Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037191.t1 | XP_013463548.1 | 97.9 | 870 | 17 | 1 | 1 | 869 | 1 | 870 | 0.00E+00 | 1751.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037191.t1 | Q3UDE2 | 36.4 | 517 | 264 | 14 | 390 | 873 | 153 | 637 | 1.3e-85 | 319.3 |
MS.gene037191.t1 | Q3UDE2 | 41.1 | 124 | 49 | 4 | 15 | 114 | 24 | 147 | 1.7e-16 | 89.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037191.t1 | A0A072V887 | 97.9 | 870 | 17 | 1 | 1 | 869 | 1 | 870 | 0.0e+00 | 1751.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene037191 | MS.gene75567 | PPI |
MS.gene037191 | MS.gene79126 | PPI |
MS.gene037191 | MS.gene045227 | PPI |
MS.gene037191 | MS.gene067039 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037191.t1 | MTR_2g041640 | 97.931 | 870 | 17 | 1 | 1 | 869 | 1 | 870 | 0.0 | 1767 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037191.t1 | AT1G77550 | 67.480 | 861 | 268 | 5 | 10 | 869 | 3 | 852 | 0.0 | 1197 |
Find 211 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTCCACTTTCCAATATTT+TGG | 0.092480 | 2.3:+48255233 | None:intergenic |
CATATTATATCTGCATCTTT+TGG | 0.139160 | 2.3:+48252463 | None:intergenic |
TATTCCTGTCAGATTGTTTC+TGG | 0.155637 | 2.3:-48251747 | MS.gene037191:CDS |
CAATTTCGGGGAGTGGGCTT+TGG | 0.216553 | 2.3:-48255978 | MS.gene037191:CDS |
CAACTTTCACAAGCAATTTC+GGG | 0.220240 | 2.3:-48255991 | MS.gene037191:CDS |
CACATGATGGGCGTCCTTTA+CGG | 0.233516 | 2.3:-48254036 | MS.gene037191:CDS |
TCAACTTTCACAAGCAATTT+CGG | 0.237496 | 2.3:-48255992 | MS.gene037191:CDS |
TATGATTCGATCGGTGTTTC+AGG | 0.240319 | 2.3:-48251250 | MS.gene037191:CDS |
ACTCATCTGTCTCAACTTAT+TGG | 0.250244 | 2.3:-48252003 | MS.gene037191:CDS |
CCAAACATTTCTGAACTAAA+TGG | 0.271808 | 2.3:-48255267 | MS.gene037191:CDS |
AGTTTCCATGAGTCGGATTA+TGG | 0.278974 | 2.3:+48251876 | None:intergenic |
TGCACTCGTGACTTTCTTCT+TGG | 0.281535 | 2.3:-48254311 | MS.gene037191:CDS |
ATTCTCTTGCTTACGTTCAT+TGG | 0.283449 | 2.3:-48255470 | MS.gene037191:CDS |
GGGAAGTGCCATTGACATTC+TGG | 0.284815 | 2.3:-48255298 | MS.gene037191:CDS |
CTGTATCTCTTGCAGTTAAA+TGG | 0.290895 | 2.3:-48251299 | MS.gene037191:intron |
TTAGTGGCACTTAGCCTATA+TGG | 0.294517 | 2.3:-48256264 | MS.gene037191:CDS |
AGGTACGTGATGGATGAATT+TGG | 0.296880 | 2.3:-48254778 | MS.gene037191:CDS |
GTCGATATTCCTGGTCCTCT+TGG | 0.300317 | 2.3:-48255321 | MS.gene037191:CDS |
GGAATTCTACTCGCCGCTTC+AGG | 0.302882 | 2.3:-48257968 | MS.gene037191:CDS |
CAGGTTGTTCAATATACTTC+TGG | 0.310081 | 2.3:+48251839 | None:intergenic |
TATTTGTGCATCCAAAATAT+TGG | 0.310689 | 2.3:-48255244 | MS.gene037191:CDS |
ACTTCTTGAATAATCAATTC+AGG | 0.312500 | 2.3:+48256225 | None:intergenic |
CAAAAGATGCAGATATAATA+TGG | 0.314062 | 2.3:-48252462 | MS.gene037191:CDS |
AGCTAACAACCAATATTCTT+TGG | 0.314596 | 2.3:-48251630 | MS.gene037191:CDS |
CGTGACTTTCTTCTTGGTAT+TGG | 0.317812 | 2.3:-48254305 | MS.gene037191:CDS |
TGAAACTCATTTCACTGTTA+TGG | 0.319368 | 2.3:-48251585 | MS.gene037191:intron |
TGATGATATGTTTCTTTCAT+TGG | 0.319684 | 2.3:-48256959 | MS.gene037191:CDS |
AATAGTGCGGGCCATGTTCC+AGG | 0.320213 | 2.3:+48251927 | None:intergenic |
AATTTCGGGGAGTGGGCTTT+GGG | 0.325758 | 2.3:-48255977 | MS.gene037191:CDS |
TCAGCTTGATCAGCATTAGA+TGG | 0.330080 | 2.3:+48255923 | None:intergenic |
ACTTGGATAAAATAGTTCTC+TGG | 0.333720 | 2.3:+48254236 | None:intergenic |
AATAAATCACAAGAATATTA+AGG | 0.336524 | 2.3:-48251450 | MS.gene037191:CDS |
TCGATATTCCTGGTCCTCTT+GGG | 0.347686 | 2.3:-48255320 | MS.gene037191:CDS |
TATGGCCAACACGGAATGTT+TGG | 0.355349 | 2.3:-48254346 | MS.gene037191:CDS |
ACTTACAAATTCTGAAGAAC+TGG | 0.358020 | 2.3:+48256159 | None:intergenic |
TCTTAAGGAGTTACCAGAAC+TGG | 0.362100 | 2.3:-48256026 | MS.gene037191:CDS |
ACATGATGGGCGTCCTTTAC+GGG | 0.362567 | 2.3:-48254035 | MS.gene037191:CDS |
CTTTCCTTCTCAGAATTTAG+TGG | 0.365312 | 2.3:-48256280 | MS.gene037191:intron |
AAGTTATACATCTAATTTCC+AGG | 0.366200 | 2.3:+48250755 | None:intergenic |
TCTAGTGATGGTGATCTTGC+AGG | 0.366268 | 2.3:-48256055 | MS.gene037191:intron |
AGACGGCGGTGGAGGGATTC+CGG | 0.366662 | 2.3:+48257941 | None:intergenic |
TTGTAAGCTTGTTTCCATAT+AGG | 0.366689 | 2.3:+48256250 | None:intergenic |
GGCTCATCAGGAGTCCATTC+AGG | 0.370563 | 2.3:+48255177 | None:intergenic |
TCTTGCAGGTATTATTCTTA+AGG | 0.373169 | 2.3:-48256041 | MS.gene037191:CDS |
GGACTTGCCTGCAAGATTCC+CGG | 0.375915 | 2.3:-48256938 | MS.gene037191:intron |
GATGTGTGTGGATATTGATT+TGG | 0.375921 | 2.3:-48257130 | MS.gene037191:CDS |
GTTGAAGAAATCACAACCTT+TGG | 0.377369 | 2.3:+48250907 | None:intergenic |
AAAGGTGCCACTCTAAAGTT+TGG | 0.383885 | 2.3:+48254730 | None:intergenic |
TGAACAACCTGCTTTATTCC+AGG | 0.384791 | 2.3:-48251827 | MS.gene037191:CDS |
TTGCAAGCTCGTGTACAATC+AGG | 0.394641 | 2.3:+48250968 | None:intergenic |
GAAGACTTCGCCAAAGTTCA+CGG | 0.397878 | 2.3:-48257989 | MS.gene037191:CDS |
TTCTTCCTCGCCTTCCTGAA+TGG | 0.401426 | 2.3:-48255191 | MS.gene037191:CDS |
CATTAATCAATTTCCATTTG+AGG | 0.403628 | 2.3:-48252380 | MS.gene037191:CDS |
GAATTATAAATCTCCAGTTC+TGG | 0.404024 | 2.3:+48256013 | None:intergenic |
ACTCGCCGCTTCAGGATTAC+CGG | 0.406444 | 2.3:-48257960 | MS.gene037191:CDS |
TAGAAGGACTAGACAACCTT+TGG | 0.406467 | 2.3:-48251960 | MS.gene037191:CDS |
CTTTCGTACTTGAACATTCG+TGG | 0.406787 | 2.3:-48255544 | MS.gene037191:CDS |
CGGTCATGAATAGGCTCATC+AGG | 0.408012 | 2.3:+48255165 | None:intergenic |
CCAACATCAAGGGCAATTTA+CGG | 0.409401 | 2.3:-48251195 | MS.gene037191:CDS |
CCATTTAGTTCAGAAATGTT+TGG | 0.413238 | 2.3:+48255267 | None:intergenic |
TTACGGACCGGGAATCTTGC+AGG | 0.414039 | 2.3:+48256931 | None:intergenic |
GCCACATTGCACTTATAATA+CGG | 0.416942 | 2.3:+48255145 | None:intergenic |
TTGAGGTGGTTGGAGCTTGA+TGG | 0.417086 | 2.3:-48256994 | MS.gene037191:CDS |
GGTTCGGAGTATGCACCCTT+TGG | 0.419754 | 2.3:-48251773 | MS.gene037191:CDS |
CTCTCAGAGGACTGCACAGT+GGG | 0.420225 | 2.3:+48254073 | None:intergenic |
ATAATCCGACTCATGGAAAC+TGG | 0.425940 | 2.3:-48251874 | MS.gene037191:CDS |
CTTATAATACGGTCATGAAT+AGG | 0.427782 | 2.3:+48255156 | None:intergenic |
ATGAATTTGGTTCTGCTTTG+CGG | 0.431191 | 2.3:-48254765 | MS.gene037191:CDS |
CTCTTGCTTACGTTCATTGG+AGG | 0.433275 | 2.3:-48255467 | MS.gene037191:intron |
CGAAAGGGATGGCAAACAAA+TGG | 0.435231 | 2.3:+48255561 | None:intergenic |
CTTGGATAAAATAGTTCTCT+GGG | 0.435795 | 2.3:+48254237 | None:intergenic |
TCTTCCTCGTTGATCATGCT+TGG | 0.437053 | 2.3:-48257796 | MS.gene037191:CDS |
AGTTAGTGTTGTAGAAATGT+TGG | 0.445277 | 2.3:-48257058 | MS.gene037191:CDS |
GTAACTGAGCTTTGCTCCAA+TGG | 0.447485 | 2.3:+48255517 | None:intergenic |
CACAAGCAATTTCGGGGAGT+GGG | 0.449915 | 2.3:-48255984 | MS.gene037191:CDS |
GCTGCGTGAAGTTCCGGGAT+TGG | 0.452297 | 2.3:-48257172 | MS.gene037191:CDS |
TATGACATGGATATCGTTGT+TGG | 0.452356 | 2.3:-48250944 | MS.gene037191:CDS |
TGATCTCCGTTATGTAGTAC+TGG | 0.455881 | 2.3:-48251794 | MS.gene037191:CDS |
AGGTTTCAGTGGAGAGTTTG+TGG | 0.462262 | 2.3:+48257915 | None:intergenic |
GATGTTGGACTATGCATCTC+AGG | 0.462658 | 2.3:+48251210 | None:intergenic |
TTTAGCAGAAACAATTCAAA+AGG | 0.464036 | 2.3:-48252335 | MS.gene037191:intron |
TTACCAACCTCTAGTAACTT+AGG | 0.465893 | 2.3:+48251141 | None:intergenic |
ATGACAAGACAAGCCTCAAA+TGG | 0.465912 | 2.3:+48252367 | None:intergenic |
TATTATGTACGCAAAATAGA+AGG | 0.466057 | 2.3:-48251976 | MS.gene037191:CDS |
ACTCTCCGACGCTTACAAAC+AGG | 0.466139 | 2.3:-48257765 | MS.gene037191:intron |
TATCTTCGCAAGGTTCGATC+TGG | 0.469087 | 2.3:+48257873 | None:intergenic |
ATTCCTGTCAGATTGTTTCT+GGG | 0.469381 | 2.3:-48251746 | MS.gene037191:intron |
CCCTCTGGCATGAAAAGAAA+AGG | 0.470377 | 2.3:+48254712 | None:intergenic |
TCCGTTATGTAGTACTGGTT+CGG | 0.471117 | 2.3:-48251789 | MS.gene037191:CDS |
GTTCGAGAGGTGAAAGAGAA+AGG | 0.471606 | 2.3:-48257027 | MS.gene037191:CDS |
TTTATCTTGCTTCAGGCACA+TGG | 0.472517 | 2.3:-48252063 | MS.gene037191:intron |
TGTGGAAGAGACGGCGGTGG+AGG | 0.472903 | 2.3:+48257933 | None:intergenic |
CACAGTGGGTGGTATTAAAC+TGG | 0.473738 | 2.3:+48254087 | None:intergenic |
TCCGGGATTGGCAGAGAGGA+TGG | 0.477944 | 2.3:-48257160 | MS.gene037191:CDS |
ATTGAACCAAGCAGTAAGTC+TGG | 0.478752 | 2.3:+48254262 | None:intergenic |
ATCTCTTGCAGTTAAATGGT+TGG | 0.478877 | 2.3:-48251295 | MS.gene037191:intron |
TCACAAGCAATTTCGGGGAG+TGG | 0.481347 | 2.3:-48255985 | MS.gene037191:CDS |
CCCATCCTCTCTGCCAATCC+CGG | 0.482424 | 2.3:+48257159 | None:intergenic |
TGGATATACATGCAAGAGTA+AGG | 0.489710 | 2.3:-48251275 | MS.gene037191:CDS |
TATAATATGGACCTGCGTAC+AGG | 0.490503 | 2.3:-48252449 | MS.gene037191:CDS |
CAACCTCTAGTAACTTAGGT+TGG | 0.493695 | 2.3:+48251145 | None:intergenic |
CCGTAAATTGCCCTTGATGT+TGG | 0.495083 | 2.3:+48251195 | None:intergenic |
CGATATTCCTGGTCCTCTTG+GGG | 0.503309 | 2.3:-48255319 | MS.gene037191:CDS |
GAAATGCTCGCCGCCGTCGA+AGG | 0.504521 | 2.3:+48257895 | None:intergenic |
GAACATTCGTGGAAATCCAT+TGG | 0.506538 | 2.3:-48255533 | MS.gene037191:CDS |
GAGTAGAATTCCGTGAACTT+TGG | 0.507996 | 2.3:+48257979 | None:intergenic |
AGAAGTATTCGCCCACATGA+TGG | 0.518087 | 2.3:-48254049 | MS.gene037191:CDS |
AGGCACATGGATCTCCTCAA+TGG | 0.518425 | 2.3:-48252050 | MS.gene037191:CDS |
TTGGACCAGTTTCCATGAGT+CGG | 0.519542 | 2.3:+48251869 | None:intergenic |
TCCATGAGTCGGATTATGGC+TGG | 0.520674 | 2.3:+48251880 | None:intergenic |
GAAAGGGATGGCAAACAAAT+GGG | 0.527047 | 2.3:+48255562 | None:intergenic |
TGAGTTTCAAGATTATAAGT+AGG | 0.529055 | 2.3:+48252021 | None:intergenic |
CCTTTCCAAACATTCCGTGT+TGG | 0.533360 | 2.3:+48254341 | None:intergenic |
TACAGTAGTATCAATAGTGC+GGG | 0.533708 | 2.3:+48251915 | None:intergenic |
ATCAAATTTAAACATCTCAA+AGG | 0.534502 | 2.3:-48256201 | MS.gene037191:CDS |
GCCGATGCTAGATTGCCCTC+TGG | 0.535309 | 2.3:+48254697 | None:intergenic |
ACCTTTGGATCTTAAAACCC+TGG | 0.538572 | 2.3:-48251945 | MS.gene037191:CDS |
GAAGTATTCGCCCACATGAT+GGG | 0.539104 | 2.3:-48254048 | MS.gene037191:CDS |
TGTAGAAATGTTGGAGAGTG+AGG | 0.539327 | 2.3:-48257049 | MS.gene037191:CDS |
AGTTAGACGAAACCTCTGTA+TGG | 0.539543 | 2.3:-48255086 | MS.gene037191:intron |
TTAAACATCTCAAAGGACTC+TGG | 0.541086 | 2.3:-48256194 | MS.gene037191:CDS |
CACGAATGTTCAAGTACGAA+AGG | 0.541790 | 2.3:+48255545 | None:intergenic |
GAACAACCTGCTTTATTCCA+GGG | 0.542789 | 2.3:-48251826 | MS.gene037191:CDS |
ATGGATATCGTTGTTGGAGA+AGG | 0.543040 | 2.3:-48250938 | MS.gene037191:CDS |
GGATAATTCTAGGTACGTGA+TGG | 0.545152 | 2.3:-48254788 | MS.gene037191:intron |
AGAAGAAGAAATGGTAGCAA+TGG | 0.546649 | 2.3:-48258041 | None:intergenic |
CAGCTTGATCAGCATTAGAT+GGG | 0.548839 | 2.3:+48255924 | None:intergenic |
TGCAAGCTCGTGTACAATCA+GGG | 0.549178 | 2.3:+48250969 | None:intergenic |
GCATCCAAAATATTGGAAAG+TGG | 0.551382 | 2.3:-48255237 | MS.gene037191:CDS |
GTTTGTGGAAGAGACGGCGG+TGG | 0.553090 | 2.3:+48257930 | None:intergenic |
CGTAAAGGACGCCCATCATG+TGG | 0.553316 | 2.3:+48254037 | None:intergenic |
GTTGGAGAGTGAGGTTCGAG+AGG | 0.553772 | 2.3:-48257040 | MS.gene037191:CDS |
TCCACTGAAACCTTCGACGG+CGG | 0.554667 | 2.3:-48257905 | MS.gene037191:CDS |
ATATCTGTGTATACCCGTAA+AGG | 0.555996 | 2.3:+48254022 | None:intergenic |
AACTTTGGCGAAGTCTTCGA+AGG | 0.557163 | 2.3:+48257994 | None:intergenic |
CCGGGATTGGCAGAGAGGAT+GGG | 0.560887 | 2.3:-48257159 | MS.gene037191:CDS |
GTTCTGCCAGACTTACTGCT+TGG | 0.561878 | 2.3:-48254268 | MS.gene037191:CDS |
AAGAGATTCCAGAATGTCAA+TGG | 0.562794 | 2.3:+48255290 | None:intergenic |
GATCTTAAAACCCTGGAACA+TGG | 0.564811 | 2.3:-48251938 | MS.gene037191:CDS |
CTCATGCGATTATCTTCGCA+AGG | 0.564935 | 2.3:+48257863 | None:intergenic |
ATCGGTGTTTCAGGCAGCTG+CGG | 0.566183 | 2.3:-48251241 | MS.gene037191:CDS |
TTGGACCTGTTTGTAAGCGT+CGG | 0.569827 | 2.3:+48257760 | None:intergenic |
TGTGTGGATATTGATTTGGA+TGG | 0.570847 | 2.3:-48257126 | MS.gene037191:CDS |
ACCAGCCATAATCCGACTCA+TGG | 0.571309 | 2.3:-48251881 | MS.gene037191:CDS |
TGATGGTACATTGAGGTGGT+TGG | 0.580792 | 2.3:-48257004 | MS.gene037191:CDS |
ATACCCAGAAACAATCTGAC+AGG | 0.581860 | 2.3:+48251743 | None:intergenic |
AGATGCATAGTCCAACATCA+AGG | 0.583143 | 2.3:-48251206 | MS.gene037191:CDS |
ACGAATGTTCAAGTACGAAA+GGG | 0.584367 | 2.3:+48255546 | None:intergenic |
GTGGAAGAGACGGCGGTGGA+GGG | 0.585364 | 2.3:+48257934 | None:intergenic |
TGGAGAGTTTGTGGAAGAGA+CGG | 0.585650 | 2.3:+48257924 | None:intergenic |
GGTTGATGAGGAGTTGAAGA+AGG | 0.587491 | 2.3:-48252428 | MS.gene037191:CDS |
AACAACCTGCTTTATTCCAG+GGG | 0.587507 | 2.3:-48251825 | MS.gene037191:CDS |
TTTCCAACCTAAGTTACTAG+AGG | 0.588700 | 2.3:-48251148 | MS.gene037191:intron |
GAGGAGTTGAAGAAGGCCAC+GGG | 0.591379 | 2.3:-48252421 | MS.gene037191:CDS |
TTGCGCAGAGATATATGGAA+AGG | 0.594711 | 2.3:-48255951 | MS.gene037191:CDS |
CCGACTTGTTAGAGCTGCTG+AGG | 0.595289 | 2.3:-48255495 | MS.gene037191:CDS |
GCCAGAGGGCAATCTAGCAT+CGG | 0.598031 | 2.3:-48254698 | MS.gene037191:CDS |
TGAGGAGTTGAAGAAGGCCA+CGG | 0.599213 | 2.3:-48252422 | MS.gene037191:CDS |
GGAGAAGGAGGTATTGCCAA+AGG | 0.601959 | 2.3:-48250923 | MS.gene037191:CDS |
GCCGCCGTCGAAGGTTTCAG+TGG | 0.605694 | 2.3:+48257904 | None:intergenic |
TTGCTGATCTGTTATTCCCG+TGG | 0.606174 | 2.3:+48252405 | None:intergenic |
CACTTACTGATTGCAAACTC+AGG | 0.606354 | 2.3:+48253971 | None:intergenic |
AACTTTCACAAGCAATTTCG+GGG | 0.606957 | 2.3:-48255990 | MS.gene037191:CDS |
TTTCTATTCTATGGCCAACA+CGG | 0.607111 | 2.3:-48254355 | MS.gene037191:CDS |
ATAGTGCGGGCCATGTTCCA+GGG | 0.608612 | 2.3:+48251928 | None:intergenic |
CTGACAGGAATATCTCCAAA+GGG | 0.611128 | 2.3:+48251758 | None:intergenic |
TCTGACAGGAATATCTCCAA+AGG | 0.611646 | 2.3:+48251757 | None:intergenic |
GGAGTCCATTCAGGAAGGCG+AGG | 0.613302 | 2.3:+48255186 | None:intergenic |
ATGATCAACGAGGAAGACAT+TGG | 0.615083 | 2.3:+48257802 | None:intergenic |
TCCGAACCAGTACTACATAA+CGG | 0.615865 | 2.3:+48251788 | None:intergenic |
GAGGTGAAAGAGAAAGGTGA+TGG | 0.616261 | 2.3:-48257021 | MS.gene037191:CDS |
GATGGTGAAACTGAGGTGAA+TGG | 0.618839 | 2.3:-48257108 | MS.gene037191:CDS |
GATATCGTTGTTGGAGAAGG+AGG | 0.622037 | 2.3:-48250935 | MS.gene037191:CDS |
AGTAAGGACTATGATTCGAT+CGG | 0.623174 | 2.3:-48251259 | MS.gene037191:CDS |
GCTCTCAGAGGACTGCACAG+TGG | 0.626388 | 2.3:+48254072 | None:intergenic |
CATTCACAATCTGATCAACA+AGG | 0.628020 | 2.3:-48255855 | MS.gene037191:intron |
GATGGGTTCTTTGATGTGTG+TGG | 0.629001 | 2.3:-48257142 | MS.gene037191:CDS |
GATGCATAGTCCAACATCAA+GGG | 0.630418 | 2.3:-48251205 | MS.gene037191:CDS |
CTCCTCATCAACCTGTACGC+AGG | 0.634177 | 2.3:+48252438 | None:intergenic |
CCAACACGGAATGTTTGGAA+AGG | 0.635916 | 2.3:-48254341 | MS.gene037191:CDS |
ATGTTCAAGTACGAAAGGGA+TGG | 0.635997 | 2.3:+48255550 | None:intergenic |
GCATGTTCTCAGAATTATCG+TGG | 0.636330 | 2.3:-48251476 | MS.gene037191:intron |
TCAGAGGACTGCACAGTGGG+TGG | 0.639769 | 2.3:+48254076 | None:intergenic |
GTCAAGTACTCTTCCACGTG+AGG | 0.644264 | 2.3:+48253998 | None:intergenic |
AAGTTCCGGGATTGGCAGAG+AGG | 0.644963 | 2.3:-48257164 | MS.gene037191:CDS |
AGTGGGTGGTATTAAACTGG+TGG | 0.645039 | 2.3:+48254090 | None:intergenic |
GACCTGCGTACAGGTTGATG+AGG | 0.645215 | 2.3:-48252440 | MS.gene037191:CDS |
AGATTAGATACACTCAGCAG+TGG | 0.646587 | 2.3:+48255896 | None:intergenic |
TTACAGTAGTATCAATAGTG+CGG | 0.648290 | 2.3:+48251914 | None:intergenic |
GCAATCTAGCATCGGCTGTG+AGG | 0.649411 | 2.3:-48254690 | MS.gene037191:intron |
GAATTTGAGGAAGAACATCA+AGG | 0.650482 | 2.3:-48251416 | MS.gene037191:intron |
ACGAGCTTGCAAATATGACA+TGG | 0.651494 | 2.3:-48250957 | MS.gene037191:CDS |
CCTCAGCAGCTCTAACAAGT+CGG | 0.652420 | 2.3:+48255495 | None:intergenic |
AGAAAGGTGATGGTACATTG+AGG | 0.652450 | 2.3:-48257011 | MS.gene037191:CDS |
CATCAGGAGTCCATTCAGGA+AGG | 0.654679 | 2.3:+48255181 | None:intergenic |
GGATTCCGGTAATCCTGAAG+CGG | 0.656333 | 2.3:+48257955 | None:intergenic |
GATATTCCTGGTCCTCTTGG+GGG | 0.661353 | 2.3:-48255318 | MS.gene037191:CDS |
TGATTTGGATGGTGAAACTG+AGG | 0.665167 | 2.3:-48257115 | MS.gene037191:CDS |
AAGGTGATGGTACATTGAGG+TGG | 0.674729 | 2.3:-48257008 | MS.gene037191:CDS |
TAAGTAGGCTGCAACCATTG+AGG | 0.676253 | 2.3:+48252036 | None:intergenic |
TGATGAGCCAAACTTTAGAG+TGG | 0.680214 | 2.3:-48254737 | MS.gene037191:CDS |
CTCTCCACTGAAACCTTCGA+CGG | 0.683719 | 2.3:-48257908 | MS.gene037191:CDS |
ATACACAGATATACCTCACG+TGG | 0.685643 | 2.3:-48254011 | MS.gene037191:CDS |
GTAAAGGACGCCCATCATGT+GGG | 0.688444 | 2.3:+48254038 | None:intergenic |
GCGAATACTTCTGCTCTCAG+AGG | 0.689727 | 2.3:+48254060 | None:intergenic |
ATGAATGTCATACCATACAG+AGG | 0.704504 | 2.3:+48255074 | None:intergenic |
TTGGATAAAATAGTTCTCTG+GGG | 0.706460 | 2.3:+48254238 | None:intergenic |
AGAGTTTGTGGAAGAGACGG+CGG | 0.716886 | 2.3:+48257927 | None:intergenic |
TAGAATCCGAAGTCAAAACG+AGG | 0.732532 | 2.3:+48257837 | None:intergenic |
ACCGTATTATAAGTGCAATG+TGG | 0.733685 | 2.3:-48255146 | MS.gene037191:CDS |
AAGTCCAAGCATGATCAACG+AGG | 0.739980 | 2.3:+48257792 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 48250766 | 48258053 | 48250766 | ID=MS.gene037191 |
chr2.3 | mRNA | 48250766 | 48258053 | 48250766 | ID=MS.gene037191.t1;Parent=MS.gene037191 |
chr2.3 | exon | 48257766 | 48258053 | 48257766 | ID=MS.gene037191.t1.exon1;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48257766 | 48258053 | 48257766 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48256939 | 48257193 | 48256939 | ID=MS.gene037191.t1.exon2;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48256939 | 48257193 | 48256939 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48256165 | 48256289 | 48256165 | ID=MS.gene037191.t1.exon3;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48256165 | 48256289 | 48256165 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48255856 | 48256072 | 48255856 | ID=MS.gene037191.t1.exon4;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48255856 | 48256072 | 48255856 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48255468 | 48255593 | 48255468 | ID=MS.gene037191.t1.exon5;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48255468 | 48255593 | 48255468 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48255087 | 48255343 | 48255087 | ID=MS.gene037191.t1.exon6;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48255087 | 48255343 | 48255087 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48254691 | 48254798 | 48254691 | ID=MS.gene037191.t1.exon7;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48254691 | 48254798 | 48254691 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48254238 | 48254379 | 48254238 | ID=MS.gene037191.t1.exon8;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48254238 | 48254379 | 48254238 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48253978 | 48254143 | 48253978 | ID=MS.gene037191.t1.exon9;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48253978 | 48254143 | 48253978 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48252336 | 48252493 | 48252336 | ID=MS.gene037191.t1.exon10;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48252336 | 48252493 | 48252336 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48251747 | 48252070 | 48251747 | ID=MS.gene037191.t1.exon11;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48251747 | 48252070 | 48251747 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48251586 | 48251660 | 48251586 | ID=MS.gene037191.t1.exon12;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48251586 | 48251660 | 48251586 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48251417 | 48251486 | 48251417 | ID=MS.gene037191.t1.exon13;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48251417 | 48251486 | 48251417 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48251149 | 48251306 | 48251149 | ID=MS.gene037191.t1.exon14;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48251149 | 48251306 | 48251149 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48250868 | 48251002 | 48250868 | ID=MS.gene037191.t1.exon15;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48250868 | 48251002 | 48250868 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
chr2.3 | exon | 48250766 | 48250792 | 48250766 | ID=MS.gene037191.t1.exon16;Parent=MS.gene037191.t1 |
chr2.3 | CDS | 48250766 | 48250792 | 48250766 | ID=cds.MS.gene037191.t1;Parent=MS.gene037191.t1 |
Gene Sequence |
Protein sequence |