Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036285.t1 | RHN54855.1 | 98.3 | 297 | 5 | 0 | 1 | 297 | 2 | 298 | 1.20E-162 | 582.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036285.t1 | Q93XM7 | 75.7 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 1.5e-129 | 463.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036285.t1 | G7KF41 | 98.3 | 297 | 5 | 0 | 1 | 297 | 1 | 297 | 8.5e-163 | 582.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036285 | MS.gene052954 | PPI |
| MS.gene036285 | MS.gene068250 | PPI |
| MS.gene33379 | MS.gene036285 | PPI |
| MS.gene036285 | MS.gene24924 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036285.t1 | MTR_5g030530 | 98.316 | 297 | 5 | 0 | 1 | 297 | 1 | 297 | 0.0 | 593 |
| MS.gene036285.t1 | MTR_8g066975 | 84.175 | 297 | 47 | 0 | 1 | 297 | 1 | 297 | 0.0 | 515 |
| MS.gene036285.t1 | MTR_4g088545 | 35.256 | 312 | 176 | 9 | 1 | 297 | 1 | 301 | 1.31e-44 | 154 |
| MS.gene036285.t1 | MTR_2g102010 | 34.333 | 300 | 178 | 6 | 1 | 296 | 10 | 294 | 5.40e-43 | 149 |
| MS.gene036285.t1 | MTR_4g012850 | 32.526 | 289 | 177 | 6 | 6 | 291 | 14 | 287 | 4.13e-40 | 142 |
| MS.gene036285.t1 | MTR_4g088545 | 35.135 | 259 | 145 | 7 | 1 | 245 | 1 | 250 | 8.00e-35 | 127 |
| MS.gene036285.t1 | MTR_4g088545 | 27.461 | 193 | 128 | 4 | 106 | 293 | 10 | 195 | 1.65e-14 | 72.4 |
| MS.gene036285.t1 | MTR_4g088545 | 37.313 | 201 | 109 | 6 | 1 | 193 | 1 | 192 | 1.47e-29 | 112 |
| MS.gene036285.t1 | MTR_4g088545 | 27.461 | 193 | 128 | 4 | 106 | 293 | 10 | 195 | 5.72e-15 | 73.2 |
| MS.gene036285.t1 | MTR_8g027975 | 29.412 | 323 | 190 | 8 | 1 | 297 | 44 | 354 | 1.19e-28 | 113 |
| MS.gene036285.t1 | MTR_5g009500 | 28.931 | 318 | 190 | 7 | 4 | 297 | 34 | 339 | 1.14e-27 | 110 |
| MS.gene036285.t1 | MTR_5g009500 | 28.218 | 202 | 129 | 4 | 102 | 296 | 32 | 224 | 2.68e-12 | 66.6 |
| MS.gene036285.t1 | MTR_2g436930 | 29.154 | 319 | 185 | 11 | 9 | 296 | 16 | 324 | 2.69e-27 | 108 |
| MS.gene036285.t1 | MTR_7g109135 | 28.881 | 277 | 185 | 6 | 24 | 296 | 38 | 306 | 3.69e-26 | 105 |
| MS.gene036285.t1 | MTR_7g109135 | 30.539 | 167 | 109 | 2 | 111 | 275 | 25 | 186 | 5.89e-16 | 77.0 |
| MS.gene036285.t1 | MTR_4g119770 | 27.245 | 323 | 192 | 9 | 7 | 296 | 13 | 325 | 1.80e-25 | 103 |
| MS.gene036285.t1 | MTR_5g055410 | 28.571 | 280 | 182 | 8 | 24 | 296 | 37 | 305 | 1.71e-24 | 101 |
| MS.gene036285.t1 | MTR_5g055410 | 24.870 | 193 | 124 | 7 | 23 | 207 | 134 | 313 | 8.46e-11 | 62.4 |
| MS.gene036285.t1 | MTR_1g090330 | 27.437 | 277 | 190 | 6 | 24 | 297 | 30 | 298 | 2.30e-23 | 97.4 |
| MS.gene036285.t1 | MTR_1g090330 | 27.513 | 189 | 130 | 3 | 11 | 198 | 114 | 296 | 1.33e-14 | 73.2 |
| MS.gene036285.t1 | MTR_3g025800 | 27.778 | 324 | 189 | 13 | 4 | 297 | 24 | 332 | 9.68e-23 | 96.7 |
| MS.gene036285.t1 | MTR_1g087840 | 27.076 | 277 | 190 | 6 | 24 | 296 | 35 | 303 | 1.93e-22 | 95.1 |
| MS.gene036285.t1 | MTR_7g109135 | 29.237 | 236 | 155 | 6 | 65 | 296 | 1 | 228 | 5.77e-22 | 92.4 |
| MS.gene036285.t1 | MTR_4g114320 | 24.915 | 293 | 199 | 5 | 6 | 296 | 121 | 394 | 2.01e-21 | 93.6 |
| MS.gene036285.t1 | MTR_7g109135 | 27.437 | 277 | 182 | 6 | 24 | 296 | 38 | 299 | 4.05e-21 | 91.7 |
| MS.gene036285.t1 | MTR_7g109135 | 29.697 | 165 | 106 | 2 | 111 | 275 | 25 | 179 | 2.51e-12 | 66.6 |
| MS.gene036285.t1 | MTR_1g012030 | 26.421 | 299 | 187 | 7 | 6 | 296 | 137 | 410 | 6.77e-21 | 92.4 |
| MS.gene036285.t1 | MTR_3g104600 | 27.778 | 306 | 199 | 7 | 6 | 297 | 33 | 330 | 7.89e-21 | 91.3 |
| MS.gene036285.t1 | MTR_4g057850 | 29.371 | 286 | 177 | 9 | 10 | 286 | 24 | 293 | 2.83e-20 | 89.4 |
| MS.gene036285.t1 | MTR_4g057850 | 31.818 | 176 | 109 | 5 | 19 | 191 | 128 | 295 | 3.74e-16 | 77.8 |
| MS.gene036285.t1 | MTR_3g462140 | 31.449 | 283 | 169 | 10 | 24 | 296 | 31 | 298 | 3.33e-20 | 89.0 |
| MS.gene036285.t1 | MTR_3g462140 | 29.348 | 184 | 115 | 4 | 19 | 201 | 131 | 300 | 1.68e-15 | 75.5 |
| MS.gene036285.t1 | MTR_3g462140 | 28.502 | 207 | 138 | 6 | 96 | 296 | 4 | 206 | 7.74e-14 | 70.9 |
| MS.gene036285.t1 | MTR_7g066690 | 29.643 | 280 | 171 | 10 | 24 | 293 | 33 | 296 | 3.49e-20 | 89.0 |
| MS.gene036285.t1 | MTR_7g066690 | 26.020 | 196 | 132 | 2 | 4 | 199 | 117 | 299 | 9.49e-16 | 76.3 |
| MS.gene036285.t1 | MTR_7g066690 | 28.272 | 191 | 124 | 4 | 117 | 296 | 19 | 207 | 3.72e-14 | 72.0 |
| MS.gene036285.t1 | MTR_3g107510 | 26.087 | 299 | 188 | 7 | 6 | 296 | 120 | 393 | 4.44e-20 | 89.7 |
| MS.gene036285.t1 | MTR_4g018750 | 30.000 | 280 | 170 | 10 | 24 | 293 | 31 | 294 | 5.23e-20 | 88.6 |
| MS.gene036285.t1 | MTR_4g018750 | 26.000 | 200 | 133 | 3 | 1 | 198 | 110 | 296 | 1.15e-14 | 73.2 |
| MS.gene036285.t1 | MTR_4g018750 | 27.749 | 191 | 125 | 4 | 117 | 296 | 17 | 205 | 1.48e-14 | 73.2 |
| MS.gene036285.t1 | MTR_8g098240 | 27.397 | 292 | 183 | 9 | 10 | 297 | 322 | 588 | 6.25e-20 | 90.1 |
| MS.gene036285.t1 | MTR_6g091800 | 25.000 | 300 | 208 | 6 | 5 | 296 | 16 | 306 | 1.10e-19 | 87.8 |
| MS.gene036285.t1 | MTR_8g076760 | 25.965 | 285 | 180 | 11 | 23 | 290 | 29 | 299 | 7.46e-19 | 85.5 |
| MS.gene036285.t1 | MTR_8g076760 | 25.980 | 204 | 130 | 7 | 7 | 199 | 112 | 305 | 3.82e-13 | 68.9 |
| MS.gene036285.t1 | MTR_7g109135 | 29.717 | 212 | 137 | 6 | 89 | 296 | 4 | 207 | 9.45e-19 | 83.2 |
| MS.gene036285.t1 | MTR_6g034515 | 28.269 | 283 | 171 | 6 | 23 | 296 | 82 | 341 | 2.39e-18 | 84.3 |
| MS.gene036285.t1 | MTR_7g084400 | 27.000 | 300 | 181 | 10 | 8 | 296 | 213 | 485 | 6.02e-18 | 84.0 |
| MS.gene036285.t1 | MTR_3g104500 | 23.841 | 302 | 212 | 9 | 1 | 293 | 27 | 319 | 1.39e-17 | 82.0 |
| MS.gene036285.t1 | MTR_2g436930 | 27.984 | 243 | 143 | 9 | 76 | 296 | 2 | 234 | 1.80e-16 | 77.4 |
| MS.gene036285.t1 | MTR_3g098460 | 26.073 | 303 | 189 | 11 | 5 | 296 | 202 | 480 | 2.16e-16 | 79.3 |
| MS.gene036285.t1 | MTR_6g091800 | 23.620 | 326 | 204 | 7 | 5 | 296 | 16 | 330 | 2.51e-16 | 78.6 |
| MS.gene036285.t1 | MTR_1g097890 | 32.161 | 199 | 104 | 5 | 96 | 293 | 38 | 206 | 2.59e-16 | 78.2 |
| MS.gene036285.t1 | MTR_1g097890 | 31.088 | 193 | 114 | 4 | 8 | 200 | 132 | 305 | 4.12e-14 | 72.0 |
| MS.gene036285.t1 | MTR_1g097890 | 27.715 | 267 | 152 | 9 | 10 | 273 | 53 | 281 | 9.07e-13 | 67.8 |
| MS.gene036285.t1 | MTR_5g073040 | 28.094 | 299 | 178 | 12 | 8 | 294 | 39 | 312 | 3.03e-16 | 78.2 |
| MS.gene036285.t1 | MTR_8g092080 | 32.000 | 200 | 105 | 5 | 95 | 293 | 38 | 207 | 8.40e-16 | 76.6 |
| MS.gene036285.t1 | MTR_8g092080 | 27.338 | 278 | 157 | 11 | 3 | 273 | 43 | 282 | 9.10e-13 | 68.2 |
| MS.gene036285.t1 | MTR_8g092080 | 29.064 | 203 | 125 | 4 | 8 | 210 | 133 | 316 | 1.85e-11 | 64.3 |
| MS.gene036285.t1 | MTR_1g088995 | 28.470 | 281 | 179 | 8 | 21 | 297 | 46 | 308 | 3.97e-15 | 74.7 |
| MS.gene036285.t1 | MTR_8g096050 | 25.914 | 301 | 192 | 8 | 5 | 296 | 224 | 502 | 4.45e-15 | 75.5 |
| MS.gene036285.t1 | MTR_4g018750 | 30.165 | 242 | 143 | 10 | 24 | 255 | 31 | 256 | 9.65e-15 | 73.2 |
| MS.gene036285.t1 | MTR_4g018750 | 27.749 | 191 | 125 | 4 | 117 | 296 | 17 | 205 | 1.63e-14 | 72.8 |
| MS.gene036285.t1 | MTR_6g091800 | 25.726 | 241 | 165 | 5 | 5 | 240 | 16 | 247 | 2.24e-14 | 72.0 |
| MS.gene036285.t1 | MTR_4g119770 | 26.070 | 257 | 157 | 7 | 7 | 240 | 13 | 259 | 4.09e-14 | 71.2 |
| MS.gene036285.t1 | MTR_4g119770 | 26.866 | 201 | 130 | 6 | 104 | 290 | 7 | 204 | 2.00e-12 | 66.2 |
| MS.gene036285.t1 | MTR_6g091800 | 25.726 | 241 | 165 | 5 | 5 | 240 | 16 | 247 | 4.27e-14 | 71.2 |
| MS.gene036285.t1 | MTR_3g100570 | 27.536 | 207 | 123 | 5 | 4 | 199 | 120 | 310 | 6.48e-14 | 71.2 |
| MS.gene036285.t1 | MTR_3g100570 | 23.077 | 312 | 201 | 8 | 14 | 296 | 9 | 310 | 1.66e-11 | 64.3 |
| MS.gene036285.t1 | MTR_5g081910 | 24.919 | 309 | 197 | 9 | 20 | 297 | 20 | 324 | 7.86e-14 | 71.2 |
| MS.gene036285.t1 | MTR_7g015870 | 26.298 | 289 | 178 | 11 | 23 | 293 | 40 | 311 | 1.17e-13 | 70.5 |
| MS.gene036285.t1 | MTR_7g064980 | 25.628 | 199 | 135 | 4 | 3 | 200 | 129 | 315 | 1.67e-13 | 70.1 |
| MS.gene036285.t1 | MTR_7g015870 | 26.573 | 286 | 175 | 11 | 23 | 290 | 36 | 304 | 1.94e-13 | 70.1 |
| MS.gene036285.t1 | MTR_6g091800 | 23.256 | 301 | 186 | 7 | 5 | 271 | 16 | 305 | 8.41e-13 | 68.2 |
| MS.gene036285.t1 | MTR_6g092210 | 24.803 | 254 | 178 | 6 | 47 | 296 | 2 | 246 | 1.44e-12 | 66.6 |
| MS.gene036285.t1 | MTR_7g068340 | 26.705 | 176 | 119 | 3 | 121 | 296 | 100 | 265 | 1.57e-12 | 67.8 |
| MS.gene036285.t1 | MTR_7g068340 | 24.373 | 279 | 182 | 9 | 24 | 297 | 103 | 357 | 7.47e-12 | 65.5 |
| MS.gene036285.t1 | MTR_8g068890 | 26.688 | 311 | 193 | 10 | 14 | 296 | 9 | 312 | 2.71e-12 | 66.6 |
| MS.gene036285.t1 | MTR_8g036880 | 26.389 | 288 | 192 | 9 | 2 | 279 | 96 | 373 | 4.06e-12 | 66.6 |
| MS.gene036285.t1 | MTR_2g032610 | 23.311 | 296 | 199 | 9 | 11 | 291 | 32 | 314 | 4.60e-12 | 65.9 |
| MS.gene036285.t1 | MTR_3g028590 | 26.502 | 283 | 187 | 9 | 7 | 279 | 92 | 363 | 7.61e-12 | 65.5 |
| MS.gene036285.t1 | MTR_5g032420 | 23.988 | 321 | 196 | 9 | 14 | 296 | 9 | 319 | 8.84e-12 | 65.1 |
| MS.gene036285.t1 | MTR_3g028590 | 26.502 | 283 | 187 | 9 | 7 | 279 | 96 | 367 | 8.92e-12 | 65.5 |
| MS.gene036285.t1 | MTR_8g086070 | 30.142 | 282 | 154 | 14 | 14 | 279 | 24 | 278 | 1.91e-11 | 63.9 |
| MS.gene036285.t1 | MTR_6g015860 | 24.483 | 290 | 182 | 11 | 23 | 293 | 32 | 303 | 3.32e-11 | 63.5 |
| MS.gene036285.t1 | MTR_6g091800 | 23.970 | 267 | 161 | 6 | 5 | 240 | 16 | 271 | 5.06e-11 | 62.8 |
| MS.gene036285.t1 | MTR_3g074490 | 26.692 | 266 | 162 | 8 | 51 | 296 | 151 | 403 | 5.21e-11 | 63.2 |
| MS.gene036285.t1 | MTR_7g084400 | 27.083 | 192 | 124 | 3 | 106 | 294 | 205 | 383 | 5.47e-11 | 63.2 |
| MS.gene036285.t1 | MTR_4g078545 | 25.939 | 293 | 197 | 10 | 7 | 290 | 74 | 355 | 6.79e-11 | 62.8 |
| MS.gene036285.t1 | MTR_6g091800 | 23.396 | 265 | 165 | 5 | 5 | 240 | 16 | 271 | 8.25e-11 | 62.0 |
| MS.gene036285.t1 | MTR_5g081150 | 28.218 | 202 | 130 | 5 | 3 | 200 | 132 | 322 | 8.52e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036285.t1 | AT5G46800 | 75.667 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 7.18e-170 | 473 |
| MS.gene036285.t1 | AT5G46800 | 75.667 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 7.18e-170 | 473 |
| MS.gene036285.t1 | AT5G46800 | 75.667 | 300 | 70 | 1 | 1 | 297 | 1 | 300 | 7.18e-170 | 473 |
| MS.gene036285.t1 | AT2G33820 | 35.762 | 302 | 174 | 7 | 6 | 297 | 16 | 307 | 6.27e-50 | 167 |
| MS.gene036285.t1 | AT2G33820 | 25.854 | 205 | 138 | 6 | 95 | 293 | 5 | 201 | 2.43e-11 | 63.9 |
| MS.gene036285.t1 | AT2G33820 | 34.839 | 310 | 174 | 8 | 6 | 297 | 16 | 315 | 5.82e-47 | 160 |
| MS.gene036285.t1 | AT1G79900 | 32.967 | 273 | 156 | 6 | 22 | 291 | 30 | 278 | 3.85e-38 | 137 |
| MS.gene036285.t1 | AT2G33820 | 33.600 | 250 | 145 | 7 | 6 | 243 | 16 | 256 | 1.83e-34 | 126 |
| MS.gene036285.t1 | AT2G33820 | 25.481 | 208 | 141 | 6 | 95 | 296 | 5 | 204 | 3.78e-11 | 62.8 |
| MS.gene036285.t1 | AT2G33820 | 35.526 | 228 | 129 | 6 | 80 | 297 | 7 | 226 | 5.18e-33 | 121 |
| MS.gene036285.t1 | AT4G01100 | 28.349 | 321 | 192 | 8 | 3 | 297 | 37 | 345 | 4.26e-28 | 111 |
| MS.gene036285.t1 | AT4G01100 | 28.667 | 300 | 176 | 8 | 24 | 297 | 8 | 295 | 9.23e-27 | 107 |
| MS.gene036285.t1 | AT4G01100 | 27.164 | 335 | 192 | 8 | 3 | 297 | 37 | 359 | 1.25e-26 | 107 |
| MS.gene036285.t1 | AT5G48970 | 27.692 | 325 | 189 | 9 | 7 | 296 | 21 | 334 | 1.84e-26 | 106 |
| MS.gene036285.t1 | AT1G25380 | 29.197 | 274 | 179 | 8 | 24 | 291 | 37 | 301 | 8.64e-25 | 102 |
| MS.gene036285.t1 | AT1G25380 | 29.197 | 274 | 179 | 8 | 24 | 291 | 37 | 301 | 8.64e-25 | 102 |
| MS.gene036285.t1 | AT5G58970 | 32.270 | 282 | 167 | 10 | 24 | 296 | 32 | 298 | 2.30e-24 | 100 |
| MS.gene036285.t1 | AT5G58970 | 28.358 | 201 | 127 | 5 | 1 | 198 | 111 | 297 | 2.26e-16 | 78.2 |
| MS.gene036285.t1 | AT5G58970 | 26.471 | 204 | 142 | 4 | 98 | 296 | 6 | 206 | 8.69e-15 | 73.6 |
| MS.gene036285.t1 | AT3G54110 | 31.900 | 279 | 166 | 10 | 24 | 293 | 31 | 294 | 4.96e-23 | 96.7 |
| MS.gene036285.t1 | AT3G54110 | 27.861 | 201 | 131 | 3 | 1 | 199 | 109 | 297 | 1.66e-16 | 78.6 |
| MS.gene036285.t1 | AT3G54110 | 29.500 | 200 | 132 | 4 | 102 | 296 | 9 | 204 | 8.35e-16 | 76.6 |
| MS.gene036285.t1 | AT3G21390 | 26.101 | 318 | 192 | 6 | 7 | 291 | 18 | 325 | 7.46e-23 | 96.7 |
| MS.gene036285.t1 | AT3G21390 | 26.101 | 318 | 192 | 6 | 7 | 291 | 40 | 347 | 9.82e-23 | 96.7 |
| MS.gene036285.t1 | AT4G11440 | 27.273 | 297 | 183 | 8 | 10 | 297 | 332 | 604 | 1.62e-22 | 97.8 |
| MS.gene036285.t1 | AT4G11440 | 27.273 | 297 | 183 | 8 | 10 | 297 | 332 | 604 | 1.62e-22 | 97.8 |
| MS.gene036285.t1 | AT2G47490 | 27.437 | 277 | 188 | 7 | 24 | 296 | 33 | 300 | 1.05e-21 | 93.2 |
| MS.gene036285.t1 | AT5G66380 | 26.421 | 299 | 194 | 9 | 6 | 290 | 8 | 294 | 1.68e-21 | 92.8 |
| MS.gene036285.t1 | AT5G66380 | 25.943 | 212 | 138 | 7 | 5 | 207 | 107 | 308 | 2.47e-14 | 72.4 |
| MS.gene036285.t1 | AT1G14140 | 26.087 | 276 | 194 | 6 | 21 | 293 | 29 | 297 | 8.33e-21 | 90.5 |
| MS.gene036285.t1 | AT1G14140 | 34.239 | 184 | 105 | 7 | 117 | 293 | 28 | 202 | 9.66e-15 | 73.6 |
| MS.gene036285.t1 | AT5G01340 | 29.617 | 287 | 176 | 10 | 10 | 286 | 19 | 289 | 2.42e-20 | 89.4 |
| MS.gene036285.t1 | AT5G01340 | 31.250 | 176 | 111 | 5 | 19 | 191 | 123 | 291 | 4.23e-16 | 77.4 |
| MS.gene036285.t1 | AT5G48970 | 26.007 | 273 | 165 | 7 | 50 | 296 | 2 | 263 | 7.55e-19 | 84.7 |
| MS.gene036285.t1 | AT1G74240 | 28.391 | 317 | 191 | 11 | 4 | 296 | 32 | 336 | 8.28e-19 | 85.9 |
| MS.gene036285.t1 | AT1G07030 | 28.620 | 297 | 180 | 10 | 8 | 294 | 40 | 314 | 1.06e-18 | 85.1 |
| MS.gene036285.t1 | AT2G37890 | 26.645 | 304 | 196 | 6 | 6 | 296 | 43 | 332 | 1.28e-18 | 85.1 |
| MS.gene036285.t1 | AT2G37890 | 27.941 | 204 | 134 | 5 | 2 | 204 | 146 | 337 | 4.07e-14 | 72.0 |
| MS.gene036285.t1 | AT5G61810 | 27.333 | 300 | 181 | 9 | 5 | 296 | 62 | 332 | 1.54e-18 | 84.7 |
| MS.gene036285.t1 | AT1G14560 | 26.531 | 294 | 179 | 9 | 24 | 296 | 43 | 320 | 1.63e-18 | 84.7 |
| MS.gene036285.t1 | AT4G32400 | 26.087 | 299 | 188 | 7 | 6 | 296 | 112 | 385 | 1.67e-18 | 85.1 |
| MS.gene036285.t1 | AT1G74240 | 28.188 | 298 | 178 | 10 | 23 | 296 | 3 | 288 | 5.76e-18 | 82.8 |
| MS.gene036285.t1 | AT5G61810 | 27.517 | 298 | 183 | 9 | 5 | 296 | 205 | 475 | 9.31e-18 | 83.6 |
| MS.gene036285.t1 | AT5G42130 | 28.520 | 277 | 171 | 5 | 24 | 293 | 134 | 390 | 2.47e-17 | 82.0 |
| MS.gene036285.t1 | AT1G34065 | 33.000 | 200 | 115 | 5 | 8 | 207 | 156 | 336 | 5.95e-17 | 80.5 |
| MS.gene036285.t1 | AT1G34065 | 31.443 | 194 | 97 | 5 | 103 | 293 | 70 | 230 | 2.19e-13 | 70.1 |
| MS.gene036285.t1 | AT1G34065 | 27.444 | 266 | 149 | 11 | 14 | 273 | 78 | 305 | 1.83e-11 | 64.3 |
| MS.gene036285.t1 | AT1G34065 | 33.000 | 200 | 115 | 5 | 8 | 207 | 163 | 343 | 7.51e-17 | 80.1 |
| MS.gene036285.t1 | AT1G34065 | 31.443 | 194 | 97 | 5 | 103 | 293 | 77 | 237 | 2.21e-13 | 70.1 |
| MS.gene036285.t1 | AT1G34065 | 27.444 | 266 | 149 | 11 | 14 | 273 | 85 | 312 | 2.25e-11 | 63.9 |
| MS.gene036285.t1 | AT2G30160 | 26.667 | 300 | 185 | 10 | 8 | 294 | 42 | 319 | 1.10e-16 | 79.3 |
| MS.gene036285.t1 | AT5G51050 | 26.962 | 293 | 190 | 7 | 8 | 296 | 223 | 495 | 4.22e-16 | 78.6 |
| MS.gene036285.t1 | AT3G55640 | 24.918 | 305 | 194 | 8 | 3 | 290 | 33 | 319 | 1.17e-15 | 76.6 |
| MS.gene036285.t1 | AT3G55640 | 27.749 | 191 | 125 | 6 | 7 | 196 | 144 | 322 | 3.08e-13 | 69.3 |
| MS.gene036285.t1 | AT3G55640 | 28.866 | 194 | 126 | 5 | 107 | 294 | 37 | 224 | 2.14e-11 | 63.9 |
| MS.gene036285.t1 | AT3G55640 | 24.918 | 305 | 194 | 8 | 3 | 290 | 33 | 319 | 1.17e-15 | 76.6 |
| MS.gene036285.t1 | AT3G55640 | 27.749 | 191 | 125 | 6 | 7 | 196 | 144 | 322 | 3.08e-13 | 69.3 |
| MS.gene036285.t1 | AT3G55640 | 28.866 | 194 | 126 | 5 | 107 | 294 | 37 | 224 | 2.14e-11 | 63.9 |
| MS.gene036285.t1 | AT4G26180 | 25.325 | 308 | 198 | 10 | 5 | 296 | 18 | 309 | 1.50e-15 | 76.3 |
| MS.gene036285.t1 | AT1G14560 | 26.394 | 269 | 161 | 9 | 24 | 271 | 43 | 295 | 4.46e-15 | 74.7 |
| MS.gene036285.t1 | AT5G58970 | 26.471 | 204 | 142 | 4 | 98 | 296 | 6 | 206 | 5.04e-15 | 73.9 |
| MS.gene036285.t1 | AT5G58970 | 31.963 | 219 | 131 | 8 | 24 | 234 | 32 | 240 | 2.88e-14 | 72.0 |
| MS.gene036285.t1 | AT3G53940 | 27.723 | 202 | 127 | 7 | 3 | 200 | 175 | 361 | 1.43e-14 | 73.6 |
| MS.gene036285.t1 | AT3G53940 | 25.490 | 306 | 197 | 9 | 6 | 296 | 71 | 360 | 3.77e-14 | 72.4 |
| MS.gene036285.t1 | AT5G07320 | 25.180 | 278 | 179 | 8 | 24 | 297 | 225 | 477 | 2.71e-14 | 73.2 |
| MS.gene036285.t1 | AT4G24570 | 27.987 | 318 | 178 | 13 | 14 | 296 | 9 | 310 | 4.09e-14 | 72.0 |
| MS.gene036285.t1 | AT4G24570 | 25.123 | 203 | 129 | 4 | 3 | 199 | 125 | 310 | 3.79e-11 | 63.2 |
| MS.gene036285.t1 | AT4G39460 | 29.329 | 283 | 145 | 11 | 3 | 273 | 49 | 288 | 4.79e-14 | 71.6 |
| MS.gene036285.t1 | AT4G39460 | 31.383 | 188 | 99 | 4 | 103 | 290 | 53 | 210 | 7.08e-14 | 71.2 |
| MS.gene036285.t1 | AT4G39460 | 29.016 | 193 | 118 | 4 | 8 | 200 | 139 | 312 | 3.45e-11 | 63.5 |
| MS.gene036285.t1 | AT4G39460 | 29.329 | 283 | 145 | 11 | 3 | 273 | 49 | 288 | 4.79e-14 | 71.6 |
| MS.gene036285.t1 | AT4G39460 | 31.383 | 188 | 99 | 4 | 103 | 290 | 53 | 210 | 7.08e-14 | 71.2 |
| MS.gene036285.t1 | AT4G39460 | 29.016 | 193 | 118 | 4 | 8 | 200 | 139 | 312 | 3.45e-11 | 63.5 |
| MS.gene036285.t1 | AT4G39460 | 29.329 | 283 | 145 | 11 | 3 | 273 | 49 | 288 | 4.79e-14 | 71.6 |
| MS.gene036285.t1 | AT4G39460 | 31.383 | 188 | 99 | 4 | 103 | 290 | 53 | 210 | 7.08e-14 | 71.2 |
| MS.gene036285.t1 | AT4G39460 | 29.016 | 193 | 118 | 4 | 8 | 200 | 139 | 312 | 3.45e-11 | 63.5 |
| MS.gene036285.t1 | AT5G15640 | 23.611 | 288 | 189 | 9 | 23 | 293 | 36 | 309 | 3.10e-13 | 69.3 |
| MS.gene036285.t1 | AT5G13490 | 27.178 | 287 | 189 | 9 | 3 | 279 | 83 | 359 | 3.29e-13 | 69.7 |
| MS.gene036285.t1 | AT5G13490 | 27.178 | 287 | 189 | 9 | 3 | 279 | 83 | 359 | 3.29e-13 | 69.7 |
| MS.gene036285.t1 | AT5G15640 | 23.611 | 288 | 189 | 9 | 23 | 293 | 43 | 316 | 3.35e-13 | 69.3 |
| MS.gene036285.t1 | AT5G64970 | 27.407 | 270 | 157 | 8 | 50 | 296 | 45 | 298 | 3.69e-13 | 68.9 |
| MS.gene036285.t1 | AT5G56450 | 24.351 | 308 | 204 | 12 | 6 | 297 | 32 | 326 | 4.03e-13 | 69.3 |
| MS.gene036285.t1 | AT5G64970 | 27.675 | 271 | 155 | 9 | 50 | 296 | 169 | 422 | 6.15e-13 | 68.9 |
| MS.gene036285.t1 | AT1G14560 | 27.317 | 205 | 126 | 5 | 108 | 296 | 25 | 222 | 8.46e-13 | 67.0 |
| MS.gene036285.t1 | AT4G26180 | 25.442 | 283 | 179 | 10 | 5 | 271 | 18 | 284 | 9.11e-13 | 67.8 |
| MS.gene036285.t1 | AT2G39970 | 25.902 | 305 | 183 | 13 | 20 | 290 | 20 | 315 | 1.20e-12 | 67.8 |
| MS.gene036285.t1 | AT5G01500 | 24.820 | 278 | 188 | 7 | 21 | 297 | 132 | 389 | 2.32e-12 | 67.4 |
| MS.gene036285.t1 | AT3G51870 | 24.199 | 281 | 186 | 9 | 21 | 297 | 104 | 361 | 2.97e-12 | 67.0 |
| MS.gene036285.t1 | AT3G55640 | 28.866 | 194 | 126 | 5 | 107 | 294 | 37 | 224 | 1.37e-11 | 63.9 |
| MS.gene036285.t1 | AT3G55640 | 28.866 | 194 | 126 | 5 | 107 | 294 | 37 | 224 | 1.37e-11 | 63.9 |
| MS.gene036285.t1 | AT2G22500 | 27.461 | 193 | 104 | 7 | 21 | 198 | 136 | 307 | 1.42e-11 | 64.3 |
| MS.gene036285.t1 | AT3G08580 | 25.784 | 287 | 193 | 9 | 3 | 279 | 79 | 355 | 3.71e-11 | 63.5 |
| MS.gene036285.t1 | AT3G08580 | 25.784 | 287 | 193 | 9 | 3 | 279 | 79 | 355 | 3.71e-11 | 63.5 |
| MS.gene036285.t1 | AT5G17400 | 23.755 | 261 | 188 | 7 | 24 | 279 | 30 | 284 | 4.10e-11 | 63.2 |
| MS.gene036285.t1 | AT5G09470 | 27.320 | 194 | 127 | 4 | 8 | 199 | 151 | 332 | 8.20e-11 | 62.4 |
Find 89 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTGAACCAGAAAATTT+TGG | 0.149353 | 5.1:+20725118 | None:intergenic |
| GCTTTGGAGCTTGACCTTTA+TGG | 0.202406 | 5.1:+20726583 | None:intergenic |
| TGCTAATGCAGCATGTTTCT+TGG | 0.245533 | 5.1:-20725014 | MS.gene036285:CDS |
| CCAAACATTGCGGCATTTCC+TGG | 0.281273 | 5.1:+20725307 | None:intergenic |
| AGAGGTTCTCTGATGCTTTC+CGG | 0.300203 | 5.1:-20725226 | MS.gene036285:CDS |
| AAAGGTCTTTATAAGGGTTT+TGG | 0.303125 | 5.1:-20725061 | MS.gene036285:CDS |
| AAATCAGAAGGTGGCGTAAA+AGG | 0.329776 | 5.1:-20725370 | MS.gene036285:CDS |
| AAAGCTACTGAAGGGTTTAA+AGG | 0.332217 | 5.1:-20725079 | MS.gene036285:CDS |
| AGGGTTTAAAGGTCTTTATA+AGG | 0.342100 | 5.1:-20725068 | MS.gene036285:CDS |
| TCAATTGCACCGGAATATTT+CGG | 0.343305 | 5.1:+20726533 | None:intergenic |
| GACCTTACTGCTGGAACTAT+TGG | 0.348951 | 5.1:-20726644 | MS.gene036285:CDS |
| ATGCTTTCCGGAGGCTTGGC+CGG | 0.370628 | 5.1:-20725214 | MS.gene036285:CDS |
| GCAACATTGGCAGTGAAATA+TGG | 0.370723 | 5.1:-20725424 | MS.gene036285:CDS |
| CCAGGAAATGCCGCAATGTT+TGG | 0.371721 | 5.1:-20725307 | MS.gene036285:CDS |
| GAAGTGGTGTAGGCTGGCTT+TGG | 0.378224 | 5.1:+20726567 | None:intergenic |
| GCTGTACTGTTTACAGTTAG+AGG | 0.402222 | 5.1:-20726422 | MS.gene036285:CDS |
| TTCAGTAGGGCAAGCTAGAA+AGG | 0.416209 | 5.1:+20726307 | None:intergenic |
| TCTGATGCTTTCCGGAGGCT+TGG | 0.423725 | 5.1:-20725218 | MS.gene036285:CDS |
| GCCTACACCACTTCCTGGTC+AGG | 0.425760 | 5.1:-20726558 | MS.gene036285:CDS |
| GTTGTTTGTGGAGCTGCTGC+CGG | 0.429328 | 5.1:-20726341 | MS.gene036285:CDS |
| GGGTTTAAAGGTCTTTATAA+GGG | 0.432443 | 5.1:-20725067 | MS.gene036285:CDS |
| AGCAGCTCCGGCCAAGCCTC+CGG | 0.432701 | 5.1:+20725207 | None:intergenic |
| GGTCAGGTTCCGAAATATTC+CGG | 0.433881 | 5.1:-20726542 | MS.gene036285:CDS |
| GGAACACTTCTGCACATTGC+AGG | 0.434706 | 5.1:+20725037 | None:intergenic |
| GGAACAAAGCAATTAATTGC+AGG | 0.436778 | 5.1:-20725274 | MS.gene036285:CDS |
| GTTTACAGTTAGAGGGCAAA+TGG | 0.437068 | 5.1:-20726414 | MS.gene036285:CDS |
| GAGATGACAAGATCAGCTTT+AGG | 0.446594 | 5.1:-20724986 | MS.gene036285:CDS |
| TGTAAACAGTACAGCATTGA+AGG | 0.447430 | 5.1:+20726430 | None:intergenic |
| TTAAATCAGCAGGTTGTTTG+TGG | 0.448036 | 5.1:-20726353 | MS.gene036285:CDS |
| TCATCCATTTGACACCATAA+AGG | 0.457483 | 5.1:-20726597 | MS.gene036285:CDS |
| TGGTATTTCACGCGCCATAG+TGG | 0.462161 | 5.1:+20725327 | None:intergenic |
| GGTATTTCACGCGCCATAGT+GGG | 0.464109 | 5.1:+20725328 | None:intergenic |
| CAAGGGGTTAGTCCCCACTA+TGG | 0.464944 | 5.1:-20725341 | MS.gene036285:CDS |
| TAGAAAGGAAACAGAAAGTC+CGG | 0.466630 | 5.1:+20726322 | None:intergenic |
| AAGAAACATGCTGCATTAGC+AGG | 0.473527 | 5.1:+20725016 | None:intergenic |
| AGCCAGCCTACACCACTTCC+TGG | 0.475356 | 5.1:-20726563 | MS.gene036285:CDS |
| CTCCAATAGTTCCAGCAGTA+AGG | 0.497657 | 5.1:+20726642 | None:intergenic |
| TGTTCTCACATTAAATCAGC+AGG | 0.508525 | 5.1:-20726363 | MS.gene036285:CDS |
| GACCAGGAAGTGGTGTAGGC+TGG | 0.508905 | 5.1:+20726561 | None:intergenic |
| TTGACCTTTATGGTGTCAAA+TGG | 0.512260 | 5.1:+20726593 | None:intergenic |
| CAGAGTGCACTAGCTGGATC+AGG | 0.515504 | 5.1:-20725451 | MS.gene036285:CDS |
| GGCGGATTATACAAAGGCAT+GGG | 0.519193 | 5.1:-20726476 | MS.gene036285:CDS |
| CTGCATTTGATAAGTTCAGT+AGG | 0.523172 | 5.1:+20726293 | None:intergenic |
| CTACTGAACTTATCAAATGC+AGG | 0.524614 | 5.1:-20726292 | MS.gene036285:intron |
| ACAATAGCAGCTGAAGGTCC+TGG | 0.526382 | 5.1:-20726497 | MS.gene036285:CDS |
| AGAAGGATAAAAGCTACTGA+AGG | 0.529939 | 5.1:-20725088 | MS.gene036285:CDS |
| GAATATTTCGGAACCTGACC+AGG | 0.532901 | 5.1:+20726545 | None:intergenic |
| GTGGCTAAGGACCTTACTGC+TGG | 0.535312 | 5.1:-20726653 | MS.gene036285:CDS |
| CAAGCACAGAGTGCACTAGC+TGG | 0.538223 | 5.1:-20725457 | MS.gene036285:CDS |
| ATGCCTTTGTATAATCCGCC+AGG | 0.538814 | 5.1:+20726479 | None:intergenic |
| CTTACTGCTGGAACTATTGG+AGG | 0.538872 | 5.1:-20726641 | MS.gene036285:CDS |
| TCAGATGGGAGACGTGGCTA+AGG | 0.549312 | 5.1:-20726666 | None:intergenic |
| GGGGCAGCACAACTGATAGT+TGG | 0.550601 | 5.1:-20726620 | MS.gene036285:CDS |
| CTTGACAGCATCAATTGCAC+CGG | 0.554392 | 5.1:+20726523 | None:intergenic |
| ACACTCTTAACAACATCAGT+TGG | 0.554556 | 5.1:+20725166 | None:intergenic |
| TGGATCAGGAACAGCAACAT+TGG | 0.556451 | 5.1:-20725437 | MS.gene036285:CDS |
| TTCGGAACCTGACCAGGAAG+TGG | 0.558819 | 5.1:+20726551 | None:intergenic |
| CTGTACTGTTTACAGTTAGA+GGG | 0.562986 | 5.1:-20726421 | MS.gene036285:CDS |
| GTTCAATTGATGCTTTCAGA+AGG | 0.566746 | 5.1:-20725105 | MS.gene036285:CDS |
| GATACCTCTGAACTCGGTAG+AGG | 0.574095 | 5.1:-20725244 | MS.gene036285:CDS |
| ACATGTCTAGCTACATCCAT+TGG | 0.577581 | 5.1:+20725397 | None:intergenic |
| TGGCGGATTATACAAAGGCA+TGG | 0.580765 | 5.1:-20726477 | MS.gene036285:CDS |
| TGCATTTGATAAGTTCAGTA+GGG | 0.581238 | 5.1:+20726294 | None:intergenic |
| GAAGGATAAAAGCTACTGAA+GGG | 0.583076 | 5.1:-20725087 | MS.gene036285:CDS |
| GTATTTCACGCGCCATAGTG+GGG | 0.589667 | 5.1:+20725329 | None:intergenic |
| GCATTGTTGAGGTCACATCC+TGG | 0.596335 | 5.1:-20726389 | MS.gene036285:CDS |
| TTACTGCTGGAACTATTGGA+GGG | 0.599716 | 5.1:-20726640 | MS.gene036285:CDS |
| TCTACCGAGTTCAGAGGTAT+CGG | 0.601498 | 5.1:+20725246 | None:intergenic |
| TTCATATACACCAAACATTG+CGG | 0.609192 | 5.1:+20725297 | None:intergenic |
| AGACATGTTCTCAAATCAGA+AGG | 0.610664 | 5.1:-20725382 | MS.gene036285:CDS |
| ACTATGGCGCGTGAAATACC+AGG | 0.621588 | 5.1:-20725325 | MS.gene036285:CDS |
| GCAATGTTTGGTGTATATGA+AGG | 0.623204 | 5.1:-20725295 | MS.gene036285:CDS |
| GGCAAATGGAAGCATTGTTG+AGG | 0.625965 | 5.1:-20726400 | MS.gene036285:CDS |
| AAGAAGACAATAGCAGCTGA+AGG | 0.629491 | 5.1:-20726503 | MS.gene036285:CDS |
| TACTGCTGGAACTATTGGAG+GGG | 0.632313 | 5.1:-20726639 | MS.gene036285:CDS |
| ACCTGACCAGGAAGTGGTGT+AGG | 0.636499 | 5.1:+20726557 | None:intergenic |
| AGAACCTCTACCGAGTTCAG+AGG | 0.650113 | 5.1:+20725240 | None:intergenic |
| AGTGAAATATGGTGGACCAA+TGG | 0.651838 | 5.1:-20725413 | MS.gene036285:CDS |
| AAGGCAGCTACCGTAGCAAG+TGG | 0.654157 | 5.1:+20726449 | None:intergenic |
| ACATTGGCAGTGAAATATGG+TGG | 0.655537 | 5.1:-20725421 | MS.gene036285:CDS |
| CATGTTCTCAAATCAGAAGG+TGG | 0.655831 | 5.1:-20725379 | MS.gene036285:CDS |
| GGCACCGATACCTCTGAACT+CGG | 0.657541 | 5.1:-20725250 | MS.gene036285:CDS |
| ACAAAGCAATTAATTGCAGG+AGG | 0.657726 | 5.1:-20725271 | MS.gene036285:CDS |
| GCGGATTATACAAAGGCATG+GGG | 0.657776 | 5.1:-20726475 | MS.gene036285:CDS |
| TTTAATGTGAGAACATCACC+AGG | 0.660693 | 5.1:+20726371 | None:intergenic |
| GGTTCTCTGATGCTTTCCGG+AGG | 0.681688 | 5.1:-20725223 | MS.gene036285:CDS |
| GGTCCTGGCGGATTATACAA+AGG | 0.688373 | 5.1:-20726482 | MS.gene036285:CDS |
| CGGATTATACAAAGGCATGG+GGG | 0.689051 | 5.1:-20726474 | MS.gene036285:CDS |
| ATAGCAGCTGAAGGTCCTGG+CGG | 0.735146 | 5.1:-20726494 | MS.gene036285:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGACTATATATATCTGTT+GGG | + | chr5.1:20725845-20725864 | None:intergenic | 20.0% |
| !!! | CTTTTATTAATTTTGAACCA+GGG | + | chr5.1:20725641-20725660 | None:intergenic | 20.0% |
| !!! | TACAAAAATCCAAAATTTTC+TGG | - | chr5.1:20726517-20726536 | MS.gene036285:CDS | 20.0% |
| !!! | TCTTTTATTAATTTTGAACC+AGG | + | chr5.1:20725642-20725661 | None:intergenic | 20.0% |
| !!! | TTTTGACTATATATATCTGT+TGG | + | chr5.1:20725846-20725865 | None:intergenic | 20.0% |
| ! | AAATGTAATCATTTCTCTCA+TGG | - | chr5.1:20725994-20726013 | MS.gene036285:intron | 25.0% |
| ! | ATCTAAATCATAGACAAATG+CGG | + | chr5.1:20725556-20725575 | None:intergenic | 25.0% |
| ! | TAACAGAGAACAATAAACAA+AGG | + | chr5.1:20725512-20725531 | None:intergenic | 25.0% |
| ! | TGTTCTAACAATATCTCTAT+GGG | + | chr5.1:20725614-20725633 | None:intergenic | 25.0% |
| !! | TCAATTGAACCAGAAAATTT+TGG | + | chr5.1:20726529-20726548 | None:intergenic | 25.0% |
| AATAGTCTTTACTCTTCACA+AGG | - | chr5.1:20725864-20725883 | MS.gene036285:intron | 30.0% | |
| AATCTCTGATTCATCTCTTT+AGG | - | chr5.1:20725957-20725976 | MS.gene036285:intron | 30.0% | |
| ACTTTCTATTGTTCAAGCTT+AGG | - | chr5.1:20725741-20725760 | MS.gene036285:intron | 30.0% | |
| AGGGTTTAAAGGTCTTTATA+AGG | - | chr5.1:20726576-20726595 | MS.gene036285:CDS | 30.0% | |
| ATCTCTGATTCATCTCTTTA+GGG | - | chr5.1:20725958-20725977 | MS.gene036285:intron | 30.0% | |
| CTATATATATCTGTTGGGTA+TGG | + | chr5.1:20725840-20725859 | None:intergenic | 30.0% | |
| CTGTTCTAACAATATCTCTA+TGG | + | chr5.1:20725615-20725634 | None:intergenic | 30.0% | |
| CTTTCTATTGTTCAAGCTTA+GGG | - | chr5.1:20725742-20725761 | MS.gene036285:intron | 30.0% | |
| GAAAATTAAAACACCATCGT+TGG | + | chr5.1:20725388-20725407 | None:intergenic | 30.0% | |
| GGGTTTAAAGGTCTTTATAA+GGG | - | chr5.1:20726577-20726596 | MS.gene036285:CDS | 30.0% | |
| TGCATTTGATAAGTTCAGTA+GGG | + | chr5.1:20725353-20725372 | None:intergenic | 30.0% | |
| TTCATATACACCAAACATTG+CGG | + | chr5.1:20726350-20726369 | None:intergenic | 30.0% | |
| ! | AAAGGTCTTTATAAGGGTTT+TGG | - | chr5.1:20726583-20726602 | MS.gene036285:CDS | 30.0% |
| ! | GATTACTAGAATCTGAGATT+AGG | + | chr5.1:20725941-20725960 | None:intergenic | 30.0% |
| ! | GCTCATAATTTACTGATTAG+TGG | + | chr5.1:20725818-20725837 | None:intergenic | 30.0% |
| ! | TTATTAATTTTGAACCAGGG+TGG | + | chr5.1:20725638-20725657 | None:intergenic | 30.0% |
| AAAGCTACTGAAGGGTTTAA+AGG | - | chr5.1:20726565-20726584 | MS.gene036285:CDS | 35.0% | |
| AAATCATAGACAAATGCGGA+TGG | + | chr5.1:20725552-20725571 | None:intergenic | 35.0% | |
| AATTAAAACACCATCGTTGG+TGG | + | chr5.1:20725385-20725404 | None:intergenic | 35.0% | |
| ACAAAGCAATTAATTGCAGG+AGG | - | chr5.1:20726373-20726392 | MS.gene036285:CDS | 35.0% | |
| ACACTCTTAACAACATCAGT+TGG | + | chr5.1:20726481-20726500 | None:intergenic | 35.0% | |
| AGAAGGATAAAAGCTACTGA+AGG | - | chr5.1:20726556-20726575 | MS.gene036285:CDS | 35.0% | |
| AGACATGTTCTCAAATCAGA+AGG | - | chr5.1:20726262-20726281 | MS.gene036285:intron | 35.0% | |
| ATCATTTCTCTCATGGTTGA+TGG | - | chr5.1:20726001-20726020 | MS.gene036285:intron | 35.0% | |
| CTACTGAACTTATCAAATGC+AGG | - | chr5.1:20725352-20725371 | MS.gene036285:CDS | 35.0% | |
| CTAGAAAGTTATTGCATGAC+AGG | + | chr5.1:20725479-20725498 | None:intergenic | 35.0% | |
| CTGCATTTGATAAGTTCAGT+AGG | + | chr5.1:20725354-20725373 | None:intergenic | 35.0% | |
| CTGTACTGTTTACAGTTAGA+GGG | - | chr5.1:20725223-20725242 | MS.gene036285:CDS | 35.0% | |
| GAAGGATAAAAGCTACTGAA+GGG | - | chr5.1:20726557-20726576 | MS.gene036285:CDS | 35.0% | |
| GGAACAAAGCAATTAATTGC+AGG | - | chr5.1:20726370-20726389 | MS.gene036285:CDS | 35.0% | |
| GTTCAATTGATGCTTTCAGA+AGG | - | chr5.1:20726539-20726558 | MS.gene036285:CDS | 35.0% | |
| TAGAAAGGAAACAGAAAGTC+CGG | + | chr5.1:20725325-20725344 | None:intergenic | 35.0% | |
| TCAATTGCACCGGAATATTT+CGG | + | chr5.1:20725114-20725133 | None:intergenic | 35.0% | |
| TCATCCATTTGACACCATAA+AGG | - | chr5.1:20725047-20725066 | MS.gene036285:CDS | 35.0% | |
| TCTCTGATTCATCTCTTTAG+GGG | - | chr5.1:20725959-20725978 | MS.gene036285:intron | 35.0% | |
| TGTTCTCACATTAAATCAGC+AGG | - | chr5.1:20725281-20725300 | MS.gene036285:CDS | 35.0% | |
| TTAAATCAGCAGGTTGTTTG+TGG | - | chr5.1:20725291-20725310 | MS.gene036285:CDS | 35.0% | |
| TTTAATGTGAGAACATCACC+AGG | + | chr5.1:20725276-20725295 | None:intergenic | 35.0% | |
| ! | CAATAAACAAAGGTTTGCTC+TGG | + | chr5.1:20725502-20725521 | None:intergenic | 35.0% |
| ! | TGTAAACAGTACAGCATTGA+AGG | + | chr5.1:20725217-20725236 | None:intergenic | 35.0% |
| ! | TTGACCTTTATGGTGTCAAA+TGG | + | chr5.1:20725054-20725073 | None:intergenic | 35.0% |
| !! | GCAATGTTTGGTGTATATGA+AGG | - | chr5.1:20726349-20726368 | MS.gene036285:CDS | 35.0% |
| AAATCAGAAGGTGGCGTAAA+AGG | - | chr5.1:20726274-20726293 | MS.gene036285:intron | 40.0% | |
| AAGAAACATGCTGCATTAGC+AGG | + | chr5.1:20726631-20726650 | None:intergenic | 40.0% | |
| AAGAAGACAATAGCAGCTGA+AGG | - | chr5.1:20725141-20725160 | MS.gene036285:CDS | 40.0% | |
| AATAGCTAGTTCAAGTGGCT+AGG | + | chr5.1:20725900-20725919 | None:intergenic | 40.0% | |
| ACATGTCTAGCTACATCCAT+TGG | + | chr5.1:20726250-20726269 | None:intergenic | 40.0% | |
| ACATTGGCAGTGAAATATGG+TGG | - | chr5.1:20726223-20726242 | MS.gene036285:intron | 40.0% | |
| CACTTGAACTAGCTATTGGA+CGG | - | chr5.1:20725903-20725922 | MS.gene036285:intron | 40.0% | |
| CATAAACCAAAAAGCAGCTC+CGG | + | chr5.1:20726452-20726471 | None:intergenic | 40.0% | |
| CATGTTCTCAAATCAGAAGG+TGG | - | chr5.1:20726265-20726284 | MS.gene036285:intron | 40.0% | |
| GAGATGACAAGATCAGCTTT+AGG | - | chr5.1:20726658-20726677 | MS.gene036285:CDS | 40.0% | |
| GCAACATTGGCAGTGAAATA+TGG | - | chr5.1:20726220-20726239 | MS.gene036285:intron | 40.0% | |
| GCAAGTCAGAGTTATTCTCA+TGG | + | chr5.1:20726046-20726065 | None:intergenic | 40.0% | |
| GCTGTACTGTTTACAGTTAG+AGG | - | chr5.1:20725222-20725241 | MS.gene036285:CDS | 40.0% | |
| GGTTTACAAAGCACAACTTG+TGG | - | chr5.1:20725763-20725782 | MS.gene036285:intron | 40.0% | |
| GTTTACAGTTAGAGGGCAAA+TGG | - | chr5.1:20725230-20725249 | MS.gene036285:CDS | 40.0% | |
| TAGCCACTTGAACTAGCTAT+TGG | - | chr5.1:20725899-20725918 | MS.gene036285:intron | 40.0% | |
| TGCTAATGCAGCATGTTTCT+TGG | - | chr5.1:20726630-20726649 | MS.gene036285:CDS | 40.0% | |
| TGGTTAACTACTCATCCACA+CGG | - | chr5.1:20725783-20725802 | MS.gene036285:intron | 40.0% | |
| TTACTGCTGGAACTATTGGA+GGG | - | chr5.1:20725004-20725023 | MS.gene036285:CDS | 40.0% | |
| TTTGTTGCACGATGAATACC+AGG | - | chr5.1:20726161-20726180 | MS.gene036285:intron | 40.0% | |
| ! | GGCGTAAAAGGTCTTTTCAA+GGG | - | chr5.1:20726286-20726305 | MS.gene036285:intron | 40.0% |
| ! | GTCTAAGACGTATGCATGAT+TGG | + | chr5.1:20725714-20725733 | None:intergenic | 40.0% |
| ! | TGGCGTAAAAGGTCTTTTCA+AGG | - | chr5.1:20726285-20726304 | MS.gene036285:intron | 40.0% |
| !! | AGTGAAATATGGTGGACCAA+TGG | - | chr5.1:20726231-20726250 | MS.gene036285:intron | 40.0% |
| !! | CTCTTTAGGGGCTCATTTTA+AGG | - | chr5.1:20725971-20725990 | MS.gene036285:intron | 40.0% |
| !! | GCGTAAAAGGTCTTTTCAAG+GGG | - | chr5.1:20726287-20726306 | MS.gene036285:intron | 40.0% |
| AGAGGTTCTCTGATGCTTTC+CGG | - | chr5.1:20726418-20726437 | MS.gene036285:CDS | 45.0% | |
| ATGCCTTTGTATAATCCGCC+AGG | + | chr5.1:20725168-20725187 | None:intergenic | 45.0% | |
| CATGCATACGTCTTAGACTG+CGG | - | chr5.1:20725716-20725735 | MS.gene036285:intron | 45.0% | |
| CGTCCAATAGCTAGTTCAAG+TGG | + | chr5.1:20725905-20725924 | None:intergenic | 45.0% | |
| CTATTGGACGGAGTAGAGTT+AGG | - | chr5.1:20725915-20725934 | MS.gene036285:intron | 45.0% | |
| CTCCAATAGTTCCAGCAGTA+AGG | + | chr5.1:20725005-20725024 | None:intergenic | 45.0% | |
| CTTACTGCTGGAACTATTGG+AGG | - | chr5.1:20725003-20725022 | MS.gene036285:CDS | 45.0% | |
| CTTGACAGCATCAATTGCAC+CGG | + | chr5.1:20725124-20725143 | None:intergenic | 45.0% | |
| GAATATTTCGGAACCTGACC+AGG | + | chr5.1:20725102-20725121 | None:intergenic | 45.0% | |
| GACCTTACTGCTGGAACTAT+TGG | - | chr5.1:20725000-20725019 | MS.gene036285:CDS | 45.0% | |
| GGTCAGGTTCCGAAATATTC+CGG | - | chr5.1:20725102-20725121 | MS.gene036285:CDS | 45.0% | |
| TACTGCTGGAACTATTGGAG+GGG | - | chr5.1:20725005-20725024 | MS.gene036285:CDS | 45.0% | |
| TATTGTTAGAACAGCCACCC+TGG | - | chr5.1:20725621-20725640 | MS.gene036285:intron | 45.0% | |
| TGGATCAGGAACAGCAACAT+TGG | - | chr5.1:20726207-20726226 | MS.gene036285:intron | 45.0% | |
| TTCAGTAGGGCAAGCTAGAA+AGG | + | chr5.1:20725340-20725359 | None:intergenic | 45.0% | |
| ! | CGGATTATACAAAGGCATGG+GGG | - | chr5.1:20725170-20725189 | MS.gene036285:CDS | 45.0% |
| ! | GCGGATTATACAAAGGCATG+GGG | - | chr5.1:20725169-20725188 | MS.gene036285:CDS | 45.0% |
| ! | TCTACCGAGTTCAGAGGTAT+CGG | + | chr5.1:20726401-20726420 | None:intergenic | 45.0% |
| !! | GCTTTGGAGCTTGACCTTTA+TGG | + | chr5.1:20725064-20725083 | None:intergenic | 45.0% |
| !! | GGCAAATGGAAGCATTGTTG+AGG | - | chr5.1:20725244-20725263 | MS.gene036285:CDS | 45.0% |
| !! | GGCGGATTATACAAAGGCAT+GGG | - | chr5.1:20725168-20725187 | MS.gene036285:CDS | 45.0% |
| !! | TGGCGGATTATACAAAGGCA+TGG | - | chr5.1:20725167-20725186 | MS.gene036285:CDS | 45.0% |
| !!! | CGGAGCTGCTTTTTGGTTTA+TGG | - | chr5.1:20726450-20726469 | MS.gene036285:CDS | 45.0% |
| ACAATAGCAGCTGAAGGTCC+TGG | - | chr5.1:20725147-20725166 | MS.gene036285:CDS | 50.0% | |
| ACTATGGCGCGTGAAATACC+AGG | - | chr5.1:20726319-20726338 | MS.gene036285:CDS | 50.0% | |
| AGAACCTCTACCGAGTTCAG+AGG | + | chr5.1:20726407-20726426 | None:intergenic | 50.0% | |
| AGGTTAGATGCCACCAACGA+TGG | - | chr5.1:20725372-20725391 | MS.gene036285:CDS | 50.0% | |
| CCAAACATTGCGGCATTTCC+TGG | + | chr5.1:20726340-20726359 | None:intergenic | 50.0% | |
| CCAGGAAATGCCGCAATGTT+TGG | - | chr5.1:20726337-20726356 | MS.gene036285:CDS | 50.0% | |
| GATACCTCTGAACTCGGTAG+AGG | - | chr5.1:20726400-20726419 | MS.gene036285:CDS | 50.0% | |
| GCATTGTTGAGGTCACATCC+TGG | - | chr5.1:20725255-20725274 | MS.gene036285:CDS | 50.0% | |
| GGAACACTTCTGCACATTGC+AGG | + | chr5.1:20726610-20726629 | None:intergenic | 50.0% | |
| GGTATTTCACGCGCCATAGT+GGG | + | chr5.1:20726319-20726338 | None:intergenic | 50.0% | |
| GTATTTCACGCGCCATAGTG+GGG | + | chr5.1:20726318-20726337 | None:intergenic | 50.0% | |
| TGCACTCTGTGCTTGTAACC+TGG | + | chr5.1:20726182-20726201 | None:intergenic | 50.0% | |
| TGGTATTTCACGCGCCATAG+TGG | + | chr5.1:20726320-20726339 | None:intergenic | 50.0% | |
| !! | GGTCCTGGCGGATTATACAA+AGG | - | chr5.1:20725162-20725181 | MS.gene036285:CDS | 50.0% |
| AAGGCAGCTACCGTAGCAAG+TGG | + | chr5.1:20725198-20725217 | None:intergenic | 55.0% | |
| ACCTGACCAGGAAGTGGTGT+AGG | + | chr5.1:20725090-20725109 | None:intergenic | 55.0% | |
| ACTCATCCACACGGTCGATC+TGG | - | chr5.1:20725792-20725811 | MS.gene036285:intron | 55.0% | |
| ATAGCAGCTGAAGGTCCTGG+CGG | - | chr5.1:20725150-20725169 | MS.gene036285:CDS | 55.0% | |
| CAAGCACAGAGTGCACTAGC+TGG | - | chr5.1:20726187-20726206 | MS.gene036285:intron | 55.0% | |
| CAGAGTGCACTAGCTGGATC+AGG | - | chr5.1:20726193-20726212 | MS.gene036285:intron | 55.0% | |
| GGGGCAGCACAACTGATAGT+TGG | - | chr5.1:20725024-20725043 | MS.gene036285:CDS | 55.0% | |
| GGTTCTCTGATGCTTTCCGG+AGG | - | chr5.1:20726421-20726440 | MS.gene036285:CDS | 55.0% | |
| GTGGCTAAGGACCTTACTGC+TGG | - | chr5.1:20724991-20725010 | MS.gene036285:CDS | 55.0% | |
| GTTGTTTGTGGAGCTGCTGC+CGG | - | chr5.1:20725303-20725322 | MS.gene036285:CDS | 55.0% | |
| TCTGATGCTTTCCGGAGGCT+TGG | - | chr5.1:20726426-20726445 | MS.gene036285:CDS | 55.0% | |
| TTCGGAACCTGACCAGGAAG+TGG | + | chr5.1:20725096-20725115 | None:intergenic | 55.0% | |
| !! | CAAGGGGTTAGTCCCCACTA+TGG | - | chr5.1:20726303-20726322 | MS.gene036285:CDS | 55.0% |
| !! | GAAGTGGTGTAGGCTGGCTT+TGG | + | chr5.1:20725080-20725099 | None:intergenic | 55.0% |
| !! | GGCACCGATACCTCTGAACT+CGG | - | chr5.1:20726394-20726413 | MS.gene036285:CDS | 55.0% |
| ACCTCTCACGCAGACACGCT+GGG | + | chr5.1:20725581-20725600 | None:intergenic | 60.0% | |
| AGCCAGCCTACACCACTTCC+TGG | - | chr5.1:20725081-20725100 | MS.gene036285:CDS | 60.0% | |
| ATGCTTTCCGGAGGCTTGGC+CGG | - | chr5.1:20726430-20726449 | MS.gene036285:CDS | 60.0% | |
| GACCAGGAAGTGGTGTAGGC+TGG | + | chr5.1:20725086-20725105 | None:intergenic | 60.0% | |
| GCCTACACCACTTCCTGGTC+AGG | - | chr5.1:20725086-20725105 | MS.gene036285:CDS | 60.0% | |
| TAGTGGCCAGATCGACCGTG+TGG | + | chr5.1:20725801-20725820 | None:intergenic | 60.0% | |
| !! | CATGGGGGCACCACTTGCTA+CGG | - | chr5.1:20725185-20725204 | MS.gene036285:CDS | 60.0% |
| !!! | GCTTGGCCGGAGCTGCTTTT+TGG | - | chr5.1:20726443-20726462 | MS.gene036285:CDS | 60.0% |
| CACCTCTCACGCAGACACGC+TGG | + | chr5.1:20725582-20725601 | None:intergenic | 65.0% | |
| TCCCAGCGTGTCTGCGTGAG+AGG | - | chr5.1:20725577-20725596 | MS.gene036285:intron | 65.0% | |
| AGCAGCTCCGGCCAAGCCTC+CGG | + | chr5.1:20726440-20726459 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 20724982 | 20726684 | 20724982 | ID=MS.gene036285 |
| chr5.1 | mRNA | 20724982 | 20726684 | 20724982 | ID=MS.gene036285.t1;Parent=MS.gene036285 |
| chr5.1 | exon | 20726293 | 20726684 | 20726293 | ID=MS.gene036285.t1.exon1;Parent=MS.gene036285.t1 |
| chr5.1 | CDS | 20726293 | 20726684 | 20726293 | ID=cds.MS.gene036285.t1;Parent=MS.gene036285.t1 |
| chr5.1 | exon | 20724982 | 20725483 | 20724982 | ID=MS.gene036285.t1.exon2;Parent=MS.gene036285.t1 |
| chr5.1 | CDS | 20724982 | 20725483 | 20724982 | ID=cds.MS.gene036285.t1;Parent=MS.gene036285.t1 |
| Gene Sequence |
| Protein sequence |
