1
chr8.1 CDS 2773209 2773316 2773209 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2773007 2773126 2773007 ID=MS.gene035599.t1.exon6;Parent=MS.gene035599.t1
chr8.1 CDS 2773007 2773126 2773007 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2772191 2772316 2772191 ID=MS.gene035599.t1.exon7;Parent=MS.gene035599.t1
chr8.1 CDS 2772191 2772316 2772191 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2772004 2772087 2772004 ID=MS.gene035599.t1.exon8;Parent=MS.gene035599.t1
chr8.1 CDS 2772004 2772087 2772004 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
chr8.1 exon 2771538 2771663 2771538 ID=MS.gene035599.t1.exon9;Parent=MS.gene035599.t1
chr8.1 CDS 2771538 2771663 2771538 ID=cds.MS.gene035599.t1;Parent=MS.gene035599.t1
Gene Sequence

>MS.gene035599

ATGTTAGAGCAGTTACTGATTTTCACAAGAGGAGGATTAATCCTCTGGTCATGCAATGAAATTGGCAACGCTTTGAAAGGATCACCGATCGATACATTGATTCGATCTTGTCTTCTAGAGGAGCGATCTGGTGCGGCATCTTACAATTACGATGCACCTGGAGCTGCTTATTCTCTCAAATGGACTTTTCACAATGATCTAGGTCTTGTTTTCGTTGCTGTTTATCAGAGAATTCTGCATCTGCTCTATGTGGATGATTTGCTTGCTGCTGTTAAGCGTGAATTCTCGCAGGTTTATGATCCCACCAGAACCGTGTATCGAGATTTTGATCAGATTTTTAAGCAGTTGAAGATTGAAGCTGAGGCTCGTTCTGAGGATTTGAAGAAATCGAATCCGGTGGTTGTAGGTGGGAATAGGAAACAGCAGGTCACATGGAAGGGAGATGGATCTGATGGGAAGAAGAATGCCAGTGCTGGTGGTGGTGGCGGTGGTTTGAAGAATGACGGTGATGGGAAAAATGGGAAGAAGAATTCTGATAATGACCGTTCTGTTATTGTGAATAACGGTAACGGTTATAATTTGAGGAGTAACGGTGTTGTTGGTAATGTTAGTGTAAATGGTAAAGAGAATGATAGTGTAAACAATGGAGCTTTTGATGTAAATAGGCTCCAGAAGAAGGTTAGGAATAAAGGCGGGAATGGAAAGAAAACAGACGCTGTTGTAACCAAGGCTGAGCCGAAAAAGGTAGTTAAGAAAAATAGGGTTTGGGATGACAAACCCGTTGAAACTAAATTAGATTTTACGGATCATGTTGATGTTGATGGGGATGCGGATAAGGATAGGAAGGTTGATTATTTGGCTAAGGAACAAGGTGAGAGTATGATGGATAAAGATGAGATTTTTAGTAGTGACAGTGAGGATGAAGAGGATGATGATGATGATGATAATGCTGGGAAGAAGAGCAAGCCTGATGCTAAAAAGAAGGGTTGGTTTTCATCTATGTTCCAGAGGTAAACTTGCTGAACTTGATTAATTAGTTTTTAGTTTTTTTATTTTTTTTTATTTTTTTGTATATAAATTGAAAAGTTTGTGCTCTATTCAGATTTATGCTAAGTAGCTTACCTCATAGATTCCGATTGATGTTGTGTTGCTTGAATTAGTGAGAAGTGTTATATTTCCTTGAATTGGATTTTTTTGTCTGTTGCATTGTTTCTAATCGATGATTCCTTGACAATACTTTTATTGTTTTAATTCTAATGATGATTTACTGCAAGTGGTGGTAGCAATAGAAATTACACTCTAAACTTCCTTATTGAAATCTTATTCATAGTTGTCCTTTGCTTTAAGACATATGTGCATTATTAGGATGTCAAGCTTATTTAACTTGTAATGATATTGGTATTCGTTTGAAAGTCAGGAAAGGTGTCAGGGGCATATATGGATATGACAAAGCATAAATGAATGAATAAATTAAATTGTTACTCTTGGTCATAAATGAATTTCCTCTTACATGTTGCTTTGATTATTGTTTTTCTAAGATTTTGTGATGATGCCCTGTTTCCATTTTCCTTGTGACGGTATCGTCTTGGGTGAAATTTATTTTGTTGTTTGCAAATATCCTTGATCTGCTACTTTGATTGAATAATTTTACAACTTCACTTTGAAATTATTACTATTAGTTTATTTCAATTTTCAGCTTTTCATTGAAATGACTACTAATGAAGTTTATTTACATTCTTGTGCTCAGTATTGCTGGGAAGGCCAATTTGGAGAAGTCGGACTTGGAACCAGCTTTGAAAGCTCTGAAGGATAGACTCATGACCAAGAATGTGGTATGTATTTATCCTCAACATCATTAGATGTGGTGGCTTAAACATCTAAATTTTGTTCTATTGTCTTCTTTTTGCTCTTCTTAAGCTATATAATATTTTTTACATTCTGTGTCACTTGTAGGCTGAGGAAATAGCTGAGAAGCTATGTGAATCAGTGGCAGCAAGTCTTGAAGGCAAAAAACTGGCTTCATTTACAAGGATATCTTCCACAGTGCAGGTTTGGTTTCTATCTTTTTCCCTATCGACATTTGGTGCCGACCTTTTATTTATATACAATTTCACATTATTCATACTTATGCCGTGTTTTGAAAAATAATGCAGGCGGCAATGGAAGACGCACTGGTTCGTATTTTAACTCCTAGGCGTTCTATTGACATATTGAGGGATGTTCATGCTGCAAAAGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGAGTTAATGGAGTTGGAAAATCTACTAATCTTGCTAAGGTGAAGGACGTTCATATATTCTTCTTCTCTTTATGTAAAAATTCCGTATGTCGGGCTTGCTTTTTAACCTGAAGGAGATATTCCATTTTCTGTGTGATTATGCAGGTTGCTTACTGGCTTCAGCAACACAATGTTAATGTCATGATGGCTGCTTGTGATACATTTCGATCAGGAGCTGTTGAGCAGTTGCGGACTCATGCACGCAGGCTTCAGGTTTACATTGATTTTAGTGCTTAAAGATTAATACATATATTGTTAGTAATATTAATAATAACCTTATAATTCCCCCTTTCAGATCCCTATATTTGAGAAGGGTTATGAAAAAGATCCTGCTGTTGTGGCAAAAGAAGCAATTCAGGAAGCTTCACGGAATGGTTCGGATGTTGTGCTAGTCGACACAGCTGGTCGTATGCAGGTAATAATTGCAGTTGTTGTTGTAGCAAAAATTTATTGATTTTATGGGGGTGTACAATATACCAAATGACTCAATACTATTGGTTATCTGTTAGGAACCCGGGATTAATACCGGTTTTATATTGACTAACGAAAGGAAATTGAGCCACGCTCTTATAGGAAAGCAACAGACACCCTGAGCCAAGGCTCCTTCAGAGAGGAATATCCTACTCCGCCTAACTGAATGAAACAGTTACTAACTTCTAGAATGAATGGATATTAAGTGGTCCAGCTATCCTCCCAATCTTTTATGCACTTATTCCTAACAGAATCCCCTTAAGAAATGGAACCTCTAATGCCACGTCATTAACCATCAGCTCTCTTAAGTCTTCTAGAGTATACCCTCCAAGGTTTGCGATGTGGGCCAGTATAGAGTATACCCTCCAAGGTTTGGGATGTGGGCCAGTATCCACAATCTGATCCTCTTCATGGCCCGTTTCATTATTGGGCTCCAGAGCTCTATCACTGTTTCAGTTTCTAGGCCTTTGCTGTCATGAGATAGTACTGAAAATGAACCTTTTATGTTTATTGGAATAGAGGAAAATTGTCATAGTTGAATGGTTTTGGTTATATTTAGAGACTATTGACGATGTTTATTTAAATGCATTTATATGTTCATCACTTCATCTTACATGTCACTGATGGTTTTCAGGATAATGAACCATTGATGAGAGCACTGTCAAAGCTGATCTACCTTAACAATCCTGACCTGGTCTTATTTGTTGGAGAAGCACTGGTTGGCAATGATGCAGTTGATCAGCTTTCAAAGTTCAACCAGGTTAGGTTCAATATATTCAATAGTAGCTTTGTCCAACTCCAGTTGGGTCTTCGTCTCTCTTTTTCCCATATGTCTGTTATTGAACCCATTTATTTTGTTGCAGAAACTGGCTGACCTTTCCACATCTCCTACACCCAGATTGATTGATGGGATCTTGCTCACAAAGTTCGACACTATTGATGATAAGGTATGCAAATACTGGAATTGCAACTTTGCAAGTAAATTTATGGCTAAGCATTTGGATATTCTTGATGAACATTTATTGGTTGGCTAGGACGGAGACTGTCCATTTAATATGGGTAATGATTATTGTTACGAATTAATAGCCACAAGAAAGCATCGAATGAATCATGTCCGCTGATTTTGTTTCCATCTCACCCATGTATTTCGCCCCCTTCCCTTTATTTTGTCTTTGCTAGTTTTTATATGTGTTATTCTTGCTTTTCTTGCCAATTTCATTCGCAAGAAATAGCACTGCTCATTTAATATAGATGAAATCGTTTTCTAATTATGTTTGATTTTGTCAGGTGGGAGCTGCACTTTCAATGGTTTACATATCTGGAGCTCCAGTCATGTTTGTGGGATGCGGACAGTCCTATACCGACCTCAAGAAACTCAACGTCAAGTCCATTGTGAAGACGCTCCTTAAATGA

Protein sequence

>MS.gene035599.t1

MLEQLLIFTRGGLILWSCNEIGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYSLKWTFHNDLGLVFVAVYQRILHLLYVDDLLAAVKREFSQVYDPTRTVYRDFDQIFKQLKIEAEARSEDLKKSNPVVVGGNRKQQVTWKGDGSDGKKNASAGGGGGGLKNDGDGKNGKKNSDNDRSVIVNNGNGYNLRSNGVVGNVSVNGKENDSVNNGAFDVNRLQKKVRNKGGNGKKTDAVVTKAEPKKVVKKNRVWDDKPVETKLDFTDHVDVDGDADKDRKVDYLAKEQGESMMDKDEIFSSDSEDEEDDDDDDNAGKKSKPDAKKKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHNVNVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPTPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK