AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074085

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074085.t1 MTR_6g023770 97.516 765 19 0 2 766 11 775 0.0 1531
MS.gene074085.t1 MTR_6g023770 97.626 716 17 0 51 766 7 722 0.0 1434
MS.gene074085.t1 MTR_6g023770 97.678 646 15 0 121 766 1 646 0.0 1296
MS.gene074085.t1 MTR_7g029345 80.523 765 137 4 13 766 33 796 0.0 1264
MS.gene074085.t1 MTR_2g005410 53.003 766 345 7 5 760 1 761 0.0 783
MS.gene074085.t1 MTR_4g134730 53.405 749 336 6 19 760 33 775 0.0 764
MS.gene074085.t1 MTR_4g115640 52.902 758 342 8 15 763 10 761 0.0 751
MS.gene074085.t1 MTR_6g065650 50.863 753 356 8 15 760 48 793 0.0 742
MS.gene074085.t1 MTR_6g065650 51.455 653 305 6 114 760 1 647 0.0 649
MS.gene074085.t1 MTR_5g005990 45.908 721 364 12 43 745 44 756 0.0 574
MS.gene074085.t1 MTR_5g005990 45.908 721 364 12 43 745 44 756 0.0 573
MS.gene074085.t1 MTR_5g005990 45.908 721 364 12 43 745 44 756 0.0 573
MS.gene074085.t1 MTR_5g005990 46.844 602 296 10 161 745 12 606 1.30e-160 479
MS.gene074085.t1 MTR_5g005990 46.844 602 296 10 161 745 12 606 1.56e-160 479
MS.gene074085.t1 MTR_5g009580 43.750 160 74 3 435 594 2 145 3.65e-21 92.8
MS.gene074085.t1 MTR_5g009580 50.704 71 30 1 693 763 122 187 4.01e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074085.t1 AT5G40890 76.216 761 178 2 2 760 11 770 0.0 1185
MS.gene074085.t1 AT3G27170 75.395 760 178 3 10 761 18 776 0.0 1181
MS.gene074085.t1 AT5G40890 76.839 639 145 2 124 760 1 638 0.0 1006
MS.gene074085.t1 AT5G49890 54.631 745 325 6 19 756 37 775 0.0 796
MS.gene074085.t1 AT5G33280 52.933 750 339 7 22 763 13 756 0.0 780
MS.gene074085.t1 AT5G26240 45.328 717 367 12 45 745 44 751 0.0 541
MS.gene074085.t1 AT5G26240 45.328 717 367 12 45 745 44 751 0.0 541

Find 150 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTCATTGGATTTCTTTC+TGG 0.088201 6.1:+7196699 None:intergenic
CTTGCTGTTGAGAATATTTC+AGG 0.157177 6.1:-7196209 MS.gene074085:CDS
TTAAGATAAGCTTTGATTTC+AGG 0.172574 6.1:+7195737 None:intergenic
TTTCTTGTTGGACTTCTTAC+TGG 0.181093 6.1:-7196254 MS.gene074085:CDS
TCCTCACTTGGCAAATTCTA+AGG 0.190430 6.1:-7191787 MS.gene074085:CDS
GAAATCAAAGCTTATCTTAA+TGG 0.203923 6.1:-7195734 MS.gene074085:CDS
ATTGTTCCTGTTGCTATTAT+TGG 0.205330 6.1:-7193771 MS.gene074085:CDS
TTTACTCTTGTGTAGATAAT+TGG 0.211535 6.1:-7194218 MS.gene074085:intron
AGAAGAACAATCATTGTTAT+TGG 0.214267 6.1:+7192649 None:intergenic
TTCACACTATATTGCATATT+AGG 0.228870 6.1:-7192898 MS.gene074085:CDS
ATATTAATCGGTTCCGGTTA+TGG 0.236385 6.1:-7192826 MS.gene074085:CDS
GATGGGGTTTCTATATTTCT+TGG 0.238010 6.1:-7195837 MS.gene074085:CDS
CATGGTTTGTTAGCTGTTCT+TGG 0.255803 6.1:-7192760 MS.gene074085:CDS
GGACTGAGGAATGGGAAGTT+AGG 0.277566 6.1:-7192294 MS.gene074085:CDS
TCAAATCCACTTGCTCTTGT+TGG 0.290222 6.1:-7196645 MS.gene074085:CDS
CTGTTGTGGTGGTTGTTCTA+AGG 0.296409 6.1:-7193899 MS.gene074085:CDS
ATATTAGGTTTAATCACTTT+TGG 0.302883 6.1:-7192883 MS.gene074085:CDS
TCATAGGTATCTCCTGTAAT+TGG 0.308572 6.1:-7191858 MS.gene074085:intron
TTTAGAAGTGGTTCATTCAT+TGG 0.308976 6.1:+7196687 None:intergenic
GAAATTTAGTTGGGTTGAAT+TGG 0.324519 6.1:-7192269 MS.gene074085:CDS
ATGATTTGTTCAAGCAAGAT+TGG 0.327111 6.1:-7196334 MS.gene074085:CDS
TCTTGGTGCAGCTTCCTTGA+TGG 0.329813 6.1:-7192743 MS.gene074085:CDS
ATCATAGAATCAAATGGAAA+TGG 0.331073 6.1:-7194091 MS.gene074085:CDS
CATTTGATTCTATGATTGTC+TGG 0.334230 6.1:+7194098 None:intergenic
AGCTGCATTGCTTCCTTACT+AGG 0.340474 6.1:-7194131 MS.gene074085:CDS
AATCACCTGCGGTGCTTCAT+CGG 0.345737 6.1:-7194030 MS.gene074085:CDS
ATCACCTGCGGTGCTTCATC+GGG 0.349818 6.1:-7194029 MS.gene074085:CDS
ATGGGGTTTCTATATTTCTT+GGG 0.352953 6.1:-7195836 MS.gene074085:CDS
TATTTGTGTAAGGTTTCATT+AGG 0.356960 6.1:+7192788 None:intergenic
CAGCTTCCTATGTGTACTAA+TGG 0.357302 6.1:+7194149 None:intergenic
TCGGGATCAGCATCCATAAA+AGG 0.359346 6.1:+7192556 None:intergenic
ATCTTCTTCATAAGATCCTT+AGG 0.361213 6.1:-7193713 MS.gene074085:CDS
TTGAAGAACACTACACATAA+TGG 0.364217 6.1:-7192433 MS.gene074085:CDS
CCTATCATATTAATCGGTTC+CGG 0.368863 6.1:-7192832 MS.gene074085:CDS
TGCTGTGAGTTATAATGTTA+TGG 0.376695 6.1:-7193796 MS.gene074085:CDS
GCTTTGATTTCAGGTATTCC+TGG 0.377213 6.1:+7195746 None:intergenic
TGTCCTACAAATGGAAAATC+AGG 0.380627 6.1:-7193063 MS.gene074085:CDS
AAATTTCTCATCCATGGTTC+GGG 0.381055 6.1:+7192538 None:intergenic
GTTGCTATTATTGGAATCAT+TGG 0.382360 6.1:-7193762 MS.gene074085:CDS
GGTGCAGCTTCCTTGATGGC+AGG 0.386000 6.1:-7192739 MS.gene074085:CDS
TAAATTTCTCATCCATGGTT+CGG 0.391714 6.1:+7192537 None:intergenic
CGACTTGTCTGAAAAGAATC+CGG 0.395081 6.1:+7192116 None:intergenic
TCCGAGGAGGCGTCCATAAC+CGG 0.395962 6.1:+7192813 None:intergenic
CTTGTCAAGATACCAATTAC+AGG 0.403141 6.1:+7191846 None:intergenic
CCATGATCAATATTTGTGTA+AGG 0.405176 6.1:+7192778 None:intergenic
GAAAAGGAGGACTGAGGAAT+GGG 0.406567 6.1:-7192302 MS.gene074085:CDS
TGGTTACTTGCATTTCTTGT+TGG 0.406665 6.1:-7196266 MS.gene074085:CDS
ACCATGGATGAGAAATTTAT+CGG 0.409902 6.1:-7192533 MS.gene074085:CDS
CCGGAACCGATTAATATGAT+AGG 0.411041 6.1:+7192832 None:intergenic
TATAAACTCCTTACTGTTGT+TGG 0.411697 6.1:-7196185 MS.gene074085:CDS
TTCACATCAGTATGTCAATA+TGG 0.412617 6.1:-7193132 MS.gene074085:CDS
AGTTAGGGAGAAATTTAGTT+GGG 0.414582 6.1:-7192278 MS.gene074085:CDS
TGGTGTTACTAAAGATGAAA+TGG 0.421014 6.1:-7192215 MS.gene074085:CDS
AAAGACTGATAGAATGTTGT+AGG 0.423015 6.1:+7191809 None:intergenic
TTGGATACATTCAACAAGAA+AGG 0.423443 6.1:-7196166 MS.gene074085:intron
GACTGAGGAATGGGAAGTTA+GGG 0.427820 6.1:-7192293 MS.gene074085:CDS
CCTTACACAAATATTGATCA+TGG 0.433080 6.1:-7192778 MS.gene074085:CDS
TTTGGCATTGCAGTTCCATC+AGG 0.433744 6.1:-7192865 MS.gene074085:CDS
ATTATGTGTAGTGTTCTTCA+AGG 0.435596 6.1:+7192435 None:intergenic
TTCATTGAACTTTGTCATGA+AGG 0.437190 6.1:-7193873 MS.gene074085:CDS
AAACAATTCAACTGTCCAAA+TGG 0.439890 6.1:-7193033 MS.gene074085:CDS
TTATCAATGTGTCCTACAAA+TGG 0.441358 6.1:-7193072 MS.gene074085:CDS
GGAATCATTGGTGGTGTCTT+GGG 0.442704 6.1:-7193750 MS.gene074085:CDS
GCTCCAACTGCTGCTGGACC+AGG 0.447001 6.1:-7195764 MS.gene074085:CDS
TGCAATACATAATCTTGAAA+TGG 0.449525 6.1:-7196286 MS.gene074085:CDS
TGGTAACAAAAGAAGATTGT+TGG 0.450100 6.1:+7192669 None:intergenic
AGGTCATTGTAATGGCCATT+TGG 0.452481 6.1:+7193018 None:intergenic
TGGACCTCCTTGGCCTAGTA+AGG 0.454375 6.1:+7194118 None:intergenic
ATGATTCCAATAATAGCAAC+AGG 0.455895 6.1:+7193765 None:intergenic
AAGTTAGGGAGAAATTTAGT+TGG 0.461080 6.1:-7192279 MS.gene074085:CDS
TGGAATCATTGGTGGTGTCT+TGG 0.466795 6.1:-7193751 MS.gene074085:CDS
ACTGTAGCACCATACATGTT+TGG 0.469306 6.1:+7195701 None:intergenic
CAGACAATCATAGAATCAAA+TGG 0.472741 6.1:-7194097 MS.gene074085:CDS
TCATAGAATCAAATGGAAAT+GGG 0.475108 6.1:-7194090 MS.gene074085:CDS
AGAAAAGGAGGACTGAGGAA+TGG 0.475415 6.1:-7192303 MS.gene074085:CDS
TATGATTGTCTGGACCTCCT+TGG 0.475695 6.1:+7194108 None:intergenic
ACCGATAAATTTCTCATCCA+TGG 0.475725 6.1:+7192532 None:intergenic
GTACCGAAGTATCAAGCGTC+CGG 0.476442 6.1:-7192073 MS.gene074085:CDS
TTGAAGAGGTTGCAAGTTGG+TGG 0.477692 6.1:-7193959 MS.gene074085:CDS
TCTTCTTCATAAGATCCTTA+GGG 0.478357 6.1:-7193712 MS.gene074085:CDS
TCTATCAGTCTTTCCTCACT+TGG 0.479981 6.1:-7191799 MS.gene074085:CDS
AACGGAGTTGTATTAGTAAG+AGG 0.483998 6.1:+7192172 None:intergenic
GTACTCTCTAACACGGTAAA+CGG 0.487045 6.1:+7192154 None:intergenic
TGTTGTGGTGGTTGTTCTAA+GGG 0.487077 6.1:-7193898 MS.gene074085:CDS
GTTTCAGCAGGTCTAGACTT+AGG 0.488980 6.1:-7194182 MS.gene074085:CDS
GGAAATATTGAAGATGTTGT+TGG 0.492678 6.1:-7192235 MS.gene074085:CDS
GTGCAGCTTCCTTGATGGCA+GGG 0.493087 6.1:-7192738 MS.gene074085:CDS
GACTTGTCTGAAAAGAATCC+GGG 0.495748 6.1:+7192117 None:intergenic
TAAAAGTGCTTAAGAAGAAG+TGG 0.498900 6.1:-7192336 MS.gene074085:CDS
TCCGGTTATGGACGCCTCCT+CGG 0.498980 6.1:-7192814 MS.gene074085:CDS
GCTATTATTGGAATCATTGG+TGG 0.505096 6.1:-7193759 MS.gene074085:CDS
TACCGAAGTATCAAGCGTCC+GGG 0.508324 6.1:-7192072 MS.gene074085:CDS
TTGTGGATGCAGGTACTTGA+TGG 0.510665 6.1:-7195855 MS.gene074085:intron
TGAATGAACCACTTCTAAAG+AGG 0.516959 6.1:-7196683 MS.gene074085:CDS
TCTCATTGACCCTGCCATCA+AGG 0.518494 6.1:+7192729 None:intergenic
TGGATGAGAAATTTATCGGT+TGG 0.519696 6.1:-7192529 MS.gene074085:CDS
TCATTGAACTTTGTCATGAA+GGG 0.520123 6.1:-7193872 MS.gene074085:CDS
GGTCTAGACTTAGGAAAAGA+AGG 0.522749 6.1:-7194173 MS.gene074085:CDS
GTTCTATTCCTCTTTAGAAG+TGG 0.525364 6.1:+7196675 None:intergenic
TTGCTGTTGAGAATATTTCA+GGG 0.529034 6.1:-7196208 MS.gene074085:CDS
CCTCACTTGGCAAATTCTAA+GGG 0.529946 6.1:-7191786 MS.gene074085:CDS
ACTTATCGATGTTAAATCAT+CGG 0.530638 6.1:-7192503 MS.gene074085:CDS
AGCATAGGAGCTGTTTCAGC+AGG 0.530901 6.1:-7194194 MS.gene074085:CDS
GAACGCCGCCGACAGGTGCT+CGG 0.531338 6.1:+7193991 None:intergenic
TGATGAGATTATAGACCCTA+AGG 0.532302 6.1:+7193697 None:intergenic
ACCCCGGACGCTTGATACTT+CGG 0.536717 6.1:+7192070 None:intergenic
GAATGTATCCAACAACAGTA+AGG 0.541275 6.1:+7196177 None:intergenic
CTCTTGAAGAGGTTGCAAGT+TGG 0.544699 6.1:-7193962 MS.gene074085:CDS
CCCTTAGAATTTGCCAAGTG+AGG 0.548090 6.1:+7191786 None:intergenic
TTTGCTCCAACAAGAGCAAG+TGG 0.553142 6.1:+7196639 None:intergenic
GAGATGATACTTCATTTGAA+AGG 0.556971 6.1:-7192583 MS.gene074085:CDS
ATTGCTTCCTTACTAGGCCA+AGG 0.560032 6.1:-7194125 MS.gene074085:CDS
GAAAGAGAAAAGGAGGACTG+AGG 0.560078 6.1:-7192308 MS.gene074085:CDS
TTGTGAGAAGAAGAGTAGCT+AGG 0.560506 6.1:+7192998 None:intergenic
GTTGAATTGGCTGAGAGAGA+AGG 0.561936 6.1:-7192256 MS.gene074085:CDS
GTGTAGATAATTGGAAGCAT+AGG 0.565667 6.1:-7194209 MS.gene074085:intron
CACATCAATGAATGAAAACA+TGG 0.568773 6.1:-7196745 None:intergenic
GTTGAGATAGTAAAATTGCA+TGG 0.571266 6.1:-7192382 MS.gene074085:CDS
CTTCTCATAGCGAAAACCGT+TGG 0.573502 6.1:-7192631 MS.gene074085:CDS
GTTGATACTCCAAACATGTA+TGG 0.573662 6.1:-7195710 MS.gene074085:CDS
GATTGGAGAAGTAGATCAAG+AGG 0.573791 6.1:-7196317 MS.gene074085:CDS
CTGTAATTGGTATCTTGACA+AGG 0.575264 6.1:-7191845 MS.gene074085:CDS
TGGATTGAAACTATCTCCAA+CGG 0.578364 6.1:+7192615 None:intergenic
CACCTGCGGTGCTTCATCGG+GGG 0.578895 6.1:-7194027 MS.gene074085:CDS
TGTGGATGCAGGTACTTGAT+GGG 0.581488 6.1:-7195854 MS.gene074085:intron
ATTCCTGGTCCAGCAGCAGT+TGG 0.584448 6.1:+7195761 None:intergenic
GCGGCTTTCCGAGCACCTGT+CGG 0.587698 6.1:-7193999 MS.gene074085:CDS
GAGTAGCTAGGTCATTGTAA+TGG 0.593124 6.1:+7193010 None:intergenic
GTACGTCGGTAGCAAAAGCC+CGG 0.593456 6.1:-7192135 MS.gene074085:CDS
TTGTAGCACAGCTGTTGTGG+TGG 0.601422 6.1:-7193910 MS.gene074085:CDS
TCATCACCATCATCCATCAC+AGG 0.610057 6.1:+7192406 None:intergenic
AAGGTTTCATTAGGATTCCG+AGG 0.614036 6.1:+7192797 None:intergenic
TCACCTGCGGTGCTTCATCG+GGG 0.617043 6.1:-7194028 MS.gene074085:CDS
AGTATCATCTCATAAACACT+TGG 0.623736 6.1:+7192595 None:intergenic
CACATTGATAAATCATCACA+TGG 0.624696 6.1:+7193084 None:intergenic
GTTGTGGTGGTTGTTCTAAG+GGG 0.627979 6.1:-7193897 MS.gene074085:CDS
GCTTTCCGAGCACCTGTCGG+CGG 0.631605 6.1:-7193996 MS.gene074085:CDS
CTTTGTCATGAAGGGAAATG+TGG 0.644144 6.1:-7193864 MS.gene074085:CDS
TGGATGCTGATCCCGAACCA+TGG 0.647750 6.1:-7192549 MS.gene074085:CDS
GTGGATGCAGGTACTTGATG+GGG 0.653663 6.1:-7195853 MS.gene074085:intron
GAAAATGGTTGATATTCATG+AGG 0.657450 6.1:+7192934 None:intergenic
GAAGGTCCATTAGTACACAT+AGG 0.663760 6.1:-7194155 MS.gene074085:CDS
GCTTCCTTACTAGGCCAAGG+AGG 0.666145 6.1:-7194122 MS.gene074085:CDS
ACCGAAGTATCAAGCGTCCG+GGG 0.676913 6.1:-7192071 MS.gene074085:intron
CGCAGGTGATTAGATCGCGA+CGG 0.681239 6.1:+7194042 None:intergenic
CGTCGCGATCTAATCACCTG+CGG 0.700511 6.1:-7194041 MS.gene074085:CDS
ATCAATGAATGAAAACATGG+AGG 0.708106 6.1:-7196742 None:intergenic
GTTTCATTAGGATTCCGAGG+AGG 0.719783 6.1:+7192800 None:intergenic
TACCGACGTACTCTCTAACA+CGG 0.729164 6.1:+7192147 None:intergenic
TACCGTGTTAGAGAGTACGT+CGG 0.776927 6.1:-7192149 MS.gene074085:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAAATAAAATATAT+GGG + chr6.1:7192382-7192401 None:intergenic 0.0%
!! AAATATAATGATGTTATTAT+CGG - chr6.1:7192563-7192582 MS.gene074085:CDS 10.0%
!! AATAAAATTTAAATTTCTCT+AGG + chr6.1:7192992-7193011 None:intergenic 10.0%
!! ATAAAATTTAAATTTCTCTA+GGG + chr6.1:7192991-7193010 None:intergenic 10.0%
!! TAATATATTTGAACAATATT+AGG - chr6.1:7193344-7193363 MS.gene074085:intron 10.0%
!! TACAAAATATAAAAAGAAAA+TGG + chr6.1:7193123-7193142 None:intergenic 10.0%
!! TGAAAATTAATTAGTATTAT+TGG + chr6.1:7193146-7193165 None:intergenic 10.0%
!!! ATTTTCCAAAAATTATATTA+AGG - chr6.1:7193177-7193196 MS.gene074085:CDS 10.0%
!!! ATTTTTATAATGAGAAATTT+TGG - chr6.1:7192391-7192410 MS.gene074085:CDS 10.0%
!! AAAAATATCAAGATTGAAAA+TGG + chr6.1:7195589-7195608 None:intergenic 15.0%
!! ATAAAAAGAAAATGGTTTAA+GGG + chr6.1:7193115-7193134 None:intergenic 15.0%
!! ATAAAAATAAAATATATGGG+AGG + chr6.1:7192379-7192398 None:intergenic 15.0%
!! ATTAACATATTAGACAAATA+TGG + chr6.1:7193718-7193737 None:intergenic 15.0%
!! TAAAAATAAAATATATGGGA+GGG + chr6.1:7192378-7192397 None:intergenic 15.0%
!! TAATTAGCAATAACAAATTT+GGG - chr6.1:7193080-7193099 MS.gene074085:CDS 15.0%
!! TATAAAAAGAAAATGGTTTA+AGG + chr6.1:7193116-7193135 None:intergenic 15.0%
!! TTAATTAGCAATAACAAATT+TGG - chr6.1:7193079-7193098 MS.gene074085:CDS 15.0%
!!! TTCAACCTTAATATAATTTT+TGG + chr6.1:7193185-7193204 None:intergenic 15.0%
!!! TTTTACTTCAAATAATTGAT+GGG - chr6.1:7193429-7193448 MS.gene074085:intron 15.0%
!!! TTTTTACCTATCATATTAAT+CGG - chr6.1:7195667-7195686 MS.gene074085:intron 15.0%
!!! TTTTTACTTCAAATAATTGA+TGG - chr6.1:7193428-7193447 MS.gene074085:intron 15.0%
!! ATCAAATAACTTCAATTAAG+TGG + chr6.1:7192104-7192123 None:intergenic 20.0%
!! ATGAAAAACTAATATAGACA+CGG + chr6.1:7192064-7192083 None:intergenic 20.0%
!! TAAAAGATTAATGTTAGATG+TGG - chr6.1:7193905-7193924 MS.gene074085:CDS 20.0%
!!! AGAATTTTTTACTTTATTGC+AGG - chr6.1:7195305-7195324 MS.gene074085:intron 20.0%
!!! ATATCTAATCTCAAAGTTTT+AGG - chr6.1:7193236-7193255 MS.gene074085:intron 20.0%
!!! ATATTAGGTTTAATCACTTT+TGG - chr6.1:7195622-7195641 MS.gene074085:intron 20.0%
!!! GAGTTTGATCTTATATTTTA+AGG + chr6.1:7193015-7193034 None:intergenic 20.0%
!!! GATTTTTTTCAAATGATTAG+CGG + chr6.1:7194926-7194945 None:intergenic 20.0%
! AAATATCGAGATCATCATAT+TGG + chr6.1:7193304-7193323 None:intergenic 25.0%
! AATATCGAGATCATCATATT+GGG + chr6.1:7193303-7193322 None:intergenic 25.0%
! ACAAACACTTATATGATAAG+TGG + chr6.1:7195103-7195122 None:intergenic 25.0%
! ACTTATCGATGTTAAATCAT+CGG - chr6.1:7196002-7196021 MS.gene074085:intron 25.0%
! AGAAGAACAATCATTGTTAT+TGG + chr6.1:7195859-7195878 None:intergenic 25.0%
! ATCATAGAATCAAATGGAAA+TGG - chr6.1:7194414-7194433 MS.gene074085:intron 25.0%
! CAAGAATCAAGAAAAGAAAT+TGG - chr6.1:7193472-7193491 MS.gene074085:intron 25.0%
! GAAATCAAAGCTTATCTTAA+TGG - chr6.1:7192771-7192790 MS.gene074085:CDS 25.0%
! TAATGTTAGATGTGGTAAAA+TGG - chr6.1:7193913-7193932 MS.gene074085:CDS 25.0%
! TACTTATAAACTATGAAGCA+CGG + chr6.1:7195007-7195026 None:intergenic 25.0%
! TAGTAAATCATTTGAACTCT+AGG + chr6.1:7194258-7194277 None:intergenic 25.0%
! TATTTGTGTAAGGTTTCATT+AGG + chr6.1:7195720-7195739 None:intergenic 25.0%
! TCATAGAATCAAATGGAAAT+GGG - chr6.1:7194415-7194434 MS.gene074085:intron 25.0%
! TGCAATACATAATCTTGAAA+TGG - chr6.1:7192219-7192238 MS.gene074085:CDS 25.0%
! TTCACACTATATTGCATATT+AGG - chr6.1:7195607-7195626 MS.gene074085:intron 25.0%
! TTCATTATCATCTCAAAGAT+GGG - chr6.1:7193535-7193554 MS.gene074085:intron 25.0%
! TTTACTCTTGTGTAGATAAT+TGG - chr6.1:7194287-7194306 MS.gene074085:intron 25.0%
! TTTCATTATCATCTCAAAGA+TGG - chr6.1:7193534-7193553 MS.gene074085:intron 25.0%
!! AATTAAGTTACTCATTTTGC+AGG - chr6.1:7192138-7192157 MS.gene074085:CDS 25.0%
!! CAATTTCTTTTCTTGATTCT+TGG + chr6.1:7193474-7193493 None:intergenic 25.0%
!! TGAGTAACTTAATTAGTTTG+TGG + chr6.1:7192132-7192151 None:intergenic 25.0%
!! TTAAGATAAGCTTTGATTTC+AGG + chr6.1:7192771-7192790 None:intergenic 25.0%
!! TTTTGACCACAATTTTGTAT+CGG - chr6.1:7194098-7194117 MS.gene074085:CDS 25.0%
!! TTTTTACTTTATTGCAGGAA+AGG - chr6.1:7195310-7195329 MS.gene074085:intron 25.0%
!!! CTTTGAGATGATAATGAAAA+AGG + chr6.1:7193533-7193552 None:intergenic 25.0%
!!! GGTCTATTGTCTTATTTAAT+AGG - chr6.1:7193614-7193633 MS.gene074085:intron 25.0%
!!! GTCACAATTATTTTTAACGA+AGG + chr6.1:7192603-7192622 None:intergenic 25.0%
AAACAATTCAACTGTCCAAA+TGG - chr6.1:7195472-7195491 MS.gene074085:intron 30.0%
AAAGACTGATAGAATGTTGT+AGG + chr6.1:7196699-7196718 None:intergenic 30.0%
AAGTTAGGGAGAAATTTAGT+TGG - chr6.1:7196226-7196245 MS.gene074085:CDS 30.0%
AATATATTAGATCGTGTGAG+AGG + chr6.1:7193333-7193352 None:intergenic 30.0%
AATGTCAGTAGTATTCATGA+AGG - chr6.1:7193741-7193760 MS.gene074085:CDS 30.0%
ACCATGGATGAGAAATTTAT+CGG - chr6.1:7195972-7195991 MS.gene074085:intron 30.0%
AGTATCATCTCATAAACACT+TGG + chr6.1:7195913-7195932 None:intergenic 30.0%
AGTTAGGGAGAAATTTAGTT+GGG - chr6.1:7196227-7196246 MS.gene074085:CDS 30.0%
ATACTGTTTGAGAAAGCTTA+CGG - chr6.1:7196552-7196571 MS.gene074085:intron 30.0%
ATAGGTAAAAAAAGTCCTGA+TGG + chr6.1:7195658-7195677 None:intergenic 30.0%
ATCAACTTATAGACAATGTC+AGG + chr6.1:7194065-7194084 None:intergenic 30.0%
ATCTTCTTCATAAGATCCTT+AGG - chr6.1:7194792-7194811 MS.gene074085:intron 30.0%
ATGATTCCAATAATAGCAAC+AGG + chr6.1:7194743-7194762 None:intergenic 30.0%
ATGGGGTTTCTATATTTCTT+GGG - chr6.1:7192669-7192688 MS.gene074085:CDS 30.0%
ATTATGTGTAGTGTTCTTCA+AGG + chr6.1:7196073-7196092 None:intergenic 30.0%
ATTTAATAGGACCACAATTG+TGG - chr6.1:7193627-7193646 MS.gene074085:intron 30.0%
CAAGAAAAGAAATTGGAAGT+AGG - chr6.1:7193479-7193498 MS.gene074085:intron 30.0%
CACATTGATAAATCATCACA+TGG + chr6.1:7195424-7195443 None:intergenic 30.0%
CAGACAATCATAGAATCAAA+TGG - chr6.1:7194408-7194427 MS.gene074085:intron 30.0%
CATTTGATTCTATGATTGTC+TGG + chr6.1:7194410-7194429 None:intergenic 30.0%
CCATGATCAATATTTGTGTA+AGG + chr6.1:7195730-7195749 None:intergenic 30.0%
CCTTACACAAATATTGATCA+TGG - chr6.1:7195727-7195746 MS.gene074085:CDS 30.0%
CTGATTTCTACTCACTTATT+CGG + chr6.1:7194031-7194050 None:intergenic 30.0%
CTTCTGATCGAATATGTATT+CGG - chr6.1:7191951-7191970 MS.gene074085:intron 30.0%
GAGATGATACTTCATTTGAA+AGG - chr6.1:7195922-7195941 MS.gene074085:intron 30.0%
GGAAATATTGAAGATGTTGT+TGG - chr6.1:7196270-7196289 MS.gene074085:CDS 30.0%
GTTGAGATAGTAAAATTGCA+TGG - chr6.1:7196123-7196142 MS.gene074085:intron 30.0%
TAAATTTCTCATCCATGGTT+CGG + chr6.1:7195971-7195990 None:intergenic 30.0%
TATAAACTCCTTACTGTTGT+TGG - chr6.1:7192320-7192339 MS.gene074085:CDS 30.0%
TCATTATCATCTCAAAGATG+GGG - chr6.1:7193536-7193555 MS.gene074085:intron 30.0%
TCATTCATTGGATTTCTTTC+TGG + chr6.1:7191809-7191828 None:intergenic 30.0%
TCATTGAACTTTGTCATGAA+GGG - chr6.1:7194633-7194652 MS.gene074085:intron 30.0%
TCTTCTTCATAAGATCCTTA+GGG - chr6.1:7194793-7194812 MS.gene074085:intron 30.0%
TCTTGATTCTTGGAGTTATT+TGG + chr6.1:7193464-7193483 None:intergenic 30.0%
TGATGTTCAAATCACATATG+CGG - chr6.1:7193267-7193286 MS.gene074085:intron 30.0%
TGCTGTGAGTTATAATGTTA+TGG - chr6.1:7194709-7194728 MS.gene074085:intron 30.0%
TGGTAACAAAAGAAGATTGT+TGG + chr6.1:7195839-7195858 None:intergenic 30.0%
TTATCAATGTGTCCTACAAA+TGG - chr6.1:7195433-7195452 MS.gene074085:intron 30.0%
TTCACATCAGTATGTCAATA+TGG - chr6.1:7195373-7195392 MS.gene074085:intron 30.0%
TTCATTGAACTTTGTCATGA+AGG - chr6.1:7194632-7194651 MS.gene074085:intron 30.0%
TTGAAGAACACTACACATAA+TGG - chr6.1:7196072-7196091 MS.gene074085:intron 30.0%
TTGGATACATTCAACAAGAA+AGG - chr6.1:7192339-7192358 MS.gene074085:CDS 30.0%
TTTAATAGGACCACAATTGT+GGG - chr6.1:7193628-7193647 MS.gene074085:intron 30.0%
TTTAGAAGTGGTTCATTCAT+TGG + chr6.1:7191821-7191840 None:intergenic 30.0%
! ATTGTTCCTGTTGCTATTAT+TGG - chr6.1:7194734-7194753 MS.gene074085:intron 30.0%
! GAAAATGGTTGATATTCATG+AGG + chr6.1:7195574-7195593 None:intergenic 30.0%
! GAGATGATAATGAAAAAGGT+TGG + chr6.1:7193529-7193548 None:intergenic 30.0%
! GCAATAACAAATTTGGGATA+AGG - chr6.1:7193086-7193105 MS.gene074085:CDS 30.0%
! GTTGCTATTATTGGAATCAT+TGG - chr6.1:7194743-7194762 MS.gene074085:intron 30.0%
! TAAGTTGCTTTCATAAGCTA+TGG - chr6.1:7195175-7195194 MS.gene074085:intron 30.0%
! TATGATGAGAGCATATCAAA+AGG + chr6.1:7196632-7196651 None:intergenic 30.0%
! TGTATGACTAAAAGCATGAT+TGG - chr6.1:7195046-7195065 MS.gene074085:intron 30.0%
! TTGCTGTTGAGAATATTTCA+GGG - chr6.1:7192297-7192316 MS.gene074085:CDS 30.0%
! TTTCCTGATTTTCCATTTGT+AGG + chr6.1:7195448-7195467 None:intergenic 30.0%
! TTTGAAAGGCTTACCTTTTA+TGG - chr6.1:7195936-7195955 MS.gene074085:intron 30.0%
! TTTTGATATGCTCTCATCAT+AGG - chr6.1:7196631-7196650 MS.gene074085:CDS 30.0%
!! AGTGGTTTTTGAAAGAGAAA+AGG - chr6.1:7196187-7196206 MS.gene074085:CDS 30.0%
!! ATGATTTGTTCAAGCAAGAT+TGG - chr6.1:7192171-7192190 MS.gene074085:CDS 30.0%
!! GAAATTTAGTTGGGTTGAAT+TGG - chr6.1:7196236-7196255 MS.gene074085:CDS 30.0%
!! TAAAAGTGCTTAAGAAGAAG+TGG - chr6.1:7196169-7196188 MS.gene074085:CDS 30.0%
!! TGGTGTTACTAAAGATGAAA+TGG - chr6.1:7196290-7196309 MS.gene074085:CDS 30.0%
!!! TGCTACAGTTTTGTTTGTTA+AGG - chr6.1:7192818-7192837 MS.gene074085:CDS 30.0%
AAATTTCTCATCCATGGTTC+GGG + chr6.1:7195970-7195989 None:intergenic 35.0%
AACGGAGTTGTATTAGTAAG+AGG + chr6.1:7196336-7196355 None:intergenic 35.0%
ACCGATAAATTTCTCATCCA+TGG + chr6.1:7195976-7195995 None:intergenic 35.0%
ACCTAACAATCACACAAGAT+AGG + chr6.1:7193597-7193616 None:intergenic 35.0%
AGAAGTGATAAGTGCTACAT+AGG + chr6.1:7191936-7191955 None:intergenic 35.0%
AGGACCACATGTTTGTTTAA+AGG + chr6.1:7193971-7193990 None:intergenic 35.0%
CTGTAATTGGTATCTTGACA+AGG - chr6.1:7196660-7196679 MS.gene074085:CDS 35.0%
CTTGTCAAGATACCAATTAC+AGG + chr6.1:7196662-7196681 None:intergenic 35.0%
GAATGTATCCAACAACAGTA+AGG + chr6.1:7192331-7192350 None:intergenic 35.0%
GATCATATAGTCTCAAGAGA+CGG + chr6.1:7192480-7192499 None:intergenic 35.0%
GATGGGGTTTCTATATTTCT+TGG - chr6.1:7192668-7192687 MS.gene074085:CDS 35.0%
GCTATTATTGGAATCATTGG+TGG - chr6.1:7194746-7194765 MS.gene074085:intron 35.0%
GTAGCCTTTAAACAAACATG+TGG - chr6.1:7193964-7193983 MS.gene074085:CDS 35.0%
GTTGATACTCCAAACATGTA+TGG - chr6.1:7192795-7192814 MS.gene074085:CDS 35.0%
TCATAGGTATCTCCTGTAAT+TGG - chr6.1:7196647-7196666 MS.gene074085:CDS 35.0%
TGATGAGATTATAGACCCTA+AGG + chr6.1:7194811-7194830 None:intergenic 35.0%
TGGATGAGAAATTTATCGGT+TGG - chr6.1:7195976-7195995 MS.gene074085:intron 35.0%
TGGATTGAAACTATCTCCAA+CGG + chr6.1:7195893-7195912 None:intergenic 35.0%
TGGTTACTTGCATTTCTTGT+TGG - chr6.1:7192239-7192258 MS.gene074085:CDS 35.0%
TGTCCTACAAATGGAAAATC+AGG - chr6.1:7195442-7195461 MS.gene074085:intron 35.0%
TTAAACAAACATGTGGTCCT+AGG - chr6.1:7193971-7193990 MS.gene074085:CDS 35.0%
TTAATAGGACCACAATTGTG+GGG - chr6.1:7193629-7193648 MS.gene074085:intron 35.0%
TTCTACTCACTTATTCGGTA+TGG + chr6.1:7194026-7194045 None:intergenic 35.0%
TTTCTTGTTGGACTTCTTAC+TGG - chr6.1:7192251-7192270 MS.gene074085:CDS 35.0%
! AACCTTGATGCTCTAAATTG+TGG - chr6.1:7192633-7192652 MS.gene074085:CDS 35.0%
! ACATAATGGTTTTCCTGTGA+TGG - chr6.1:7196086-7196105 MS.gene074085:intron 35.0%
! ATATTAATCGGTTCCGGTTA+TGG - chr6.1:7195679-7195698 MS.gene074085:intron 35.0%
! ATCCACAATTTAGAGCATCA+AGG + chr6.1:7192638-7192657 None:intergenic 35.0%
! CACATGGTGTACATTTTACT+AGG + chr6.1:7195408-7195427 None:intergenic 35.0%
! CCTATCATATTAATCGGTTC+CGG - chr6.1:7195673-7195692 MS.gene074085:intron 35.0%
! GGTGTACATTTTACTAGGAA+TGG + chr6.1:7195403-7195422 None:intergenic 35.0%
! GTGTAGATAATTGGAAGCAT+AGG - chr6.1:7194296-7194315 MS.gene074085:intron 35.0%
! GTTCTATTCCTCTTTAGAAG+TGG + chr6.1:7191833-7191852 None:intergenic 35.0%
! GTTTTATAAGCTACGAAGCA+CGG - chr6.1:7194864-7194883 MS.gene074085:intron 35.0%
! TGAATGAACCACTTCTAAAG+AGG - chr6.1:7191822-7191841 MS.gene074085:CDS 35.0%
!! AAATGTGGTCTTTTTGGTGA+AGG - chr6.1:7194656-7194675 MS.gene074085:intron 35.0%
!! CAGCTTATTTTCATGAGCTT+AGG - chr6.1:7196601-7196620 MS.gene074085:intron 35.0%
!! CTTGCTGTTGAGAATATTTC+AGG - chr6.1:7192296-7192315 MS.gene074085:CDS 35.0%
!! GGTTTTTGAAAGAGAAAAGG+AGG - chr6.1:7196190-7196209 MS.gene074085:CDS 35.0%
!! TGTTAAGGTGAGTTTGTTAC+AGG - chr6.1:7192833-7192852 MS.gene074085:CDS 35.0%
!!! CGTTCTTTTTTCTCTTGAAG+AGG - chr6.1:7194532-7194551 MS.gene074085:intron 35.0%
AAGGTTTCATTAGGATTCCG+AGG + chr6.1:7195711-7195730 None:intergenic 40.0%
AATCATATGTGTCCGACACT+GGG - chr6.1:7194960-7194979 MS.gene074085:intron 40.0%
ACTGTAGCACCATACATGTT+TGG + chr6.1:7192807-7192826 None:intergenic 40.0%
AGGTCATTGTAATGGCCATT+TGG + chr6.1:7195490-7195509 None:intergenic 40.0%
AGTAGGATTTGATGTGTGGA+AGG - chr6.1:7193496-7193515 MS.gene074085:intron 40.0%
CAGCTTCCTATGTGTACTAA+TGG + chr6.1:7194359-7194378 None:intergenic 40.0%
CATCAACTGGTCATGATACA+AGG - chr6.1:7193673-7193692 MS.gene074085:intron 40.0%
CATCTGATATTGAGTCTACG+AGG + chr6.1:7192525-7192544 None:intergenic 40.0%
CATGTTTAATGAACTCACCC+CGG + chr6.1:7196454-7196473 None:intergenic 40.0%
CCGGAACCGATTAATATGAT+AGG + chr6.1:7195676-7195695 None:intergenic 40.0%
CCTCACTTGGCAAATTCTAA+GGG - chr6.1:7196719-7196738 MS.gene074085:CDS 40.0%
CGACTTGTCTGAAAAGAATC+CGG + chr6.1:7196392-7196411 None:intergenic 40.0%
CTTTGTCATGAAGGGAAATG+TGG - chr6.1:7194641-7194660 MS.gene074085:intron 40.0%
GAAGGTCCATTAGTACACAT+AGG - chr6.1:7194350-7194369 MS.gene074085:intron 40.0%
GACGAACCGATACAAAATTG+TGG + chr6.1:7194107-7194126 None:intergenic 40.0%
GACTTGTCTGAAAAGAATCC+GGG + chr6.1:7196391-7196410 None:intergenic 40.0%
GAGTAGCTAGGTCATTGTAA+TGG + chr6.1:7195498-7195517 None:intergenic 40.0%
GATTGGAGAAGTAGATCAAG+AGG - chr6.1:7192188-7192207 MS.gene074085:CDS 40.0%
GCCTATCTTGTGTGATTGTT+AGG - chr6.1:7193593-7193612 MS.gene074085:intron 40.0%
GGTCTAGACTTAGGAAAAGA+AGG - chr6.1:7194332-7194351 MS.gene074085:intron 40.0%
GTACTCTCTAACACGGTAAA+CGG + chr6.1:7196354-7196373 None:intergenic 40.0%
GTAGGATTTGATGTGTGGAA+GGG - chr6.1:7193497-7193516 MS.gene074085:intron 40.0%
TAATCATATGTGTCCGACAC+TGG - chr6.1:7194959-7194978 MS.gene074085:intron 40.0%
TAGGATTTGATGTGTGGAAG+GGG - chr6.1:7193498-7193517 MS.gene074085:intron 40.0%
TCAAATCCACTTGCTCTTGT+TGG - chr6.1:7191860-7191879 MS.gene074085:intron 40.0%
TCCTCACTTGGCAAATTCTA+AGG - chr6.1:7196718-7196737 MS.gene074085:CDS 40.0%
TCGATGAATTGTTCGCTTGA+TGG + chr6.1:7193041-7193060 None:intergenic 40.0%
TCTATCAGTCTTTCCTCACT+TGG - chr6.1:7196706-7196725 MS.gene074085:CDS 40.0%
TGGAAGTAGGATTTGATGTG+TGG - chr6.1:7193492-7193511 MS.gene074085:intron 40.0%
TGTTGTGGTGGTTGTTCTAA+GGG - chr6.1:7194607-7194626 MS.gene074085:intron 40.0%
TTATCATCTCAAAGATGGGG+CGG - chr6.1:7193539-7193558 MS.gene074085:intron 40.0%
TTGTGAGAAGAAGAGTAGCT+AGG + chr6.1:7195510-7195529 None:intergenic 40.0%
! ATGCTCTAAATTGTGGATGC+AGG - chr6.1:7192640-7192659 MS.gene074085:CDS 40.0%
! ATTTTGTAGCACAGCTGTTG+TGG - chr6.1:7194592-7194611 MS.gene074085:intron 40.0%
! CGGATTCTTTTCAGACAAGT+CGG - chr6.1:7196390-7196409 MS.gene074085:intron 40.0%
! GAAGGGAAATGTGGTCTTTT+TGG - chr6.1:7194650-7194669 MS.gene074085:intron 40.0%
! GCTTTGATTTCAGGTATTCC+TGG + chr6.1:7192762-7192781 None:intergenic 40.0%
!!! CGGTATGGCTTTTAAAACAC+CGG + chr6.1:7194011-7194030 None:intergenic 40.0%
!!! TCATCGGTTGTTAGTTTTCG+CGG - chr6.1:7196018-7196037 MS.gene074085:intron 40.0%
AGAAAAGGAGGACTGAGGAA+TGG - chr6.1:7196202-7196221 MS.gene074085:CDS 45.0%
AGCTGCATTGCTTCCTTACT+AGG - chr6.1:7194374-7194393 MS.gene074085:intron 45.0%
AGTCTCACATGTGCTTATGC+TGG - chr6.1:7195240-7195259 MS.gene074085:intron 45.0%
ATTGCTTCCTTACTAGGCCA+AGG - chr6.1:7194380-7194399 MS.gene074085:intron 45.0%
CCCTTAGAATTTGCCAAGTG+AGG + chr6.1:7196722-7196741 None:intergenic 45.0%
CTAGGCTCTATGACTCTATC+CGG - chr6.1:7193989-7194008 MS.gene074085:CDS 45.0%
CTCTTGAAGAGGTTGCAAGT+TGG - chr6.1:7194543-7194562 MS.gene074085:intron 45.0%
CTGTTGTGGTGGTTGTTCTA+AGG - chr6.1:7194606-7194625 MS.gene074085:intron 45.0%
CTTCTCATAGCGAAAACCGT+TGG - chr6.1:7195874-7195893 MS.gene074085:intron 45.0%
GAAAAGGAGGACTGAGGAAT+GGG - chr6.1:7196203-7196222 MS.gene074085:CDS 45.0%
GAAAGAGAAAAGGAGGACTG+AGG - chr6.1:7196197-7196216 MS.gene074085:CDS 45.0%
GACGAAGCGATACAAAACTG+TGG - chr6.1:7194184-7194203 MS.gene074085:CDS 45.0%
GACTGAGGAATGGGAAGTTA+GGG - chr6.1:7196212-7196231 MS.gene074085:CDS 45.0%
GTTGAATTGGCTGAGAGAGA+AGG - chr6.1:7196249-7196268 MS.gene074085:CDS 45.0%
GTTTCAGCAGGTCTAGACTT+AGG - chr6.1:7194323-7194342 MS.gene074085:intron 45.0%
GTTTCATTAGGATTCCGAGG+AGG + chr6.1:7195708-7195727 None:intergenic 45.0%
TACCGACGTACTCTCTAACA+CGG + chr6.1:7196361-7196380 None:intergenic 45.0%
TATCATCTCAAAGATGGGGC+GGG - chr6.1:7193540-7193559 MS.gene074085:intron 45.0%
TATGATTGTCTGGACCTCCT+TGG + chr6.1:7194400-7194419 None:intergenic 45.0%
TCATCACCATCATCCATCAC+AGG + chr6.1:7196102-7196121 None:intergenic 45.0%
TCGGGATCAGCATCCATAAA+AGG + chr6.1:7195952-7195971 None:intergenic 45.0%
TGTGGATGCAGGTACTTGAT+GGG - chr6.1:7192651-7192670 MS.gene074085:CDS 45.0%
TTGTGGATGCAGGTACTTGA+TGG - chr6.1:7192650-7192669 MS.gene074085:CDS 45.0%
TTTGCTCCAACAAGAGCAAG+TGG + chr6.1:7191869-7191888 None:intergenic 45.0%
TTTGGCATTGCAGTTCCATC+AGG - chr6.1:7195640-7195659 MS.gene074085:intron 45.0%
! GTTGTGGTGGTTGTTCTAAG+GGG - chr6.1:7194608-7194627 MS.gene074085:intron 45.0%
! TACCGTGTTAGAGAGTACGT+CGG - chr6.1:7196356-7196375 MS.gene074085:intron 45.0%
! TCATGACCAGTTGATGTGCA+AGG + chr6.1:7193669-7193688 None:intergenic 45.0%
! TTGAAGAGGTTGCAAGTTGG+TGG - chr6.1:7194546-7194565 MS.gene074085:intron 45.0%
!! GGAATCATTGGTGGTGTCTT+GGG - chr6.1:7194755-7194774 MS.gene074085:intron 45.0%
!! TCGCTTCGTCTTGTTTAGAG+CGG + chr6.1:7194174-7194193 None:intergenic 45.0%
!! TGGAATCATTGGTGGTGTCT+TGG - chr6.1:7194754-7194773 MS.gene074085:intron 45.0%
!! TGTGGTCTTTTTGGTGAAGG+TGG - chr6.1:7194659-7194678 MS.gene074085:intron 45.0%
!!! GGTGGAGAAGTGCTCTTTTA+TGG - chr6.1:7194564-7194583 MS.gene074085:intron 45.0%
!!! GGTTTTCCTGTGATGGATGA+TGG - chr6.1:7196093-7196112 MS.gene074085:intron 45.0%
!! CATTATAAAAATAAAATATA+TGG + chr6.1:7192383-7192402 None:intergenic 5.0%
AATCACCTGCGGTGCTTCAT+CGG - chr6.1:7194475-7194494 MS.gene074085:intron 50.0%
ATGTGCAAGGCCAAGGTTTG+AGG + chr6.1:7193656-7193675 None:intergenic 50.0%
CGGATAGAGTCATAGAGCCT+AGG + chr6.1:7193991-7194010 None:intergenic 50.0%
GGACTGAGGAATGGGAAGTT+AGG - chr6.1:7196211-7196230 MS.gene074085:CDS 50.0%
GGATTAACGCATCCCAGTGT+CGG + chr6.1:7194975-7194994 None:intergenic 50.0%
GTGGATGCAGGTACTTGATG+GGG - chr6.1:7192652-7192671 MS.gene074085:CDS 50.0%
TATGAAGCACGGACACTCCT+CGG + chr6.1:7194996-7195015 None:intergenic 50.0%
TCTCATTGACCCTGCCATCA+AGG + chr6.1:7195779-7195798 None:intergenic 50.0%
TGTGCAAGGCCAAGGTTTGA+GGG + chr6.1:7193655-7193674 None:intergenic 50.0%
TTGTAGCACAGCTGTTGTGG+TGG - chr6.1:7194595-7194614 MS.gene074085:intron 50.0%
! AGCATAGGAGCTGTTTCAGC+AGG - chr6.1:7194311-7194330 MS.gene074085:intron 50.0%
! GTACCGAAGTATCAAGCGTC+CGG - chr6.1:7196432-7196451 MS.gene074085:intron 50.0%
! TACCGAAGTATCAAGCGTCC+GGG - chr6.1:7196433-7196452 MS.gene074085:intron 50.0%
! TAGTTTTCGCGGCGTGGAAA+AGG - chr6.1:7196029-7196048 MS.gene074085:intron 50.0%
! TGTTTTGCTCCAACTGCTGC+TGG - chr6.1:7192735-7192754 MS.gene074085:CDS 50.0%
ACCCCGGACGCTTGATACTT+CGG + chr6.1:7196438-7196457 None:intergenic 55.0%
ATCACCTGCGGTGCTTCATC+GGG - chr6.1:7194476-7194495 MS.gene074085:intron 55.0%
ATTCCTGGTCCAGCAGCAGT+TGG + chr6.1:7192747-7192766 None:intergenic 55.0%
ATTGTGGGGCCCTCAAACCT+TGG - chr6.1:7193643-7193662 MS.gene074085:intron 55.0%
CACTGGGATGCGTTAATCCG+AGG - chr6.1:7194976-7194995 MS.gene074085:intron 55.0%
CGCAGGTGATTAGATCGCGA+CGG + chr6.1:7194466-7194485 None:intergenic 55.0%
CGTCGCGATCTAATCACCTG+CGG - chr6.1:7194464-7194483 MS.gene074085:intron 55.0%
GAAAAAAGAACGCCGCCGAC+AGG + chr6.1:7194524-7194543 None:intergenic 55.0%
GCTTCCTTACTAGGCCAAGG+AGG - chr6.1:7194383-7194402 MS.gene074085:intron 55.0%
GTACGTCGGTAGCAAAAGCC+CGG - chr6.1:7196370-7196389 MS.gene074085:intron 55.0%
GTTTGAGGGCCCCACAATTG+TGG + chr6.1:7193641-7193660 None:intergenic 55.0%
TGCTTCATCGGGGGTTTGTG+CGG - chr6.1:7194487-7194506 MS.gene074085:intron 55.0%
TGGACCTCCTTGGCCTAGTA+AGG + chr6.1:7194390-7194409 None:intergenic 55.0%
TGGATGCTGATCCCGAACCA+TGG - chr6.1:7195956-7195975 MS.gene074085:intron 55.0%
! ACCGAAGTATCAAGCGTCCG+GGG - chr6.1:7196434-7196453 MS.gene074085:intron 55.0%
! CCAGTTGATGTGCAAGGCCA+AGG + chr6.1:7193663-7193682 None:intergenic 55.0%
! GTGCAGCTTCCTTGATGGCA+GGG - chr6.1:7195767-7195786 MS.gene074085:CDS 55.0%
!! CCTTGGCCTTGCACATCAAC+TGG - chr6.1:7193660-7193679 MS.gene074085:intron 55.0%
!!! GGTTGTTAGTTTTCGCGGCG+TGG - chr6.1:7196023-7196042 MS.gene074085:intron 55.0%
TCACCTGCGGTGCTTCATCG+GGG - chr6.1:7194477-7194496 MS.gene074085:intron 60.0%
TCCGGTTATGGACGCCTCCT+CGG - chr6.1:7195691-7195710 MS.gene074085:CDS 60.0%
!! TCCGAGGAGGCGTCCATAAC+CGG + chr6.1:7195695-7195714 None:intergenic 60.0%
CACCTGCGGTGCTTCATCGG+GGG - chr6.1:7194478-7194497 MS.gene074085:intron 65.0%
GATGGGGCGGGTCGAGAATG+AGG - chr6.1:7193552-7193571 MS.gene074085:intron 65.0%
GCGGCTTTCCGAGCACCTGT+CGG - chr6.1:7194506-7194525 MS.gene074085:intron 65.0%
GCTCCAACTGCTGCTGGACC+AGG - chr6.1:7192741-7192760 MS.gene074085:CDS 65.0%
GCTTTCCGAGCACCTGTCGG+CGG - chr6.1:7194509-7194528 MS.gene074085:intron 65.0%
GGCGGGTCGAGAATGAGGCA+GGG - chr6.1:7193557-7193576 MS.gene074085:intron 65.0%
!! AACCCCCGATGAAGCACCGC+AGG + chr6.1:7194483-7194502 None:intergenic 65.0%
GAACGCCGCCGACAGGTGCT+CGG + chr6.1:7194517-7194536 None:intergenic 70.0%
GGGCGGGTCGAGAATGAGGC+AGG - chr6.1:7193556-7193575 MS.gene074085:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 7191767 7196760 7191767 ID=MS.gene074085
chr6.1 mRNA 7191767 7196760 7191767 ID=MS.gene074085.t1;Parent=MS.gene074085
chr6.1 exon 7196609 7196760 7196609 ID=MS.gene074085.t1.exon1;Parent=MS.gene074085.t1
chr6.1 CDS 7196609 7196760 7196609 ID=cds.MS.gene074085.t1;Parent=MS.gene074085.t1
chr6.1 exon 7196167 7196367 7196167 ID=MS.gene074085.t1.exon2;Parent=MS.gene074085.t1
chr6.1 CDS 7196167 7196367 7196167 ID=cds.MS.gene074085.t1;Parent=MS.gene074085.t1
chr6.1 exon 7195688 7195865 7195688 ID=MS.gene074085.t1.exon3;Parent=MS.gene074085.t1
chr6.1 CDS 7195688 7195865 7195688 ID=cds.MS.gene074085.t1;Parent=MS.gene074085.t1
chr6.1 exon 7193693 7194225 7193693 ID=MS.gene074085.t1.exon4;Parent=MS.gene074085.t1
chr6.1 CDS 7193693 7194225 7193693 ID=cds.MS.gene074085.t1;Parent=MS.gene074085.t1
chr6.1 exon 7192072 7193200 7192072 ID=MS.gene074085.t1.exon5;Parent=MS.gene074085.t1
chr6.1 CDS 7192072 7193200 7192072 ID=cds.MS.gene074085.t1;Parent=MS.gene074085.t1
chr6.1 exon 7191767 7191874 7191767 ID=MS.gene074085.t1.exon6;Parent=MS.gene074085.t1
chr6.1 CDS 7191767 7191874 7191767 ID=cds.MS.gene074085.t1;Parent=MS.gene074085.t1
Gene Sequence

>MS.gene074085

ATGAATGAAAACATGGAGGAAGAACTTGAAGAAAGAGATCCAGAAAGAAATCCAATGAATGAACCACTTCTAAAGAGGAATAGAACACTTTCTTCAAATCCACTTGCTCTTGTTGGAGCAAAAGTTTCTTACATAGAAAGCTTAGATTATGAGTAAGAACTCAAAACCTATGTAGCACTTATCACTTCTGATCGAATATGTATTCGGTTTTTGACATTAACAAATTTGATTATATTCAATGAACTCATTTTTTTTTATAATAATATCGATGTGTCAGTCTCGCGTGTCTGATTTCCGTGTCTATATTAGTTTTTCATAATAACTCGCACAAGATCCACTTAATTGAAGTTATTTGATTTCTTCCACAAACTAATTAAGTTACTCATTTTGCAGGATCAATGAGAATGATTTGTTCAAGCAAGATTGGAGAAGTAGATCAAGAGGTCAAGTGATGCAATACATAATCTTGAAATGGTTACTTGCATTTCTTGTTGGACTTCTTACTGGTTTTATAGCTACTCTTATCAATCTTGCTGTTGAGAATATTTCAGGGTATAAACTCCTTACTGTTGTTGGATACATTCAACAAGAAAGGTTAGAACAAACAACCCTCCCATATATTTTATTTTTATAATGAGAAATTTTGGTCAAATGTGATTAATGACTTCAATATTAGTTGTGTTTTTTTTTTATCTAAAAATTGTAAATATCCGTCTCTTGAGACTATATGATCAATCTCTTACACTGAGCTAACACCTCGTAGACTCAATATCAGATGCGTCGATCACATAAGCATAAATATAATGATGTTATTATCGGATCATAGTCACGTGCCTTCGTTAAAAATAATTGTGACTACAATTTAAAACCTTGATGCTCTAAATTGTGGATGCAGGTACTTGATGGGGTTTCTATATTTCTTGGGCACTAATTTCTTGTTGACATTCATTGCTTCAATTCTGTGTGTTTGTTTTGCTCCAACTGCTGCTGGACCAGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCAAACATGTATGGTGCTACAGTTTTGTTTGTTAAGGTGAGTTTGTTACAGGAATTTGCAACATTACTATCAATTTTTTAATACAATGCTCTCATTTTTTTTTGTTTACATTTTTTTTAAATAAATTAATGAAGTGAGAAATTATTATTAATTAAAGTGATATTAGTGACGATTTTATAGTCGTCCCTAGAGAAATTTAAATTTTATTCCTTAAAATATAAGATCAAACTCTTACCATCAAGCGAACAATTCATCGACAATTATTTTACATCTTATTAATTAGCAATAACAAATTTGGGATAAGGTTTCCCTTAAACCATTTTCTTTTTATATTTTGTACCAATAATACTAATTAATTTTCAATAGTTTGTTTATTTTCCAAAAATTATATTAAGGTTGAATCATGTGAATAATATTGTTGTGTTAACTTACATATCTAATCTCAAAGTTTTAGGTGAACATATGATGTTCAAATCACATATGCGGTTGTTTCTAACCCAATATGATGATCTCGATATTTTAGATGCCTCTCACACGATCTAATATATTTGAACAATATTAGGTGATACTTTACTTAATAGAAGTTCAATATATTTTAACATTTGATTAAAAGATCATAGTATTTTTTTACTTCAAATAATTGATGGGACTAATTTTCCAAATAACTCCAAGAATCAAGAAAAGAAATTGGAAGTAGGATTTGATGTGTGGAAGGGGTTTGTCCAACCTTTTTCATTATCATCTCAAAGATGGGGCGGGTCGAGAATGAGGCAGGGTCATAAGATGCTTGCCTATCTTGTGTGATTGTTAGGTCTATTGTCTTATTTAATAGGACCACAATTGTGGGGCCCTCAAACCTTGGCCTTGCACATCAACTGGTCATGATACAAGGATGTTGTTTTCAATCATTGCCATATTTGTCTAATATGTTAATGTTAATGTCAGTAGTATTCATGAAGGCTCTAATAATAATACATGATAATGATTATAGTATTGTCTAACAAATATTATTGTGAAGAATTTTTTGTTGTTAAGTGCTTTATACGTTTCAAATACATAGTAACACTTTAAATATATGTTTTAGTTATTGTTATTTTTTTGTAAAAGATTAATGTTAGATGTGGTAAAATGGTAAAACATGATCAACAAGATTCAATACAGTAGCCTTTAAACAAACATGTGGTCCTAGGCTCTATGACTCTATCCGGTGTTTTAAAAGCCATACCGAATAAGTGAGTAGAAATCAGTTGAATTATGACCTGACATTGTCTATAAGTTGATTATTCAAGTAGTTTTTTGACCACAATTTTGTATCGGTTCGTCTTGTTTAAAGCTGTTGAATAATAAAACATATTTACTATATTAAACCGCTCTAAACAAGACGAAGCGATACAAAACTGTGGTCAAACTATTTGAATAATCGATTTTTAACTAAAAATAAATCTTAGAAACCTAGAGTTCAAATGATTTACTATATTTCACATTTACTCTTGTGTAGATAATTGGAAGCATAGGAGCTGTTTCAGCAGGTCTAGACTTAGGAAAAGAAGGTCCATTAGTACACATAGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGTCCAGACAATCATAGAATCAAATGGAAATGGGTAAGATACTTCAACAACGATCGTGACCGTCGCGATCTAATCACCTGCGGTGCTTCATCGGGGGTTTGTGCGGCTTTCCGAGCACCTGTCGGCGGCGTTCTTTTTTCTCTTGAAGAGGTTGCAAGTTGGTGGAGAAGTGCTCTTTTATGGAGAACATTTTGTAGCACAGCTGTTGTGGTGGTTGTTCTAAGGGGATTCATTGAACTTTGTCATGAAGGGAAATGTGGTCTTTTTGGTGAAGGTGGTTTGATTATGTTTGATGTTAGTAATGTTGCTGTGAGTTATAATGTTATGGATATTGTTCCTGTTGCTATTATTGGAATCATTGGTGGTGTCTTGGGAAGTCTTTATAATTATCTTCTTCATAAGATCCTTAGGGTCTATAATCTCATCAATCAGTAAGTAATCTCTTCATACTTATGCTCATGTTTTATAAGCTACGAAGCACGGATATGAACACAGACACATGACACTGACACGTCGACACCGCTAATCATTTGAAAAAAATCACATAATTCAGTGTAATCATATGTGTCCGACACTGGGATGCGTTAATCCGAGGAGTGTCCGTGCTTCATAGTTTATAAGTACTTTCTAACTATTGCATATTGTATGACTAAAAGCATGATTGGATAACAACTTAGCGAAGCGCTTATAGCATAACCACTTATCATATAAGTGTTTGTGTATAAACTATTTCTCTAACAAAAGATAAAATAAAGTTAAATTGTTTTTATATAAGTTGCTTTCATAAGCTATGGACATGTACTACTACTAACATATTTTCGTAAGCTCTCTTAAATAGTCTCACATGTGCTTATGCTGGTAGATAAACTTAACTTTTCTTTAGATTATGTGATTAATGATGAGAATTTTTTACTTTATTGCAGGAAAGGAAAATTATACAAGCTTCTTCTAAGTCTCTCAGTATCAATCTTCACATCAGTATGTCAATATGGTCTACCATTCCTAGTAAAATGTACACCATGTGATGATTTATCAATGTGTCCTACAAATGGAAAATCAGGAAACTACAAACAATTCAACTGTCCAAATGGCCATTACAATGACCTAGCTACTCTTCTTCTCACAACAAATGATGATGCAGTTAGAAACATATTCTCAACAAACACACCTCATGAATATCAACCATTTTCAATCTTGATATTTTTCACACTATATTGCATATTAGGTTTAATCACTTTTGGCATTGCAGTTCCATCAGGACTTTTTTTACCTATCATATTAATCGGTTCCGGTTATGGACGCCTCCTCGGAATCCTAATGAAACCTTACACAAATATTGATCATGGTTTGTTAGCTGTTCTTGGTGCAGCTTCCTTGATGGCAGGGTCAATGAGAATGACTGTTTCACTTTGTGTTATCTTTCTTGAACTTACCAACAATCTTCTTTTGTTACCAATAACAATGATTGTTCTTCTCATAGCGAAAACCGTTGGAGATAGTTTCAATCCAAGTGTTTATGAGATGATACTTCATTTGAAAGGCTTACCTTTTATGGATGCTGATCCCGAACCATGGATGAGAAATTTATCGGTTGGAGAACTTATCGATGTTAAATCATCGGTTGTTAGTTTTCGCGGCGTGGAAAAGGTCGCTAACATTGTCGATGCCTTGAAGAACACTACACATAATGGTTTTCCTGTGATGGATGATGGTGATGAAGTTGAGATAGTAAAATTGCATGGAGTGATTTTAAGAGCACATTTGATAAAAGTGCTTAAGAAGAAGTGGTTTTTGAAAGAGAAAAGGAGGACTGAGGAATGGGAAGTTAGGGAGAAATTTAGTTGGGTTGAATTGGCTGAGAGAGAAGGAAATATTGAAGATGTTGTTGGTGTTACTAAAGATGAAATGGAAATGTTTGTTGATCTTCATCCTCTTACTAATACAACTCCGTTTACCGTGTTAGAGAGTACGTCGGTAGCAAAAGCCCGGATTCTTTTCAGACAAGTCGGACTTCGTCATATGCTTGTTGTACCGAAGTATCAAGCGTCCGGGGTGAGTTCATTAAACATGTTCATTATAAATTTTACTTTCACAAGAGCATGTTTAGATCGACTTAATTTAGCTTATCTACTAACGTAATCGTTTTTTATACTGTTTGAGAAAGCTTACGGAAACAACTTATGACAAGTTGTTTTTTCAGCTTATTTTCATGAGCTTAGGTCTAACCTTTTGATATGCTCTCATCATAGGTATCTCCTGTAATTGGTATCTTGACAAGGCATGATCTACTTGCCTACAACATTCTATCAGTCTTTCCTCACTTGGCAAATTCTAAGGGCAGAGAAAAGAACAATTGA
Protein sequence

>MS.gene074085.t1

MNENMEEELEERDPERNPMNEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRSRSRGQVMQYIILKWLLAFLVGLLTGFIATLINLAVENISGYKLLTVVGYIQQERYLMGFLYFLGTNFLLTFIASILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATVLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWKWVRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVASWWRSALLWRTFCSTAVVVVVLRGFIELCHEGKCGLFGEGGLIMFDVSNVAVSYNVMDIVPVAIIGIIGGVLGSLYNYLLHKILRVYNLINQKGKLYKLLLSLSVSIFTSVCQYGLPFLVKCTPCDDLSMCPTNGKSGNYKQFNCPNGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPFSILIFFTLYCILGLITFGIAVPSGLFLPIILIGSGYGRLLGILMKPYTNIDHGLLAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSVYEMILHLKGLPFMDADPEPWMRNLSVGELIDVKSSVVSFRGVEKVANIVDALKNTTHNGFPVMDDGDEVEIVKLHGVILRAHLIKVLKKKWFLKEKRRTEEWEVREKFSWVELAEREGNIEDVVGVTKDEMEMFVDLHPLTNTTPFTVLESTSVAKARILFRQVGLRHMLVVPKYQASGVSPVIGILTRHDLLAYNILSVFPHLANSKGREKNN