AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038063

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038063.t1 MTR_1g069570 96.570 758 26 0 1 758 1 758 0.0 1526
MS.gene038063.t1 MTR_1g069570 96.603 677 23 0 1 677 1 677 0.0 1355
MS.gene038063.t1 MTR_7g098390 51.407 782 276 21 5 755 3 711 0.0 657
MS.gene038063.t1 MTR_1g080340 59.337 332 130 5 418 746 257 586 4.52e-143 433
MS.gene038063.t1 MTR_1g080340 27.206 272 143 11 6 255 4 242 5.41e-12 69.7
MS.gene038063.t1 MTR_8g106570 50.698 215 82 6 418 629 106 299 4.25e-62 211
MS.gene038063.t1 MTR_1g064770 74.286 70 18 0 553 622 22 91 6.67e-34 125
MS.gene038063.t1 MTR_5g013420 30.303 330 160 11 428 741 809 1084 2.06e-32 135
MS.gene038063.t1 MTR_5g013420 30.303 330 160 11 428 741 809 1084 2.07e-32 135
MS.gene038063.t1 MTR_7g052480 29.912 341 153 15 430 742 270 552 1.92e-30 127
MS.gene038063.t1 MTR_7g088370 30.723 332 147 11 430 743 436 702 4.11e-30 127
MS.gene038063.t1 MTR_3g011440 28.783 337 168 10 428 742 374 660 8.47e-30 126
MS.gene038063.t1 MTR_8g078505 37.158 183 103 5 561 741 361 533 1.88e-28 120
MS.gene038063.t1 MTR_8g042750 27.976 336 173 10 428 744 401 686 5.79e-28 120
MS.gene038063.t1 MTR_4g010830 29.499 339 151 14 428 741 700 975 2.13e-27 119
MS.gene038063.t1 MTR_8g078490 36.413 184 110 4 561 743 1073 1250 3.05e-26 116
MS.gene038063.t1 MTR_7g084090 35.071 211 102 7 559 742 551 753 1.74e-25 113
MS.gene038063.t1 MTR_5g018850 36.413 184 108 6 561 742 1327 1503 4.03e-25 112
MS.gene038063.t1 MTR_4g132610 37.234 188 101 7 561 742 867 1043 1.01e-24 111
MS.gene038063.t1 MTR_6g061270 35.981 214 96 9 559 742 488 690 1.27e-24 110
MS.gene038063.t1 MTR_4g010550 27.946 297 153 8 449 741 220 459 1.87e-23 104
MS.gene038063.t1 MTR_6g061200 28.895 353 184 12 395 742 371 661 2.53e-23 105
MS.gene038063.t1 MTR_1g048950 29.560 318 151 11 428 741 280 528 7.76e-21 97.4
MS.gene038063.t1 MTR_8g070070 26.433 314 145 12 430 720 507 757 2.78e-20 96.7
MS.gene038063.t1 MTR_8g070075 25.796 314 147 12 430 720 500 750 2.53e-19 93.6
MS.gene038063.t1 MTR_1g035420 25.472 318 151 12 430 724 396 650 3.46e-18 89.7
MS.gene038063.t1 MTR_6g027690 31.875 160 103 3 563 719 241 397 3.88e-17 85.1
MS.gene038063.t1 MTR_6g044690 29.545 176 109 5 559 721 392 565 4.14e-17 85.9
MS.gene038063.t1 MTR_3g088625 31.343 201 105 8 548 742 1288 1461 4.68e-17 86.7
MS.gene038063.t1 MTR_3g088625 31.343 201 105 8 548 742 1182 1355 4.92e-17 86.7
MS.gene038063.t1 MTR_6g043960 29.545 176 109 5 559 721 310 483 1.36e-16 84.0
MS.gene038063.t1 MTR_2g054460 28.736 174 109 5 561 721 294 465 2.66e-15 79.7
MS.gene038063.t1 MTR_7g445600 33.333 135 63 3 584 718 248 355 8.27e-15 77.0
MS.gene038063.t1 MTR_7g450730 31.148 183 113 6 568 741 322 500 3.30e-14 76.3
MS.gene038063.t1 MTR_1g098370 28.692 237 125 10 511 741 35 233 1.92e-13 73.9
MS.gene038063.t1 MTR_1g098000 27.528 178 99 6 569 741 78 230 9.70e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038063.t1 AT5G43990 40.228 788 347 21 5 749 3 709 3.52e-167 499
MS.gene038063.t1 AT5G43990 40.228 788 347 21 5 749 3 709 3.52e-167 499
MS.gene038063.t1 AT5G43990 40.228 788 347 21 5 749 3 709 3.52e-167 499
MS.gene038063.t1 AT5G43990 40.228 788 347 21 5 749 3 709 3.52e-167 499
MS.gene038063.t1 AT5G43990 40.228 788 347 21 5 749 26 732 5.61e-167 499
MS.gene038063.t1 AT5G43990 40.228 788 347 21 5 749 26 732 5.61e-167 499
MS.gene038063.t1 AT5G43990 40.337 771 350 19 5 749 3 689 3.36e-164 491
MS.gene038063.t1 AT5G43990 40.337 771 350 19 5 749 3 689 3.36e-164 491
MS.gene038063.t1 AT5G43990 40.337 771 350 19 5 749 3 689 3.36e-164 491
MS.gene038063.t1 AT5G43990 40.337 771 350 19 5 749 3 689 3.36e-164 491
MS.gene038063.t1 AT5G43990 40.337 771 350 19 5 749 26 712 7.99e-164 491
MS.gene038063.t1 AT5G43990 40.337 771 350 19 5 749 26 712 7.99e-164 491
MS.gene038063.t1 AT5G43990 39.551 713 323 19 63 749 10 640 2.09e-147 446
MS.gene038063.t1 AT5G43990 39.551 713 323 19 63 749 10 640 2.09e-147 446
MS.gene038063.t1 AT5G43990 39.551 713 323 19 63 749 10 640 2.09e-147 446
MS.gene038063.t1 AT5G43990 39.551 713 323 19 63 749 10 640 2.09e-147 446
MS.gene038063.t1 AT5G43990 39.655 696 326 17 63 749 10 620 2.95e-144 437
MS.gene038063.t1 AT1G04050 54.416 351 150 6 406 752 281 625 3.25e-126 390
MS.gene038063.t1 AT1G04050 31.977 172 95 7 228 380 176 344 9.00e-12 68.9
MS.gene038063.t1 AT1G04050 54.416 351 150 6 406 752 385 729 1.60e-125 392
MS.gene038063.t1 AT1G04050 31.977 172 95 7 228 380 280 448 7.47e-12 69.3
MS.gene038063.t1 AT1G04050 54.416 351 150 6 406 752 385 729 1.60e-125 392
MS.gene038063.t1 AT1G04050 31.977 172 95 7 228 380 280 448 7.47e-12 69.3
MS.gene038063.t1 AT3G04380 52.381 357 163 7 393 745 81 434 2.30e-125 382
MS.gene038063.t1 AT3G04380 53.314 347 155 7 403 745 118 461 3.98e-125 383
MS.gene038063.t1 AT3G04380 53.314 347 155 7 403 745 102 445 4.27e-125 382
MS.gene038063.t1 AT3G04380 52.381 357 163 7 393 745 81 434 4.76e-125 382
MS.gene038063.t1 AT3G04380 52.381 357 163 7 393 745 65 418 6.15e-125 381
MS.gene038063.t1 AT3G04380 53.314 347 155 7 403 745 118 461 7.35e-125 382
MS.gene038063.t1 AT2G23740 38.947 190 100 6 562 744 1200 1380 2.47e-28 122
MS.gene038063.t1 AT2G23740 38.947 190 100 6 562 744 1200 1380 2.47e-28 122
MS.gene038063.t1 AT2G23740 38.947 190 100 6 562 744 1200 1380 2.47e-28 122
MS.gene038063.t1 AT2G23740 38.947 190 100 6 562 744 1193 1373 2.83e-28 122
MS.gene038063.t1 AT1G73100 30.816 331 160 13 430 742 386 665 4.78e-27 117
MS.gene038063.t1 AT2G35160 29.206 315 152 12 430 741 507 753 1.22e-26 116
MS.gene038063.t1 AT2G35160 29.206 315 152 12 430 741 543 789 1.37e-26 116
MS.gene038063.t1 AT2G35160 29.206 315 152 12 430 741 543 789 1.37e-26 116
MS.gene038063.t1 AT2G35160 29.206 315 152 12 430 741 543 789 1.37e-26 116
MS.gene038063.t1 AT2G35160 29.206 315 152 12 430 741 543 789 1.37e-26 116
MS.gene038063.t1 AT2G22740 28.358 335 161 10 430 742 509 786 5.07e-25 111
MS.gene038063.t1 AT2G22740 28.358 335 161 10 430 742 509 786 5.07e-25 111
MS.gene038063.t1 AT5G04940 27.795 331 169 12 430 742 388 666 6.00e-24 107
MS.gene038063.t1 AT5G04940 27.795 331 169 12 430 742 388 666 6.00e-24 107
MS.gene038063.t1 AT3G03750 34.392 189 101 8 564 741 169 345 5.76e-22 98.6
MS.gene038063.t1 AT1G17770 32.836 201 117 7 558 742 491 689 6.09e-22 101
MS.gene038063.t1 AT2G23740 43.220 118 63 3 562 677 1200 1315 1.60e-20 97.8
MS.gene038063.t1 AT2G23740 43.220 118 63 3 562 677 1200 1315 1.60e-20 97.8
MS.gene038063.t1 AT4G13460 27.103 321 153 15 421 720 378 638 2.62e-19 93.2
MS.gene038063.t1 AT4G13460 27.103 321 153 15 421 720 378 638 2.62e-19 93.2
MS.gene038063.t1 AT2G33290 25.806 310 153 11 430 720 388 639 1.35e-16 84.7
MS.gene038063.t1 AT2G33290 25.806 310 153 11 430 720 388 639 1.35e-16 84.7
MS.gene038063.t1 AT2G33290 25.806 310 153 11 430 720 388 639 1.35e-16 84.7
MS.gene038063.t1 AT2G33290 25.806 310 153 11 430 720 388 639 1.35e-16 84.7
MS.gene038063.t1 AT2G24740 31.053 190 109 7 571 742 566 751 2.36e-15 80.9
MS.gene038063.t1 AT1G77300 28.311 219 111 10 535 742 980 1163 1.14e-14 79.0
MS.gene038063.t1 AT1G77300 28.311 219 111 10 535 742 980 1163 1.98e-14 78.2
MS.gene038063.t1 AT1G76710 29.050 179 95 7 569 741 72 224 1.59e-13 74.3
MS.gene038063.t1 AT1G76710 29.050 179 95 7 569 741 72 224 1.59e-13 74.3
MS.gene038063.t1 AT1G76710 29.050 179 95 7 569 741 72 224 1.93e-13 73.9
MS.gene038063.t1 AT1G76710 29.050 179 95 7 569 741 72 224 1.95e-13 73.9
MS.gene038063.t1 AT3G03750 28.947 190 94 7 564 741 169 329 2.81e-13 72.4

Find 173 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGCGCTGCTATGTTTC+TGG 0.156141 1.2:-52645575 None:intergenic
CCTCTCATGCAACTCTTTAA+TGG 0.157207 1.2:-52644194 None:intergenic
CTATGTTTCTGGTGGTAAAA+AGG 0.216526 1.2:-52645564 None:intergenic
ACTACTAAACTGAGTGAATT+TGG 0.220484 1.2:-52643335 None:intergenic
AGAGAACTATAGAGCTTTAT+TGG 0.221245 1.2:+52641417 MS.gene038063:CDS
TCATCAACGGGCTCAGATTT+AGG 0.222684 1.2:-52641993 None:intergenic
ACATTTCTCTATCTCGTATT+GGG 0.243654 1.2:+52643534 MS.gene038063:CDS
ACTAGGTCTGCGTTAATTTC+TGG 0.254584 1.2:+52646334 MS.gene038063:CDS
AACATGAAATGTGCTGAAAA+TGG 0.265651 1.2:+52644217 MS.gene038063:CDS
CTCCAGGCAATGACAGAGTT+TGG 0.318416 1.2:+52641316 MS.gene038063:CDS
TCTGGACACTCAATCTGAAT+TGG 0.318800 1.2:-52645404 None:intergenic
CCACTTCTTTACGTGTGTTA+TGG 0.320200 1.2:-52642794 None:intergenic
GAATAGCGCCTTAAGCTTGA+TGG 0.331994 1.2:-52642714 None:intergenic
CTCTGATGGGCTGGTGAAAA+GGG 0.332393 1.2:-52643218 None:intergenic
AACATTTCTCTATCTCGTAT+TGG 0.338243 1.2:+52643533 MS.gene038063:CDS
TGTGCCTGTACATATAAAAC+TGG 0.340913 1.2:+52643611 MS.gene038063:CDS
TTGAAAAGATTGAGATTAAG+AGG 0.343197 1.2:+52641753 MS.gene038063:CDS
CATCTCGGAACACAAGGTTT+TGG 0.345064 1.2:-52643502 None:intergenic
TTGATGGCACACCCGCCATT+GGG 0.345576 1.2:+52643108 MS.gene038063:CDS
CTCTTCAAGTGTCCTTTACA+TGG 0.346446 1.2:-52643779 None:intergenic
TACAGCTCAAGGCCTAATTA+AGG 0.350606 1.2:+52643649 MS.gene038063:CDS
TGTTCTACTGGATGCGGCTT+GGG 0.352177 1.2:+52644255 MS.gene038063:CDS
GAGCTGCAGCTCAGCTCTCC+AGG 0.359083 1.2:+52642869 MS.gene038063:CDS
GTCAAAGAGTGATGGTTGTT+TGG 0.362693 1.2:+52643754 MS.gene038063:CDS
GAAAGTTTATTAAAGAATGT+TGG 0.367343 1.2:+52643801 MS.gene038063:CDS
TGCTTAGATGCAGCGTCCTT+TGG 0.374054 1.2:+52644310 MS.gene038063:CDS
TGAGTAGGCATGCGGAAATC+TGG 0.394448 1.2:-52642894 None:intergenic
GCTCTGATGGGCTGGTGAAA+AGG 0.396124 1.2:-52643219 None:intergenic
ACCAGCCCATCAGAGCAGTT+TGG 0.397557 1.2:+52643226 MS.gene038063:CDS
GATGACACTGCGTTGTTTCG+AGG 0.400594 1.2:-52641870 None:intergenic
TCCAGGCAATGACAGAGTTT+GGG 0.403416 1.2:+52641317 MS.gene038063:CDS
CAGATGTTCTGATGCAAACT+TGG 0.408144 1.2:+52645373 MS.gene038063:intron
ATCTACTTACCCTGTTCTAC+TGG 0.409720 1.2:+52644243 MS.gene038063:CDS
AAGAGAATAATCAAATTTCA+TGG 0.413531 1.2:+52643429 MS.gene038063:CDS
GCATTTGTGTGTGAGTTTGC+TGG 0.417110 1.2:+52644160 MS.gene038063:CDS
CAGCGCATGAAGAGCTCACT+TGG 0.418578 1.2:+52645587 MS.gene038063:CDS
CAAGCCGCATCCAGTAGAAC+AGG 0.419068 1.2:-52644253 None:intergenic
TCACACACAAATGCTCCTTT+TGG 0.419691 1.2:-52644151 None:intergenic
CTGGACACTCAATCTGAATT+GGG 0.423030 1.2:-52645403 None:intergenic
TGGAATAACATACAACTTGC+AGG 0.432287 1.2:+52643871 MS.gene038063:CDS
AGTCTACAGAAGATCGTATA+AGG 0.434173 1.2:+52643372 MS.gene038063:CDS
TCCTGAAGCAAAAGTGAAAC+GGG 0.434933 1.2:+52641342 MS.gene038063:CDS
CATCATCCAAACTGCTCTGA+TGG 0.438786 1.2:-52643232 None:intergenic
ATGGGGACTTCGTACCTTAG+AGG 0.440946 1.2:+52644123 MS.gene038063:CDS
GTTGATGGCACACCCGCCAT+TGG 0.441443 1.2:+52643107 MS.gene038063:CDS
ATGCAGAACCATCAAGCTTA+AGG 0.443752 1.2:+52642706 MS.gene038063:intron
CAAGCTTAAGGCGCTATTCA+AGG 0.444240 1.2:+52642718 MS.gene038063:CDS
AACATTTAACGGAGCTTCCT+CGG 0.446061 1.2:-52641715 None:intergenic
TCCAAACTGCTCTGATGGGC+TGG 0.448015 1.2:-52643227 None:intergenic
CAGTTTGGATGATGCTGTAC+TGG 0.448999 1.2:+52643241 MS.gene038063:CDS
GAGGACAGTTGTTCCTGTAT+AGG 0.451056 1.2:+52643560 MS.gene038063:CDS
ACGGGTTCTCACTCATCAAA+TGG 0.451201 1.2:+52643149 MS.gene038063:CDS
TCATAATCTTCCTCATCAAC+GGG 0.455912 1.2:-52642005 None:intergenic
CTATGTGAGACTTCTTCAAC+GGG 0.457238 1.2:-52641809 None:intergenic
CTGTTCTACTGGATGCGGCT+TGG 0.459130 1.2:+52644254 MS.gene038063:CDS
TCCCAAACTCTGTCATTGCC+TGG 0.460190 1.2:-52641318 None:intergenic
CAGTAAAAGCAATGCTGTTG+AGG 0.466634 1.2:-52643710 None:intergenic
ACATGATAGTAGTAATGATC+TGG 0.467187 1.2:-52645422 None:intergenic
TTGGATGCTATATTTGAAGA+AGG 0.467640 1.2:+52641436 MS.gene038063:CDS
CAAGATGCAACTTCCTATAC+AGG 0.475226 1.2:-52643573 None:intergenic
GGAAGAAGAGATGGAGGCCG+AGG 0.476544 1.2:+52641698 MS.gene038063:intron
TGGGGTATGTAGTTGAAAGG+TGG 0.478541 1.2:-52643482 None:intergenic
TTTGGAGACACGGGATCCTC+CGG 0.478825 1.2:-52643317 None:intergenic
TGTGATAGCCTCTTCAGCTC+AGG 0.484761 1.2:+52642827 MS.gene038063:CDS
AGAACAACTTCTAAAGATGA+TGG 0.485289 1.2:+52642917 MS.gene038063:CDS
ACAGTTTGACAGGTTGATCA+TGG 0.487440 1.2:-52645971 None:intergenic
TTGCACTGAAACAGTTTGAC+AGG 0.487466 1.2:-52645981 None:intergenic
CGAGCAGATTCAACATTTAA+CGG 0.488022 1.2:-52641726 None:intergenic
TTTAGAAGTTGTTCTTGAGT+AGG 0.492209 1.2:-52642909 None:intergenic
ACGGGGAAGAAGCTGAGCTA+GGG 0.492408 1.2:-52641791 None:intergenic
TACTTCTCCCTGAGCTGAAG+AGG 0.498970 1.2:-52642835 None:intergenic
GGCAGTAAGGATTTGGACAC+GGG 0.499376 1.2:+52643131 MS.gene038063:CDS
GAAGAAGTCTCACATAGAAA+AGG 0.499568 1.2:+52641815 MS.gene038063:CDS
TTCCTGAAGCAAAAGTGAAA+CGG 0.501547 1.2:+52641341 MS.gene038063:CDS
GATGTTAGTGACCTTACAAA+AGG 0.503486 1.2:+52643404 MS.gene038063:CDS
TGCGAGATGCTAGTTATGAC+AGG 0.503811 1.2:+52641925 MS.gene038063:CDS
AGCTGCAGCTCAGCTCTCCA+GGG 0.513352 1.2:+52642870 MS.gene038063:CDS
ATCAATTGTTCTGTTCATCT+CGG 0.513406 1.2:-52643267 None:intergenic
ACATGAAATGTGCTGAAAAT+GGG 0.514519 1.2:+52644218 MS.gene038063:CDS
CTCATAATCTTCCTCATCAA+CGG 0.516381 1.2:-52642006 None:intergenic
GAAAAGGACACAGCACTTGA+AGG 0.519631 1.2:+52641831 MS.gene038063:CDS
TCTATCTCGTATTGGGGCTG+AGG 0.521876 1.2:+52643541 MS.gene038063:CDS
TTGCTAGATTTATCAATCAC+AGG 0.526124 1.2:+52644338 MS.gene038063:CDS
TCACTCTTTGACCTTTCAAG+TGG 0.526254 1.2:-52643743 None:intergenic
CACATCCGAAGGAAAAGGAT+GGG 0.533153 1.2:+52644105 MS.gene038063:CDS
AATGTGGCAGTAAGTTCTGC+AGG 0.533366 1.2:+52646003 MS.gene038063:CDS
TTACCCTGTTCTACTGGATG+CGG 0.536254 1.2:+52644249 MS.gene038063:CDS
ATCATCCAAACTGCTCTGAT+GGG 0.536390 1.2:-52643231 None:intergenic
AACGGGGAAGAAGCTGAGCT+AGG 0.536976 1.2:-52641792 None:intergenic
GATGGCACACCCGCCATTGG+GGG 0.541125 1.2:+52643110 MS.gene038063:CDS
GCAAAGATTGTCCACTTGAA+AGG 0.541466 1.2:+52643732 MS.gene038063:CDS
TAAGAAGCATGTGGTGATGC+AGG 0.543204 1.2:-52641957 None:intergenic
TGCATTCTAACATCACTTTG+TGG 0.547428 1.2:-52643293 None:intergenic
CAGAAGCATCTCGGAACACA+AGG 0.547625 1.2:-52643508 None:intergenic
TTACGTGTGTTATGGTGTGA+TGG 0.548330 1.2:-52642786 None:intergenic
GCATGCGGAAATCTGGTCCC+TGG 0.548829 1.2:-52642887 None:intergenic
CATTTCTCTATCTCGTATTG+GGG 0.549601 1.2:+52643535 MS.gene038063:CDS
AAACTCTGTCATTGCCTGGA+GGG 0.550126 1.2:-52641314 None:intergenic
TCACATCCGAAGGAAAAGGA+TGG 0.551509 1.2:+52644104 MS.gene038063:CDS
TCTATGTGAGACTTCTTCAA+CGG 0.553756 1.2:-52641810 None:intergenic
TTGGGATTCAACATTTGTGA+AGG 0.553918 1.2:+52644273 MS.gene038063:CDS
AGGCGCTATTCAAGGAAGAA+TGG 0.557745 1.2:+52642726 MS.gene038063:CDS
CCATTAAAGAGTTGCATGAG+AGG 0.561929 1.2:+52644194 MS.gene038063:CDS
TGAGCGGCGTCCCCTTGCAA+TGG 0.562017 1.2:+52642025 MS.gene038063:CDS
ATCAAGCATAGATGTGTCAA+AGG 0.563277 1.2:+52643076 MS.gene038063:CDS
GGTATGTAGTTGAAAGGTGG+TGG 0.563966 1.2:-52643479 None:intergenic
GTTATGGTGTGATGGTGTCA+TGG 0.564381 1.2:-52642778 None:intergenic
TCAAAGGAATCAGAGGTTGA+TGG 0.565059 1.2:+52643092 MS.gene038063:CDS
AAGTGATGTTAGAATGCAGC+CGG 0.565115 1.2:+52643298 MS.gene038063:CDS
TTATACGATCTTCTGTAGAC+TGG 0.565319 1.2:-52643370 None:intergenic
ATATAACCAGGAAGAAGAGA+TGG 0.566148 1.2:+52641689 MS.gene038063:intron
AGAGAATAATCAAATTTCAT+GGG 0.566667 1.2:+52643430 MS.gene038063:CDS
AGTAAAAGCAATGCTGTTGA+GGG 0.566678 1.2:-52643709 None:intergenic
GTGATGGTGTCATGGAGACA+TGG 0.568469 1.2:-52642770 None:intergenic
ACCTTAGAGGAACTGCCAAA+AGG 0.569461 1.2:+52644136 MS.gene038063:CDS
TGTTGGAGCAAATGTGGCTG+TGG 0.569633 1.2:+52643818 MS.gene038063:CDS
GTGCCTGTACATATAAAACT+GGG 0.569930 1.2:+52643612 MS.gene038063:CDS
AAATTTGCATATACAGCTCA+AGG 0.570666 1.2:+52643638 MS.gene038063:CDS
TGATGGCACACCCGCCATTG+GGG 0.571000 1.2:+52643109 MS.gene038063:CDS
CAGTGTCATCTGATGTGAAT+GGG 0.571710 1.2:+52641883 MS.gene038063:CDS
TCTGCCTTGGTTTCACCTCG+AGG 0.574171 1.2:+52643194 MS.gene038063:CDS
AGAAATTAACGCAGACCTAG+TGG 0.576176 1.2:-52646332 None:intergenic
TAAATCTGAGCCCGTTGATG+AGG 0.579697 1.2:+52641995 MS.gene038063:CDS
TCTGATGGGCTGGTGAAAAG+GGG 0.580258 1.2:-52643217 None:intergenic
CCATAACACACGTAAAGAAG+TGG 0.582122 1.2:+52642794 MS.gene038063:CDS
AAATGTTAACAGAAGCATCT+CGG 0.583016 1.2:-52643517 None:intergenic
CTGAGTGAATTTGGAGACAC+GGG 0.587085 1.2:-52643326 None:intergenic
GTGATAGCCTCTTCAGCTCA+GGG 0.595212 1.2:+52642828 MS.gene038063:CDS
AAATCTAGCAATGTTGCCAA+AGG 0.600969 1.2:-52644326 None:intergenic
GTCATAACTAGCATCTCGCA+TGG 0.608733 1.2:-52641922 None:intergenic
AGATATATGTGATTGCATGT+TGG 0.610959 1.2:+52643004 MS.gene038063:CDS
AGATGTGTCAAAGGAATCAG+AGG 0.611371 1.2:+52643085 MS.gene038063:CDS
CGGGGAAGAAGCTGAGCTAG+GGG 0.611782 1.2:-52641790 None:intergenic
TCAAACGATAACTCACAAGA+AGG 0.613211 1.2:+52643041 MS.gene038063:CDS
CTTGAAAGGTCAAAGAGTGA+TGG 0.617940 1.2:+52643746 MS.gene038063:CDS
GCAGTGTCATCTGATGTGAA+TGG 0.620539 1.2:+52641882 MS.gene038063:CDS
TCATAACTAGCATCTCGCAT+GGG 0.621862 1.2:-52641921 None:intergenic
ACATCCGAAGGAAAAGGATG+GGG 0.623345 1.2:+52644106 MS.gene038063:CDS
GGTTGTTTGGAACCATGTAA+AGG 0.624624 1.2:+52643767 MS.gene038063:CDS
GGGCAGTAAGGATTTGGACA+CGG 0.626593 1.2:+52643130 MS.gene038063:CDS
GCTGGTGAAAAGGGGCCTCG+AGG 0.629263 1.2:-52643209 None:intergenic
AGTTGTATGTTATTCCACGC+TGG 0.629403 1.2:-52643865 None:intergenic
AAAGAATGTTGGAGCAAATG+TGG 0.629844 1.2:+52643812 MS.gene038063:CDS
GCGAGATGCTAGTTATGACA+GGG 0.630984 1.2:+52641926 MS.gene038063:CDS
ATGCGCTGCTATGTTTCTGG+TGG 0.632146 1.2:-52645572 None:intergenic
AACGGGCTCAGATTTAGGTA+CGG 0.633960 1.2:-52641988 None:intergenic
TCTTCTGTAGACTGGTGATG+TGG 0.636889 1.2:-52643362 None:intergenic
CAAACTCTGTCATTGCCTGG+AGG 0.639593 1.2:-52641315 None:intergenic
ACTGATTATAAATGGCGCCA+AGG 0.643115 1.2:+52641269 None:intergenic
GTTGTTCTTGAGTAGGCATG+CGG 0.647576 1.2:-52642902 None:intergenic
AGCGCATGAAGAGCTCACTT+GGG 0.648600 1.2:+52645588 MS.gene038063:CDS
AATGGTGTTACTGAAAAGCA+AGG 0.651736 1.2:+52642744 MS.gene038063:CDS
TGTCATCTGATGTGAATGGG+AGG 0.652442 1.2:+52641886 MS.gene038063:CDS
TGATGGTGTCATGGAGACAT+GGG 0.657309 1.2:-52642769 None:intergenic
ACTGAGTGAATTTGGAGACA+CGG 0.658366 1.2:-52643327 None:intergenic
GTCAATTCATAAGAAGCATG+TGG 0.660777 1.2:-52641966 None:intergenic
ACAACTTCTAAAGATGATGG+AGG 0.666072 1.2:+52642920 MS.gene038063:CDS
GCCTGTACATATAAAACTGG+GGG 0.669381 1.2:+52643614 MS.gene038063:CDS
TAACCAGGAAGAAGAGATGG+AGG 0.670725 1.2:+52641692 MS.gene038063:intron
GTTGGAGCAAATGTGGCTGT+GGG 0.672821 1.2:+52643819 MS.gene038063:CDS
TGCCTGTACATATAAAACTG+GGG 0.672868 1.2:+52643613 MS.gene038063:CDS
TGATGTTAGAATGCAGCCGG+AGG 0.679721 1.2:+52643301 MS.gene038063:CDS
TGTGGCTGTGGGAAACAATG+TGG 0.681976 1.2:+52643830 MS.gene038063:CDS
GTCATCTGATGTGAATGGGA+GGG 0.682522 1.2:+52641887 MS.gene038063:CDS
AAGGACACAGCACTTGAAGG+CGG 0.696062 1.2:+52641834 MS.gene038063:CDS
GGAAATCGCGTTATCCAGCG+TGG 0.696912 1.2:+52643851 MS.gene038063:CDS
AAACTGTTTCAGTGCAAATG+TGG 0.701775 1.2:+52645987 MS.gene038063:CDS
AAGCCGCATCCAGTAGAACA+GGG 0.704391 1.2:-52644252 None:intergenic
GGGGCCTCGAGGTGAAACCA+AGG 0.711820 1.2:-52643198 None:intergenic
CGAGATGCTAGTTATGACAG+GGG 0.714402 1.2:+52641927 MS.gene038063:CDS
TTGATGAGGAAGATTATGAG+CGG 0.719615 1.2:+52642009 MS.gene038063:CDS
GTTGTTTCGAGGCTGCTGTG+AGG 0.724516 1.2:-52641859 None:intergenic
TATGTGAGACTTCTTCAACG+GGG 0.806237 1.2:-52641808 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATGTATTTATAATATTAT+AGG + chr1.2:52644708-52644727 MS.gene038063:intron 10.0%
!! TAAAAATTATGAATCAATAT+TGG - chr1.2:52643943-52643962 None:intergenic 10.0%
!! ATTGATATTCAGAAAAAAAA+TGG + chr1.2:52644490-52644509 MS.gene038063:intron 15.0%
!! CAAAAGAGTAAAATTAAATA+CGG - chr1.2:52646303-52646322 None:intergenic 15.0%
!! TAGAAAAAAAAGAAGATATT+GGG + chr1.2:52644668-52644687 MS.gene038063:intron 15.0%
!! TGTTGAAAAAGAAAAATAAT+TGG - chr1.2:52642610-52642629 None:intergenic 15.0%
!!! AAAAAAAATTCTTTTCTCTT+CGG - chr1.2:52644811-52644830 None:intergenic 15.0%
!!! AAAACATTTTAAAAATGTAC+TGG - chr1.2:52644053-52644072 None:intergenic 15.0%
!!! AAAATTTTATACAATATAGG+AGG - chr1.2:52645664-52645683 None:intergenic 15.0%
!!! AAACATTTTAAAAATGTACT+GGG - chr1.2:52644052-52644071 None:intergenic 15.0%
!!! ATAAAATTTTCACTTCTTTA+TGG + chr1.2:52645674-52645693 MS.gene038063:intron 15.0%
!!! ATTTTTTTTCTGAATATCAA+TGG - chr1.2:52644491-52644510 None:intergenic 15.0%
!!! GTGAAAATTTTATACAATAT+AGG - chr1.2:52645667-52645686 None:intergenic 15.0%
!! AAAATGTATTTGTTTACTAG+TGG - chr1.2:52643918-52643937 None:intergenic 20.0%
!! AAGAGAATAATCAAATTTCA+TGG + chr1.2:52643429-52643448 MS.gene038063:CDS 20.0%
!! AGAGAATAATCAAATTTCAT+GGG + chr1.2:52643430-52643449 MS.gene038063:CDS 20.0%
!! CTAGAAAAAAAAGAAGATAT+TGG + chr1.2:52644667-52644686 MS.gene038063:intron 20.0%
!! GAAAGTTTATTAAAGAATGT+TGG + chr1.2:52643801-52643820 MS.gene038063:CDS 20.0%
!! GGAATAACATTATAATACAT+AGG - chr1.2:52644030-52644049 None:intergenic 20.0%
!! TTTGCTAAATGTATTATTTG+TGG + chr1.2:52642245-52642264 MS.gene038063:intron 20.0%
!!! AACATTTTAAAAATGTACTG+GGG - chr1.2:52644051-52644070 None:intergenic 20.0%
!!! ACTTATTTTCTAGTTTTTCA+TGG + chr1.2:52645774-52645793 MS.gene038063:intron 20.0%
!!! AGTTTTTATCAAACAACTTA+AGG - chr1.2:52641381-52641400 None:intergenic 20.0%
!!! GTAAGTTTTGTTATGTAATA+TGG + chr1.2:52645610-52645629 MS.gene038063:intron 20.0%
!!! TAACATTCATAATTTTCTGT+TGG + chr1.2:52641601-52641620 MS.gene038063:intron 20.0%
!!! TATTTTTATTTTGTTTCTGC+AGG + chr1.2:52645926-52645945 MS.gene038063:intron 20.0%
!!! TGAATGTTTTTTGGTTATTT+AGG + chr1.2:52645323-52645342 MS.gene038063:intron 20.0%
!!! TTAAGTTGTTTGATAAAAAC+TGG + chr1.2:52641380-52641399 MS.gene038063:CDS 20.0%
! AAAAAAATGGAGGATATAGT+TGG + chr1.2:52644503-52644522 MS.gene038063:intron 25.0%
! AAAAAATGGAGGATATAGTT+GGG + chr1.2:52644504-52644523 MS.gene038063:intron 25.0%
! AAAATAGCTTGAGTTTAATG+TGG + chr1.2:52644738-52644757 MS.gene038063:intron 25.0%
! AAGGATATTTAAACAGTTTG+GGG - chr1.2:52645033-52645052 None:intergenic 25.0%
! AGAAACTCATAAATCAGTAA+AGG - chr1.2:52642512-52642531 None:intergenic 25.0%
! AGCAAAAGATTAAGTAAAAC+AGG - chr1.2:52646070-52646089 None:intergenic 25.0%
! AGTAAACTACAAAAATGAAC+AGG - chr1.2:52645872-52645891 None:intergenic 25.0%
! ATTCCCATCTTTATAAAACT+GGG + chr1.2:52645106-52645125 MS.gene038063:intron 25.0%
! CAAGGATATTTAAACAGTTT+GGG - chr1.2:52645034-52645053 None:intergenic 25.0%
! CAGTTGGGATAATTTATTTA+CGG + chr1.2:52645747-52645766 MS.gene038063:intron 25.0%
! CATTATAATACATAGGAACT+TGG - chr1.2:52644023-52644042 None:intergenic 25.0%
! CATTTAGTAAGATTATACTG+AGG + chr1.2:52645842-52645861 MS.gene038063:intron 25.0%
! CCAAAAATTCTTCCTTAATT+AGG - chr1.2:52643664-52643683 None:intergenic 25.0%
! CTAAATGTATTATTTGTGGA+TGG + chr1.2:52642249-52642268 MS.gene038063:intron 25.0%
! CTCAGTATAATCTTACTAAA+TGG - chr1.2:52645844-52645863 None:intergenic 25.0%
! GATATTCAGAAAAAAAATGG+AGG + chr1.2:52644493-52644512 MS.gene038063:intron 25.0%
! GCATTATTAAACAATCCAAA+AGG - chr1.2:52646195-52646214 None:intergenic 25.0%
! TAATATGAGATTACCAACAT+AGG + chr1.2:52644600-52644619 MS.gene038063:intron 25.0%
! TATTCCCATCTTTATAAAAC+TGG + chr1.2:52645105-52645124 MS.gene038063:intron 25.0%
! TCAAGGATATTTAAACAGTT+TGG - chr1.2:52645035-52645054 None:intergenic 25.0%
! TTGAAAAGATTGAGATTAAG+AGG + chr1.2:52641753-52641772 MS.gene038063:CDS 25.0%
!! AAAAGTGCAAACAAGTAATA+GGG - chr1.2:52644531-52644550 None:intergenic 25.0%
!! ATTTTTCCGACAGAAAAATT+TGG - chr1.2:52642978-52642997 None:intergenic 25.0%
!! CCTAATTAAGGAAGAATTTT+TGG + chr1.2:52643661-52643680 MS.gene038063:CDS 25.0%
!! CTTAATCTCAATCTTTTCAA+AGG - chr1.2:52641753-52641772 None:intergenic 25.0%
!! TAATTTTACTCTTTTGATGC+AGG + chr1.2:52646307-52646326 MS.gene038063:intron 25.0%
!! TCATGAAATTTTCTACACTT+GGG + chr1.2:52645637-52645656 MS.gene038063:intron 25.0%
!! TGTTTTACTTAATCTTTTGC+TGG + chr1.2:52646069-52646088 MS.gene038063:intron 25.0%
!! TTATTCTTCTTTTCAAACCA+TGG + chr1.2:52642177-52642196 MS.gene038063:intron 25.0%
!! TTCATGAAATTTTCTACACT+TGG + chr1.2:52645636-52645655 MS.gene038063:intron 25.0%
!! TTGTAAAACATCAAAAGCAT+TGG - chr1.2:52645532-52645551 None:intergenic 25.0%
!! TTTTTCCGACAGAAAAATTT+GGG - chr1.2:52642977-52642996 None:intergenic 25.0%
!!! ATTGTTGGATTTTATTTGAC+AGG + chr1.2:52641538-52641557 MS.gene038063:intron 25.0%
!!! GCAAATGTTTGAATGTTTTT+TGG + chr1.2:52645314-52645333 MS.gene038063:intron 25.0%
AAATAATTGGTCAGATTCAG+AGG - chr1.2:52642597-52642616 None:intergenic 30.0%
AAATGCTTATGTACTTTGAG+TGG + chr1.2:52645810-52645829 MS.gene038063:intron 30.0%
AAATTTGCATATACAGCTCA+AGG + chr1.2:52643638-52643657 MS.gene038063:CDS 30.0%
AACATGAAATGTGCTGAAAA+TGG + chr1.2:52644217-52644236 MS.gene038063:CDS 30.0%
AACATGATGCAATTATGCAA+TGG - chr1.2:52642417-52642436 None:intergenic 30.0%
AACATTTCTCTATCTCGTAT+TGG + chr1.2:52643533-52643552 MS.gene038063:CDS 30.0%
ACATGAAATGTGCTGAAAAT+GGG + chr1.2:52644218-52644237 MS.gene038063:CDS 30.0%
ACATGATAGTAGTAATGATC+TGG - chr1.2:52645425-52645444 None:intergenic 30.0%
ACATTTAGCAAAACCATAGT+TGG - chr1.2:52642237-52642256 None:intergenic 30.0%
ACATTTCTCTATCTCGTATT+GGG + chr1.2:52643534-52643553 MS.gene038063:CDS 30.0%
ACTACTAAACTGAGTGAATT+TGG - chr1.2:52643338-52643357 None:intergenic 30.0%
AGATATATGTGATTGCATGT+TGG + chr1.2:52643004-52643023 MS.gene038063:CDS 30.0%
AGGACATAACAATTGATATC+TGG + chr1.2:52644432-52644451 MS.gene038063:intron 30.0%
AGGCAGAAAAAGAATTAACT+TGG - chr1.2:52643181-52643200 None:intergenic 30.0%
AGTTTGCATAAGATACTCTA+TGG + chr1.2:52642536-52642555 MS.gene038063:intron 30.0%
ATCAATTGTTCTGTTCATCT+CGG - chr1.2:52643270-52643289 None:intergenic 30.0%
ATTTCTCACCTATTGTTTCA+AGG + chr1.2:52644367-52644386 MS.gene038063:intron 30.0%
CAGATTAGTGTAACAACAAA+AGG - chr1.2:52645492-52645511 None:intergenic 30.0%
CATTTAGCAAAACCATAGTT+GGG - chr1.2:52642236-52642255 None:intergenic 30.0%
TGCAAACTTACTTCTATTGT+TGG + chr1.2:52641523-52641542 MS.gene038063:intron 30.0%
TTACAATGTTCAAAATGAGC+CGG + chr1.2:52644884-52644903 MS.gene038063:intron 30.0%
TTAGTTGTAATTGGCATGTT+TGG + chr1.2:52642105-52642124 MS.gene038063:intron 30.0%
TTGCTAGATTTATCAATCAC+AGG + chr1.2:52644338-52644357 MS.gene038063:CDS 30.0%
TTGGATGCTATATTTGAAGA+AGG + chr1.2:52641436-52641455 MS.gene038063:CDS 30.0%
TTTAGAAGTTGTTCTTGAGT+AGG - chr1.2:52642912-52642931 None:intergenic 30.0%
TTTCATTTGCATGCTTCTAA+TGG + chr1.2:52645215-52645234 MS.gene038063:intron 30.0%
TTTGGCATCTTAGTTGTAAT+TGG + chr1.2:52642096-52642115 MS.gene038063:intron 30.0%
! AGAACAACTTCTAAAGATGA+TGG + chr1.2:52642917-52642936 MS.gene038063:CDS 30.0%
! AGAGAACTATAGAGCTTTAT+TGG + chr1.2:52641417-52641436 MS.gene038063:CDS 30.0%
! AGTTAATTCTTTTTCTGCCT+TGG + chr1.2:52643181-52643200 MS.gene038063:CDS 30.0%
! ATATTTAAACAGTTTGGGGT+AGG - chr1.2:52645029-52645048 None:intergenic 30.0%
! GAAAAGTGCAAACAAGTAAT+AGG - chr1.2:52644532-52644551 None:intergenic 30.0%
! TATGATTAAATTTTCCTCCC+TGG - chr1.2:52644635-52644654 None:intergenic 30.0%
! TATTCTCTTCTCCTTTTGTA+AGG - chr1.2:52643418-52643437 None:intergenic 30.0%
! TATTTAAACAGTTTGGGGTA+GGG - chr1.2:52645028-52645047 None:intergenic 30.0%
! TGGATTGATAGTTGTTGAAA+AGG + chr1.2:52646089-52646108 MS.gene038063:intron 30.0%
! TTCTGCATTTTCATATAACC+AGG + chr1.2:52641677-52641696 MS.gene038063:intron 30.0%
! TTTCCCTAGCTTGAATTTTA+GGG - chr1.2:52644399-52644418 None:intergenic 30.0%
! TTTTCCCTAGCTTGAATTTT+AGG - chr1.2:52644400-52644419 None:intergenic 30.0%
!! AAACAGTTTTTCAGACTTCA+AGG - chr1.2:52645463-52645482 None:intergenic 30.0%
!! AAATGTTAACAGAAGCATCT+CGG - chr1.2:52643520-52643539 None:intergenic 30.0%
!! AAGCCCAGTTTTATAAAGAT+GGG - chr1.2:52645112-52645131 None:intergenic 30.0%
!! TAAGCCCAGTTTTATAAAGA+TGG - chr1.2:52645113-52645132 None:intergenic 30.0%
!! TATGTTTCTGGTGGTAAAAA+GGG - chr1.2:52645566-52645585 None:intergenic 30.0%
!! TTGTTTTTCTTTTGTGGTTC+TGG - chr1.2:52641566-52641585 None:intergenic 30.0%
!! TTTTTCAGACTTCAAGGATT+AGG - chr1.2:52645457-52645476 None:intergenic 30.0%
!!! ACTCTCTTGTTTTTCTTTTG+TGG - chr1.2:52641572-52641591 None:intergenic 30.0%
!!! ATTTTGTTTCTGCAGGATTA+TGG + chr1.2:52645933-52645952 MS.gene038063:intron 30.0%
AAAATGCGAGAAGACAAAGT+AGG + chr1.2:52644456-52644475 MS.gene038063:intron 35.0%
AAACATTCAAACATTTGCCG+AGG - chr1.2:52645312-52645331 None:intergenic 35.0%
AAACTGTTTCAGTGCAAATG+TGG + chr1.2:52645987-52646006 MS.gene038063:CDS 35.0%
AAAGAATGTTGGAGCAAATG+TGG + chr1.2:52643812-52643831 MS.gene038063:CDS 35.0%
AAATCTAGCAATGTTGCCAA+AGG - chr1.2:52644329-52644348 None:intergenic 35.0%
AACATAGGAAGACATAACCA+GGG + chr1.2:52644615-52644634 MS.gene038063:intron 35.0%
AGTAAAAGCAATGCTGTTGA+GGG - chr1.2:52643712-52643731 None:intergenic 35.0%
AGTCTACAGAAGATCGTATA+AGG + chr1.2:52643372-52643391 MS.gene038063:CDS 35.0%
ATAGTTCATTGAATACCAGG+GGG - chr1.2:52642053-52642072 None:intergenic 35.0%
ATATAACCAGGAAGAAGAGA+TGG + chr1.2:52641689-52641708 MS.gene038063:intron 35.0%
ATATGAAGCGATCAAACAGT+AGG + chr1.2:52646027-52646046 MS.gene038063:intron 35.0%
ATCAAGCATAGATGTGTCAA+AGG + chr1.2:52643076-52643095 MS.gene038063:CDS 35.0%
ATGTCAAGTTATGTATCTGC+AGG + chr1.2:52643996-52644015 MS.gene038063:intron 35.0%
CATTTCTCTATCTCGTATTG+GGG + chr1.2:52643535-52643554 MS.gene038063:CDS 35.0%
CGAAAGAACGATATGAAAAG+TGG - chr1.2:52642641-52642660 None:intergenic 35.0%
CGAGCAGATTCAACATTTAA+CGG - chr1.2:52641729-52641748 None:intergenic 35.0%
CGGAAATCACACATCAATAA+TGG - chr1.2:52646283-52646302 None:intergenic 35.0%
CTCATAATCTTCCTCATCAA+CGG - chr1.2:52642009-52642028 None:intergenic 35.0%
CTTATAGCTTATGCTCTGAT+TGG + chr1.2:52646216-52646235 MS.gene038063:intron 35.0%
GAAGAAGTCTCACATAGAAA+AGG + chr1.2:52641815-52641834 MS.gene038063:CDS 35.0%
GATAGATAAACAGTTATGCG+AGG - chr1.2:52645081-52645100 None:intergenic 35.0%
GATAGTTCATTGAATACCAG+GGG - chr1.2:52642054-52642073 None:intergenic 35.0%
GATGTTAGTGACCTTACAAA+AGG + chr1.2:52643404-52643423 MS.gene038063:CDS 35.0%
GCTTGCTTGCATATTGTTTA+TGG - chr1.2:52642490-52642509 None:intergenic 35.0%
GGATAGTTCATTGAATACCA+GGG - chr1.2:52642055-52642074 None:intergenic 35.0%
GTGCCTGTACATATAAAACT+GGG + chr1.2:52643612-52643631 MS.gene038063:CDS 35.0%
TAAAAACTGGCAACTTATCG+AGG + chr1.2:52641393-52641412 MS.gene038063:CDS 35.0%
TAGCAACGATTAACACAGTT+GGG + chr1.2:52645732-52645751 MS.gene038063:intron 35.0%
TCAAACGATAACTCACAAGA+AGG + chr1.2:52643041-52643060 MS.gene038063:CDS 35.0%
TCATAATCTTCCTCATCAAC+GGG - chr1.2:52642008-52642027 None:intergenic 35.0%
TCTATGTGAGACTTCTTCAA+CGG - chr1.2:52641813-52641832 None:intergenic 35.0%
TGAGTTTGAATCACAATCCA+TGG - chr1.2:52642197-52642216 None:intergenic 35.0%
TGCATAAGATACTCTATGGT+AGG + chr1.2:52642540-52642559 MS.gene038063:intron 35.0%
TGCATTCTAACATCACTTTG+TGG - chr1.2:52643296-52643315 None:intergenic 35.0%
TGCCTGTACATATAAAACTG+GGG + chr1.2:52643613-52643632 MS.gene038063:CDS 35.0%
TGGAATAACATACAACTTGC+AGG + chr1.2:52643871-52643890 MS.gene038063:CDS 35.0%
TGTGCCTGTACATATAAAAC+TGG + chr1.2:52643611-52643630 MS.gene038063:CDS 35.0%
TGTTGTTACACTAATCTGTG+TGG + chr1.2:52645494-52645513 MS.gene038063:intron 35.0%
TTACGTATGAGCATAGTTTG+AGG - chr1.2:52644945-52644964 None:intergenic 35.0%
TTAGCAACGATTAACACAGT+TGG + chr1.2:52645731-52645750 MS.gene038063:intron 35.0%
TTATACGATCTTCTGTAGAC+TGG - chr1.2:52643373-52643392 None:intergenic 35.0%
TTCCTGAAGCAAAAGTGAAA+CGG + chr1.2:52641341-52641360 MS.gene038063:CDS 35.0%
TTGATGAGGAAGATTATGAG+CGG + chr1.2:52642009-52642028 MS.gene038063:CDS 35.0%
TTGGGATTCAACATTTGTGA+AGG + chr1.2:52644273-52644292 MS.gene038063:CDS 35.0%
! ACAACTTCTAAAGATGATGG+AGG + chr1.2:52642920-52642939 MS.gene038063:CDS 35.0%
! ACTTTGTTGTAGAACTTGAG+AGG + chr1.2:52646158-52646177 MS.gene038063:intron 35.0%
! ATCGACCCAAATTTTTCTGT+CGG + chr1.2:52642969-52642988 MS.gene038063:CDS 35.0%
! GTCAATTCATAAGAAGCATG+TGG - chr1.2:52641969-52641988 None:intergenic 35.0%
! TAGGTATTTTTCACATCCGA+AGG + chr1.2:52644094-52644113 MS.gene038063:intron 35.0%
! TTTTTCACATCCGAAGGAAA+AGG + chr1.2:52644100-52644119 MS.gene038063:CDS 35.0%
!! AATGGTGTTACTGAAAAGCA+AGG + chr1.2:52642744-52642763 MS.gene038063:CDS 35.0%
!! CTATGTTTCTGGTGGTAAAA+AGG - chr1.2:52645567-52645586 None:intergenic 35.0%
!!! TTTTGGGGTATGTAGTTGAA+AGG - chr1.2:52643488-52643507 None:intergenic 35.0%
AACATTTAACGGAGCTTCCT+CGG - chr1.2:52641718-52641737 None:intergenic 40.0%
AAGGAAGGTAAATCAGCTCA+AGG - chr1.2:52645052-52645071 None:intergenic 40.0%
AAGTGATGTTAGAATGCAGC+CGG + chr1.2:52643298-52643317 MS.gene038063:CDS 40.0%
ACTAGGTCTGCGTTAATTTC+TGG + chr1.2:52646334-52646353 MS.gene038063:CDS 40.0%
ACTGAGTGAATTTGGAGACA+CGG - chr1.2:52643330-52643349 None:intergenic 40.0%
AGAAATTAACGCAGACCTAG+TGG - chr1.2:52646335-52646354 None:intergenic 40.0%
AGATGTGTCAAAGGAATCAG+AGG + chr1.2:52643085-52643104 MS.gene038063:CDS 40.0%
AGGGAAAACAGAGAAATAGG+AGG + chr1.2:52644412-52644431 MS.gene038063:intron 40.0%
AGTTGTATGTTATTCCACGC+TGG - chr1.2:52643868-52643887 None:intergenic 40.0%
ATCAATAATGGCGAAAGTGG+TGG - chr1.2:52646271-52646290 None:intergenic 40.0%
ATCATCCAAACTGCTCTGAT+GGG - chr1.2:52643234-52643253 None:intergenic 40.0%
ATCCAATTTGACATGTGTCG+TGG - chr1.2:52646115-52646134 None:intergenic 40.0%
ATCTACTTACCCTGTTCTAC+TGG + chr1.2:52644243-52644262 MS.gene038063:CDS 40.0%
ATGCAGAACCATCAAGCTTA+AGG + chr1.2:52642706-52642725 MS.gene038063:intron 40.0%
CAACATAGGAAGACATAACC+AGG + chr1.2:52644614-52644633 MS.gene038063:intron 40.0%
CAAGATGCAACTTCCTATAC+AGG - chr1.2:52643576-52643595 None:intergenic 40.0%
CACATCAATAATGGCGAAAG+TGG - chr1.2:52646274-52646293 None:intergenic 40.0%
CAGATGTTCTGATGCAAACT+TGG + chr1.2:52645373-52645392 MS.gene038063:intron 40.0%
CAGTAAAAGCAATGCTGTTG+AGG - chr1.2:52643713-52643732 None:intergenic 40.0%
CAGTGTCATCTGATGTGAAT+GGG + chr1.2:52641883-52641902 MS.gene038063:CDS 40.0%
CCACTTCTTTACGTGTGTTA+TGG - chr1.2:52642797-52642816 None:intergenic 40.0%
CCATAACACACGTAAAGAAG+TGG + chr1.2:52642794-52642813 MS.gene038063:CDS 40.0%
CCATTAAAGAGTTGCATGAG+AGG + chr1.2:52644194-52644213 MS.gene038063:CDS 40.0%
CCTCTCATGCAACTCTTTAA+TGG - chr1.2:52644197-52644216 None:intergenic 40.0%
CTATGTGAGACTTCTTCAAC+GGG - chr1.2:52641812-52641831 None:intergenic 40.0%
CTCTTCAAGTGTCCTTTACA+TGG - chr1.2:52643782-52643801 None:intergenic 40.0%
CTGGACACTCAATCTGAATT+GGG - chr1.2:52645406-52645425 None:intergenic 40.0%
CTGGTTATGTCTTCCTATGT+TGG - chr1.2:52644616-52644635 None:intergenic 40.0%
CTTGAAAGGTCAAAGAGTGA+TGG + chr1.2:52643746-52643765 MS.gene038063:CDS 40.0%
GCAAAGATTGTCCACTTGAA+AGG + chr1.2:52643732-52643751 MS.gene038063:CDS 40.0%
GCACCCTAAAATTCAAGCTA+GGG + chr1.2:52644393-52644412 MS.gene038063:intron 40.0%
GCCTGTACATATAAAACTGG+GGG + chr1.2:52643614-52643633 MS.gene038063:CDS 40.0%
GCTAGGGAAAACAGAGAAAT+AGG + chr1.2:52644409-52644428 MS.gene038063:intron 40.0%
GGGATAGTTCATTGAATACC+AGG - chr1.2:52642056-52642075 None:intergenic 40.0%
GTCAAAGAGTGATGGTTGTT+TGG + chr1.2:52643754-52643773 MS.gene038063:CDS 40.0%
TACAGCTCAAGGCCTAATTA+AGG + chr1.2:52643649-52643668 MS.gene038063:CDS 40.0%
TATGTGAGACTTCTTCAACG+GGG - chr1.2:52641811-52641830 None:intergenic 40.0%
TCAAAGGAATCAGAGGTTGA+TGG + chr1.2:52643092-52643111 MS.gene038063:CDS 40.0%
TCACTCTTTGACCTTTCAAG+TGG - chr1.2:52643746-52643765 None:intergenic 40.0%
TCATAACTAGCATCTCGCAT+GGG - chr1.2:52641924-52641943 None:intergenic 40.0%
TCCTGAAGCAAAAGTGAAAC+GGG + chr1.2:52641342-52641361 MS.gene038063:CDS 40.0%
TCTGGACACTCAATCTGAAT+TGG - chr1.2:52645407-52645426 None:intergenic 40.0%
TTACGTGTGTTATGGTGTGA+TGG - chr1.2:52642789-52642808 None:intergenic 40.0%
TTGCACTGAAACAGTTTGAC+AGG - chr1.2:52645984-52646003 None:intergenic 40.0%
TTGTCAGCTGAAACTGATAG+AGG + chr1.2:52642435-52642454 MS.gene038063:intron 40.0%
! ATCTCGGAACACAAGGTTTT+GGG - chr1.2:52643504-52643523 None:intergenic 40.0%
! GAGGCAACTTATTTGCCTTT+TGG + chr1.2:52646177-52646196 MS.gene038063:intron 40.0%
! GGTTGTTTGGAACCATGTAA+AGG + chr1.2:52643767-52643786 MS.gene038063:CDS 40.0%
! TCACACACAAATGCTCCTTT+TGG - chr1.2:52644154-52644173 None:intergenic 40.0%
! TGAAGAAGGCGATGATTTTG+AGG + chr1.2:52641450-52641469 MS.gene038063:CDS 40.0%
!! ACAGTTTGACAGGTTGATCA+TGG - chr1.2:52645974-52645993 None:intergenic 40.0%
!! GGCACTGCTTGTATTTTAGA+AGG + chr1.2:52642561-52642580 MS.gene038063:intron 40.0%
AAACTCTGTCATTGCCTGGA+GGG - chr1.2:52641317-52641336 None:intergenic 45.0%
AATGTGGCAGTAAGTTCTGC+AGG + chr1.2:52646003-52646022 MS.gene038063:CDS 45.0%
ACATCCGAAGGAAAAGGATG+GGG + chr1.2:52644106-52644125 MS.gene038063:CDS 45.0%
ACCTTAGAGGAACTGCCAAA+AGG + chr1.2:52644136-52644155 MS.gene038063:CDS 45.0%
ACGGGTTCTCACTCATCAAA+TGG + chr1.2:52643149-52643168 MS.gene038063:CDS 45.0%
ACTTCTGCCAAATAGTGCCT+CGG + chr1.2:52645292-52645311 MS.gene038063:intron 45.0%
AGGCGCTATTCAAGGAAGAA+TGG + chr1.2:52642726-52642745 MS.gene038063:CDS 45.0%
ATAGGAAGACATAACCAGGG+AGG + chr1.2:52644618-52644637 MS.gene038063:intron 45.0%
ATGCGAGAAGACAAAGTAGG+AGG + chr1.2:52644459-52644478 MS.gene038063:intron 45.0%
CACATCCGAAGGAAAAGGAT+GGG + chr1.2:52644105-52644124 MS.gene038063:CDS 45.0%
CAGTTATGCGAGGCAAGTTA+AGG - chr1.2:52645071-52645090 None:intergenic 45.0%
CAGTTTGGATGATGCTGTAC+TGG + chr1.2:52643241-52643260 MS.gene038063:CDS 45.0%
CATCATCCAAACTGCTCTGA+TGG - chr1.2:52643235-52643254 None:intergenic 45.0%
CGAGATGCTAGTTATGACAG+GGG + chr1.2:52641927-52641946 MS.gene038063:CDS 45.0%
CTCACCTATTGTTTCAAGGC+TGG + chr1.2:52644371-52644390 MS.gene038063:intron 45.0%
CTGAGTGAATTTGGAGACAC+GGG - chr1.2:52643329-52643348 None:intergenic 45.0%
GAAAAGGACACAGCACTTGA+AGG + chr1.2:52641831-52641850 MS.gene038063:CDS 45.0%
GAATAGCGCCTTAAGCTTGA+TGG - chr1.2:52642717-52642736 None:intergenic 45.0%
GAGGACAGTTGTTCCTGTAT+AGG + chr1.2:52643560-52643579 MS.gene038063:CDS 45.0%
GCAGTGTCATCTGATGTGAA+TGG + chr1.2:52641882-52641901 MS.gene038063:CDS 45.0%
GCATTTGTGTGTGAGTTTGC+TGG + chr1.2:52644160-52644179 MS.gene038063:CDS 45.0%
GCCCAATCCAAAAATAGCAG+CGG + chr1.2:52641291-52641310 MS.gene038063:CDS 45.0%
GCGAGATGCTAGTTATGACA+GGG + chr1.2:52641926-52641945 MS.gene038063:CDS 45.0%
GGCACCCTAAAATTCAAGCT+AGG + chr1.2:52644392-52644411 MS.gene038063:intron 45.0%
GGTATGTAGTTGAAAGGTGG+TGG - chr1.2:52643482-52643501 None:intergenic 45.0%
GTCATAACTAGCATCTCGCA+TGG - chr1.2:52641925-52641944 None:intergenic 45.0%
GTCATCTGATGTGAATGGGA+GGG + chr1.2:52641887-52641906 MS.gene038063:CDS 45.0%
GTTGTTCTTGAGTAGGCATG+CGG - chr1.2:52642905-52642924 None:intergenic 45.0%
TAAATCTGAGCCCGTTGATG+AGG + chr1.2:52641995-52642014 MS.gene038063:CDS 45.0%
TAACCAGGAAGAAGAGATGG+AGG + chr1.2:52641692-52641711 MS.gene038063:intron 45.0%
TATGCGAGGCAAGTTAAGGA+AGG - chr1.2:52645067-52645086 None:intergenic 45.0%
TCACATCCGAAGGAAAAGGA+TGG + chr1.2:52644104-52644123 MS.gene038063:CDS 45.0%
TCCAGGCAATGACAGAGTTT+GGG + chr1.2:52641317-52641336 MS.gene038063:CDS 45.0%
TGCGAGATGCTAGTTATGAC+AGG + chr1.2:52641925-52641944 MS.gene038063:CDS 45.0%
TGGGGTATGTAGTTGAAAGG+TGG - chr1.2:52643485-52643504 None:intergenic 45.0%
TGTCATCTGATGTGAATGGG+AGG + chr1.2:52641886-52641905 MS.gene038063:CDS 45.0%
TTACCCTGTTCTACTGGATG+CGG + chr1.2:52644249-52644268 MS.gene038063:CDS 45.0%
TTCATGCGCTGCTATGTTTC+TGG - chr1.2:52645578-52645597 None:intergenic 45.0%
! AACGGGCTCAGATTTAGGTA+CGG - chr1.2:52641991-52642010 None:intergenic 45.0%
! AAGTCCCCATCCTTTTCCTT+CGG - chr1.2:52644113-52644132 None:intergenic 45.0%
! ACATTTGCCGAGGCACTATT+TGG - chr1.2:52645302-52645321 None:intergenic 45.0%
! CAAGCTTAAGGCGCTATTCA+AGG + chr1.2:52642718-52642737 MS.gene038063:CDS 45.0%
! CATCTCGGAACACAAGGTTT+TGG - chr1.2:52643505-52643524 None:intergenic 45.0%
! CTTTTGATGCAGGATCCACT+AGG + chr1.2:52646317-52646336 MS.gene038063:intron 45.0%
! GTTATGGTGTGATGGTGTCA+TGG - chr1.2:52642781-52642800 None:intergenic 45.0%
! TAAGAAGCATGTGGTGATGC+AGG - chr1.2:52641960-52641979 None:intergenic 45.0%
! TCATCAACGGGCTCAGATTT+AGG - chr1.2:52641996-52642015 None:intergenic 45.0%
! TCCTTTTGGCAGTTCCTCTA+AGG - chr1.2:52644140-52644159 None:intergenic 45.0%
! TCTCGGAACACAAGGTTTTG+GGG - chr1.2:52643503-52643522 None:intergenic 45.0%
! TCTTCTGTAGACTGGTGATG+TGG - chr1.2:52643365-52643384 None:intergenic 45.0%
!! GCCCCCAGTTTTATATGTAC+AGG - chr1.2:52643618-52643637 None:intergenic 45.0%
!! TGATGGTGTCATGGAGACAT+GGG - chr1.2:52642772-52642791 None:intergenic 45.0%
!!! GCCGCTGCTATTTTTGGATT+GGG - chr1.2:52641295-52641314 None:intergenic 45.0%
!!! GCTATTTTTGGATTGGGCCT+TGG - chr1.2:52641289-52641308 None:intergenic 45.0%
!! AAACAATAAAAATAATATTA+AGG - chr1.2:52642077-52642096 None:intergenic 5.0%
!! AACAATAAAAATAATATTAA+GGG - chr1.2:52642076-52642095 None:intergenic 5.0%
!!! AATATTATTTTTATTGTTTT+TGG + chr1.2:52642078-52642097 MS.gene038063:intron 5.0%
!!! CTAATTAATATTTTAAATTT+AGG + chr1.2:52644075-52644094 MS.gene038063:intron 5.0%
!!! TTAAAATAATTGTTATTAAA+TGG - chr1.2:52644975-52644994 None:intergenic 5.0%
AAGCCGCATCCAGTAGAACA+GGG - chr1.2:52644255-52644274 None:intergenic 50.0%
AAGGACACAGCACTTGAAGG+CGG + chr1.2:52641834-52641853 MS.gene038063:CDS 50.0%
AGCGCATGAAGAGCTCACTT+GGG + chr1.2:52645588-52645607 MS.gene038063:CDS 50.0%
AGCTGAAACTGATAGAGGCG+AGG + chr1.2:52642440-52642459 MS.gene038063:intron 50.0%
ATGGGGACTTCGTACCTTAG+AGG + chr1.2:52644123-52644142 MS.gene038063:CDS 50.0%
CAAACTCTGTCATTGCCTGG+AGG - chr1.2:52641318-52641337 None:intergenic 50.0%
CAAATCCTTACTGCCCCCAA+TGG - chr1.2:52643126-52643145 None:intergenic 50.0%
CAGACTCACCTGGTGGAAAA+AGG - chr1.2:52644912-52644931 None:intergenic 50.0%
CATTGGGGGCAGTAAGGATT+TGG + chr1.2:52643124-52643143 MS.gene038063:CDS 50.0%
CTCCAGGCAATGACAGAGTT+TGG + chr1.2:52641316-52641335 MS.gene038063:CDS 50.0%
GATCCTTTCACTGCTCAGCT+AGG - chr1.2:52645187-52645206 None:intergenic 50.0%
GGCAGTAAGGATTTGGACAC+GGG + chr1.2:52643131-52643150 MS.gene038063:CDS 50.0%
GGCCACGACACATGTCAAAT+TGG + chr1.2:52646110-52646129 MS.gene038063:intron 50.0%
GGGCAGTAAGGATTTGGACA+CGG + chr1.2:52643130-52643149 MS.gene038063:CDS 50.0%
GGTGCCAGCCTTGAAACAAT+AGG - chr1.2:52644378-52644397 None:intergenic 50.0%
GTGATAGCCTCTTCAGCTCA+GGG + chr1.2:52642828-52642847 MS.gene038063:CDS 50.0%
GTTGGAGCAAATGTGGCTGT+GGG + chr1.2:52643819-52643838 MS.gene038063:CDS 50.0%
TACTTCTCCCTGAGCTGAAG+AGG - chr1.2:52642838-52642857 None:intergenic 50.0%
TCCCAAACTCTGTCATTGCC+TGG - chr1.2:52641321-52641340 None:intergenic 50.0%
TCTATCTCGTATTGGGGCTG+AGG + chr1.2:52643541-52643560 MS.gene038063:CDS 50.0%
TCTCCTAGCTGAGCAGTGAA+AGG + chr1.2:52645181-52645200 MS.gene038063:intron 50.0%
TGAGTAGGCATGCGGAAATC+TGG - chr1.2:52642897-52642916 None:intergenic 50.0%
TGATGTTAGAATGCAGCCGG+AGG + chr1.2:52643301-52643320 MS.gene038063:CDS 50.0%
TGCTTAGATGCAGCGTCCTT+TGG + chr1.2:52644310-52644329 MS.gene038063:CDS 50.0%
TGTGATAGCCTCTTCAGCTC+AGG + chr1.2:52642827-52642846 MS.gene038063:CDS 50.0%
TGTGGCTGTGGGAAACAATG+TGG + chr1.2:52643830-52643849 MS.gene038063:CDS 50.0%
TGTTCTACTGGATGCGGCTT+GGG + chr1.2:52644255-52644274 MS.gene038063:CDS 50.0%
TGTTGGAGCAAATGTGGCTG+TGG + chr1.2:52643818-52643837 MS.gene038063:CDS 50.0%
! AGTGGTGGTGTCTGCATACA+TGG - chr1.2:52646256-52646275 None:intergenic 50.0%
! ATTTTTACCCCTCTCCCCTG+TGG + chr1.2:52641488-52641507 MS.gene038063:intron 50.0%
! GATGACACTGCGTTGTTTCG+AGG - chr1.2:52641873-52641892 None:intergenic 50.0%
! TTTGGGGTAGGGAGAGATCA+AGG - chr1.2:52645017-52645036 None:intergenic 50.0%
!! ATGCGCTGCTATGTTTCTGG+TGG - chr1.2:52645575-52645594 None:intergenic 50.0%
!! CAGAAGCATCTCGGAACACA+AGG - chr1.2:52643511-52643530 None:intergenic 50.0%
!! CTCTGATGGGCTGGTGAAAA+GGG - chr1.2:52643221-52643240 None:intergenic 50.0%
!! GCCCGTTTCACTTTTGCTTC+AGG - chr1.2:52641346-52641365 None:intergenic 50.0%
!! GTGATGGTGTCATGGAGACA+TGG - chr1.2:52642773-52642792 None:intergenic 50.0%
!! TCTGATGGGCTGGTGAAAAG+GGG - chr1.2:52643220-52643239 None:intergenic 50.0%
!!! GGCCGCTGCTATTTTTGGAT+TGG - chr1.2:52641296-52641315 None:intergenic 50.0%
AAAAATAGCAGCGGCCCTCC+AGG + chr1.2:52641300-52641319 MS.gene038063:CDS 55.0%
AACGGGGAAGAAGCTGAGCT+AGG - chr1.2:52641795-52641814 None:intergenic 55.0%
ACCAGCCCATCAGAGCAGTT+TGG + chr1.2:52643226-52643245 MS.gene038063:CDS 55.0%
ACCAGGGGGAACCATTGCAA+GGG - chr1.2:52642039-52642058 None:intergenic 55.0%
ACGGGGAAGAAGCTGAGCTA+GGG - chr1.2:52641794-52641813 None:intergenic 55.0%
ATCCATGCTGCAGACTCACC+TGG - chr1.2:52644922-52644941 None:intergenic 55.0%
ATCCTTACTGCCCCCAATGG+CGG - chr1.2:52643123-52643142 None:intergenic 55.0%
CAAGCCGCATCCAGTAGAAC+AGG - chr1.2:52644256-52644275 None:intergenic 55.0%
CACACACACGCACCCAACTA+TGG + chr1.2:52642221-52642240 MS.gene038063:intron 55.0%
CACCTGGTGGAAAAAGGCTC+CGG - chr1.2:52644906-52644925 None:intergenic 55.0%
CAGCGCATGAAGAGCTCACT+TGG + chr1.2:52645587-52645606 MS.gene038063:CDS 55.0%
CTGTTCTACTGGATGCGGCT+TGG + chr1.2:52644254-52644273 MS.gene038063:CDS 55.0%
GGAAATCGCGTTATCCAGCG+TGG + chr1.2:52643851-52643870 MS.gene038063:CDS 55.0%
TACCAGGGGGAACCATTGCA+AGG - chr1.2:52642040-52642059 None:intergenic 55.0%
TCTGCCTTGGTTTCACCTCG+AGG + chr1.2:52643194-52643213 MS.gene038063:CDS 55.0%
TTTGGAGACACGGGATCCTC+CGG - chr1.2:52643320-52643339 None:intergenic 55.0%
! GTTGTTTCGAGGCTGCTGTG+AGG - chr1.2:52641862-52641881 None:intergenic 55.0%
! TCCAAACTGCTCTGATGGGC+TGG - chr1.2:52643230-52643249 None:intergenic 55.0%
! TTGATGGCACACCCGCCATT+GGG + chr1.2:52643108-52643127 MS.gene038063:CDS 55.0%
!! GCTCTGATGGGCTGGTGAAA+AGG - chr1.2:52643222-52643241 None:intergenic 55.0%
!!! TGGAGGGCCGCTGCTATTTT+TGG - chr1.2:52641301-52641320 None:intergenic 55.0%
AGCTGCAGCTCAGCTCTCCA+GGG + chr1.2:52642870-52642889 MS.gene038063:CDS 60.0%
CACCAGGTGAGTCTGCAGCA+TGG + chr1.2:52644917-52644936 MS.gene038063:intron 60.0%
CATGCTGCAGACTCACCTGG+TGG - chr1.2:52644919-52644938 None:intergenic 60.0%
CCAGGGGGAACCATTGCAAG+GGG - chr1.2:52642038-52642057 None:intergenic 60.0%
CGGCCTCCATCTCTTCTTCC+TGG - chr1.2:52641698-52641717 None:intergenic 60.0%
CGGGGAAGAAGCTGAGCTAG+GGG - chr1.2:52641793-52641812 None:intergenic 60.0%
GCATGCGGAAATCTGGTCCC+TGG - chr1.2:52642890-52642909 None:intergenic 60.0%
GGAAGAAGAGATGGAGGCCG+AGG + chr1.2:52641698-52641717 MS.gene038063:intron 60.0%
TCCTTACTGCCCCCAATGGC+GGG - chr1.2:52643122-52643141 None:intergenic 60.0%
TGATGGCACACCCGCCATTG+GGG + chr1.2:52643109-52643128 MS.gene038063:CDS 60.0%
! AGCCGGAGCCTTTTTCCACC+AGG + chr1.2:52644901-52644920 MS.gene038063:intron 60.0%
!! GTTGATGGCACACCCGCCAT+TGG + chr1.2:52643107-52643126 MS.gene038063:CDS 60.0%
ACCCGCCATTGGGGGCAGTA+AGG + chr1.2:52643118-52643137 MS.gene038063:CDS 65.0%
CAGTGTGTGCGCAGCCACAG+GGG - chr1.2:52641505-52641524 None:intergenic 65.0%
CCCCTTGCAATGGTTCCCCC+TGG + chr1.2:52642035-52642054 MS.gene038063:CDS 65.0%
GAGCTGCAGCTCAGCTCTCC+AGG + chr1.2:52642869-52642888 MS.gene038063:CDS 65.0%
GATGGCACACCCGCCATTGG+GGG + chr1.2:52643110-52643129 MS.gene038063:CDS 65.0%
GCAGTGTGTGCGCAGCCACA+GGG - chr1.2:52641506-52641525 None:intergenic 65.0%
GCTGGTGAAAAGGGGCCTCG+AGG - chr1.2:52643212-52643231 None:intergenic 65.0%
GGGGCCTCGAGGTGAAACCA+AGG - chr1.2:52643201-52643220 None:intergenic 65.0%
TGAGCGGCGTCCCCTTGCAA+TGG + chr1.2:52642025-52642044 MS.gene038063:CDS 65.0%
TGCAGTGTGTGCGCAGCCAC+AGG - chr1.2:52641507-52641526 None:intergenic 65.0%
GTGCGCAGCCACAGGGGAGA+GGG - chr1.2:52641499-52641518 None:intergenic 70.0%
TGCGCAGCCACAGGGGAGAG+GGG - chr1.2:52641498-52641517 None:intergenic 70.0%
TGTGCGCAGCCACAGGGGAG+AGG - chr1.2:52641500-52641519 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 52641280 52646360 52641280 ID=MS.gene038063
chr1.2 mRNA 52641280 52646360 52641280 ID=MS.gene038063.t1;Parent=MS.gene038063
chr1.2 exon 52641280 52641471 52641280 ID=MS.gene038063.t1.exon1;Parent=MS.gene038063.t1
chr1.2 CDS 52641280 52641471 52641280 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52641560 52641595 52641560 ID=MS.gene038063.t1.exon2;Parent=MS.gene038063.t1
chr1.2 CDS 52641560 52641595 52641560 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52641699 52642056 52641699 ID=MS.gene038063.t1.exon3;Parent=MS.gene038063.t1
chr1.2 CDS 52641699 52642056 52641699 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52642712 52643892 52642712 ID=MS.gene038063.t1.exon4;Parent=MS.gene038063.t1
chr1.2 CDS 52642712 52643892 52642712 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52644097 52644359 52644097 ID=MS.gene038063.t1.exon5;Parent=MS.gene038063.t1
chr1.2 CDS 52644097 52644359 52644097 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52645376 52645442 52645376 ID=MS.gene038063.t1.exon6;Parent=MS.gene038063.t1
chr1.2 CDS 52645376 52645442 52645376 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52645559 52645609 52645559 ID=MS.gene038063.t1.exon7;Parent=MS.gene038063.t1
chr1.2 CDS 52645559 52645609 52645559 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52645948 52646044 52645948 ID=MS.gene038063.t1.exon8;Parent=MS.gene038063.t1
chr1.2 CDS 52645948 52646044 52645948 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
chr1.2 exon 52646329 52646360 52646329 ID=MS.gene038063.t1.exon9;Parent=MS.gene038063.t1
chr1.2 CDS 52646329 52646360 52646329 ID=cds.MS.gene038063.t1;Parent=MS.gene038063.t1
Gene Sequence

>MS.gene038063

ATGGCGCCAAGGCCCAATCCAAAAATAGCAGCGGCCCTCCAGGCAATGACAGAGTTTGGGATTCCTGAAGCAAAAGTGAAACGGGCGCTAAAGAAACTCCTTAAGTTGTTTGATAAAAACTGGCAACTTATCGAGGAAGAGAACTATAGAGCTTTATTGGATGCTATATTTGAAGAAGGCGATGATTTTGAGGTGTTTTTCTCGCTTTATTTTTACCCCTCTCCCCTGTGGCTGCGCACACACTGCAAACTTACTTCTATTGTTGGATTTTATTTGACAGGAGCCAGAACCACAAAAGAAAAACAAGAGAGTGAATGTACGTAACATTCATAATTTTCTGTTGGCAACTTATCTGCATTACTTTATCGATTTTATGTCTATAGCTGCTGAATATGTATTCTGCATTTTCATATAACCAGGAAGAAGAGATGGAGGCCGAGGAAGCTCCGTTAAATGTTGAATCTGCTCGACCTTTGAAAAGATTGAGATTAAGAGGACAAGAGAACAATTCCCCTAGCTCAGCTTCTTCCCCGTTGAAGAAGTCTCACATAGAAAAGGACACAGCACTTGAAGGCGGCTCCTCACAGCAGCCTCGAAACAACGCAGTGTCATCTGATGTGAATGGGAGGGTTGCAGCACGTCCCATGCGAGATGCTAGTTATGACAGGGGAAAGCAACCTGCATCACCACATGCTTCTTATGAATTGACCGTACCTAAATCTGAGCCCGTTGATGAGGAAGATTATGAGCGGCGTCCCCTTGCAATGGTTCCCCCTGGTATTCAATGAACTATCCCTTAATATTATTTTTATTGTTTTTGGCATCTTAGTTGTAATTGGCATGTTTGGATTATAATTTGCAAACTTTGATTTAATTTATCAGAAAAGTAACTTTGTTTTATTCTTCTTTTCAAACCATGGATTGTGATTCAAACTCATGCTCACACACACGCACCCAACTATGGTTTTGCTAAATGTATTATTTGTGGATGGAACTATGTGATGTATCTGATTGCTAGTACGATAAGATAGATGTATACATCTTACAAAATACAGATACAGAACTTTATTGTCAGAGTACTTGAAAAGAATAAAGTCAATGCACGAATTATTAGTTTAACTGCTTTTGACACTACCATTGCATAATTGCATCATGTTGTCAGCTGAAACTGATAGAGGCGAGGCACATTGATCATATGCACTATTTTCCATAAACAATATGCAAGCAAGCCTTTACTGATTTATGAGTTTCTAGAAAGTTTGCATAAGATACTCTATGGTAGGCACTGCTTGTATTTTAGAAGGCAGAGTTTGACCTCTGAATCTGACCAATTATTTTTCTTTTTCAACATTGTTTTGCCACTTTTCATATCGTTCTTTCGTTGCATGTTAACATTCATCTTGTAAAGATATATATATTTTTTTAAATGCAGAACCATCAAGCTTAAGGCGCTATTCAAGGAAGAATGGTGTTACTGAAAAGCAAGGTGCCCATGTCTCCATGACACCATCACACCATAACACACGTAAAGAAGTGGTTTCTGATGTTGTGATAGCCTCTTCAGCTCAGGGAGAAGTAAAACTTTCTCTGAGCTGCAGCTCAGCTCTCCAGGGACCAGATTTCCGCATGCCTACTCAAGAACAACTTCTAAAGATGATGGAGGATAAATGTCTGCGATCATATAAAATCATCGACCCAAATTTTTCTGTCGGAAAAATGTTGAGAGATATATGTGATTGCATGTTGGAATTTAGTACTGATTCAAACGATAACTCACAAGAAGGTTCAATGTCAAAATCAAGCATAGATGTGTCAAAGGAATCAGAGGTTGATGGCACACCCGCCATTGGGGGCAGTAAGGATTTGGACACGGGTTCTCACTCATCAAATGGATCAATCCAAGTTAATTCTTTTTCTGCCTTGGTTTCACCTCGAGGCCCCTTTTCACCAGCCCATCAGAGCAGTTTGGATGATGCTGTACTGGTTTCCGAGATGAACAGAACAATTGATATTCCACAAAGTGATGTTAGAATGCAGCCGGAGGATCCCGTGTCTCCAAATTCACTCAGTTTAGTAGTTGTTCCACATCACCAGTCTACAGAAGATCGTATAAGGTCTTATCATGATGTTAGTGACCTTACAAAAGGAGAAGAGAATAATCAAATTTCATGGGTGAATGAATCATCTACTAACGACTTTCCACCACCTTTCAACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTCTGTTAACATTTCTCTATCTCGTATTGGGGCTGAGGACAGTTGTTCCTGTATAGGAAGTTGCATCTTGTTGTCAGACACACATTGTGCCTGTACATATAAAACTGGGGGCAAATTTGCATATACAGCTCAAGGCCTAATTAAGGAAGAATTTTTGGAAGAGTGTATTGCTATCAGTCACAACCCTCAACAGCATTGCTTTTACTGCAAAGATTGTCCACTTGAAAGGTCAAAGAGTGATGGTTGTTTGGAACCATGTAAAGGACACTTGAAGAGAAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAATGTGGAAATCGCGTTATCCAGCGTGGAATAACATACAACTTGCAGGTGAGTGTTTCAGTAATCTCTGCCACTAGTAAACAAATACATTTTCTCCAATATTGATTCATAATTTTTATTAAAAAGTTCTTACACGTTGAATTTATTGTTTATGTCAAGTTATGTATCTGCAGGTCCAAGTTCCTATGTATTATAATGTTATTCCCCAGTACATTTTTAAAATGTTTTCTCTAATTAATATTTTAAATTTAGGTATTTTTCACATCCGAAGGAAAAGGATGGGGACTTCGTACCTTAGAGGAACTGCCAAAAGGAGCATTTGTGTGTGAGTTTGCTGGAGAAATTTTAACCATTAAAGAGTTGCATGAGAGGAACATGAAATGTGCTGAAAATGGGAAATCTACTTACCCTGTTCTACTGGATGCGGCTTGGGATTCAACATTTGTGAAGGATGAAGAAGCTCTATGCTTAGATGCAGCGTCCTTTGGCAACATTGCTAGATTTATCAATCACAGGTATTGAATTTCTCACCTATTGTTTCAAGGCTGGCACCCTAAAATTCAAGCTAGGGAAAACAGAGAAATAGGAGGACATAACAATTGATATCTGGAAAAATGCGAGAAGACAAAGTAGGAGGACATAACCATTGATATTCAGAAAAAAAATGGAGGATATAGTTGGGACCCTATTACTTGTTTGCACTTTTCATTGATAAGACAGTATTCATTTTTCATAGTTTATACTATAATTGTTTTTAATATGAGATTACCAACATAGGAAGACATAACCAGGGAGGAAAATTTAATCATACAGACTATGCATCTAGAAAAAAAAGAAGATATTGGGATGTTTCATCAAAGTTTGTATGTATTTATAATATTATAGGAATAAGAAAAATAGCTTGAGTTTAATGTGGTTGTAGTTCATATTGTTTTAAACACGTGCACTTCTAATTATAAACATCCGAAGAGAAAAGAATTTTTTTTATGTAATTGTCATGATCGAGAAATAATTAGTTCATCATAAATTAAAATACGTATTACAATGTTCAAAATGAGCCGGAGCCTTTTTCCACCAGGTGAGTCTGCAGCATGGATCCTCAAACTATGCTCATACGTAATGATAGACCATTTAATAACAATTATTTTAATCGTTTGAACTACACTTCTCCTTGATCTCTCCCTACCCCAAACTGTTTAAATATCCTTGAGCTGATTTACCTTCCTTAACTTGCCTCGCATAACTGTTTATCTATCGCAATATTCCCATCTTTATAAAACTGGGCTTACTTTCTTGTATGCTATTTTTATACATTCAACTCAAATATTATTACTTATCTCCTAGCTGAGCAGTGAAAGGATCAATCTTTGTTTCATTTGCATGCTTCTAATGGTTGATTGTGTATTCAGATGATTCAATACTTATGACTGTGTTATGTTAACTCTTGACTTCTGCCAAATAGTGCCTCGGCAAATGTTTGAATGTTTTTTGGTTATTTAGGAGATTTTGTAATAACTATTTAATTTTTCAGATGTTCTGATGCAAACTTGGTTGAAATCCCAATTCAGATTGAGTGTCCAGATCATTACTACTATCATGTGAGAAGCTACCTAATCCTTGAAGTCTGAAAAACTGTTTTACTTGCCTTTTGTTGTTACACTAATCTGTGTGGCAATTTTGCTTACCAATGCTTTTGATGTTTTACAATTTGCAGTTCGCCCTTTTTACCACCAGAAACATAGCAGCGCATGAAGAGCTCACTTGGGTAAGTTTTGTTATGTAATATGGTTTTTCATGAAATTTTCTACACTTGGGTCCTCCTATATTGTATAAAATTTTCACTTCTTTATGGTGCTTACTAATTACTCTTTTTAAGTATGAACAACTTAGCAACGATTAACACAGTTGGGATAATTTATTTACGGCTAAACTTATTTTCTAGTTTTTCATGGCTACTTAATTGAGAAATGCTTATGTACTTTGAGTGGATAGCAGACCATTTAGTAAGATTATACTGAGGAGTGCCTGTTCATTTTTGTAGTTTACTTTCTTCAAATCATTTCATTAATCTATAATCAACTTATTTTTATTTTGTTTCTGCAGGATTATGGCATTGACTTTGACGACCATGATCAACCTGTCAAACTGTTTCAGTGCAAATGTGGCAGTAAGTTCTGCAGGAATATGAAGCGATCAAACAGTAGGTTCAATTTCTCAAACAGCCTGTTTTACTTAATCTTTTGCTGGATTGATAGTTGTTGAAAAGGCCACGACACATGTCAAATTGGATTTTTTAATTTTTAAATTTAATTTACTTTGTTGTAGAACTTGAGAGGCAACTTATTTGCCTTTTGGATTGTTTAATAATGCGCTTATAGCTTATGCTCTGATTGGTTTCAATTCACGCACCATGTATGCAGACACCACCACTTTCGCCATTATTGATGTGTGATTTCCGTATTTAATTTTACTCTTTTGATGCAGGATCCACTAGGTCTGCGTTAATTTCTGGATGA
Protein sequence

>MS.gene038063.t1

MAPRPNPKIAAALQAMTEFGIPEAKVKRALKKLLKLFDKNWQLIEEENYRALLDAIFEEGDDFEEPEPQKKNKRVNEEEMEAEEAPLNVESARPLKRLRLRGQENNSPSSASSPLKKSHIEKDTALEGGSSQQPRNNAVSSDVNGRVAARPMRDASYDRGKQPASPHASYELTVPKSEPVDEEDYERRPLAMVPPEPSSLRRYSRKNGVTEKQGAHVSMTPSHHNTRKEVVSDVVIASSAQGEVKLSLSCSSALQGPDFRMPTQEQLLKMMEDKCLRSYKIIDPNFSVGKMLRDICDCMLEFSTDSNDNSQEGSMSKSSIDVSKESEVDGTPAIGGSKDLDTGSHSSNGSIQVNSFSALVSPRGPFSPAHQSSLDDAVLVSEMNRTIDIPQSDVRMQPEDPVSPNSLSLVVVPHHQSTEDRIRSYHDVSDLTKGEENNQISWVNESSTNDFPPPFNYIPQNLVFRDASVNISLSRIGAEDSCSCIGSCILLSDTHCACTYKTGGKFAYTAQGLIKEEFLEECIAISHNPQQHCFYCKDCPLERSKSDGCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITYNLQVFFTSEGKGWGLRTLEELPKGAFVCEFAGEILTIKELHERNMKCAENGKSTYPVLLDAAWDSTFVKDEEALCLDAASFGNIARFINHRCSDANLVEIPIQIECPDHYYYHFALFTTRNIAAHEELTWDYGIDFDDHDQPVKLFQCKCGSKFCRNMKRSNRSTRSALISG