Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037191.t1 | XP_013463548.1 | 97.9 | 870 | 17 | 1 | 1 | 869 | 1 | 870 | 0.00E+00 | 1751.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037191.t1 | Q3UDE2 | 36.4 | 517 | 264 | 14 | 390 | 873 | 153 | 637 | 1.3e-85 | 319.3 |
| MS.gene037191.t1 | Q3UDE2 | 41.1 | 124 | 49 | 4 | 15 | 114 | 24 | 147 | 1.7e-16 | 89.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037191.t1 | A0A072V887 | 97.9 | 870 | 17 | 1 | 1 | 869 | 1 | 870 | 0.0e+00 | 1751.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037191 | MS.gene75567 | PPI |
| MS.gene037191 | MS.gene79126 | PPI |
| MS.gene037191 | MS.gene045227 | PPI |
| MS.gene037191 | MS.gene067039 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037191.t1 | MTR_2g041640 | 97.931 | 870 | 17 | 1 | 1 | 869 | 1 | 870 | 0.0 | 1767 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037191.t1 | AT1G77550 | 67.480 | 861 | 268 | 5 | 10 | 869 | 3 | 852 | 0.0 | 1197 |
Find 211 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCACTTTCCAATATTT+TGG | 0.092480 | 2.3:+48255233 | None:intergenic |
| CATATTATATCTGCATCTTT+TGG | 0.139160 | 2.3:+48252463 | None:intergenic |
| TATTCCTGTCAGATTGTTTC+TGG | 0.155637 | 2.3:-48251747 | MS.gene037191:CDS |
| CAATTTCGGGGAGTGGGCTT+TGG | 0.216553 | 2.3:-48255978 | MS.gene037191:CDS |
| CAACTTTCACAAGCAATTTC+GGG | 0.220240 | 2.3:-48255991 | MS.gene037191:CDS |
| CACATGATGGGCGTCCTTTA+CGG | 0.233516 | 2.3:-48254036 | MS.gene037191:CDS |
| TCAACTTTCACAAGCAATTT+CGG | 0.237496 | 2.3:-48255992 | MS.gene037191:CDS |
| TATGATTCGATCGGTGTTTC+AGG | 0.240319 | 2.3:-48251250 | MS.gene037191:CDS |
| ACTCATCTGTCTCAACTTAT+TGG | 0.250244 | 2.3:-48252003 | MS.gene037191:CDS |
| CCAAACATTTCTGAACTAAA+TGG | 0.271808 | 2.3:-48255267 | MS.gene037191:CDS |
| AGTTTCCATGAGTCGGATTA+TGG | 0.278974 | 2.3:+48251876 | None:intergenic |
| TGCACTCGTGACTTTCTTCT+TGG | 0.281535 | 2.3:-48254311 | MS.gene037191:CDS |
| ATTCTCTTGCTTACGTTCAT+TGG | 0.283449 | 2.3:-48255470 | MS.gene037191:CDS |
| GGGAAGTGCCATTGACATTC+TGG | 0.284815 | 2.3:-48255298 | MS.gene037191:CDS |
| CTGTATCTCTTGCAGTTAAA+TGG | 0.290895 | 2.3:-48251299 | MS.gene037191:intron |
| TTAGTGGCACTTAGCCTATA+TGG | 0.294517 | 2.3:-48256264 | MS.gene037191:CDS |
| AGGTACGTGATGGATGAATT+TGG | 0.296880 | 2.3:-48254778 | MS.gene037191:CDS |
| GTCGATATTCCTGGTCCTCT+TGG | 0.300317 | 2.3:-48255321 | MS.gene037191:CDS |
| GGAATTCTACTCGCCGCTTC+AGG | 0.302882 | 2.3:-48257968 | MS.gene037191:CDS |
| CAGGTTGTTCAATATACTTC+TGG | 0.310081 | 2.3:+48251839 | None:intergenic |
| TATTTGTGCATCCAAAATAT+TGG | 0.310689 | 2.3:-48255244 | MS.gene037191:CDS |
| ACTTCTTGAATAATCAATTC+AGG | 0.312500 | 2.3:+48256225 | None:intergenic |
| CAAAAGATGCAGATATAATA+TGG | 0.314062 | 2.3:-48252462 | MS.gene037191:CDS |
| AGCTAACAACCAATATTCTT+TGG | 0.314596 | 2.3:-48251630 | MS.gene037191:CDS |
| CGTGACTTTCTTCTTGGTAT+TGG | 0.317812 | 2.3:-48254305 | MS.gene037191:CDS |
| TGAAACTCATTTCACTGTTA+TGG | 0.319368 | 2.3:-48251585 | MS.gene037191:intron |
| TGATGATATGTTTCTTTCAT+TGG | 0.319684 | 2.3:-48256959 | MS.gene037191:CDS |
| AATAGTGCGGGCCATGTTCC+AGG | 0.320213 | 2.3:+48251927 | None:intergenic |
| AATTTCGGGGAGTGGGCTTT+GGG | 0.325758 | 2.3:-48255977 | MS.gene037191:CDS |
| TCAGCTTGATCAGCATTAGA+TGG | 0.330080 | 2.3:+48255923 | None:intergenic |
| ACTTGGATAAAATAGTTCTC+TGG | 0.333720 | 2.3:+48254236 | None:intergenic |
| AATAAATCACAAGAATATTA+AGG | 0.336524 | 2.3:-48251450 | MS.gene037191:CDS |
| TCGATATTCCTGGTCCTCTT+GGG | 0.347686 | 2.3:-48255320 | MS.gene037191:CDS |
| TATGGCCAACACGGAATGTT+TGG | 0.355349 | 2.3:-48254346 | MS.gene037191:CDS |
| ACTTACAAATTCTGAAGAAC+TGG | 0.358020 | 2.3:+48256159 | None:intergenic |
| TCTTAAGGAGTTACCAGAAC+TGG | 0.362100 | 2.3:-48256026 | MS.gene037191:CDS |
| ACATGATGGGCGTCCTTTAC+GGG | 0.362567 | 2.3:-48254035 | MS.gene037191:CDS |
| CTTTCCTTCTCAGAATTTAG+TGG | 0.365312 | 2.3:-48256280 | MS.gene037191:intron |
| AAGTTATACATCTAATTTCC+AGG | 0.366200 | 2.3:+48250755 | None:intergenic |
| TCTAGTGATGGTGATCTTGC+AGG | 0.366268 | 2.3:-48256055 | MS.gene037191:intron |
| AGACGGCGGTGGAGGGATTC+CGG | 0.366662 | 2.3:+48257941 | None:intergenic |
| TTGTAAGCTTGTTTCCATAT+AGG | 0.366689 | 2.3:+48256250 | None:intergenic |
| GGCTCATCAGGAGTCCATTC+AGG | 0.370563 | 2.3:+48255177 | None:intergenic |
| TCTTGCAGGTATTATTCTTA+AGG | 0.373169 | 2.3:-48256041 | MS.gene037191:CDS |
| GGACTTGCCTGCAAGATTCC+CGG | 0.375915 | 2.3:-48256938 | MS.gene037191:intron |
| GATGTGTGTGGATATTGATT+TGG | 0.375921 | 2.3:-48257130 | MS.gene037191:CDS |
| GTTGAAGAAATCACAACCTT+TGG | 0.377369 | 2.3:+48250907 | None:intergenic |
| AAAGGTGCCACTCTAAAGTT+TGG | 0.383885 | 2.3:+48254730 | None:intergenic |
| TGAACAACCTGCTTTATTCC+AGG | 0.384791 | 2.3:-48251827 | MS.gene037191:CDS |
| TTGCAAGCTCGTGTACAATC+AGG | 0.394641 | 2.3:+48250968 | None:intergenic |
| GAAGACTTCGCCAAAGTTCA+CGG | 0.397878 | 2.3:-48257989 | MS.gene037191:CDS |
| TTCTTCCTCGCCTTCCTGAA+TGG | 0.401426 | 2.3:-48255191 | MS.gene037191:CDS |
| CATTAATCAATTTCCATTTG+AGG | 0.403628 | 2.3:-48252380 | MS.gene037191:CDS |
| GAATTATAAATCTCCAGTTC+TGG | 0.404024 | 2.3:+48256013 | None:intergenic |
| ACTCGCCGCTTCAGGATTAC+CGG | 0.406444 | 2.3:-48257960 | MS.gene037191:CDS |
| TAGAAGGACTAGACAACCTT+TGG | 0.406467 | 2.3:-48251960 | MS.gene037191:CDS |
| CTTTCGTACTTGAACATTCG+TGG | 0.406787 | 2.3:-48255544 | MS.gene037191:CDS |
| CGGTCATGAATAGGCTCATC+AGG | 0.408012 | 2.3:+48255165 | None:intergenic |
| CCAACATCAAGGGCAATTTA+CGG | 0.409401 | 2.3:-48251195 | MS.gene037191:CDS |
| CCATTTAGTTCAGAAATGTT+TGG | 0.413238 | 2.3:+48255267 | None:intergenic |
| TTACGGACCGGGAATCTTGC+AGG | 0.414039 | 2.3:+48256931 | None:intergenic |
| GCCACATTGCACTTATAATA+CGG | 0.416942 | 2.3:+48255145 | None:intergenic |
| TTGAGGTGGTTGGAGCTTGA+TGG | 0.417086 | 2.3:-48256994 | MS.gene037191:CDS |
| GGTTCGGAGTATGCACCCTT+TGG | 0.419754 | 2.3:-48251773 | MS.gene037191:CDS |
| CTCTCAGAGGACTGCACAGT+GGG | 0.420225 | 2.3:+48254073 | None:intergenic |
| ATAATCCGACTCATGGAAAC+TGG | 0.425940 | 2.3:-48251874 | MS.gene037191:CDS |
| CTTATAATACGGTCATGAAT+AGG | 0.427782 | 2.3:+48255156 | None:intergenic |
| ATGAATTTGGTTCTGCTTTG+CGG | 0.431191 | 2.3:-48254765 | MS.gene037191:CDS |
| CTCTTGCTTACGTTCATTGG+AGG | 0.433275 | 2.3:-48255467 | MS.gene037191:intron |
| CGAAAGGGATGGCAAACAAA+TGG | 0.435231 | 2.3:+48255561 | None:intergenic |
| CTTGGATAAAATAGTTCTCT+GGG | 0.435795 | 2.3:+48254237 | None:intergenic |
| TCTTCCTCGTTGATCATGCT+TGG | 0.437053 | 2.3:-48257796 | MS.gene037191:CDS |
| AGTTAGTGTTGTAGAAATGT+TGG | 0.445277 | 2.3:-48257058 | MS.gene037191:CDS |
| GTAACTGAGCTTTGCTCCAA+TGG | 0.447485 | 2.3:+48255517 | None:intergenic |
| CACAAGCAATTTCGGGGAGT+GGG | 0.449915 | 2.3:-48255984 | MS.gene037191:CDS |
| GCTGCGTGAAGTTCCGGGAT+TGG | 0.452297 | 2.3:-48257172 | MS.gene037191:CDS |
| TATGACATGGATATCGTTGT+TGG | 0.452356 | 2.3:-48250944 | MS.gene037191:CDS |
| TGATCTCCGTTATGTAGTAC+TGG | 0.455881 | 2.3:-48251794 | MS.gene037191:CDS |
| AGGTTTCAGTGGAGAGTTTG+TGG | 0.462262 | 2.3:+48257915 | None:intergenic |
| GATGTTGGACTATGCATCTC+AGG | 0.462658 | 2.3:+48251210 | None:intergenic |
| TTTAGCAGAAACAATTCAAA+AGG | 0.464036 | 2.3:-48252335 | MS.gene037191:intron |
| TTACCAACCTCTAGTAACTT+AGG | 0.465893 | 2.3:+48251141 | None:intergenic |
| ATGACAAGACAAGCCTCAAA+TGG | 0.465912 | 2.3:+48252367 | None:intergenic |
| TATTATGTACGCAAAATAGA+AGG | 0.466057 | 2.3:-48251976 | MS.gene037191:CDS |
| ACTCTCCGACGCTTACAAAC+AGG | 0.466139 | 2.3:-48257765 | MS.gene037191:intron |
| TATCTTCGCAAGGTTCGATC+TGG | 0.469087 | 2.3:+48257873 | None:intergenic |
| ATTCCTGTCAGATTGTTTCT+GGG | 0.469381 | 2.3:-48251746 | MS.gene037191:intron |
| CCCTCTGGCATGAAAAGAAA+AGG | 0.470377 | 2.3:+48254712 | None:intergenic |
| TCCGTTATGTAGTACTGGTT+CGG | 0.471117 | 2.3:-48251789 | MS.gene037191:CDS |
| GTTCGAGAGGTGAAAGAGAA+AGG | 0.471606 | 2.3:-48257027 | MS.gene037191:CDS |
| TTTATCTTGCTTCAGGCACA+TGG | 0.472517 | 2.3:-48252063 | MS.gene037191:intron |
| TGTGGAAGAGACGGCGGTGG+AGG | 0.472903 | 2.3:+48257933 | None:intergenic |
| CACAGTGGGTGGTATTAAAC+TGG | 0.473738 | 2.3:+48254087 | None:intergenic |
| TCCGGGATTGGCAGAGAGGA+TGG | 0.477944 | 2.3:-48257160 | MS.gene037191:CDS |
| ATTGAACCAAGCAGTAAGTC+TGG | 0.478752 | 2.3:+48254262 | None:intergenic |
| ATCTCTTGCAGTTAAATGGT+TGG | 0.478877 | 2.3:-48251295 | MS.gene037191:intron |
| TCACAAGCAATTTCGGGGAG+TGG | 0.481347 | 2.3:-48255985 | MS.gene037191:CDS |
| CCCATCCTCTCTGCCAATCC+CGG | 0.482424 | 2.3:+48257159 | None:intergenic |
| TGGATATACATGCAAGAGTA+AGG | 0.489710 | 2.3:-48251275 | MS.gene037191:CDS |
| TATAATATGGACCTGCGTAC+AGG | 0.490503 | 2.3:-48252449 | MS.gene037191:CDS |
| CAACCTCTAGTAACTTAGGT+TGG | 0.493695 | 2.3:+48251145 | None:intergenic |
| CCGTAAATTGCCCTTGATGT+TGG | 0.495083 | 2.3:+48251195 | None:intergenic |
| CGATATTCCTGGTCCTCTTG+GGG | 0.503309 | 2.3:-48255319 | MS.gene037191:CDS |
| GAAATGCTCGCCGCCGTCGA+AGG | 0.504521 | 2.3:+48257895 | None:intergenic |
| GAACATTCGTGGAAATCCAT+TGG | 0.506538 | 2.3:-48255533 | MS.gene037191:CDS |
| GAGTAGAATTCCGTGAACTT+TGG | 0.507996 | 2.3:+48257979 | None:intergenic |
| AGAAGTATTCGCCCACATGA+TGG | 0.518087 | 2.3:-48254049 | MS.gene037191:CDS |
| AGGCACATGGATCTCCTCAA+TGG | 0.518425 | 2.3:-48252050 | MS.gene037191:CDS |
| TTGGACCAGTTTCCATGAGT+CGG | 0.519542 | 2.3:+48251869 | None:intergenic |
| TCCATGAGTCGGATTATGGC+TGG | 0.520674 | 2.3:+48251880 | None:intergenic |
| GAAAGGGATGGCAAACAAAT+GGG | 0.527047 | 2.3:+48255562 | None:intergenic |
| TGAGTTTCAAGATTATAAGT+AGG | 0.529055 | 2.3:+48252021 | None:intergenic |
| CCTTTCCAAACATTCCGTGT+TGG | 0.533360 | 2.3:+48254341 | None:intergenic |
| TACAGTAGTATCAATAGTGC+GGG | 0.533708 | 2.3:+48251915 | None:intergenic |
| ATCAAATTTAAACATCTCAA+AGG | 0.534502 | 2.3:-48256201 | MS.gene037191:CDS |
| GCCGATGCTAGATTGCCCTC+TGG | 0.535309 | 2.3:+48254697 | None:intergenic |
| ACCTTTGGATCTTAAAACCC+TGG | 0.538572 | 2.3:-48251945 | MS.gene037191:CDS |
| GAAGTATTCGCCCACATGAT+GGG | 0.539104 | 2.3:-48254048 | MS.gene037191:CDS |
| TGTAGAAATGTTGGAGAGTG+AGG | 0.539327 | 2.3:-48257049 | MS.gene037191:CDS |
| AGTTAGACGAAACCTCTGTA+TGG | 0.539543 | 2.3:-48255086 | MS.gene037191:intron |
| TTAAACATCTCAAAGGACTC+TGG | 0.541086 | 2.3:-48256194 | MS.gene037191:CDS |
| CACGAATGTTCAAGTACGAA+AGG | 0.541790 | 2.3:+48255545 | None:intergenic |
| GAACAACCTGCTTTATTCCA+GGG | 0.542789 | 2.3:-48251826 | MS.gene037191:CDS |
| ATGGATATCGTTGTTGGAGA+AGG | 0.543040 | 2.3:-48250938 | MS.gene037191:CDS |
| GGATAATTCTAGGTACGTGA+TGG | 0.545152 | 2.3:-48254788 | MS.gene037191:intron |
| AGAAGAAGAAATGGTAGCAA+TGG | 0.546649 | 2.3:-48258041 | None:intergenic |
| CAGCTTGATCAGCATTAGAT+GGG | 0.548839 | 2.3:+48255924 | None:intergenic |
| TGCAAGCTCGTGTACAATCA+GGG | 0.549178 | 2.3:+48250969 | None:intergenic |
| GCATCCAAAATATTGGAAAG+TGG | 0.551382 | 2.3:-48255237 | MS.gene037191:CDS |
| GTTTGTGGAAGAGACGGCGG+TGG | 0.553090 | 2.3:+48257930 | None:intergenic |
| CGTAAAGGACGCCCATCATG+TGG | 0.553316 | 2.3:+48254037 | None:intergenic |
| GTTGGAGAGTGAGGTTCGAG+AGG | 0.553772 | 2.3:-48257040 | MS.gene037191:CDS |
| TCCACTGAAACCTTCGACGG+CGG | 0.554667 | 2.3:-48257905 | MS.gene037191:CDS |
| ATATCTGTGTATACCCGTAA+AGG | 0.555996 | 2.3:+48254022 | None:intergenic |
| AACTTTGGCGAAGTCTTCGA+AGG | 0.557163 | 2.3:+48257994 | None:intergenic |
| CCGGGATTGGCAGAGAGGAT+GGG | 0.560887 | 2.3:-48257159 | MS.gene037191:CDS |
| GTTCTGCCAGACTTACTGCT+TGG | 0.561878 | 2.3:-48254268 | MS.gene037191:CDS |
| AAGAGATTCCAGAATGTCAA+TGG | 0.562794 | 2.3:+48255290 | None:intergenic |
| GATCTTAAAACCCTGGAACA+TGG | 0.564811 | 2.3:-48251938 | MS.gene037191:CDS |
| CTCATGCGATTATCTTCGCA+AGG | 0.564935 | 2.3:+48257863 | None:intergenic |
| ATCGGTGTTTCAGGCAGCTG+CGG | 0.566183 | 2.3:-48251241 | MS.gene037191:CDS |
| TTGGACCTGTTTGTAAGCGT+CGG | 0.569827 | 2.3:+48257760 | None:intergenic |
| TGTGTGGATATTGATTTGGA+TGG | 0.570847 | 2.3:-48257126 | MS.gene037191:CDS |
| ACCAGCCATAATCCGACTCA+TGG | 0.571309 | 2.3:-48251881 | MS.gene037191:CDS |
| TGATGGTACATTGAGGTGGT+TGG | 0.580792 | 2.3:-48257004 | MS.gene037191:CDS |
| ATACCCAGAAACAATCTGAC+AGG | 0.581860 | 2.3:+48251743 | None:intergenic |
| AGATGCATAGTCCAACATCA+AGG | 0.583143 | 2.3:-48251206 | MS.gene037191:CDS |
| ACGAATGTTCAAGTACGAAA+GGG | 0.584367 | 2.3:+48255546 | None:intergenic |
| GTGGAAGAGACGGCGGTGGA+GGG | 0.585364 | 2.3:+48257934 | None:intergenic |
| TGGAGAGTTTGTGGAAGAGA+CGG | 0.585650 | 2.3:+48257924 | None:intergenic |
| GGTTGATGAGGAGTTGAAGA+AGG | 0.587491 | 2.3:-48252428 | MS.gene037191:CDS |
| AACAACCTGCTTTATTCCAG+GGG | 0.587507 | 2.3:-48251825 | MS.gene037191:CDS |
| TTTCCAACCTAAGTTACTAG+AGG | 0.588700 | 2.3:-48251148 | MS.gene037191:intron |
| GAGGAGTTGAAGAAGGCCAC+GGG | 0.591379 | 2.3:-48252421 | MS.gene037191:CDS |
| TTGCGCAGAGATATATGGAA+AGG | 0.594711 | 2.3:-48255951 | MS.gene037191:CDS |
| CCGACTTGTTAGAGCTGCTG+AGG | 0.595289 | 2.3:-48255495 | MS.gene037191:CDS |
| GCCAGAGGGCAATCTAGCAT+CGG | 0.598031 | 2.3:-48254698 | MS.gene037191:CDS |
| TGAGGAGTTGAAGAAGGCCA+CGG | 0.599213 | 2.3:-48252422 | MS.gene037191:CDS |
| GGAGAAGGAGGTATTGCCAA+AGG | 0.601959 | 2.3:-48250923 | MS.gene037191:CDS |
| GCCGCCGTCGAAGGTTTCAG+TGG | 0.605694 | 2.3:+48257904 | None:intergenic |
| TTGCTGATCTGTTATTCCCG+TGG | 0.606174 | 2.3:+48252405 | None:intergenic |
| CACTTACTGATTGCAAACTC+AGG | 0.606354 | 2.3:+48253971 | None:intergenic |
| AACTTTCACAAGCAATTTCG+GGG | 0.606957 | 2.3:-48255990 | MS.gene037191:CDS |
| TTTCTATTCTATGGCCAACA+CGG | 0.607111 | 2.3:-48254355 | MS.gene037191:CDS |
| ATAGTGCGGGCCATGTTCCA+GGG | 0.608612 | 2.3:+48251928 | None:intergenic |
| CTGACAGGAATATCTCCAAA+GGG | 0.611128 | 2.3:+48251758 | None:intergenic |
| TCTGACAGGAATATCTCCAA+AGG | 0.611646 | 2.3:+48251757 | None:intergenic |
| GGAGTCCATTCAGGAAGGCG+AGG | 0.613302 | 2.3:+48255186 | None:intergenic |
| ATGATCAACGAGGAAGACAT+TGG | 0.615083 | 2.3:+48257802 | None:intergenic |
| TCCGAACCAGTACTACATAA+CGG | 0.615865 | 2.3:+48251788 | None:intergenic |
| GAGGTGAAAGAGAAAGGTGA+TGG | 0.616261 | 2.3:-48257021 | MS.gene037191:CDS |
| GATGGTGAAACTGAGGTGAA+TGG | 0.618839 | 2.3:-48257108 | MS.gene037191:CDS |
| GATATCGTTGTTGGAGAAGG+AGG | 0.622037 | 2.3:-48250935 | MS.gene037191:CDS |
| AGTAAGGACTATGATTCGAT+CGG | 0.623174 | 2.3:-48251259 | MS.gene037191:CDS |
| GCTCTCAGAGGACTGCACAG+TGG | 0.626388 | 2.3:+48254072 | None:intergenic |
| CATTCACAATCTGATCAACA+AGG | 0.628020 | 2.3:-48255855 | MS.gene037191:intron |
| GATGGGTTCTTTGATGTGTG+TGG | 0.629001 | 2.3:-48257142 | MS.gene037191:CDS |
| GATGCATAGTCCAACATCAA+GGG | 0.630418 | 2.3:-48251205 | MS.gene037191:CDS |
| CTCCTCATCAACCTGTACGC+AGG | 0.634177 | 2.3:+48252438 | None:intergenic |
| CCAACACGGAATGTTTGGAA+AGG | 0.635916 | 2.3:-48254341 | MS.gene037191:CDS |
| ATGTTCAAGTACGAAAGGGA+TGG | 0.635997 | 2.3:+48255550 | None:intergenic |
| GCATGTTCTCAGAATTATCG+TGG | 0.636330 | 2.3:-48251476 | MS.gene037191:intron |
| TCAGAGGACTGCACAGTGGG+TGG | 0.639769 | 2.3:+48254076 | None:intergenic |
| GTCAAGTACTCTTCCACGTG+AGG | 0.644264 | 2.3:+48253998 | None:intergenic |
| AAGTTCCGGGATTGGCAGAG+AGG | 0.644963 | 2.3:-48257164 | MS.gene037191:CDS |
| AGTGGGTGGTATTAAACTGG+TGG | 0.645039 | 2.3:+48254090 | None:intergenic |
| GACCTGCGTACAGGTTGATG+AGG | 0.645215 | 2.3:-48252440 | MS.gene037191:CDS |
| AGATTAGATACACTCAGCAG+TGG | 0.646587 | 2.3:+48255896 | None:intergenic |
| TTACAGTAGTATCAATAGTG+CGG | 0.648290 | 2.3:+48251914 | None:intergenic |
| GCAATCTAGCATCGGCTGTG+AGG | 0.649411 | 2.3:-48254690 | MS.gene037191:intron |
| GAATTTGAGGAAGAACATCA+AGG | 0.650482 | 2.3:-48251416 | MS.gene037191:intron |
| ACGAGCTTGCAAATATGACA+TGG | 0.651494 | 2.3:-48250957 | MS.gene037191:CDS |
| CCTCAGCAGCTCTAACAAGT+CGG | 0.652420 | 2.3:+48255495 | None:intergenic |
| AGAAAGGTGATGGTACATTG+AGG | 0.652450 | 2.3:-48257011 | MS.gene037191:CDS |
| CATCAGGAGTCCATTCAGGA+AGG | 0.654679 | 2.3:+48255181 | None:intergenic |
| GGATTCCGGTAATCCTGAAG+CGG | 0.656333 | 2.3:+48257955 | None:intergenic |
| GATATTCCTGGTCCTCTTGG+GGG | 0.661353 | 2.3:-48255318 | MS.gene037191:CDS |
| TGATTTGGATGGTGAAACTG+AGG | 0.665167 | 2.3:-48257115 | MS.gene037191:CDS |
| AAGGTGATGGTACATTGAGG+TGG | 0.674729 | 2.3:-48257008 | MS.gene037191:CDS |
| TAAGTAGGCTGCAACCATTG+AGG | 0.676253 | 2.3:+48252036 | None:intergenic |
| TGATGAGCCAAACTTTAGAG+TGG | 0.680214 | 2.3:-48254737 | MS.gene037191:CDS |
| CTCTCCACTGAAACCTTCGA+CGG | 0.683719 | 2.3:-48257908 | MS.gene037191:CDS |
| ATACACAGATATACCTCACG+TGG | 0.685643 | 2.3:-48254011 | MS.gene037191:CDS |
| GTAAAGGACGCCCATCATGT+GGG | 0.688444 | 2.3:+48254038 | None:intergenic |
| GCGAATACTTCTGCTCTCAG+AGG | 0.689727 | 2.3:+48254060 | None:intergenic |
| ATGAATGTCATACCATACAG+AGG | 0.704504 | 2.3:+48255074 | None:intergenic |
| TTGGATAAAATAGTTCTCTG+GGG | 0.706460 | 2.3:+48254238 | None:intergenic |
| AGAGTTTGTGGAAGAGACGG+CGG | 0.716886 | 2.3:+48257927 | None:intergenic |
| TAGAATCCGAAGTCAAAACG+AGG | 0.732532 | 2.3:+48257837 | None:intergenic |
| ACCGTATTATAAGTGCAATG+TGG | 0.733685 | 2.3:-48255146 | MS.gene037191:CDS |
| AAGTCCAAGCATGATCAACG+AGG | 0.739980 | 2.3:+48257792 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 48250766 | 48258053 | 48250766 | ID=MS.gene037191 |
| chr2.3 | mRNA | 48250766 | 48258053 | 48250766 | ID=MS.gene037191.t1;Parent=MS.gene037191 |
| chr2.3 | exon | 48257766 | 48258053 | 48257766 | ID=MS.gene037191.t1.exon1;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48257766 | 48258053 | 48257766 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48256939 | 48257193 | 48256939 | ID=MS.gene037191.t1.exon2;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48256939 | 48257193 | 48256939 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48256165 | 48256289 | 48256165 | ID=MS.gene037191.t1.exon3;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48256165 | 48256289 | 48256165 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48255856 | 48256072 | 48255856 | ID=MS.gene037191.t1.exon4;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48255856 | 48256072 | 48255856 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48255468 | 48255593 | 48255468 | ID=MS.gene037191.t1.exon5;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48255468 | 48255593 | 48255468 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48255087 | 48255343 | 48255087 | ID=MS.gene037191.t1.exon6;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48255087 | 48255343 | 48255087 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48254691 | 48254798 | 48254691 | ID=MS.gene037191.t1.exon7;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48254691 | 48254798 | 48254691 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48254238 | 48254379 | 48254238 | ID=MS.gene037191.t1.exon8;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48254238 | 48254379 | 48254238 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48253978 | 48254143 | 48253978 | ID=MS.gene037191.t1.exon9;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48253978 | 48254143 | 48253978 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48252336 | 48252493 | 48252336 | ID=MS.gene037191.t1.exon10;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48252336 | 48252493 | 48252336 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48251747 | 48252070 | 48251747 | ID=MS.gene037191.t1.exon11;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48251747 | 48252070 | 48251747 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48251586 | 48251660 | 48251586 | ID=MS.gene037191.t1.exon12;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48251586 | 48251660 | 48251586 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48251417 | 48251486 | 48251417 | ID=MS.gene037191.t1.exon13;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48251417 | 48251486 | 48251417 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48251149 | 48251306 | 48251149 | ID=MS.gene037191.t1.exon14;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48251149 | 48251306 | 48251149 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48250868 | 48251002 | 48250868 | ID=MS.gene037191.t1.exon15;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48250868 | 48251002 | 48250868 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| chr2.3 | exon | 48250766 | 48250792 | 48250766 | ID=MS.gene037191.t1.exon16;Parent=MS.gene037191.t1 |
| chr2.3 | CDS | 48250766 | 48250792 | 48250766 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
| Gene Sequence |
| Protein sequence |