AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036703

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036703.t1 MTR_4g115640 97.693 737 17 0 1 737 1 737 0.0 1457
MS.gene036703.t1 MTR_4g134730 60.000 715 285 1 15 729 33 746 0.0 847
MS.gene036703.t1 MTR_2g005410 58.611 720 289 5 16 729 16 732 0.0 828
MS.gene036703.t1 MTR_6g065650 58.683 714 292 1 16 729 54 764 0.0 825
MS.gene036703.t1 MTR_7g029345 52.885 728 326 7 10 726 35 756 0.0 771
MS.gene036703.t1 MTR_6g023770 54.092 721 318 7 10 726 24 735 0.0 769
MS.gene036703.t1 MTR_6g023770 54.399 682 301 5 49 726 7 682 0.0 738
MS.gene036703.t1 MTR_6g065650 59.223 618 252 0 112 729 1 618 0.0 707
MS.gene036703.t1 MTR_6g023770 55.155 611 264 5 120 726 2 606 0.0 664
MS.gene036703.t1 MTR_5g005990 45.369 745 385 15 1 726 1 742 0.0 570
MS.gene036703.t1 MTR_5g005990 45.369 745 385 15 1 726 1 742 0.0 570
MS.gene036703.t1 MTR_5g005990 45.369 745 385 15 1 726 1 742 0.0 569
MS.gene036703.t1 MTR_5g005990 48.714 583 282 10 159 726 12 592 3.65e-165 492
MS.gene036703.t1 MTR_5g005990 48.714 583 282 10 159 726 12 592 3.65e-165 492
MS.gene036703.t1 MTR_5g009580 85.612 139 8 1 434 572 1 127 2.31e-52 181
MS.gene036703.t1 MTR_5g009580 100.000 33 0 0 693 725 122 154 1.58e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036703.t1 AT5G33280 73.093 721 194 0 6 726 1 721 0.0 1055
MS.gene036703.t1 AT5G49890 60.979 715 276 2 16 729 38 750 0.0 862
MS.gene036703.t1 AT3G27170 53.125 736 329 6 2 727 13 742 0.0 797
MS.gene036703.t1 AT5G40890 52.861 734 331 5 3 727 10 737 0.0 788
MS.gene036703.t1 AT5G40890 54.770 608 268 3 123 727 2 605 0.0 687
MS.gene036703.t1 AT5G26240 45.699 744 379 14 1 726 1 737 0.0 557
MS.gene036703.t1 AT5G26240 45.699 744 379 14 1 726 1 737 0.0 557

Find 183 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAAAAGATTAAGATTT+TGG 0.154444 8.2:+13101679 MS.gene036703:CDS
TCCATTAGAAAGATGGTTAT+TGG 0.184721 8.2:-13097941 None:intergenic
AACCTTTGGCTTTCATTATA+AGG 0.186015 8.2:-13100843 None:intergenic
CCATGTTATTCCATATCTTT+TGG 0.216887 8.2:-13099461 None:intergenic
CACAAGCACCATCATTATTA+AGG 0.234397 8.2:-13100776 None:intergenic
TGCTTCTATCTACAGATTAT+TGG 0.236275 8.2:+13099340 MS.gene036703:intron
TGTCAGTGTGCATGCTAAAT+AGG 0.261184 8.2:-13100471 None:intergenic
GTGTCAGGCTCTCTTGTTAT+TGG 0.261989 8.2:+13099376 MS.gene036703:CDS
GGCCCGCTTCAGATGTTTAA+TGG 0.275031 8.2:+13100931 MS.gene036703:CDS
AGCGACAAATGCGGTTTATT+CGG 0.294443 8.2:+13099943 MS.gene036703:CDS
GCACCTGCTGCTGCTGGTTC+AGG 0.297503 8.2:+13098578 MS.gene036703:CDS
GATGCACCAGTCACGATAAT+TGG 0.304109 8.2:-13100592 None:intergenic
CGCGGAGGCTCGTCAATAAC+AGG 0.309334 8.2:-13101012 None:intergenic
TCGGCATGAGTTTCTAAATA+AGG 0.312251 8.2:-13100868 None:intergenic
ATTACTTACACCGGGGATCT+TGG 0.316979 8.2:-13101355 None:intergenic
TCCAATAACCATCTTTCTAA+TGG 0.326015 8.2:+13097940 MS.gene036703:CDS
CCTCCTTTCCAACATCATAT+TGG 0.329761 8.2:-13098368 None:intergenic
CTTGGCGCCGCTTCTCTTCT+CGG 0.330337 8.2:+13100682 MS.gene036703:CDS
CGTTGTGTGCTGTTGTTCTA+AGG 0.331546 8.2:-13100984 None:intergenic
GGTGGAGAACTGCCCTTCTA+TGG 0.344587 8.2:+13099857 MS.gene036703:intron
TGGGCGCCTGGTTGGAATAT+TGG 0.344948 8.2:+13100618 MS.gene036703:CDS
TGTCAGGCTCTCTTGTTATT+GGG 0.347800 8.2:+13099377 MS.gene036703:CDS
TTTACACCGGAACATATATT+GGG 0.365261 8.2:+13101630 MS.gene036703:CDS
TTATTAAGGGTAGCAATAAC+AGG 0.368806 8.2:-13100762 None:intergenic
GGGTAGCAATAACAGGTTAT+TGG 0.369840 8.2:-13100755 None:intergenic
TTTATAGCACCTGCTGCTGC+TGG 0.370401 8.2:+13098572 MS.gene036703:CDS
GCAAACAAGACGCCGCCAAC+AGG 0.371987 8.2:-13099574 None:intergenic
GTAAGCTTAATTAAGCTTGC+TGG 0.373371 8.2:-13101744 None:intergenic
AGCAAGTATTTCATACCATT+TGG 0.381101 8.2:+13099999 MS.gene036703:CDS
TAAGGCGAAGCATTGGTAAA+AGG 0.383161 8.2:-13101252 None:intergenic
ACAGTAGGTGATGTAGTTAC+AGG 0.385155 8.2:+13100910 MS.gene036703:CDS
TTTATGATTGGTTTAATTGT+TGG 0.388222 8.2:+13098280 MS.gene036703:CDS
CTCTTGAAGAGATGGCATCT+TGG 0.393356 8.2:+13099596 MS.gene036703:CDS
CAGGGAGGTTCCAAAAGATA+TGG 0.397062 8.2:+13099451 MS.gene036703:CDS
TTACTTACACCGGGGATCTT+GGG 0.403779 8.2:-13101354 None:intergenic
ATCGTGACTGGTGCATCGTA+TGG 0.406138 8.2:+13100598 MS.gene036703:CDS
CTTGCTGTTGAGAATCTTGC+TGG 0.409241 8.2:+13098325 MS.gene036703:CDS
CAGGTGCATCAACACCATTT+AGG 0.409541 8.2:-13098622 None:intergenic
GAAAACATTTGCTACACTCT+TGG 0.413686 8.2:-13100803 None:intergenic
AATGCGGTTTATTCGGTAAA+GGG 0.418160 8.2:+13099950 MS.gene036703:CDS
ATTGTTTCCACAACAGTGTA+AGG 0.418715 8.2:-13101270 None:intergenic
CGGATTCTCCATTAGAAAGA+TGG 0.423237 8.2:-13097948 None:intergenic
ACTGTTAACTGCCTCATATA+TGG 0.424377 8.2:-13100892 None:intergenic
GAGGTGAAGGCTTACCTAAA+TGG 0.426989 8.2:+13098608 MS.gene036703:CDS
TGGTGCATCGTATGGGCGCC+TGG 0.427470 8.2:+13100606 MS.gene036703:CDS
TCATAATCGAGACTTTCAAT+AGG 0.433495 8.2:-13098060 None:intergenic
TATTGACGAGCCTCCGCGTT+CGG 0.433552 8.2:+13101017 MS.gene036703:CDS
ATGAATTCTTCAAGCAGGAT+TGG 0.436516 8.2:+13098200 MS.gene036703:CDS
TTGTGAAGTGGAGTTGATAA+TGG 0.438558 8.2:-13098010 None:intergenic
TCTTTAACAATGTGATAAGA+TGG 0.439274 8.2:-13101074 None:intergenic
GCATGTGTGGCAGCATTGTT+AGG 0.439935 8.2:+13099427 MS.gene036703:CDS
GCTGCTTTCCGTGCCCCTGT+TGG 0.441887 8.2:+13099559 MS.gene036703:CDS
TATTGGGAAGGCAGGGCCTA+TGG 0.443171 8.2:+13099393 MS.gene036703:CDS
TCTCTTGTTATTGGGAAGGC+AGG 0.446459 8.2:+13099385 MS.gene036703:CDS
TGTGGCAGCATTGTTAGGTC+AGG 0.447632 8.2:+13099432 MS.gene036703:CDS
TTCTAAATAAGGCAAACCTT+TGG 0.449470 8.2:-13100857 None:intergenic
CTTGTTTGCTCTTGAAGAGA+TGG 0.450612 8.2:+13099588 MS.gene036703:CDS
CGGCGCCAAGTACAGCATAA+AGG 0.456444 8.2:-13100669 None:intergenic
GGACAAGGCTCAACAGCATC+AGG 0.458226 8.2:-13100343 None:intergenic
GTTGAGCCTTGTCCAACAAT+AGG 0.459772 8.2:+13100352 MS.gene036703:CDS
GCTGTTGTAGGAGGGTTACT+TGG 0.461931 8.2:+13100048 MS.gene036703:CDS
GCCTCCGCGTTCGGAAGCTC+CGG 0.464843 8.2:+13101026 MS.gene036703:CDS
ATAACAAGGGTCGGCGAAGA+AGG 0.464994 8.2:-13097975 None:intergenic
TTGGAATTTCTTGTAGATAC+CGG 0.468275 8.2:-13100380 None:intergenic
TTTATTCTTGCTGTTGTAGG+AGG 0.468757 8.2:+13100039 MS.gene036703:CDS
ATAAAGGCCATTGCTAAGAT+TGG 0.469416 8.2:-13100653 None:intergenic
GGGTCGGCGAAGAAGGGGTT+CGG 0.473302 8.2:-13097968 None:intergenic
TGCATACCCAATATATGTTC+CGG 0.473807 8.2:-13101636 None:intergenic
GCAAGGCCATTGTAGTGATT+AGG 0.473948 8.2:-13100409 None:intergenic
TAAGAACGACCGTGATCGAC+GGG 0.474634 8.2:+13099501 MS.gene036703:CDS
CATAATCGAGACTTTCAATA+GGG 0.477328 8.2:-13098059 None:intergenic
TGTGGAATTGTTGCCCCGGC+CGG 0.479171 8.2:+13100559 MS.gene036703:CDS
AATGGCCTTTATGCTGTACT+TGG 0.480398 8.2:+13100664 MS.gene036703:CDS
GGAAGCATTACAGCAGTGTC+AGG 0.481583 8.2:+13099361 MS.gene036703:CDS
GATTGAGGATATACAGTTAA+CGG 0.484019 8.2:+13101197 MS.gene036703:CDS
CAAACAAGACGCCGCCAACA+GGG 0.485853 8.2:-13099573 None:intergenic
GCATCGTATGGGCGCCTGGT+TGG 0.489916 8.2:+13100610 MS.gene036703:CDS
CGCCTGGTTGGAATATTGGT+TGG 0.493221 8.2:+13100622 MS.gene036703:CDS
CTCTTGTTATTGGGAAGGCA+GGG 0.499318 8.2:+13099386 MS.gene036703:CDS
ATTGCTACCCTTAATAATGA+TGG 0.499487 8.2:+13100768 MS.gene036703:CDS
ATAATATGTGGATCAGCAGC+TGG 0.500065 8.2:+13099529 MS.gene036703:CDS
ATGCCTGAACCAGCAGCAGC+AGG 0.501410 8.2:-13098581 None:intergenic
ACAAGCACCATCATTATTAA+GGG 0.504610 8.2:-13100775 None:intergenic
AAATGCGGTTTATTCGGTAA+AGG 0.505387 8.2:+13099949 MS.gene036703:CDS
TAACTATTCGCCATGGGTGA+TGG 0.510722 8.2:-13101111 None:intergenic
TGAGAATGAATTCTTCAAGC+AGG 0.510740 8.2:+13098195 MS.gene036703:CDS
AGTTGAACGTGTGAAGATTG+AGG 0.511472 8.2:+13101182 MS.gene036703:CDS
TGTAGTGATTAGGAGGGCAT+TGG 0.511498 8.2:-13100399 None:intergenic
ACAGTTAACGGAGGAAGAGA+TGG 0.511642 8.2:+13101209 MS.gene036703:CDS
CAGGAGGAACATCTACCAAA+TGG 0.514395 8.2:-13100014 None:intergenic
TAACTGCCTCATATATGGTT+CGG 0.514558 8.2:-13100887 None:intergenic
TTCCAACATCATATTGGATG+TGG 0.515396 8.2:-13098362 None:intergenic
AGCAGGATTGGAGAAGTAGA+GGG 0.517042 8.2:+13098212 MS.gene036703:CDS
TGGCACAAACAGACCGGCCG+GGG 0.518821 8.2:-13100572 None:intergenic
TGCAATATATATGTATGAAG+TGG 0.519757 8.2:+13098248 MS.gene036703:CDS
AGGATTATACCGAATAAAAC+CGG 0.523972 8.2:-13101045 None:intergenic
ATACCGGATCGACCTATTGT+TGG 0.524331 8.2:-13100364 None:intergenic
GCAGGGCCTATGGTGCATAC+AGG 0.525611 8.2:+13099403 MS.gene036703:CDS
CTCTTCTCGGTGGATCTATG+AGG 0.526330 8.2:+13100695 MS.gene036703:CDS
TTGGCACAAACAGACCGGCC+GGG 0.527250 8.2:-13100573 None:intergenic
CTTAATAATGATGGTGCTTG+TGG 0.527699 8.2:+13100777 MS.gene036703:CDS
AGGCTCTCTTGTTATTGGGA+AGG 0.528136 8.2:+13099381 MS.gene036703:CDS
GCTTTCCGTGCCCCTGTTGG+CGG 0.532883 8.2:+13099562 MS.gene036703:CDS
TTATTCTTGCTGTTGTAGGA+GGG 0.533940 8.2:+13100040 MS.gene036703:CDS
AGCTTTCTTGCCATCACCCA+TGG 0.536462 8.2:+13101101 MS.gene036703:CDS
TAACAAGGGTCGGCGAAGAA+GGG 0.536478 8.2:-13097974 None:intergenic
GATGTTTAATGGCATAGAGA+AGG 0.537838 8.2:+13100942 MS.gene036703:CDS
CATGCACCTGTATGCACCAT+AGG 0.537839 8.2:-13099409 None:intergenic
CGACGGGATCTAATAATATG+TGG 0.538742 8.2:+13099517 MS.gene036703:CDS
CTCATGCCGAACCATATATG+AGG 0.540293 8.2:+13100881 MS.gene036703:CDS
GGAAACAATGTCACTGGCAA+AGG 0.542046 8.2:+13101284 MS.gene036703:CDS
TGCCATTAAACATCTGAAGC+GGG 0.542581 8.2:-13100933 None:intergenic
CACCACATCCAATATGATGT+TGG 0.542849 8.2:+13098360 MS.gene036703:CDS
AGGCCATTGTAGTGATTAGG+AGG 0.544990 8.2:-13100406 None:intergenic
TGTCCAACAATAGGTCGATC+CGG 0.548895 8.2:+13100361 MS.gene036703:CDS
AGACGCCGCCAACAGGGGCA+CGG 0.550712 8.2:-13099567 None:intergenic
AAGCAGGATTGGAGAAGTAG+AGG 0.553746 8.2:+13098211 MS.gene036703:CDS
ACTTCACAAGTTGCCATCGT+TGG 0.555294 8.2:+13098024 MS.gene036703:CDS
TTTGTGCCAATTATCGTGAC+TGG 0.556778 8.2:+13100586 MS.gene036703:CDS
AACAGTGTAAGGCGAAGCAT+TGG 0.557234 8.2:-13101259 None:intergenic
AACGATGGCAACTTGTGAAG+TGG 0.562057 8.2:-13098022 None:intergenic
TGCTTCGCCTTACACTGTTG+TGG 0.563362 8.2:+13101263 MS.gene036703:CDS
AAACAAGACGCCGCCAACAG+GGG 0.564819 8.2:-13099572 None:intergenic
CTAAATGGTGTTGATGCACC+TGG 0.567226 8.2:+13098623 MS.gene036703:CDS
TTAAGAACGACCGTGATCGA+CGG 0.567551 8.2:+13099500 MS.gene036703:CDS
GACCTTATAATGAAAGCCAA+AGG 0.568633 8.2:+13100841 MS.gene036703:CDS
GATATGGAATAACATGGAGA+TGG 0.572288 8.2:+13099467 MS.gene036703:CDS
TTCAGGCATATCAGAGGTGA+AGG 0.573293 8.2:+13098595 MS.gene036703:CDS
AACAAGGGTCGGCGAAGAAG+GGG 0.575030 8.2:-13097973 None:intergenic
TCGTGACTGGTGCATCGTAT+GGG 0.575344 8.2:+13100599 MS.gene036703:CDS
ATTGGCACAAACAGACCGGC+CGG 0.578513 8.2:-13100574 None:intergenic
TTATTAGATCCCGTCGATCA+CGG 0.579129 8.2:-13099510 None:intergenic
TAGCTGTGGAATTGTTGCCC+CGG 0.584238 8.2:+13100555 MS.gene036703:CDS
CAGTTAACGGAGGAAGAGAT+GGG 0.584746 8.2:+13101210 MS.gene036703:CDS
TTGGAATATTGGTTGGAGAA+CGG 0.585282 8.2:+13100629 MS.gene036703:CDS
ATGCGGTTTATTCGGTAAAG+GGG 0.589321 8.2:+13099951 MS.gene036703:CDS
GATAATTGGCACAAACAGAC+CGG 0.589695 8.2:-13100578 None:intergenic
CCAAAAGATATGGAATAACA+TGG 0.589697 8.2:+13099461 MS.gene036703:CDS
CTTGTGATACCCAAGATCCC+CGG 0.592899 8.2:+13101345 MS.gene036703:CDS
ACTTTCAATAGGGCAGACAT+TGG 0.593228 8.2:-13098049 None:intergenic
CCAATATGATGTTGGAAAGG+AGG 0.593550 8.2:+13098368 MS.gene036703:CDS
GACATCGTAACTATTCGCCA+TGG 0.594305 8.2:-13101118 None:intergenic
CATCCAATATGATGTTGGAA+AGG 0.600587 8.2:+13098365 MS.gene036703:CDS
CTCCAACCAATATTCCAACC+AGG 0.602011 8.2:-13100624 None:intergenic
ACTACAGAGATCGCCTGTGG+TGG 0.607667 8.2:+13101587 MS.gene036703:CDS
CGCGTTAATATACCCACCAC+AGG 0.609653 8.2:-13101600 None:intergenic
CTACAGAGATCGCCTGTGGT+GGG 0.614442 8.2:+13101588 MS.gene036703:CDS
TGCGGTTTATTCGGTAAAGG+GGG 0.615006 8.2:+13099952 MS.gene036703:CDS
ATGCCATTAAACATCTGAAG+CGG 0.615505 8.2:-13100934 None:intergenic
TGTTGTGGAAACAATGTCAC+TGG 0.617414 8.2:+13101278 MS.gene036703:CDS
GTGGCAGCATTGTTAGGTCA+GGG 0.619163 8.2:+13099433 MS.gene036703:CDS
TAATATGTGGATCAGCAGCT+GGG 0.620560 8.2:+13099530 MS.gene036703:CDS
TTTGAGAAGATAACAAGGGT+CGG 0.629968 8.2:-13097984 None:intergenic
GAACGGACCAATCTTAGCAA+TGG 0.630884 8.2:+13100646 MS.gene036703:CDS
TATATGAGGCAGTTAACAGT+AGG 0.631627 8.2:+13100895 MS.gene036703:CDS
CAGCATCAGGAGGACAAGGT+CGG 0.633252 8.2:-13100330 None:intergenic
ATGTGATAAGATGGTCGCGA+AGG 0.633929 8.2:-13101065 None:intergenic
GGATCTTTGAGAAGATAACA+AGG 0.634504 8.2:-13097989 None:intergenic
ACATCGTAACTATTCGCCAT+GGG 0.638173 8.2:-13101117 None:intergenic
GGTGCATACAGGTGCATGTG+TGG 0.639747 8.2:+13099414 MS.gene036703:CDS
GCAGACATTGGCACCAACGA+TGG 0.641848 8.2:-13098037 None:intergenic
AGATCCACCGAGAAGAGAAG+CGG 0.642785 8.2:-13100689 None:intergenic
AAAACCGGAGCTTCCGAACG+CGG 0.648639 8.2:-13101030 None:intergenic
GGCGCCGCTTCTCTTCTCGG+TGG 0.649897 8.2:+13100685 MS.gene036703:CDS
TCAACAGCATCAGGAGGACA+AGG 0.655016 8.2:-13100334 None:intergenic
CGAATAGTTACGATGTCGTG+AGG 0.657326 8.2:+13101124 MS.gene036703:CDS
TGCTGGTTCAGGCATATCAG+AGG 0.657900 8.2:+13098589 MS.gene036703:CDS
TGCCCTCCTAATCACTACAA+TGG 0.661991 8.2:+13100403 MS.gene036703:CDS
ATACATCAATCATAGCTCGA+AGG 0.662405 8.2:-13099915 None:intergenic
GGCCATTGTAGTGATTAGGA+GGG 0.674612 8.2:-13100405 None:intergenic
GCAGCATTGTTAGGTCAGGG+AGG 0.678679 8.2:+13099436 MS.gene036703:CDS
GCAGGATTGGAGAAGTAGAG+GGG 0.680188 8.2:+13098213 MS.gene036703:CDS
CGGTGGATCTATGAGGACGA+CGG 0.684535 8.2:+13100702 MS.gene036703:CDS
ACCGGAGCTTCCGAACGCGG+AGG 0.685121 8.2:-13101027 None:intergenic
GCGGAGGCTCGTCAATAACA+GGG 0.689264 8.2:-13101011 None:intergenic
CTGTGGTGGGTATATTAACG+CGG 0.695372 8.2:+13101601 MS.gene036703:CDS
CAAGGCTCAACAGCATCAGG+AGG 0.700522 8.2:-13100340 None:intergenic
GATCGACCTATTGTTGGACA+AGG 0.704395 8.2:-13100358 None:intergenic
GATCTTTGAGAAGATAACAA+GGG 0.705563 8.2:-13097988 None:intergenic
CTTAGAACAACAGCACACAA+CGG 0.710603 8.2:+13100985 MS.gene036703:CDS
TGAGGATATACAGTTAACGG+AGG 0.725623 8.2:+13101200 MS.gene036703:CDS
GTGACTACAGAGATCGCCTG+TGG 0.739731 8.2:+13101584 MS.gene036703:CDS
GTATGTCTAAGCGACAAATG+CGG 0.748311 8.2:+13099934 MS.gene036703:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAAAAATCTCA+AGG - chr8.2:13098408-13098427 None:intergenic 10.0%
!! AAAAAAATTAAAAATCTCAA+GGG - chr8.2:13098407-13098426 None:intergenic 10.0%
!! TATATTATAATATGCTTATG+TGG - chr8.2:13098861-13098880 None:intergenic 15.0%
!! TGAAGCAAAAAATATAAAAA+AGG - chr8.2:13098513-13098532 None:intergenic 15.0%
!!! CAACAATAAAATTTTATGTT+AGG - chr8.2:13099642-13099661 None:intergenic 15.0%
!! AATAGTGCATTGAATTTAAA+AGG - chr8.2:13101510-13101529 None:intergenic 20.0%
!! CATAAACAAGAAAGTAATAA+TGG - chr8.2:13098446-13098465 None:intergenic 20.0%
!! TTTATTCAGAAAGTTAACTA+GGG + chr8.2:13101408-13101427 MS.gene036703:intron 20.0%
!!! AATTGATTCAGTTTCTATTA+TGG + chr8.2:13098158-13098177 MS.gene036703:intron 20.0%
!!! ACTAAGTTTTATTTTGTTCA+TGG + chr8.2:13101562-13101581 MS.gene036703:CDS 20.0%
!!! ATTGATTCAGTTTCTATTAT+GGG + chr8.2:13098159-13098178 MS.gene036703:intron 20.0%
!!! GTTTAATTGTTGGTTTTATT+GGG + chr8.2:13098290-13098309 MS.gene036703:CDS 20.0%
!!! TTTATCTGAATATTGTTTCT+AGG + chr8.2:13099761-13099780 MS.gene036703:intron 20.0%
!!! TTTATGATTGGTTTAATTGT+TGG + chr8.2:13098280-13098299 MS.gene036703:CDS 20.0%
!!! TTTTATTCAGAAAGTTAACT+AGG + chr8.2:13101407-13101426 MS.gene036703:intron 20.0%
! AAAGACCTAAACAATGTAAT+TGG - chr8.2:13099004-13099023 None:intergenic 25.0%
! AACTGAATCAATTAACAACA+TGG - chr8.2:13098151-13098170 None:intergenic 25.0%
! AAGAAGACATGATGTAAAAA+TGG - chr8.2:13100284-13100303 None:intergenic 25.0%
! AATAAGCAAATTACTTACAC+CGG - chr8.2:13101367-13101386 None:intergenic 25.0%
! AATTCTGTAAAGAAATCTCA+AGG + chr8.2:13101455-13101474 MS.gene036703:intron 25.0%
! AATTTCCATCTAAAGAAAGA+AGG - chr8.2:13099813-13099832 None:intergenic 25.0%
! ATTTGTGTTAAAAATGAGAC+TGG - chr8.2:13100434-13100453 None:intergenic 25.0%
! GAATTCTGTTATTGGTAAAA+AGG - chr8.2:13099203-13099222 None:intergenic 25.0%
! GGATTGAATCATTAAATTTG+TGG - chr8.2:13099092-13099111 None:intergenic 25.0%
! GTTGCTGATAAAACTTATTT+CGG + chr8.2:13098465-13098484 MS.gene036703:intron 25.0%
! TCTTTAACAATGTGATAAGA+TGG - chr8.2:13101077-13101096 None:intergenic 25.0%
! TGCAATATATATGTATGAAG+TGG + chr8.2:13098248-13098267 MS.gene036703:CDS 25.0%
! TGTCAGACTATATCTAATAA+AGG - chr8.2:13099275-13099294 None:intergenic 25.0%
! TTCCTAGAAAAAATTCTTTC+TGG + chr8.2:13101708-13101727 MS.gene036703:CDS 25.0%
! TTTATGTTAGGAAGATAGAT+AGG - chr8.2:13099630-13099649 None:intergenic 25.0%
! TTTATTAGATATAGTCTGAC+AGG + chr8.2:13099274-13099293 MS.gene036703:intron 25.0%
!! TTTACATCATGTCTTCTTTT+CGG + chr8.2:13100286-13100305 MS.gene036703:CDS 25.0%
!!! AGTAGTTTTAGTTAGAAGAT+GGG + chr8.2:13098938-13098957 MS.gene036703:intron 25.0%
!!! AGTTTTTTGTTCTTTTCATC+TGG + chr8.2:13098086-13098105 MS.gene036703:intron 25.0%
!!! GGTTTAATTGTTGGTTTTAT+TGG + chr8.2:13098289-13098308 MS.gene036703:CDS 25.0%
!!! GTTTTTTGTTCTTTTCATCT+GGG + chr8.2:13098087-13098106 MS.gene036703:intron 25.0%
!!! TAGTAGTTTTAGTTAGAAGA+TGG + chr8.2:13098937-13098956 MS.gene036703:intron 25.0%
!!! TTTTTAAGTATCTTTAGCTG+TGG + chr8.2:13100541-13100560 MS.gene036703:CDS 25.0%
AAAAAAAGCTCTCCATAGAA+GGG - chr8.2:13099872-13099891 None:intergenic 30.0%
AAGATGGGATTACCAAAATT+TGG + chr8.2:13098953-13098972 MS.gene036703:intron 30.0%
AAGTGCCAATTACATTGTTT+AGG + chr8.2:13098996-13099015 MS.gene036703:intron 30.0%
AATAATTCGAAGAATGAGCT+TGG - chr8.2:13100209-13100228 None:intergenic 30.0%
ACAACAGCAAGAATAAAAAC+AGG - chr8.2:13100036-13100055 None:intergenic 30.0%
ACAAGCACCATCATTATTAA+GGG - chr8.2:13100778-13100797 None:intergenic 30.0%
AGCAAGTATTTCATACCATT+TGG + chr8.2:13099999-13100018 MS.gene036703:CDS 30.0%
AGGATTATACCGAATAAAAC+CGG - chr8.2:13101048-13101067 None:intergenic 30.0%
ATAAGCAAATTACTTACACC+GGG - chr8.2:13101366-13101385 None:intergenic 30.0%
ATTATTTACTCTTGCAGGAA+AGG + chr8.2:13100223-13100242 MS.gene036703:intron 30.0%
ATTGCTACCCTTAATAATGA+TGG + chr8.2:13100768-13100787 MS.gene036703:CDS 30.0%
CATAATCGAGACTTTCAATA+GGG - chr8.2:13098062-13098081 None:intergenic 30.0%
CCAAAAGATATGGAATAACA+TGG + chr8.2:13099461-13099480 MS.gene036703:CDS 30.0%
GAAAACCTTCTTTCTTTAGA+TGG + chr8.2:13099805-13099824 MS.gene036703:intron 30.0%
GATTGAGGATATACAGTTAA+CGG + chr8.2:13101197-13101216 MS.gene036703:CDS 30.0%
TAAAAAAAGCTCTCCATAGA+AGG - chr8.2:13099873-13099892 None:intergenic 30.0%
TAAGAACTACAGAAGAACTT+CGG - chr8.2:13098836-13098855 None:intergenic 30.0%
TATACGATGCTGAAATTGTT+TGG + chr8.2:13098877-13098896 MS.gene036703:intron 30.0%
TCATAATCGAGACTTTCAAT+AGG - chr8.2:13098063-13098082 None:intergenic 30.0%
TCCAATAACCATCTTTCTAA+TGG + chr8.2:13097940-13097959 MS.gene036703:CDS 30.0%
TCCATTAGAAAGATGGTTAT+TGG - chr8.2:13097944-13097963 None:intergenic 30.0%
TGCTTCTATCTACAGATTAT+TGG + chr8.2:13099340-13099359 MS.gene036703:intron 30.0%
TTAGATGGAAATTGTCTCAA+AGG + chr8.2:13099820-13099839 MS.gene036703:intron 30.0%
TTATTAAGGGTAGCAATAAC+AGG - chr8.2:13100765-13100784 None:intergenic 30.0%
TTCGAATTATTTACTCTTGC+AGG + chr8.2:13100218-13100237 MS.gene036703:intron 30.0%
TTCTAAATAAGGCAAACCTT+TGG - chr8.2:13100860-13100879 None:intergenic 30.0%
TTGGAATTTCTTGTAGATAC+CGG - chr8.2:13100383-13100402 None:intergenic 30.0%
TTTACACCGGAACATATATT+GGG + chr8.2:13101630-13101649 MS.gene036703:CDS 30.0%
! ATCAGATGATTTTGCAAAGA+AGG + chr8.2:13101155-13101174 MS.gene036703:CDS 30.0%
! CCATGTTATTCCATATCTTT+TGG - chr8.2:13099464-13099483 None:intergenic 30.0%
! CTTTTGTAGTTAAGTCAACA+TGG + chr8.2:13100139-13100158 MS.gene036703:intron 30.0%
! GATCTTTGAGAAGATAACAA+GGG - chr8.2:13097991-13098010 None:intergenic 30.0%
! GCTTTTTGCGTCTATAATAA+CGG + chr8.2:13098547-13098566 MS.gene036703:CDS 30.0%
! GGCATAAACTAACCAAATTT+TGG - chr8.2:13098968-13098987 None:intergenic 30.0%
! GGTGGAAAAGATTAAGATTT+TGG + chr8.2:13101679-13101698 MS.gene036703:CDS 30.0%
! TCAGATGATTTTGCAAAGAA+GGG + chr8.2:13101156-13101175 MS.gene036703:CDS 30.0%
! TGGCTATTGTGTTTTATGAT+TGG + chr8.2:13098268-13098287 MS.gene036703:CDS 30.0%
! TTTTACACCGGAACATATAT+TGG + chr8.2:13101629-13101648 MS.gene036703:CDS 30.0%
! TTTTCACAATGTTTTGCTTG+AGG + chr8.2:13099671-13099690 MS.gene036703:intron 30.0%
!! AACCTTTGGCTTTCATTATA+AGG - chr8.2:13100846-13100865 None:intergenic 30.0%
!! CATGTTGACTTAACTACAAA+AGG - chr8.2:13100141-13100160 None:intergenic 30.0%
!!! GTTTTTATTCTTGCTGTTGT+AGG + chr8.2:13100036-13100055 MS.gene036703:CDS 30.0%
!!! TGCCAGAAAGAATTTTTTCT+AGG - chr8.2:13101713-13101732 None:intergenic 30.0%
AAATGCGGTTTATTCGGTAA+AGG + chr8.2:13099949-13099968 MS.gene036703:CDS 35.0%
AAGAACTACAGAAGAACTTC+GGG - chr8.2:13098835-13098854 None:intergenic 35.0%
AATGCGGTTTATTCGGTAAA+GGG + chr8.2:13099950-13099969 MS.gene036703:CDS 35.0%
ACAGCAAGAATAAAAACAGG+AGG - chr8.2:13100033-13100052 None:intergenic 35.0%
ACTGTTAACTGCCTCATATA+TGG - chr8.2:13100895-13100914 None:intergenic 35.0%
ACTTATTTCGGATTGATTGC+AGG + chr8.2:13098477-13098496 MS.gene036703:intron 35.0%
AGTTTCTATTATGGGTTTGC+AGG + chr8.2:13098167-13098186 MS.gene036703:intron 35.0%
ATAAAGGCCATTGCTAAGAT+TGG - chr8.2:13100656-13100675 None:intergenic 35.0%
ATACATCAATCATAGCTCGA+AGG - chr8.2:13099918-13099937 None:intergenic 35.0%
ATGAATTCTTCAAGCAGGAT+TGG + chr8.2:13098200-13098219 MS.gene036703:CDS 35.0%
ATGAGGCTGAATTCTGTTAT+TGG - chr8.2:13099211-13099230 None:intergenic 35.0%
ATGCCATTAAACATCTGAAG+CGG - chr8.2:13100937-13100956 None:intergenic 35.0%
ATTGTTTCCACAACAGTGTA+AGG - chr8.2:13101273-13101292 None:intergenic 35.0%
CACAAGCACCATCATTATTA+AGG - chr8.2:13100779-13100798 None:intergenic 35.0%
CAGTGACAATGATAGATATG+AGG - chr8.2:13099228-13099247 None:intergenic 35.0%
CATCCAATATGATGTTGGAA+AGG + chr8.2:13098365-13098384 MS.gene036703:CDS 35.0%
CTGATATGAGTCTCACATTA+GGG + chr8.2:13099035-13099054 MS.gene036703:intron 35.0%
GACCTTATAATGAAAGCCAA+AGG + chr8.2:13100841-13100860 MS.gene036703:CDS 35.0%
GATATGGAATAACATGGAGA+TGG + chr8.2:13099467-13099486 MS.gene036703:CDS 35.0%
GATGTTTAATGGCATAGAGA+AGG + chr8.2:13100942-13100961 MS.gene036703:CDS 35.0%
GCAAGGCTACATTGATATAA+GGG - chr8.2:13099113-13099132 None:intergenic 35.0%
GGAAAGAAAAGACAGGATAT+CGG - chr8.2:13099153-13099172 None:intergenic 35.0%
GGAGATCAATAGTTACTTGA+AGG + chr8.2:13098908-13098927 MS.gene036703:intron 35.0%
GTGTTAAGGAAAGAAAAGAC+AGG - chr8.2:13099160-13099179 None:intergenic 35.0%
TAACTGCCTCATATATGGTT+CGG - chr8.2:13100890-13100909 None:intergenic 35.0%
TAAGCAAATTACTTACACCG+GGG - chr8.2:13101365-13101384 None:intergenic 35.0%
TATATGAGGCAGTTAACAGT+AGG + chr8.2:13100895-13100914 MS.gene036703:CDS 35.0%
TCGGCATGAGTTTCTAAATA+AGG - chr8.2:13100871-13100890 None:intergenic 35.0%
TGAGAATGAATTCTTCAAGC+AGG + chr8.2:13098195-13098214 MS.gene036703:CDS 35.0%
TGATATGAGTCTCACATTAG+GGG + chr8.2:13099036-13099055 MS.gene036703:intron 35.0%
TGCATACCCAATATATGTTC+CGG - chr8.2:13101639-13101658 None:intergenic 35.0%
TGTTAAAAATGAGACTGGCA+AGG - chr8.2:13100429-13100448 None:intergenic 35.0%
TTCCAACATCATATTGGATG+TGG - chr8.2:13098365-13098384 None:intergenic 35.0%
TTTGAGAAGATAACAAGGGT+CGG - chr8.2:13097987-13098006 None:intergenic 35.0%
! ACAATGTTTTGCTTGAGGAT+TGG + chr8.2:13099676-13099695 MS.gene036703:intron 35.0%
! AGAAAAGTATACAGTAGGCA+AGG - chr8.2:13099130-13099149 None:intergenic 35.0%
! ATCGGAGAAAAGTATACAGT+AGG - chr8.2:13099135-13099154 None:intergenic 35.0%
! ATTCGAGCTTTTGTCAATGT+TGG + chr8.2:13100498-13100517 MS.gene036703:CDS 35.0%
! CACCTGGAATTTTTACTGTA+CGG + chr8.2:13098639-13098658 MS.gene036703:CDS 35.0%
! CTTAATAATGATGGTGCTTG+TGG + chr8.2:13100777-13100796 MS.gene036703:CDS 35.0%
! GAAAACATTTGCTACACTCT+TGG - chr8.2:13100806-13100825 None:intergenic 35.0%
! GGATCTTTGAGAAGATAACA+AGG - chr8.2:13097992-13098011 None:intergenic 35.0%
! TGTACGGACTCTTTTTGTTA+AGG + chr8.2:13098655-13098674 MS.gene036703:CDS 35.0%
! TTGGAATATTGGTTGGAGAA+CGG + chr8.2:13100629-13100648 MS.gene036703:CDS 35.0%
!! ATCCTTTTCTGGTAAAAAGC+AGG + chr8.2:13101658-13101677 MS.gene036703:CDS 35.0%
!! TCAAAGGTATTCTGTTCTAC+AGG + chr8.2:13099836-13099855 MS.gene036703:intron 35.0%
!! TGAAATTGTTTGGTGTTGTG+TGG + chr8.2:13098887-13098906 MS.gene036703:intron 35.0%
!! TTATTCTTGCTGTTGTAGGA+GGG + chr8.2:13100040-13100059 MS.gene036703:CDS 35.0%
!! TTGTGAAGTGGAGTTGATAA+TGG - chr8.2:13098013-13098032 None:intergenic 35.0%
!! TTTATTCTTGCTGTTGTAGG+AGG + chr8.2:13100039-13100058 MS.gene036703:CDS 35.0%
!!! CTTATACTTTTTCGAGAGGT+CGG + chr8.2:13101309-13101328 MS.gene036703:CDS 35.0%
AATGGCCTTTATGCTGTACT+TGG + chr8.2:13100664-13100683 MS.gene036703:CDS 40.0%
ACAGTAGGTGATGTAGTTAC+AGG + chr8.2:13100910-13100929 MS.gene036703:CDS 40.0%
ACATCGTAACTATTCGCCAT+GGG - chr8.2:13101120-13101139 None:intergenic 40.0%
ACTTTCAATAGGGCAGACAT+TGG - chr8.2:13098052-13098071 None:intergenic 40.0%
AGCGACAAATGCGGTTTATT+CGG + chr8.2:13099943-13099962 MS.gene036703:CDS 40.0%
AGTTGAACGTGTGAAGATTG+AGG + chr8.2:13101182-13101201 MS.gene036703:CDS 40.0%
ATAATATGTGGATCAGCAGC+TGG + chr8.2:13099529-13099548 MS.gene036703:CDS 40.0%
ATGCGGTTTATTCGGTAAAG+GGG + chr8.2:13099951-13099970 MS.gene036703:CDS 40.0%
CACCACATCCAATATGATGT+TGG + chr8.2:13098360-13098379 MS.gene036703:CDS 40.0%
CCAATATGATGTTGGAAAGG+AGG + chr8.2:13098368-13098387 MS.gene036703:CDS 40.0%
CCTAATGTGAGACTCATATC+AGG - chr8.2:13099037-13099056 None:intergenic 40.0%
CCTCCTTTCCAACATCATAT+TGG - chr8.2:13098371-13098390 None:intergenic 40.0%
CCTGATATGAGTCTCACATT+AGG + chr8.2:13099034-13099053 MS.gene036703:intron 40.0%
CGACGGGATCTAATAATATG+TGG + chr8.2:13099517-13099536 MS.gene036703:CDS 40.0%
CGGATTCTCCATTAGAAAGA+TGG - chr8.2:13097951-13097970 None:intergenic 40.0%
CTTAGAACAACAGCACACAA+CGG + chr8.2:13100985-13101004 MS.gene036703:CDS 40.0%
CTTGTTTGCTCTTGAAGAGA+TGG + chr8.2:13099588-13099607 MS.gene036703:CDS 40.0%
GATAATTGGCACAAACAGAC+CGG - chr8.2:13100581-13100600 None:intergenic 40.0%
GGAAAAACCTCAACATTCAG+AGG - chr8.2:13098713-13098732 None:intergenic 40.0%
GGCAAGGCTACATTGATATA+AGG - chr8.2:13099114-13099133 None:intergenic 40.0%
GGGTAGCAATAACAGGTTAT+TGG - chr8.2:13100758-13100777 None:intergenic 40.0%
GTAATTGGCACTTGACAGTT+TGG - chr8.2:13098989-13099008 None:intergenic 40.0%
GTATGTCTAAGCGACAAATG+CGG + chr8.2:13099934-13099953 MS.gene036703:CDS 40.0%
GTCCGTACAGTAAAAATTCC+AGG - chr8.2:13098644-13098663 None:intergenic 40.0%
TAATATGTGGATCAGCAGCT+GGG + chr8.2:13099530-13099549 MS.gene036703:CDS 40.0%
TGAGGATATACAGTTAACGG+AGG + chr8.2:13101200-13101219 MS.gene036703:CDS 40.0%
TGTCAGTGTGCATGCTAAAT+AGG - chr8.2:13100474-13100493 None:intergenic 40.0%
TGTTGTGGAAACAATGTCAC+TGG + chr8.2:13101278-13101297 MS.gene036703:CDS 40.0%
TTATCTATGTCACCCTACGA+AGG - chr8.2:13098734-13098753 None:intergenic 40.0%
TTATTAGATCCCGTCGATCA+CGG - chr8.2:13099513-13099532 None:intergenic 40.0%
TTTGTGCCAATTATCGTGAC+TGG + chr8.2:13100586-13100605 MS.gene036703:CDS 40.0%
! AAGGTATTCTGTTCTACAGG+TGG + chr8.2:13099839-13099858 MS.gene036703:intron 40.0%
! ATTGGGTATGCATCCTTTTC+TGG + chr8.2:13101647-13101666 MS.gene036703:CDS 40.0%
! GTTGAGGTTTTTCCTTCGTA+GGG + chr8.2:13098719-13098738 MS.gene036703:intron 40.0%
! TGCCATTAAACATCTGAAGC+GGG - chr8.2:13100936-13100955 None:intergenic 40.0%
! TGTTCAACGAGCTTGTTTCT+AGG + chr8.2:13099736-13099755 MS.gene036703:intron 40.0%
! TGTTGAGGTTTTTCCTTCGT+AGG + chr8.2:13098718-13098737 MS.gene036703:intron 40.0%
!! CTTTTCTGGTAAAAAGCAGG+TGG + chr8.2:13101661-13101680 MS.gene036703:CDS 40.0%
!! TAAGGCGAAGCATTGGTAAA+AGG - chr8.2:13101255-13101274 None:intergenic 40.0%
!! TGTCAGGCTCTCTTGTTATT+GGG + chr8.2:13099377-13099396 MS.gene036703:CDS 40.0%
!!! CACCTGCTTTTTACCAGAAA+AGG - chr8.2:13101663-13101682 None:intergenic 40.0%
!!! GGCACTTATACTTTTTCGAG+AGG + chr8.2:13101305-13101324 MS.gene036703:CDS 40.0%
AACAGTGTAAGGCGAAGCAT+TGG - chr8.2:13101262-13101281 None:intergenic 45.0%
AACGATGGCAACTTGTGAAG+TGG - chr8.2:13098025-13098044 None:intergenic 45.0%
AAGCAGGATTGGAGAAGTAG+AGG + chr8.2:13098211-13098230 MS.gene036703:CDS 45.0%
ACAGTTAACGGAGGAAGAGA+TGG + chr8.2:13101209-13101228 MS.gene036703:CDS 45.0%
ACTTCACAAGTTGCCATCGT+TGG + chr8.2:13098024-13098043 MS.gene036703:CDS 45.0%
AGCAAGTGCTCGATGTGTTA+AGG - chr8.2:13099174-13099193 None:intergenic 45.0%
AGCAGGATTGGAGAAGTAGA+GGG + chr8.2:13098212-13098231 MS.gene036703:CDS 45.0%
AGGCCATTGTAGTGATTAGG+AGG - chr8.2:13100409-13100428 None:intergenic 45.0%
ATACCGGATCGACCTATTGT+TGG - chr8.2:13100367-13100386 None:intergenic 45.0%
ATGTGATAAGATGGTCGCGA+AGG - chr8.2:13101068-13101087 None:intergenic 45.0%
ATTACTTACACCGGGGATCT+TGG - chr8.2:13101358-13101377 None:intergenic 45.0%
CAGGAGGAACATCTACCAAA+TGG - chr8.2:13100017-13100036 None:intergenic 45.0%
CAGGGAGGTTCCAAAAGATA+TGG + chr8.2:13099451-13099470 MS.gene036703:CDS 45.0%
CAGGTGCATCAACACCATTT+AGG - chr8.2:13098625-13098644 None:intergenic 45.0%
CAGTTAACGGAGGAAGAGAT+GGG + chr8.2:13101210-13101229 MS.gene036703:CDS 45.0%
CGAATAGTTACGATGTCGTG+AGG + chr8.2:13101124-13101143 MS.gene036703:CDS 45.0%
CTCATGCCGAACCATATATG+AGG + chr8.2:13100881-13100900 MS.gene036703:CDS 45.0%
CTCCAACCAATATTCCAACC+AGG - chr8.2:13100627-13100646 None:intergenic 45.0%
CTCTTGAAGAGATGGCATCT+TGG + chr8.2:13099596-13099615 MS.gene036703:CDS 45.0%
GAACGGACCAATCTTAGCAA+TGG + chr8.2:13100646-13100665 MS.gene036703:CDS 45.0%
GACATCGTAACTATTCGCCA+TGG - chr8.2:13101121-13101140 None:intergenic 45.0%
GAGGTGAAGGCTTACCTAAA+TGG + chr8.2:13098608-13098627 MS.gene036703:CDS 45.0%
GATCGACCTATTGTTGGACA+AGG - chr8.2:13100361-13100380 None:intergenic 45.0%
GATGCACCAGTCACGATAAT+TGG - chr8.2:13100595-13100614 None:intergenic 45.0%
GCAAGGCCATTGTAGTGATT+AGG - chr8.2:13100412-13100431 None:intergenic 45.0%
GGAAACAATGTCACTGGCAA+AGG + chr8.2:13101284-13101303 MS.gene036703:CDS 45.0%
GGCCATTGTAGTGATTAGGA+GGG - chr8.2:13100408-13100427 None:intergenic 45.0%
TAACGAGCTCGTTAGTACGA+TGG + chr8.2:13098751-13098770 MS.gene036703:intron 45.0%
TAACTATTCGCCATGGGTGA+TGG - chr8.2:13101114-13101133 None:intergenic 45.0%
TGCCCTCCTAATCACTACAA+TGG + chr8.2:13100403-13100422 MS.gene036703:CDS 45.0%
TGCGGTTTATTCGGTAAAGG+GGG + chr8.2:13099952-13099971 MS.gene036703:CDS 45.0%
TGTCCAACAATAGGTCGATC+CGG + chr8.2:13100361-13100380 MS.gene036703:CDS 45.0%
TTAAGAACGACCGTGATCGA+CGG + chr8.2:13099500-13099519 MS.gene036703:CDS 45.0%
TTACTTACACCGGGGATCTT+GGG - chr8.2:13101357-13101376 None:intergenic 45.0%
TTCAGGCATATCAGAGGTGA+AGG + chr8.2:13098595-13098614 MS.gene036703:CDS 45.0%
! CGTAACGTTGCACACTTTTG+TGG + chr8.2:13100178-13100197 MS.gene036703:intron 45.0%
! CGTTGTGTGCTGTTGTTCTA+AGG - chr8.2:13100987-13101006 None:intergenic 45.0%
! GTCTTCTTTTCGGATTGCCA+TGG + chr8.2:13100296-13100315 MS.gene036703:CDS 45.0%
! GTGTCAGGCTCTCTTGTTAT+TGG + chr8.2:13099376-13099395 MS.gene036703:CDS 45.0%
! GTTGAGCCTTGTCCAACAAT+AGG + chr8.2:13100352-13100371 MS.gene036703:CDS 45.0%
! TGTAGTGATTAGGAGGGCAT+TGG - chr8.2:13100402-13100421 None:intergenic 45.0%
!! AGGCTCTCTTGTTATTGGGA+AGG + chr8.2:13099381-13099400 MS.gene036703:CDS 45.0%
!! CTAAATGGTGTTGATGCACC+TGG + chr8.2:13098623-13098642 MS.gene036703:CDS 45.0%
!! CTCTTGTTATTGGGAAGGCA+GGG + chr8.2:13099386-13099405 MS.gene036703:CDS 45.0%
!! CTGTGGTGGGTATATTAACG+CGG + chr8.2:13101601-13101620 MS.gene036703:CDS 45.0%
!! CTTGCTGTTGAGAATCTTGC+TGG + chr8.2:13098325-13098344 MS.gene036703:CDS 45.0%
!! TCTCTTGTTATTGGGAAGGC+AGG + chr8.2:13099385-13099404 MS.gene036703:CDS 45.0%
!!! TCGGAAGCTCCGGTTTTATT+CGG + chr8.2:13101036-13101055 MS.gene036703:CDS 45.0%
AGATCCACCGAGAAGAGAAG+CGG - chr8.2:13100692-13100711 None:intergenic 50.0%
AGCTTTCTTGCCATCACCCA+TGG + chr8.2:13101101-13101120 MS.gene036703:CDS 50.0%
ATAACAAGGGTCGGCGAAGA+AGG - chr8.2:13097978-13097997 None:intergenic 50.0%
ATCGTGACTGGTGCATCGTA+TGG + chr8.2:13100598-13100617 MS.gene036703:CDS 50.0%
CATGCACCTGTATGCACCAT+AGG - chr8.2:13099412-13099431 None:intergenic 50.0%
CGACACTCCTCTGAATGTTG+AGG + chr8.2:13098703-13098722 MS.gene036703:intron 50.0%
CGCCTGGTTGGAATATTGGT+TGG + chr8.2:13100622-13100641 MS.gene036703:CDS 50.0%
CGCGTTAATATACCCACCAC+AGG - chr8.2:13101603-13101622 None:intergenic 50.0%
CTCTTCTCGGTGGATCTATG+AGG + chr8.2:13100695-13100714 MS.gene036703:CDS 50.0%
CTTGTGATACCCAAGATCCC+CGG + chr8.2:13101345-13101364 MS.gene036703:CDS 50.0%
GCAGGATTGGAGAAGTAGAG+GGG + chr8.2:13098213-13098232 MS.gene036703:CDS 50.0%
GCATGTGTGGCAGCATTGTT+AGG + chr8.2:13099427-13099446 MS.gene036703:CDS 50.0%
GCTGTTGTAGGAGGGTTACT+TGG + chr8.2:13100048-13100067 MS.gene036703:CDS 50.0%
GGCCCGCTTCAGATGTTTAA+TGG + chr8.2:13100931-13100950 MS.gene036703:CDS 50.0%
GTGGCAGCATTGTTAGGTCA+GGG + chr8.2:13099433-13099452 MS.gene036703:CDS 50.0%
TAACAAGGGTCGGCGAAGAA+GGG - chr8.2:13097977-13097996 None:intergenic 50.0%
TAAGAACGACCGTGATCGAC+GGG + chr8.2:13099501-13099520 MS.gene036703:CDS 50.0%
TAGCTGTGGAATTGTTGCCC+CGG + chr8.2:13100555-13100574 MS.gene036703:CDS 50.0%
TCAACAGCATCAGGAGGACA+AGG - chr8.2:13100337-13100356 None:intergenic 50.0%
TCGTGACTGGTGCATCGTAT+GGG + chr8.2:13100599-13100618 MS.gene036703:CDS 50.0%
TGCTTCGCCTTACACTGTTG+TGG + chr8.2:13101263-13101282 MS.gene036703:CDS 50.0%
TGTGGCAGCATTGTTAGGTC+AGG + chr8.2:13099432-13099451 MS.gene036703:CDS 50.0%
TTTATAGCACCTGCTGCTGC+TGG + chr8.2:13098572-13098591 MS.gene036703:CDS 50.0%
! AACGCGGCACGATTTTACAC+CGG + chr8.2:13101617-13101636 MS.gene036703:CDS 50.0%
!! GGAAGCATTACAGCAGTGTC+AGG + chr8.2:13099361-13099380 MS.gene036703:CDS 50.0%
!! TGCTGGTTCAGGCATATCAG+AGG + chr8.2:13098589-13098608 MS.gene036703:CDS 50.0%
AAAACCGGAGCTTCCGAACG+CGG - chr8.2:13101033-13101052 None:intergenic 55.0%
AAACAAGACGCCGCCAACAG+GGG - chr8.2:13099575-13099594 None:intergenic 55.0%
AACAAGGGTCGGCGAAGAAG+GGG - chr8.2:13097976-13097995 None:intergenic 55.0%
ACTACAGAGATCGCCTGTGG+TGG + chr8.2:13101587-13101606 MS.gene036703:CDS 55.0%
ATTGGCACAAACAGACCGGC+CGG - chr8.2:13100577-13100596 None:intergenic 55.0%
CAAACAAGACGCCGCCAACA+GGG - chr8.2:13099576-13099595 None:intergenic 55.0%
CAAGGCTCAACAGCATCAGG+AGG - chr8.2:13100343-13100362 None:intergenic 55.0%
CAGCATCAGGAGGACAAGGT+CGG - chr8.2:13100333-13100352 None:intergenic 55.0%
CGGCGCCAAGTACAGCATAA+AGG - chr8.2:13100672-13100691 None:intergenic 55.0%
CGGTGGATCTATGAGGACGA+CGG + chr8.2:13100702-13100721 MS.gene036703:CDS 55.0%
CTACAGAGATCGCCTGTGGT+GGG + chr8.2:13101588-13101607 MS.gene036703:CDS 55.0%
GCAGACATTGGCACCAACGA+TGG - chr8.2:13098040-13098059 None:intergenic 55.0%
GCAGCATTGTTAGGTCAGGG+AGG + chr8.2:13099436-13099455 MS.gene036703:CDS 55.0%
GCGGAGGCTCGTCAATAACA+GGG - chr8.2:13101014-13101033 None:intergenic 55.0%
GGACAAGGCTCAACAGCATC+AGG - chr8.2:13100346-13100365 None:intergenic 55.0%
GGTGCATACAGGTGCATGTG+TGG + chr8.2:13099414-13099433 MS.gene036703:CDS 55.0%
GGTGGAGAACTGCCCTTCTA+TGG + chr8.2:13099857-13099876 MS.gene036703:intron 55.0%
GTGACTACAGAGATCGCCTG+TGG + chr8.2:13101584-13101603 MS.gene036703:CDS 55.0%
TATTGACGAGCCTCCGCGTT+CGG + chr8.2:13101017-13101036 MS.gene036703:CDS 55.0%
TATTGGGAAGGCAGGGCCTA+TGG + chr8.2:13099393-13099412 MS.gene036703:CDS 55.0%
TGGGCGCCTGGTTGGAATAT+TGG + chr8.2:13100618-13100637 MS.gene036703:CDS 55.0%
! GGTCGGCATTTTGCAAGCCA+TGG - chr8.2:13100316-13100335 None:intergenic 55.0%
ATGCCTGAACCAGCAGCAGC+AGG - chr8.2:13098584-13098603 None:intergenic 60.0%
CGCGGAGGCTCGTCAATAAC+AGG - chr8.2:13101015-13101034 None:intergenic 60.0%
CTTGGCGCCGCTTCTCTTCT+CGG + chr8.2:13100682-13100701 MS.gene036703:CDS 60.0%
GCAAACAAGACGCCGCCAAC+AGG - chr8.2:13099577-13099596 None:intergenic 60.0%
GCAGGGCCTATGGTGCATAC+AGG + chr8.2:13099403-13099422 MS.gene036703:CDS 60.0%
TGTGGAATTGTTGCCCCGGC+CGG + chr8.2:13100559-13100578 MS.gene036703:CDS 60.0%
TTGGCACAAACAGACCGGCC+GGG - chr8.2:13100576-13100595 None:intergenic 60.0%
GCATCGTATGGGCGCCTGGT+TGG + chr8.2:13100610-13100629 MS.gene036703:CDS 65.0%
GCTTTCCGTGCCCCTGTTGG+CGG + chr8.2:13099562-13099581 MS.gene036703:CDS 65.0%
GGGTCGGCGAAGAAGGGGTT+CGG - chr8.2:13097971-13097990 None:intergenic 65.0%
TGGCACAAACAGACCGGCCG+GGG - chr8.2:13100575-13100594 None:intergenic 65.0%
TGGTGCATCGTATGGGCGCC+TGG + chr8.2:13100606-13100625 MS.gene036703:CDS 65.0%
! GCTGCTTTCCGTGCCCCTGT+TGG + chr8.2:13099559-13099578 MS.gene036703:CDS 65.0%
!! GCACCTGCTGCTGCTGGTTC+AGG + chr8.2:13098578-13098597 MS.gene036703:CDS 65.0%
ACCGGAGCTTCCGAACGCGG+AGG - chr8.2:13101030-13101049 None:intergenic 70.0%
AGACGCCGCCAACAGGGGCA+CGG - chr8.2:13099570-13099589 None:intergenic 70.0%
GCCTCCGCGTTCGGAAGCTC+CGG + chr8.2:13101026-13101045 MS.gene036703:CDS 70.0%
GGCGCCGCTTCTCTTCTCGG+TGG + chr8.2:13100685-13100704 MS.gene036703:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 13097937 13101760 13097937 ID=MS.gene036703
chr8.2 mRNA 13097937 13101760 13097937 ID=MS.gene036703.t1;Parent=MS.gene036703
chr8.2 exon 13097937 13098082 13097937 ID=MS.gene036703.t1.exon1;Parent=MS.gene036703.t1
chr8.2 CDS 13097937 13098082 13097937 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
chr8.2 exon 13098189 13098389 13098189 ID=MS.gene036703.t1.exon2;Parent=MS.gene036703.t1
chr8.2 CDS 13098189 13098389 13098189 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
chr8.2 exon 13098499 13098676 13098499 ID=MS.gene036703.t1.exon3;Parent=MS.gene036703.t1
chr8.2 CDS 13098499 13098676 13098499 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
chr8.2 exon 13099355 13099617 13099355 ID=MS.gene036703.t1.exon4;Parent=MS.gene036703.t1
chr8.2 CDS 13099355 13099617 13099355 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
chr8.2 exon 13099858 13100127 13099858 ID=MS.gene036703.t1.exon5;Parent=MS.gene036703.t1
chr8.2 CDS 13099858 13100127 13099858 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
chr8.2 exon 13100240 13101368 13100240 ID=MS.gene036703.t1.exon6;Parent=MS.gene036703.t1
chr8.2 CDS 13100240 13101368 13100240 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
chr8.2 exon 13101554 13101760 13101554 ID=MS.gene036703.t1.exon7;Parent=MS.gene036703.t1
chr8.2 CDS 13101554 13101760 13101554 ID=cds.MS.gene036703.t1;Parent=MS.gene036703.t1
Gene Sequence

>MS.gene036703

ATGTCCAATAACCATCTTTCTAATGGAGAATCCGAACCCCTTCTTCGCCGACCCTTGTTATCTTCTCAAAGATCCATTATCAACTCCACTTCACAAGTTGCCATCGTTGGTGCCAATGTCTGCCCTATTGAAAGTCTCGATTATGAGTTAGTTTTTTGTTCTTTTCATCTGGGTCTTCTTCTTTTGTTCAAAGTTTGAATCTTTTTTATGACCATGTTGTTAATTGATTCAGTTTCTATTATGGGTTTGCAGGATTTTTGAGAATGAATTCTTCAAGCAGGATTGGAGAAGTAGAGGGGTTGTTCAGATTTTGCAATATATATGTATGAAGTGGCTATTGTGTTTTATGATTGGTTTAATTGTTGGTTTTATTGGGTTTTGTAACAATCTTGCTGTTGAGAATCTTGCTGGTATCAAGTTTGTCACCACATCCAATATGATGTTGGAAAGGAGGTACTATCTATGTTCCCTTGAGATTTTTAATTTTTTTTTTCTTTCTTTGTATGCCATTATTACTTTCTTGTTTATGTTGCTGATAAAACTTATTTCGGATTGATTGCAGGTTTATGTTTGCCTTTTTTATATTTTTTGCTTCAAATTTGAGTCTCACGCTTTTTGCGTCTATAATAACGGCTTTTATAGCACCTGCTGCTGCTGGTTCAGGCATATCAGAGGTGAAGGCTTACCTAAATGGTGTTGATGCACCTGGAATTTTTACTGTACGGACTCTTTTTGTTAAGGTATGCAATATACAATGAGTACAATACGACACTCCTCTGAATGTTGAGGTTTTTCCTTCGTAGGGTGACATAGATAACGAGCTCGTTAGTACGATGGAAATATTACACATGACATTGATTTATTATGACATTCTATGTTATACTATGATCATATTCCCGAAGTTCTTCTGTAGTTCTTAAGCCACATAAGCATATTATAATATACGATGCTGAAATTGTTTGGTGTTGTGTGGAGATCAATAGTTACTTGAAGGCTTGTTTAGTAGTTTTAGTTAGAAGATGGGATTACCAAAATTTGGTTAGTTTATGCCAAACTGTCAAGTGCCAATTACATTGTTTAGGTCTTTTTTGAGTTTACCTGATATGAGTCTCACATTAGGGGAATCTCAATCAATACATAAGTGCATTGCATCCACAAATTTAATGATTCAATCCCTTATATCAATGTAGCCTTGCCTACTGTATACTTTTCTCCGATATCCTGTCTTTTCTTTCCTTAACACATCGAGCACTTGCTTTAGTACCTTTTTACCAATAACAGAATTCAGCCTCATATCTATCATTGTCACTGTTGTTTCTAAACTTACTCTACTTTCCTTTATTAGATATAGTCTGACAGGAAGTGTTGTTTTTTCTGAAAAAGTGATTTACTTTCATGTTGCTTGCTTCTATCTACAGATTATTGGAAGCATTACAGCAGTGTCAGGCTCTCTTGTTATTGGGAAGGCAGGGCCTATGGTGCATACAGGTGCATGTGTGGCAGCATTGTTAGGTCAGGGAGGTTCCAAAAGATATGGAATAACATGGAGATGGTTAAGATTTTTTAAGAACGACCGTGATCGACGGGATCTAATAATATGTGGATCAGCAGCTGGGATTGCTGCTGCTTTCCGTGCCCCTGTTGGCGGCGTCTTGTTTGCTCTTGAAGAGATGGCATCTTGGTTTGTATGCCTATCTATCTTCCTAACATAAAATTTTATTGTTGTAAACTCAATTTTCACAATGTTTTGCTTGAGGATTGGAATCATATTTTTGTCATATGAACGACTTTTCATTAACTGTTCAACGAGCTTGTTTCTAGGTGTTTATCTGAATATTGTTTCTAGGTATTTTGTCATGTTTTTTATTGAAAACCTTCTTTCTTTAGATGGAAATTGTCTCAAAGGTATTCTGTTCTACAGGTGGAGAACTGCCCTTCTATGGAGAGCTTTTTTTACTACAGCAACAGTTGCAATTTTCCTTCGAGCTATGATTGATGTATGTCTAAGCGACAAATGCGGTTTATTCGGTAAAGGGGGACTGATAATGTTTGATGCTTATTCAGCAAGTATTTCATACCATTTGGTAGATGTTCCTCCTGTTTTTATTCTTGCTGTTGTAGGAGGGTTACTTGGAAGCTTATTTAATTTTATGACGAACAAAGTTCTTCGCATATACAATGTTATCAACGAGTAAGTTTCACCTTTTGTAGTTAAGTCAACATGGCAAAAATTTAACTTTTCGTAACGTTGCACACTTTTGTGGTCTGTCCAAGCTCATTCTTCGAATTATTTACTCTTGCAGGAAAGGCACTATCTGCAGACTTTTTCTTGCTTGTTTAATCTCCATTTTTACATCATGTCTTCTTTTCGGATTGCCATGGCTTGCAAAATGCCGACCTTGTCCTCCTGATGCTGTTGAGCCTTGTCCAACAATAGGTCGATCCGGTATCTACAAGAAATTCCAATGCCCTCCTAATCACTACAATGGCCTTGCCAGTCTCATTTTTAACACAAATGACGATGCTATCAGAAACCTATTTAGCATGCACACTGACAATGAATTCGAGCTTTTGTCAATGTTGGTTTTTTTTATCATATGTCTCTTTTTAAGTATCTTTAGCTGTGGAATTGTTGCCCCGGCCGGTCTGTTTGTGCCAATTATCGTGACTGGTGCATCGTATGGGCGCCTGGTTGGAATATTGGTTGGAGAACGGACCAATCTTAGCAATGGCCTTTATGCTGTACTTGGCGCCGCTTCTCTTCTCGGTGGATCTATGAGGACGACGGTTTCTCTGTGTGTAATTATGCTAGAACTGACCAATAACCTGTTATTGCTACCCTTAATAATGATGGTGCTTGTGGTCTCCAAGAGTGTAGCAAATGTTTTCAATGCAAATGTATATGACCTTATAATGAAAGCCAAAGGTTTGCCTTATTTAGAAACTCATGCCGAACCATATATGAGGCAGTTAACAGTAGGTGATGTAGTTACAGGCCCGCTTCAGATGTTTAATGGCATAGAGAAGGTTCGCAACATAGTGTTTATCCTTAGAACAACAGCACACAACGGATTCCCTGTTATTGACGAGCCTCCGCGTTCGGAAGCTCCGGTTTTATTCGGTATAATCCTTCGCGACCATCTTATCACATTGTTAAAGAAGAAAGCTTTCTTGCCATCACCCATGGCGAATAGTTACGATGTCGTGAGGAAGTTTTCATCAGATGATTTTGCAAAGAAGGGTTCAGTTGAACGTGTGAAGATTGAGGATATACAGTTAACGGAGGAAGAGATGGGCATGTTCATCGATCTGCATCCTTTTACCAATGCTTCGCCTTACACTGTTGTGGAAACAATGTCACTGGCAAAGGCACTTATACTTTTTCGAGAGGTCGGTTTAAGACACTTGCTTGTGATACCCAAGATCCCCGGTGTAAGTAATTTGCTTATTTCATGTTGCAACTTTTCAATTTTTATTCAGAAAGTTAACTAGGGTGCTAAATTTATATGTTGTTATACAATTCTGTAAAGAAATCTCAAGGTTTTCATTAGTTTTTTCTTGTAAAGAAATCCTTTTAAATTCAATGCACTATTATTATTTTTATTTTTGTTCTGCAGTTCACTAAACTAAGTTTTATTTTGTTCATGGTGACTACAGAGATCGCCTGTGGTGGGTATATTAACGCGGCACGATTTTACACCGGAACATATATTGGGTATGCATCCTTTTCTGGTAAAAAGCAGGTGGAAAAGATTAAGATTTTGGCAAACTTTCCTAGAAAAAATTCTTTCTGGCATCTGAGCAAGACCAGCAAGCTTAATTAA
Protein sequence

>MS.gene036703.t1

MSNNHLSNGESEPLLRRPLLSSQRSIINSTSQVAIVGANVCPIESLDYEIFENEFFKQDWRSRGVVQILQYICMKWLLCFMIGLIVGFIGFCNNLAVENLAGIKFVTTSNMMLERRFMFAFFIFFASNLSLTLFASIITAFIAPAAAGSGISEVKAYLNGVDAPGIFTVRTLFVKIIGSITAVSGSLVIGKAGPMVHTGACVAALLGQGGSKRYGITWRWLRFFKNDRDRRDLIICGSAAGIAAAFRAPVGGVLFALEEMASWWRTALLWRAFFTTATVAIFLRAMIDVCLSDKCGLFGKGGLIMFDAYSASISYHLVDVPPVFILAVVGGLLGSLFNFMTNKVLRIYNVINEKGTICRLFLACLISIFTSCLLFGLPWLAKCRPCPPDAVEPCPTIGRSGIYKKFQCPPNHYNGLASLIFNTNDDAIRNLFSMHTDNEFELLSMLVFFIICLFLSIFSCGIVAPAGLFVPIIVTGASYGRLVGILVGERTNLSNGLYAVLGAASLLGGSMRTTVSLCVIMLELTNNLLLLPLIMMVLVVSKSVANVFNANVYDLIMKAKGLPYLETHAEPYMRQLTVGDVVTGPLQMFNGIEKVRNIVFILRTTAHNGFPVIDEPPRSEAPVLFGIILRDHLITLLKKKAFLPSPMANSYDVVRKFSSDDFAKKGSVERVKIEDIQLTEEEMGMFIDLHPFTNASPYTVVETMSLAKALILFREVGLRHLLVIPKIPGFTKLSFILFMVTTEIACGGYINAARFYTGTYIGYASFSGKKQVEKIKILANFPRKNSFWHLSKTSKLN