Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03694.t1 | XP_013459502.1 | 97 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 6.70E-149 | 536.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03694.t1 | J9U5U9 | 39.2 | 260 | 157 | 1 | 6 | 265 | 3 | 261 | 3.5e-61 | 236.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03694.t1 | A0A072UWT8 | 97.0 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 4.9e-149 | 536.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03694 | MS.gene66455 | PPI |
| MS.gene03694 | MS.gene44503 | PPI |
| MS.gene03694 | MS.gene041911 | PPI |
| MS.gene011748 | MS.gene03694 | PPI |
| MS.gene24472 | MS.gene03694 | PPI |
| MS.gene00497 | MS.gene03694 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03694.t1 | MTR_3g045440 | 97.026 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 0.0 | 543 |
| MS.gene03694.t1 | MTR_6g086560 | 63.498 | 263 | 95 | 1 | 8 | 269 | 17 | 279 | 2.31e-125 | 358 |
| MS.gene03694.t1 | MTR_1g018320 | 38.077 | 260 | 159 | 2 | 7 | 265 | 5 | 263 | 3.78e-73 | 225 |
| MS.gene03694.t1 | MTR_4g095310 | 40.816 | 245 | 143 | 2 | 13 | 256 | 9 | 252 | 1.42e-70 | 218 |
| MS.gene03694.t1 | MTR_5g016150 | 38.776 | 245 | 148 | 2 | 13 | 256 | 9 | 252 | 7.29e-68 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03694.t1 | AT3G24420 | 50.185 | 271 | 132 | 2 | 1 | 268 | 1 | 271 | 3.00e-104 | 304 |
| MS.gene03694.t1 | AT3G03990 | 38.697 | 261 | 159 | 1 | 5 | 265 | 3 | 262 | 8.24e-76 | 231 |
| MS.gene03694.t1 | AT4G37470 | 42.041 | 245 | 140 | 2 | 13 | 256 | 9 | 252 | 1.99e-71 | 221 |
Find 53 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTAATGCCCTATGCTTAT+TGG | 0.241237 | 3.4:+35899320 | None:intergenic |
| TGACATAAAACTATTGTTTC+GGG | 0.281340 | 3.4:+35900577 | None:intergenic |
| TACTTGGATGAGAACATTAA+AGG | 0.285814 | 3.4:-35899302 | MS.gene03694:CDS |
| ATGACATAAAACTATTGTTT+CGG | 0.322926 | 3.4:+35900576 | None:intergenic |
| TTGGAACAGACCAGTCTATA+TGG | 0.354404 | 3.4:-35900549 | MS.gene03694:CDS |
| TCAATAGAGTCAGCATCATT+TGG | 0.360021 | 3.4:+35899488 | None:intergenic |
| ACAGTCTAGTTCTGTTTGAT+TGG | 0.364702 | 3.4:-35900495 | MS.gene03694:CDS |
| TGATGAGTTAATCACTCTTA+TGG | 0.373825 | 3.4:-35900401 | MS.gene03694:CDS |
| TGAGGTGCTGAAGGGTATTG+TGG | 0.383521 | 3.4:-35899210 | MS.gene03694:CDS |
| AATAAGCATAGGGCATTACT+TGG | 0.397845 | 3.4:-35899318 | MS.gene03694:CDS |
| GCTTTCGTATTGAGACTCTA+TGG | 0.399369 | 3.4:+35899544 | None:intergenic |
| TCTGTAATAGCTCCAGAAAA+TGG | 0.417553 | 3.4:+35900472 | None:intergenic |
| TCATTTGGATCCACTGCAAT+AGG | 0.424577 | 3.4:+35899503 | None:intergenic |
| AAAAGCCTGAGCTCTTTAAG+AGG | 0.425563 | 3.4:-35900303 | MS.gene03694:CDS |
| TAGAGTCTCAATACGAAAGC+TGG | 0.436550 | 3.4:-35899541 | MS.gene03694:CDS |
| CTCATCAGCATAAGGTTCAT+AGG | 0.436848 | 3.4:+35900417 | None:intergenic |
| ACTTGGATGAGAACATTAAA+GGG | 0.437938 | 3.4:-35899301 | MS.gene03694:CDS |
| GAGGTGCTGAAGGGTATTGT+GGG | 0.441840 | 3.4:-35899209 | MS.gene03694:CDS |
| CTATAGAGATATAGTTGAAA+AGG | 0.445888 | 3.4:-35899390 | MS.gene03694:CDS |
| CATTAAAGGGATGTCTACTT+TGG | 0.446680 | 3.4:-35899288 | MS.gene03694:CDS |
| ATAAATACAGATGACTATAA+AGG | 0.458026 | 3.4:-35899605 | MS.gene03694:CDS |
| ACAATCCTCTTAAAGAGCTC+AGG | 0.466269 | 3.4:+35900298 | None:intergenic |
| TGTTTCGGGTCCTGAGCCTA+TGG | 0.470244 | 3.4:+35900591 | None:intergenic |
| CACTCTATGTCTGCTATGAT+AGG | 0.473029 | 3.4:-35900343 | MS.gene03694:CDS |
| TTCTTCTTTGTGCTTCCCCA+AGG | 0.483467 | 3.4:-35900276 | MS.gene03694:intron |
| GTGATTAACTCATCAGCATA+AGG | 0.495421 | 3.4:+35900409 | None:intergenic |
| AATCACTCTTATGGATGAGT+TGG | 0.497837 | 3.4:-35900392 | MS.gene03694:CDS |
| CAACAAAAGTGATACATTTG+AGG | 0.498332 | 3.4:+35900368 | None:intergenic |
| CTCAGTTAACTGCACACCTA+AGG | 0.500170 | 3.4:-35899238 | MS.gene03694:CDS |
| GTGCAGTTAACTGAGGGAAA+TGG | 0.509673 | 3.4:+35899246 | None:intergenic |
| TCAGCACCTCAACCAACCTT+AGG | 0.510018 | 3.4:+35899222 | None:intergenic |
| TTGGAGTTTATAGATATGAC+TGG | 0.515619 | 3.4:-35899269 | MS.gene03694:CDS |
| AAGGTTGGTTGAGGTGCTGA+AGG | 0.529671 | 3.4:-35899219 | MS.gene03694:CDS |
| AATGCAAGAACCATAGGCTC+AGG | 0.553052 | 3.4:-35900601 | MS.gene03694:CDS |
| GAAAGCTGGGTTTCAGCATA+CGG | 0.556562 | 3.4:-35899527 | MS.gene03694:CDS |
| TCTTTAAATGCAAGAACCAT+AGG | 0.556752 | 3.4:-35900607 | MS.gene03694:CDS |
| GTGGCAGTTCCAATAAGCAT+AGG | 0.560917 | 3.4:-35899329 | MS.gene03694:CDS |
| ACTTGACTGAATGATTGTGC+AGG | 0.563263 | 3.4:+35899358 | None:intergenic |
| AGCATACGGTCCTATTGCAG+TGG | 0.564652 | 3.4:-35899513 | MS.gene03694:CDS |
| TTGCATTTAAAGATGTTGAG+AGG | 0.576785 | 3.4:+35900617 | None:intergenic |
| AGAGTCTCAATACGAAAGCT+GGG | 0.578249 | 3.4:-35899540 | MS.gene03694:CDS |
| TGCACACCTAAGGTTGGTTG+AGG | 0.583937 | 3.4:-35899228 | MS.gene03694:CDS |
| TGGCAGTTCCAATAAGCATA+GGG | 0.586920 | 3.4:-35899328 | MS.gene03694:CDS |
| GTTAACTGCACACCTAAGGT+TGG | 0.590880 | 3.4:-35899234 | MS.gene03694:CDS |
| CTTGACTGAATGATTGTGCA+GGG | 0.604202 | 3.4:+35899359 | None:intergenic |
| AATACAGATGACTATAAAGG+AGG | 0.635005 | 3.4:-35899602 | MS.gene03694:CDS |
| CATTCAGTCAAGTAATGATG+TGG | 0.635222 | 3.4:-35899348 | MS.gene03694:CDS |
| TGGTGAAGTTGCAATTACCT+TGG | 0.640152 | 3.4:-35899435 | MS.gene03694:CDS |
| CTTAGGTGTGCAGTTAACTG+AGG | 0.642434 | 3.4:+35899239 | None:intergenic |
| AGGTTGGTTGAGGTGCTGAA+GGG | 0.645453 | 3.4:-35899218 | MS.gene03694:CDS |
| TTAGGTGTGCAGTTAACTGA+GGG | 0.650507 | 3.4:+35899240 | None:intergenic |
| AAATGCTTGAAAAGAATGGG+TGG | 0.686067 | 3.4:-35899455 | MS.gene03694:CDS |
| TTGACTGAATGATTGTGCAG+GGG | 0.705699 | 3.4:+35899360 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTTTTTAACTATGTTAT+TGG | - | chr3.4:35899942-35899961 | MS.gene03694:intron | 15.0% |
| !!! | TATATTTTGCATGATTATAA+AGG | + | chr3.4:35899402-35899421 | None:intergenic | 15.0% |
| !! | AATTAGTTATTGACAAAACT+CGG | + | chr3.4:35899981-35900000 | None:intergenic | 20.0% |
| !! | ACCTATGAATGAATAATTAT+GGG | + | chr3.4:35900215-35900234 | None:intergenic | 20.0% |
| !! | ATAAATACAGATGACTATAA+AGG | - | chr3.4:35900237-35900256 | MS.gene03694:intron | 20.0% |
| !! | ATGACATAAAACTATTGTTT+CGG | + | chr3.4:35899269-35899288 | None:intergenic | 20.0% |
| !! | TACCTATGAATGAATAATTA+TGG | + | chr3.4:35900216-35900235 | None:intergenic | 20.0% |
| !!! | AAACAATAGTTTTATGTCAT+GGG | - | chr3.4:35899269-35899288 | MS.gene03694:CDS | 20.0% |
| ! | ATTAGTTATTGACAAAACTC+GGG | + | chr3.4:35899980-35899999 | None:intergenic | 25.0% |
| ! | CAAAAATGCTTGAAAAGAAT+GGG | - | chr3.4:35900384-35900403 | MS.gene03694:CDS | 25.0% |
| ! | CTATAGAGATATAGTTGAAA+AGG | - | chr3.4:35900452-35900471 | MS.gene03694:CDS | 25.0% |
| ! | GAAATCTCATATTGTGTATT+TGG | - | chr3.4:35899715-35899734 | MS.gene03694:intron | 25.0% |
| ! | TCAAAAATGCTTGAAAAGAA+TGG | - | chr3.4:35900383-35900402 | MS.gene03694:CDS | 25.0% |
| ! | TCCCATAATTATTCATTCAT+AGG | - | chr3.4:35900211-35900230 | MS.gene03694:intron | 25.0% |
| ! | TGACATAAAACTATTGTTTC+GGG | + | chr3.4:35899268-35899287 | None:intergenic | 25.0% |
| ! | TGTTAAAACGCTTGATTATT+TGG | - | chr3.4:35899691-35899710 | MS.gene03694:intron | 25.0% |
| !! | AAACATTTGATGGTACAATA+TGG | - | chr3.4:35900161-35900180 | MS.gene03694:intron | 25.0% |
| !! | AACATTTGATGGTACAATAT+GGG | - | chr3.4:35900162-35900181 | MS.gene03694:intron | 25.0% |
| !! | CAATTTTATTCCATATAGAC+TGG | + | chr3.4:35899306-35899325 | None:intergenic | 25.0% |
| !! | CTGTAATTTTCAGTTAAAAG+AGG | + | chr3.4:35899331-35899350 | None:intergenic | 25.0% |
| !!! | GAAACAATAGTTTTATGTCA+TGG | - | chr3.4:35899268-35899287 | MS.gene03694:CDS | 25.0% |
| AATACAGATGACTATAAAGG+AGG | - | chr3.4:35900240-35900259 | MS.gene03694:intron | 30.0% | |
| ACTTGGATGAGAACATTAAA+GGG | - | chr3.4:35900541-35900560 | MS.gene03694:CDS | 30.0% | |
| CAACAAAAGTGATACATTTG+AGG | + | chr3.4:35899477-35899496 | None:intergenic | 30.0% | |
| GTACCATCAAATGTTTGAAT+TGG | + | chr3.4:35900157-35900176 | None:intergenic | 30.0% | |
| TACTTGGATGAGAACATTAA+AGG | - | chr3.4:35900540-35900559 | MS.gene03694:CDS | 30.0% | |
| TCTTTAAATGCAAGAACCAT+AGG | - | chr3.4:35899235-35899254 | MS.gene03694:CDS | 30.0% | |
| TGATGAGTTAATCACTCTTA+TGG | - | chr3.4:35899441-35899460 | MS.gene03694:CDS | 30.0% | |
| TTAGTTATTGACAAAACTCG+GGG | + | chr3.4:35899979-35899998 | None:intergenic | 30.0% | |
| TTGCATTTAAAGATGTTGAG+AGG | + | chr3.4:35899228-35899247 | None:intergenic | 30.0% | |
| TTGGAGTTTATAGATATGAC+TGG | - | chr3.4:35900573-35900592 | MS.gene03694:CDS | 30.0% | |
| ! | TTTTGTGGAAGGACAAAAAT+AGG | + | chr3.4:35900088-35900107 | None:intergenic | 30.0% |
| !! | CTCAAATGTATCACTTTTGT+TGG | - | chr3.4:35899475-35899494 | MS.gene03694:CDS | 30.0% |
| !!! | ATAGTTTTATGTCATGGGTT+TGG | - | chr3.4:35899274-35899293 | MS.gene03694:CDS | 30.0% |
| !!! | GTTTAGCATTTCTAGTTTTG+TGG | + | chr3.4:35900103-35900122 | None:intergenic | 30.0% |
| AAATGCTTGAAAAGAATGGG+TGG | - | chr3.4:35900387-35900406 | MS.gene03694:CDS | 35.0% | |
| AAGTAATGCCCTATGCTTAT+TGG | + | chr3.4:35900525-35900544 | None:intergenic | 35.0% | |
| AATCACTCTTATGGATGAGT+TGG | - | chr3.4:35899450-35899469 | MS.gene03694:CDS | 35.0% | |
| AGGCCAATTCAAACATTTGA+TGG | - | chr3.4:35900151-35900170 | MS.gene03694:intron | 35.0% | |
| CATTAAAGGGATGTCTACTT+TGG | - | chr3.4:35900554-35900573 | MS.gene03694:CDS | 35.0% | |
| CATTCAGTCAAGTAATGATG+TGG | - | chr3.4:35900494-35900513 | MS.gene03694:CDS | 35.0% | |
| GAAAAACATAGATGTGAGAG+AGG | + | chr3.4:35900040-35900059 | None:intergenic | 35.0% | |
| GTGATTAACTCATCAGCATA+AGG | + | chr3.4:35899436-35899455 | None:intergenic | 35.0% | |
| TAGTTATTGACAAAACTCGG+GGG | + | chr3.4:35899978-35899997 | None:intergenic | 35.0% | |
| TCAATAGAGTCAGCATCATT+TGG | + | chr3.4:35900357-35900376 | None:intergenic | 35.0% | |
| TCTGTAATAGCTCCAGAAAA+TGG | + | chr3.4:35899373-35899392 | None:intergenic | 35.0% | |
| ! | AAAGAGCTCAGGCTTTTTAA+TGG | + | chr3.4:35899536-35899555 | None:intergenic | 35.0% |
| ! | AATAAGCATAGGGCATTACT+TGG | - | chr3.4:35900524-35900543 | MS.gene03694:CDS | 35.0% |
| ! | ACATCAGAGAGAGTATATGT+AGG | + | chr3.4:35899606-35899625 | None:intergenic | 35.0% |
| ! | ATTTGATGGTACAATATGGG+TGG | - | chr3.4:35900165-35900184 | MS.gene03694:intron | 35.0% |
| ! | GTCACTGAAAAACACAGTTT+TGG | + | chr3.4:35900433-35900452 | None:intergenic | 35.0% |
| ! | TCAAATGTTTGAATTGGCCT+AGG | + | chr3.4:35900151-35900170 | None:intergenic | 35.0% |
| !! | ACAGTCTAGTTCTGTTTGAT+TGG | - | chr3.4:35899347-35899366 | MS.gene03694:CDS | 35.0% |
| !!! | AGCATTTCTAGTTTTGTGGA+AGG | + | chr3.4:35900099-35900118 | None:intergenic | 35.0% |
| !!! | TCACTTTTTTTTCCTAGCCT+AGG | - | chr3.4:35900131-35900150 | MS.gene03694:intron | 35.0% |
| AAAAGCCTGAGCTCTTTAAG+AGG | - | chr3.4:35899539-35899558 | MS.gene03694:CDS | 40.0% | |
| ACAATCCTCTTAAAGAGCTC+AGG | + | chr3.4:35899547-35899566 | None:intergenic | 40.0% | |
| ACTTGACTGAATGATTGTGC+AGG | + | chr3.4:35900487-35900506 | None:intergenic | 40.0% | |
| AGAGTCTCAATACGAAAGCT+GGG | - | chr3.4:35900302-35900321 | MS.gene03694:CDS | 40.0% | |
| CACTCTATGTCTGCTATGAT+AGG | - | chr3.4:35899499-35899518 | MS.gene03694:CDS | 40.0% | |
| CATGTGTTACCGACATATGT+CGG | - | chr3.4:35899846-35899865 | MS.gene03694:intron | 40.0% | |
| CTCATCAGCATAAGGTTCAT+AGG | + | chr3.4:35899428-35899447 | None:intergenic | 40.0% | |
| CTTGACTGAATGATTGTGCA+GGG | + | chr3.4:35900486-35900505 | None:intergenic | 40.0% | |
| GCTTTCGTATTGAGACTCTA+TGG | + | chr3.4:35900301-35900320 | None:intergenic | 40.0% | |
| GTGCACTTCTTTATGTGTTG+TGG | + | chr3.4:35900066-35900085 | None:intergenic | 40.0% | |
| TAGAGTCTCAATACGAAAGC+TGG | - | chr3.4:35900301-35900320 | MS.gene03694:CDS | 40.0% | |
| TAGTGTCAACGTGTTAGTGA+CGG | + | chr3.4:35899783-35899802 | None:intergenic | 40.0% | |
| TCATTTGGATCCACTGCAAT+AGG | + | chr3.4:35900342-35900361 | None:intergenic | 40.0% | |
| TGGCAGTTCCAATAAGCATA+GGG | - | chr3.4:35900514-35900533 | MS.gene03694:CDS | 40.0% | |
| TGGTGAAGTTGCAATTACCT+TGG | - | chr3.4:35900407-35900426 | MS.gene03694:CDS | 40.0% | |
| TTAGGTGTGCAGTTAACTGA+GGG | + | chr3.4:35900605-35900624 | None:intergenic | 40.0% | |
| TTGACTGAATGATTGTGCAG+GGG | + | chr3.4:35900485-35900504 | None:intergenic | 40.0% | |
| TTGGAACAGACCAGTCTATA+TGG | - | chr3.4:35899293-35899312 | MS.gene03694:CDS | 40.0% | |
| ! | GAGAGAGGCTACTTTAAAGA+TGG | + | chr3.4:35900025-35900044 | None:intergenic | 40.0% |
| !! | AGGTAAAGATGAGAGTACCT+TGG | + | chr3.4:35899586-35899605 | None:intergenic | 40.0% |
| !! | CTGTTTGATTGGCCATTTTC+TGG | - | chr3.4:35899358-35899377 | MS.gene03694:CDS | 40.0% |
| !! | GAAAAACACAGTTTTGGCCA+AGG | + | chr3.4:35900427-35900446 | None:intergenic | 40.0% |
| !! | GGTAAAGATGAGAGTACCTT+GGG | + | chr3.4:35899585-35899604 | None:intergenic | 40.0% |
| !! | GTAAAGATGAGAGTACCTTG+GGG | + | chr3.4:35899584-35899603 | None:intergenic | 40.0% |
| !!! | GATGTTGAGAGGCTCTTTTT+TGG | + | chr3.4:35899217-35899236 | None:intergenic | 40.0% |
| AATGCAAGAACCATAGGCTC+AGG | - | chr3.4:35899241-35899260 | MS.gene03694:CDS | 45.0% | |
| CTCAGTTAACTGCACACCTA+AGG | - | chr3.4:35900604-35900623 | MS.gene03694:CDS | 45.0% | |
| CTTAGGTGTGCAGTTAACTG+AGG | + | chr3.4:35900606-35900625 | None:intergenic | 45.0% | |
| GAAAGCTGGGTTTCAGCATA+CGG | - | chr3.4:35900315-35900334 | MS.gene03694:CDS | 45.0% | |
| GTCTGATGTCCGACATATGT+CGG | + | chr3.4:35899858-35899877 | None:intergenic | 45.0% | |
| GTGCAGTTAACTGAGGGAAA+TGG | + | chr3.4:35900599-35900618 | None:intergenic | 45.0% | |
| GTGGCAGTTCCAATAAGCAT+AGG | - | chr3.4:35900513-35900532 | MS.gene03694:CDS | 45.0% | |
| GTTAACTGCACACCTAAGGT+TGG | - | chr3.4:35900608-35900627 | MS.gene03694:CDS | 45.0% | |
| TTCTTCTTTGTGCTTCCCCA+AGG | - | chr3.4:35899566-35899585 | MS.gene03694:CDS | 45.0% | |
| ! | ACGCTTTCCATCAGAAGTGT+CGG | - | chr3.4:35899878-35899897 | MS.gene03694:intron | 45.0% |
| ! | GAGCTCAGGCTTTTTAATGG+AGG | + | chr3.4:35899533-35899552 | None:intergenic | 45.0% |
| ! | TGTTTGAATTGGCCTAGGCT+AGG | + | chr3.4:35900146-35900165 | None:intergenic | 45.0% |
| !! | GTGTCGGTGCTACAAAGATT+TGG | - | chr3.4:35899894-35899913 | MS.gene03694:intron | 45.0% |
| AGCATACGGTCCTATTGCAG+TGG | - | chr3.4:35900329-35900348 | MS.gene03694:CDS | 50.0% | |
| TCAGCACCTCAACCAACCTT+AGG | + | chr3.4:35900623-35900642 | None:intergenic | 50.0% | |
| ! | TGCACACCTAAGGTTGGTTG+AGG | - | chr3.4:35900614-35900633 | MS.gene03694:CDS | 50.0% |
| !! | AAGGTTGGTTGAGGTGCTGA+AGG | - | chr3.4:35900623-35900642 | MS.gene03694:CDS | 50.0% |
| !! | AGGTTGGTTGAGGTGCTGAA+GGG | - | chr3.4:35900624-35900643 | MS.gene03694:CDS | 50.0% |
| !! | GAGGTGCTGAAGGGTATTGT+GGG | - | chr3.4:35900633-35900652 | MS.gene03694:CDS | 50.0% |
| !! | TGAGGTGCTGAAGGGTATTG+TGG | - | chr3.4:35900632-35900651 | MS.gene03694:CDS | 50.0% |
| !! | TGTAGCACCGACACTTCTGA+TGG | + | chr3.4:35899888-35899907 | None:intergenic | 50.0% |
| ! | TGTTTCGGGTCCTGAGCCTA+TGG | + | chr3.4:35899254-35899273 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 35899205 | 35900659 | 35899205 | ID=MS.gene03694 |
| chr3.4 | mRNA | 35899205 | 35900659 | 35899205 | ID=MS.gene03694.t1;Parent=MS.gene03694 |
| chr3.4 | exon | 35900277 | 35900659 | 35900277 | ID=MS.gene03694.t1.exon1;Parent=MS.gene03694.t1 |
| chr3.4 | CDS | 35900277 | 35900659 | 35900277 | ID=cds.MS.gene03694.t1;Parent=MS.gene03694.t1 |
| chr3.4 | exon | 35899205 | 35899631 | 35899205 | ID=MS.gene03694.t1.exon2;Parent=MS.gene03694.t1 |
| chr3.4 | CDS | 35899205 | 35899631 | 35899205 | ID=cds.MS.gene03694.t1;Parent=MS.gene03694.t1 |
| Gene Sequence |
| Protein sequence |
