AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052394

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052394.t1 MTR_7g098390 95.035 705 33 2 1 704 1 704 0.0 1332
MS.gene052394.t1 MTR_1g069570 51.036 772 280 17 3 704 5 748 0.0 665
MS.gene052394.t1 MTR_1g069570 48.645 701 262 17 3 633 5 677 0.0 541
MS.gene052394.t1 MTR_1g080340 58.176 318 130 2 388 702 269 586 7.04e-137 415
MS.gene052394.t1 MTR_1g080340 38.261 115 71 0 1 115 1 115 3.58e-16 82.8
MS.gene052394.t1 MTR_8g106570 49.751 201 79 3 388 585 118 299 8.72e-62 209
MS.gene052394.t1 MTR_1g064770 71.429 70 20 0 509 578 22 91 3.21e-32 120
MS.gene052394.t1 MTR_5g013420 27.647 340 166 9 380 697 803 1084 1.06e-30 129
MS.gene052394.t1 MTR_5g013420 27.647 340 166 9 380 697 803 1084 1.09e-30 129
MS.gene052394.t1 MTR_7g088370 31.329 316 162 9 388 698 436 701 3.49e-29 124
MS.gene052394.t1 MTR_8g042750 28.655 342 170 11 384 700 394 686 8.02e-28 119
MS.gene052394.t1 MTR_4g010830 27.826 345 159 13 380 697 694 975 3.60e-27 118
MS.gene052394.t1 MTR_7g052480 28.443 334 165 10 388 698 270 552 5.06e-27 116
MS.gene052394.t1 MTR_3g011440 27.795 331 173 7 388 698 376 660 7.51e-27 116
MS.gene052394.t1 MTR_8g078505 38.608 158 94 3 517 674 361 515 7.43e-26 112
MS.gene052394.t1 MTR_8g078490 36.757 185 108 5 517 699 1073 1250 1.41e-24 110
MS.gene052394.t1 MTR_5g018850 36.066 183 110 4 517 698 1327 1503 3.86e-24 109
MS.gene052394.t1 MTR_4g132610 36.413 184 108 5 517 698 867 1043 4.61e-22 102
MS.gene052394.t1 MTR_4g010550 26.300 327 167 8 381 697 197 459 1.98e-21 98.6
MS.gene052394.t1 MTR_7g084090 29.499 339 161 12 387 698 466 753 2.76e-21 99.4
MS.gene052394.t1 MTR_6g061270 33.654 208 109 7 515 698 488 690 8.38e-20 94.7
MS.gene052394.t1 MTR_1g035420 26.074 326 155 15 388 690 396 658 1.99e-17 87.0
MS.gene052394.t1 MTR_6g027690 34.161 161 98 4 519 675 241 397 2.17e-17 85.5
MS.gene052394.t1 MTR_6g061200 29.102 323 152 15 388 698 404 661 5.85e-17 85.5
MS.gene052394.t1 MTR_1g048950 28.571 322 159 12 380 697 274 528 6.96e-17 85.1
MS.gene052394.t1 MTR_8g070070 25.157 318 164 12 377 676 496 757 1.35e-16 84.3
MS.gene052394.t1 MTR_3g088625 32.178 202 102 9 504 698 1288 1461 4.76e-16 83.2
MS.gene052394.t1 MTR_3g088625 32.178 202 102 9 504 698 1182 1355 5.27e-16 83.2
MS.gene052394.t1 MTR_8g070075 24.759 311 160 12 384 676 496 750 1.09e-15 81.6
MS.gene052394.t1 MTR_6g044690 24.299 321 165 13 379 677 301 565 2.60e-15 80.1
MS.gene052394.t1 MTR_6g043960 29.444 180 104 6 515 677 310 483 1.00e-14 77.8
MS.gene052394.t1 MTR_7g445710 30.918 207 108 9 524 697 334 538 2.08e-13 73.9
MS.gene052394.t1 MTR_7g445600 32.593 135 64 3 540 674 248 355 1.28e-12 70.5
MS.gene052394.t1 MTR_7g450730 29.412 187 111 6 524 697 322 500 2.42e-12 70.5
MS.gene052394.t1 MTR_7g445530 32.044 181 91 8 524 674 334 512 1.22e-11 68.2
MS.gene052394.t1 MTR_1g098370 28.324 173 104 5 525 697 81 233 4.23e-11 66.2
MS.gene052394.t1 MTR_1g098000 28.324 173 104 5 525 697 78 230 7.02e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052394.t1 AT5G43990 39.062 768 340 22 1 702 1 706 2.14e-149 451
MS.gene052394.t1 AT5G43990 39.062 768 340 22 1 702 1 706 2.14e-149 451
MS.gene052394.t1 AT5G43990 39.062 768 340 22 1 702 1 706 2.14e-149 451
MS.gene052394.t1 AT5G43990 39.062 768 340 22 1 702 1 706 2.14e-149 451
MS.gene052394.t1 AT5G43990 39.062 768 340 22 1 702 24 729 4.66e-149 451
MS.gene052394.t1 AT5G43990 39.062 768 340 22 1 702 24 729 4.66e-149 451
MS.gene052394.t1 AT3G04380 54.890 317 139 3 388 701 119 434 4.52e-130 393
MS.gene052394.t1 AT3G04380 54.890 317 139 3 388 701 130 445 4.93e-130 393
MS.gene052394.t1 AT3G04380 54.890 317 139 3 388 701 146 461 4.97e-130 394
MS.gene052394.t1 AT3G04380 54.890 317 139 3 388 701 119 434 8.09e-130 392
MS.gene052394.t1 AT3G04380 54.890 317 139 3 388 701 146 461 9.69e-130 393
MS.gene052394.t1 AT3G04380 54.890 317 139 3 388 701 103 418 1.24e-129 391
MS.gene052394.t1 AT5G43990 50.505 396 170 9 311 702 244 617 3.89e-126 389
MS.gene052394.t1 AT5G43990 50.505 396 170 9 311 702 264 637 6.02e-126 389
MS.gene052394.t1 AT5G43990 50.505 396 170 9 311 702 264 637 6.02e-126 389
MS.gene052394.t1 AT5G43990 50.505 396 170 9 311 702 264 637 6.02e-126 389
MS.gene052394.t1 AT5G43990 50.505 396 170 9 311 702 264 637 6.02e-126 389
MS.gene052394.t1 AT5G43990 50.253 396 171 9 311 702 313 686 8.04e-126 390
MS.gene052394.t1 AT5G43990 45.000 140 50 2 1 120 1 133 2.02e-23 106
MS.gene052394.t1 AT5G43990 50.253 396 171 9 311 702 313 686 8.04e-126 390
MS.gene052394.t1 AT5G43990 45.000 140 50 2 1 120 1 133 2.02e-23 106
MS.gene052394.t1 AT5G43990 50.253 396 171 9 311 702 313 686 8.04e-126 390
MS.gene052394.t1 AT5G43990 45.000 140 50 2 1 120 1 133 2.02e-23 106
MS.gene052394.t1 AT5G43990 50.253 396 171 9 311 702 313 686 8.04e-126 390
MS.gene052394.t1 AT5G43990 45.000 140 50 2 1 120 1 133 2.02e-23 106
MS.gene052394.t1 AT5G43990 50.253 396 171 9 311 702 336 709 1.37e-125 390
MS.gene052394.t1 AT5G43990 45.000 140 50 2 1 120 24 156 1.91e-23 106
MS.gene052394.t1 AT5G43990 50.253 396 171 9 311 702 336 709 1.37e-125 390
MS.gene052394.t1 AT5G43990 45.000 140 50 2 1 120 24 156 1.91e-23 106
MS.gene052394.t1 AT1G04050 52.139 374 161 7 338 704 259 621 2.76e-125 386
MS.gene052394.t1 AT1G04050 52.139 374 161 7 338 704 363 725 1.22e-124 388
MS.gene052394.t1 AT1G04050 53.226 62 29 0 1 62 1 62 2.26e-12 70.9
MS.gene052394.t1 AT1G04050 52.139 374 161 7 338 704 363 725 1.22e-124 388
MS.gene052394.t1 AT1G04050 53.226 62 29 0 1 62 1 62 2.26e-12 70.9
MS.gene052394.t1 AT1G73100 30.060 336 170 11 380 698 378 665 3.01e-30 127
MS.gene052394.t1 AT5G04940 28.571 329 167 13 388 698 388 666 2.96e-27 118
MS.gene052394.t1 AT5G04940 28.571 329 167 13 388 698 388 666 2.96e-27 118
MS.gene052394.t1 AT2G23740 37.838 185 109 6 518 700 1193 1373 1.40e-25 114
MS.gene052394.t1 AT2G23740 37.838 185 109 6 518 700 1200 1380 1.60e-25 113
MS.gene052394.t1 AT2G23740 37.838 185 109 6 518 700 1200 1380 1.60e-25 113
MS.gene052394.t1 AT2G23740 37.838 185 109 6 518 700 1200 1380 1.60e-25 113
MS.gene052394.t1 AT2G35160 27.476 313 158 10 388 697 543 789 1.15e-23 107
MS.gene052394.t1 AT2G35160 27.476 313 158 10 388 697 543 789 1.15e-23 107
MS.gene052394.t1 AT2G35160 27.476 313 158 10 388 697 543 789 1.15e-23 107
MS.gene052394.t1 AT2G35160 27.476 313 158 10 388 697 543 789 1.15e-23 107
MS.gene052394.t1 AT2G35160 27.476 313 158 10 388 697 507 753 1.29e-23 107
MS.gene052394.t1 AT1G17770 27.089 347 182 12 374 698 392 689 5.29e-23 104
MS.gene052394.t1 AT2G22740 26.205 332 170 12 388 698 509 786 3.03e-22 102
MS.gene052394.t1 AT2G22740 26.205 332 170 12 388 698 509 786 3.03e-22 102
MS.gene052394.t1 AT3G03750 34.225 187 104 7 520 697 169 345 4.79e-21 95.9
MS.gene052394.t1 AT5G13960 28.929 280 132 11 442 698 385 620 2.23e-20 96.3
MS.gene052394.t1 AT5G13960 28.929 280 132 11 442 698 251 486 6.15e-20 94.4
MS.gene052394.t1 AT2G23740 40.678 118 66 4 518 633 1200 1315 1.25e-18 91.7
MS.gene052394.t1 AT2G23740 40.678 118 66 4 518 633 1200 1315 1.25e-18 91.7
MS.gene052394.t1 AT2G24740 34.043 188 106 7 527 698 566 751 1.61e-17 87.4
MS.gene052394.t1 AT1G77300 31.188 202 104 9 504 698 990 1163 8.97e-15 79.0
MS.gene052394.t1 AT1G77300 31.188 202 104 9 504 698 990 1163 9.79e-15 79.0
MS.gene052394.t1 AT1G76710 25.311 241 135 9 462 697 24 224 3.55e-12 69.7
MS.gene052394.t1 AT1G76710 25.311 241 135 9 462 697 24 224 3.55e-12 69.7
MS.gene052394.t1 AT1G76710 25.311 241 135 9 462 697 24 224 4.43e-12 69.7
MS.gene052394.t1 AT1G76710 26.141 241 133 9 462 697 24 224 5.14e-12 69.3

Find 176 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTGCATCCAATAAAAT+TGG 0.191716 7.4:-12014584 None:intergenic
AATGGTGGTGGGAAGGAGTC+AGG 0.273158 7.4:+12013686 MS.gene052394:CDS
TCATTCTTCGTTGAAGAATC+TGG 0.289372 7.4:-12013149 None:intergenic
CCACTTTCAATTATTCTTCC+TGG 0.302409 7.4:+12012638 MS.gene052394:CDS
CTCCCTCTTAGAGGTTCTTC+AGG 0.302519 7.4:-12012458 None:intergenic
ATCTCGGAACACCAAGTTTC+GGG 0.305414 7.4:-12013885 None:intergenic
TTCTCCCTTTGTTAGGTCAT+TGG 0.308919 7.4:-12013795 None:intergenic
TGGAATAACTTGCAACTTGC+AGG 0.315365 7.4:+12014252 MS.gene052394:CDS
AAAGGCCTCACTCGCTCTTC+TGG 0.320726 7.4:-12012260 None:intergenic
ATAGATCTTCTCCCTCTTAG+AGG 0.322837 7.4:-12012467 None:intergenic
TCGGGTACTGTACCAGGTTC+TGG 0.322983 7.4:-12012371 None:intergenic
TCGCATACAAATGCACCTTT+TGG 0.332075 7.4:-12014482 None:intergenic
GAGGCTAGCTTGGCATTAAA+AGG 0.339041 7.4:-12013272 None:intergenic
ATGAATGATTTATCAGAAAA+TGG 0.339753 7.4:+12013668 MS.gene052394:CDS
CTCTTCAAGTGTCCTTTACA+TGG 0.346446 7.4:-12014160 None:intergenic
TAGCAGTCTGGAACTACTTT+CGG 0.348541 7.4:-12012390 None:intergenic
TGTTCTTGTGCAAATAAAAC+TGG 0.349678 7.4:+12013995 MS.gene052394:CDS
GAAGAATCTGGAACACTTGA+TGG 0.355050 7.4:-12013137 None:intergenic
TCATCAACAGGCTCATCCTT+GGG 0.358814 7.4:-12012596 None:intergenic
TGCTTATATGCGGCATCATA+TGG 0.364693 7.4:+12014641 MS.gene052394:CDS
TGGAGCATTCATTACATTGC+AGG 0.368904 7.4:-12013729 None:intergenic
TTTCGACGAAGATGATAATC+AGG 0.370945 7.4:+12011882 MS.gene052394:CDS
AAGTGGGCATTCTGTGCAAT+AGG 0.377130 7.4:-12014107 None:intergenic
GAAACTAGTACAGCATCATT+TGG 0.385206 7.4:-12013635 None:intergenic
CGGAACGCAGCTACAACTTT+GGG 0.385346 7.4:-12011733 None:intergenic
TAAATCATTCATTACATCCT+TGG 0.389569 7.4:-12013657 None:intergenic
ATCAGTCTGTGGAGCTGTTT+CGG 0.391115 7.4:+12016496 MS.gene052394:CDS
CGCAGCTACAACTTTGGGAT+TGG 0.391553 7.4:-12011728 None:intergenic
AAAGATTCTTCTGTTGCAAA+TGG 0.393792 7.4:+12013539 MS.gene052394:CDS
ATAGGAAGGGGAGGTGGATG+AGG 0.395095 7.4:+12012229 MS.gene052394:intron
ACGGAACGCAGCTACAACTT+TGG 0.397209 7.4:-12011734 None:intergenic
ATATGTCTCTATCTCGTATT+GGG 0.401728 7.4:+12013918 MS.gene052394:CDS
GTGGGGTCTTCGTACCTTAG+AGG 0.409194 7.4:+12014454 MS.gene052394:CDS
CATCTCGGAACACCAAGTTT+CGG 0.414194 7.4:-12013886 None:intergenic
TTGAAGAGGTTGAAATTAAG+AGG 0.415530 7.4:+12012281 MS.gene052394:CDS
ACTGTACCAGGTTCTGGTTT+CGG 0.417572 7.4:-12012365 None:intergenic
AAAAGGCACTTCTACATTTG+AGG 0.429762 7.4:-12013255 None:intergenic
TATTCAGAAGGCGCCCGTCT+TGG 0.431829 7.4:-12012304 None:intergenic
AATATGTCTCTATCTCGTAT+TGG 0.433955 7.4:+12013917 MS.gene052394:CDS
AGAGGTTCTTCAGGTGATGC+AGG 0.434234 7.4:-12012449 None:intergenic
CTACTTTCGGGTACTGTACC+AGG 0.435962 7.4:-12012377 None:intergenic
AGCAGTCTGGAACTACTTTC+GGG 0.436072 7.4:-12012389 None:intergenic
GATGGACCCTCAACTTCAAC+CGG 0.436131 7.4:-12016008 None:intergenic
TTATTGAAGAAGAGAATTAT+CGG 0.441808 7.4:+12011842 MS.gene052394:CDS
TTCATCAACAGGCTCATCCT+TGG 0.443753 7.4:-12012597 None:intergenic
TCATATTCCACTTCATCAAC+AGG 0.444462 7.4:-12012608 None:intergenic
GGAAGTTTATTAAAGAGTGC+TGG 0.444835 7.4:+12014182 MS.gene052394:CDS
TGCAAACTTGATTGAGATCC+CGG 0.450718 7.4:+12015989 MS.gene052394:CDS
TCAATTGTATGATGATGGTT+TGG 0.450870 7.4:-12013749 None:intergenic
TGCAGTCGCGTTTAGAGAAC+CGG 0.451236 7.4:+12012508 MS.gene052394:CDS
CCACTACATACCCCGAAACT+TGG 0.462264 7.4:+12013874 MS.gene052394:CDS
ATTCTGCATCCAATAAAATT+GGG 0.465274 7.4:-12014583 None:intergenic
GGTATGTAGTGGAACGGAGG+TGG 0.467193 7.4:-12013863 None:intergenic
GCAGCTACAACTTTGGGATT+GGG 0.472622 7.4:-12011727 None:intergenic
CGTAGACGATGAGGCTAGCT+TGG 0.472838 7.4:-12013282 None:intergenic
GTGGGAAACATTGTGGCAAT+CGG 0.474223 7.4:+12014218 MS.gene052394:CDS
GTCAACAACGGCATTTCCAT+TGG 0.474546 7.4:-12012414 None:intergenic
AACTTCAAACGGAAAAGGGT+GGG 0.474771 7.4:+12014436 MS.gene052394:CDS
CAAGCTAGCCTCATCGTCTA+CGG 0.483428 7.4:+12013283 MS.gene052394:CDS
TATCATCAATTGTATGATGA+TGG 0.484509 7.4:-12013754 None:intergenic
CTTAATTTCAACCTCTTCAA+AGG 0.485472 7.4:-12012278 None:intergenic
AGATTGTTGTTCTACCTGTA+TGG 0.486001 7.4:+12013946 MS.gene052394:CDS
TGTCAAGTCTTCTTCTGCCT+CGG 0.486075 7.4:+12013571 MS.gene052394:CDS
ATGGTGGTGGGAAGGAGTCA+GGG 0.489169 7.4:+12013687 MS.gene052394:CDS
TACAGAAACGAAAATGTTGA+AGG 0.496217 7.4:+12013215 MS.gene052394:CDS
CATTTAACAGGCGTTGAAGC+CGG 0.500971 7.4:+12011987 MS.gene052394:intron
ATTGGATGCAGAATGGGACT+CGG 0.501646 7.4:+12014592 MS.gene052394:CDS
TGCTGGAGCAAATGTGGTTG+TGG 0.502795 7.4:+12014199 MS.gene052394:CDS
ATCAGAAAATGGTGGTGGGA+AGG 0.507399 7.4:+12013679 MS.gene052394:CDS
ACTTCAAACGGAAAAGGGTG+GGG 0.508982 7.4:+12014437 MS.gene052394:CDS
CTGCTAGGTTTATTAATCAC+AGG 0.510781 7.4:+12014669 MS.gene052394:CDS
TGAGATCCCGGTTGAAGTTG+AGG 0.511676 7.4:+12016001 MS.gene052394:CDS
ACAGGCGTTGAAGCCGGAGC+AGG 0.511814 7.4:+12011993 MS.gene052394:intron
ATTTCCATTGGATAGCAGTC+TGG 0.512156 7.4:-12012402 None:intergenic
GATTTATCAGAAAATGGTGG+TGG 0.512406 7.4:+12013674 MS.gene052394:CDS
TCAAAAGAATCCGAGGCAAA+TGG 0.512477 7.4:+12013494 MS.gene052394:CDS
TTAAGCAGTTTCTTCAACAC+AGG 0.513595 7.4:-12011796 None:intergenic
TTTGACAACAGAGAGGCTCC+TGG 0.514647 7.4:-12012539 None:intergenic
AGAGAACCGGCTGTTGAACC+AGG 0.516917 7.4:+12012521 MS.gene052394:CDS
CAGCACAGGAAGAGTTGACC+TGG 0.518514 7.4:+12016190 MS.gene052394:CDS
TGAAATTAAGAGGCCAAGAC+GGG 0.518857 7.4:+12012291 MS.gene052394:CDS
TATTGAAGAAGAGAATTATC+GGG 0.522128 7.4:+12011843 MS.gene052394:CDS
AGCCTCATCGTCTACGGGAG+AGG 0.522947 7.4:+12013289 MS.gene052394:CDS
GAGGCTCCTGGTTCAACAGC+CGG 0.523530 7.4:-12012527 None:intergenic
ATGGGACTCGGGAGTTGTAA+AGG 0.526930 7.4:+12014604 MS.gene052394:CDS
CACTGCACAAGGTGTACTAA+AGG 0.528767 7.4:+12014033 MS.gene052394:CDS
ATCATACAATTGATGATACA+AGG 0.530123 7.4:+12013759 MS.gene052394:CDS
AAGCTAGCCTCATCGTCTAC+GGG 0.530312 7.4:+12013284 MS.gene052394:CDS
ACAGCATCATTTGGACCACT+TGG 0.530441 7.4:-12013626 None:intergenic
CCAGGAAGAATAATTGAAAG+TGG 0.531870 7.4:-12012638 None:intergenic
TACCAAGGCACGACATTGCA+CGG 0.532328 7.4:-12011753 None:intergenic
GAGATCCCGGTTGAAGTTGA+GGG 0.535502 7.4:+12016002 MS.gene052394:CDS
GCATTTGTATGCGAGTTTGT+TGG 0.535737 7.4:+12014491 MS.gene052394:CDS
TCACCTGAAGAACCTCTAAG+AGG 0.535998 7.4:+12012455 MS.gene052394:CDS
CTTGAAATATCAAAGAATGA+TGG 0.536228 7.4:+12014127 MS.gene052394:CDS
TCATTCTTTGATATTTCAAG+TGG 0.536998 7.4:-12014124 None:intergenic
TGGAAATGCCGTTGTTGACA+AGG 0.537284 7.4:+12012418 MS.gene052394:CDS
ACCTTAGAGGATCTTCCAAA+AGG 0.538142 7.4:+12014467 MS.gene052394:CDS
TTCCGTGCAATGTCGTGCCT+TGG 0.538210 7.4:+12011751 MS.gene052394:CDS
CATCAACAGGCTCATCCTTG+GGG 0.539530 7.4:-12012595 None:intergenic
AAACATATAGGAAGGGGAGG+TGG 0.546203 7.4:+12012223 MS.gene052394:intron
TAAGACACAATTGCCCATAC+AGG 0.549177 7.4:-12013960 None:intergenic
GGTTCTCTAAACGCGACTGC+AGG 0.550580 7.4:-12012506 None:intergenic
AGCGAGTGAGGCCTTTGAAG+AGG 0.550939 7.4:+12012267 MS.gene052394:CDS
GTTGTTGCCATCTTGCTCTC+CGG 0.550961 7.4:-12013177 None:intergenic
TGATGCTGTACTAGTTTCCA+AGG 0.551345 7.4:+12013640 MS.gene052394:CDS
GGCACTTCTACATTTGAGGA+AGG 0.554254 7.4:-12013251 None:intergenic
TGTACTAAAGGAAGAGTTCG+TGG 0.555497 7.4:+12014045 MS.gene052394:CDS
CTCGTCCAGAAGAGCGAGTG+AGG 0.555750 7.4:+12012255 MS.gene052394:CDS
ACATGATAATAGTGATGAGA+TGG 0.557142 7.4:-12016026 None:intergenic
CTTCTTTCCCTTGTCAACAA+CGG 0.558518 7.4:-12012426 None:intergenic
TTGAAATTAAGAGGCCAAGA+CGG 0.558896 7.4:+12012290 MS.gene052394:CDS
TAGTACACCTTGTGCAGTGT+AGG 0.562647 7.4:-12014029 None:intergenic
CATCATATGGAAATGCTGCT+AGG 0.565185 7.4:+12014654 MS.gene052394:CDS
GATTGTTGTTCTACCTGTAT+GGG 0.567191 7.4:+12013947 MS.gene052394:CDS
AATGCGGCAGTAAATTCTGC+AGG 0.567559 7.4:+12016523 MS.gene052394:CDS
TTCAAACATATAGGAAGGGG+AGG 0.567942 7.4:+12012220 MS.gene052394:intron
GCAAATGGCTCACTAATTGA+CGG 0.570194 7.4:+12013509 MS.gene052394:CDS
CCGTTGAAGAGTTGCATGAG+AGG 0.572231 7.4:+12014525 MS.gene052394:CDS
CCTCTCATGCAACTCTTCAA+CGG 0.572497 7.4:-12014525 None:intergenic
CCAAGTTTCGGGGTATGTAG+TGG 0.575383 7.4:-12013874 None:intergenic
TAACTTCAAACGGAAAAGGG+TGG 0.576424 7.4:+12014435 MS.gene052394:CDS
GCTGGAGCAAATGTGGTTGT+GGG 0.576532 7.4:+12014200 MS.gene052394:CDS
AATTAGTGAGCCATTTGCCT+CGG 0.579283 7.4:-12013504 None:intergenic
AGTTCCAGACTGCTATCCAA+TGG 0.584444 7.4:+12012398 MS.gene052394:CDS
GCTACCAATGACCTAACAAA+GGG 0.586822 7.4:+12013791 MS.gene052394:CDS
GGTTGTTTAGAACCATGTAA+AGG 0.588108 7.4:+12014148 MS.gene052394:CDS
TTGAGCCACCGCTATTCAGA+AGG 0.590615 7.4:-12012316 None:intergenic
TTGGATGCAGAATGGGACTC+GGG 0.591262 7.4:+12014593 MS.gene052394:CDS
CCGCATATAAGCAAAGAGCT+TGG 0.591694 7.4:-12014631 None:intergenic
GGATGAGCCTGTTGATGAAG+TGG 0.592139 7.4:+12012601 MS.gene052394:CDS
TGGTGGTGGGAAGGAGTCAG+GGG 0.592292 7.4:+12013688 MS.gene052394:CDS
GTTTCTTCACACTGCCCAAG+TGG 0.593879 7.4:+12013611 MS.gene052394:CDS
CAGCATCATTTGGACCACTT+GGG 0.595553 7.4:-12013625 None:intergenic
GTATGTAGTGGAACGGAGGT+GGG 0.595993 7.4:-12013862 None:intergenic
GGGCGCCTTCTGAATAGCGG+TGG 0.597665 7.4:+12012311 MS.gene052394:CDS
AATGTCGTGCCTTGGTATTG+AGG 0.598959 7.4:+12011759 MS.gene052394:CDS
CCAAGCTCTTTGCTTATATG+CGG 0.599852 7.4:+12014631 MS.gene052394:CDS
ATTTATCAGAAAATGGTGGT+GGG 0.604456 7.4:+12013675 MS.gene052394:CDS
GTAAAGATAACGCCAACAGT+TGG 0.607022 7.4:+12013467 MS.gene052394:CDS
TCAACGAAGAATGATACAGC+CGG 0.609769 7.4:+12013158 MS.gene052394:CDS
GATACAGCCGGAGAGCAAGA+TGG 0.613302 7.4:+12013170 MS.gene052394:CDS
CAGGAAGAATAATTGAAAGT+GGG 0.614074 7.4:-12012637 None:intergenic
CACCTGAAGAACCTCTAAGA+GGG 0.617054 7.4:+12012456 MS.gene052394:CDS
GAGAGCTTGAGGTGCGACCG+AGG 0.619496 7.4:-12013588 None:intergenic
GGAAATGCCGTTGTTGACAA+GGG 0.619844 7.4:+12012419 MS.gene052394:CDS
TTGTGCAAATAAAACTGGAG+GGG 0.619905 7.4:+12014000 MS.gene052394:CDS
GTGATAAAAGGGTAAGCATG+AGG 0.620989 7.4:-12012572 None:intergenic
CTTGTGCAAATAAAACTGGA+GGG 0.623879 7.4:+12013999 MS.gene052394:CDS
CATTCTTTGATATTTCAAGT+GGG 0.624513 7.4:-12014123 None:intergenic
ACATATTAACATATGCATCT+CGG 0.625013 7.4:-12013901 None:intergenic
CATGTAAAGGACACTTGAAG+AGG 0.627286 7.4:+12014161 MS.gene052394:CDS
AAAACACCGAAACCAGAACC+TGG 0.629811 7.4:+12012359 MS.gene052394:CDS
CGGGGTATGTAGTGGAACGG+AGG 0.630898 7.4:-12013866 None:intergenic
ATCAACAGGCTCATCCTTGG+GGG 0.632661 7.4:-12012594 None:intergenic
GACGGGCGCCTTCTGAATAG+CGG 0.633851 7.4:+12012308 MS.gene052394:CDS
TGGCCTTTCAAAAGAATCCG+AGG 0.635568 7.4:+12013487 MS.gene052394:CDS
TGTGAAGAAACGAGAGCTTG+AGG 0.636405 7.4:-12013599 None:intergenic
TCTTGTGCAAATAAAACTGG+AGG 0.636661 7.4:+12013998 MS.gene052394:CDS
TCATACAATTGATGATACAA+GGG 0.638178 7.4:+12013760 MS.gene052394:CDS
CTTTGTGTTCCTCAATACCA+AGG 0.638764 7.4:-12011768 None:intergenic
TTTCGGGGTATGTAGTGGAA+CGG 0.641425 7.4:-12013869 None:intergenic
TGCTACCAATGACCTAACAA+AGG 0.641969 7.4:+12013790 MS.gene052394:CDS
AAAGAGTGCTGGAGCAAATG+TGG 0.647429 7.4:+12014193 MS.gene052394:CDS
AGTTGCAAGTTATTCCACGT+TGG 0.647632 7.4:-12014246 None:intergenic
TACCTCTCCCGTAGACGATG+AGG 0.655521 7.4:-12013291 None:intergenic
GAGCTGTTTCGGTGCAAATG+CGG 0.659533 7.4:+12016507 MS.gene052394:CDS
TGTGGTTGTGGGAAACATTG+TGG 0.665887 7.4:+12014211 MS.gene052394:CDS
TGATGACGATGATCAGTCTG+TGG 0.667712 7.4:+12016485 MS.gene052394:CDS
AATGATTTATCAGAAAATGG+TGG 0.678300 7.4:+12013671 MS.gene052394:CDS
TCTCGGAACACCAAGTTTCG+GGG 0.678594 7.4:-12013884 None:intergenic
GGCAATCGGATTGTCCAACG+TGG 0.681486 7.4:+12014232 MS.gene052394:CDS
AGCACAGGAAGAGTTGACCT+GGG 0.686803 7.4:+12016191 MS.gene052394:CDS
ATGGACCCTCAACTTCAACC+GGG 0.708842 7.4:-12016007 None:intergenic
AATGGCTCACTAATTGACGG+AGG 0.719021 7.4:+12013512 MS.gene052394:CDS
GCAAGATGGCAACAACACTG+TGG 0.769030 7.4:+12013184 MS.gene052394:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATATGAAGCATAATT+AGG + chr7.4:12015753-12015772 MS.gene052394:intron 15.0%
!! CAATATACAATACTTATTAT+TGG - chr7.4:12012761-12012780 None:intergenic 15.0%
!! TAAAATATGAAGCATAATTA+GGG + chr7.4:12015754-12015773 MS.gene052394:intron 15.0%
!! TAAATTGTATGATAAAAACT+GGG + chr7.4:12011816-12011835 MS.gene052394:CDS 15.0%
!! TTAAATTGTATGATAAAAAC+TGG + chr7.4:12011815-12011834 MS.gene052394:CDS 15.0%
!!! AATAATTTATTTTGAGAAAG+TGG + chr7.4:12015514-12015533 MS.gene052394:intron 15.0%
!!! TGGTTTTTAATTTTTGAATA+AGG + chr7.4:12015647-12015666 MS.gene052394:intron 15.0%
!!! TTGAGTTGAAATTAATTATA+AGG - chr7.4:12014907-12014926 None:intergenic 15.0%
!!! TTGATATAAAGCTTTTTATT+TGG + chr7.4:12016263-12016282 MS.gene052394:intron 15.0%
!!! TTTTTTGAAAAGTAATTACT+TGG + chr7.4:12014734-12014753 MS.gene052394:intron 15.0%
!! AAAGATGTCTAAATATGTTA+AGG - chr7.4:12014383-12014402 None:intergenic 20.0%
!! AAGAAAAAGTGAAAATTTCA+TGG + chr7.4:12013816-12013835 MS.gene052394:CDS 20.0%
!! AAGATGTCTAAATATGTTAA+GGG - chr7.4:12014382-12014401 None:intergenic 20.0%
!! AGAAAAAGTGAAAATTTCAT+GGG + chr7.4:12013817-12013836 MS.gene052394:CDS 20.0%
!! ATGAATGATTTATCAGAAAA+TGG + chr7.4:12013668-12013687 MS.gene052394:CDS 20.0%
!! CTATGAAAACAATTAGAAAT+TGG - chr7.4:12015343-12015362 None:intergenic 20.0%
!! TGTAAAGATTTGAATACTTT+GGG + chr7.4:12014994-12015013 MS.gene052394:intron 20.0%
!! TTATTGAAGAAGAGAATTAT+CGG + chr7.4:12011842-12011861 MS.gene052394:CDS 20.0%
!! TTGTAAAGATTTGAATACTT+TGG + chr7.4:12014993-12015012 MS.gene052394:intron 20.0%
!!! ACTGTTTTATATCATTTAAC+AGG + chr7.4:12011975-12011994 MS.gene052394:intron 20.0%
!!! CTTATAACTAAATTTTTCCA+CGG + chr7.4:12015173-12015192 MS.gene052394:intron 20.0%
!!! TAATAAGTATTGTATATTGC+TGG + chr7.4:12012762-12012781 MS.gene052394:intron 20.0%
!!! TAATTTTTGAATAAGGCTTT+TGG + chr7.4:12015654-12015673 MS.gene052394:intron 20.0%
!!! TATATCAAAATTATTTTCCC+TGG - chr7.4:12015458-12015477 None:intergenic 20.0%
!!! TATGCTTCATATTTTATGTT+AGG - chr7.4:12015750-12015769 None:intergenic 20.0%
! AAAGTGGTTCAGTTTAATAA+TGG + chr7.4:12015779-12015798 MS.gene052394:intron 25.0%
! AACTTGAAATATCCCAAAAA+TGG + chr7.4:12014548-12014567 MS.gene052394:CDS 25.0%
! AATGATTTATCAGAAAATGG+TGG + chr7.4:12013671-12013690 MS.gene052394:CDS 25.0%
! ACATATTAACATATGCATCT+CGG - chr7.4:12013904-12013923 None:intergenic 25.0%
! ACATTATATAATTCTCCATC+CGG - chr7.4:12012138-12012157 None:intergenic 25.0%
! ACTTGAAATATCCCAAAAAT+GGG + chr7.4:12014549-12014568 MS.gene052394:CDS 25.0%
! ATGTGTAGAAGAAAGATAAA+TGG - chr7.4:12013037-12013056 None:intergenic 25.0%
! ATTCTGCATCCAATAAAATT+GGG - chr7.4:12014586-12014605 None:intergenic 25.0%
! CTTGAAATATCAAAGAATGA+TGG + chr7.4:12014127-12014146 MS.gene052394:CDS 25.0%
! CTTTGTTACTGTTAATTCTA+TGG + chr7.4:12012175-12012194 MS.gene052394:intron 25.0%
! TAAATCATTCATTACATCCT+TGG - chr7.4:12013660-12013679 None:intergenic 25.0%
! TATCATCAATTGTATGATGA+TGG - chr7.4:12013757-12013776 None:intergenic 25.0%
! TATTGAAGAAGAGAATTATC+GGG + chr7.4:12011843-12011862 MS.gene052394:CDS 25.0%
! TCATTCTTTGATATTTCAAG+TGG - chr7.4:12014127-12014146 None:intergenic 25.0%
! TCATTTCTATGGTATGTATT+GGG + chr7.4:12015219-12015238 MS.gene052394:intron 25.0%
! TGATTTGAATAATACTTTGC+AGG + chr7.4:12013436-12013455 MS.gene052394:intron 25.0%
! TTACTGTTTACTGTATTTCT+GGG + chr7.4:12015880-12015899 MS.gene052394:intron 25.0%
! TTGAAAAATGCCATATACAA+TGG + chr7.4:12016301-12016320 MS.gene052394:intron 25.0%
! TTTACTGTTTACTGTATTTC+TGG + chr7.4:12015879-12015898 MS.gene052394:intron 25.0%
! TTTGTGTAATTCACTTTCTT+TGG + chr7.4:12016378-12016397 MS.gene052394:intron 25.0%
!! AAGGAAAAAACTTCTTTTGA+AGG - chr7.4:12012680-12012699 None:intergenic 25.0%
!! AATTTTATTGGATGCAGAAT+GGG + chr7.4:12014586-12014605 MS.gene052394:CDS 25.0%
!! ACATTTTGTCTTCTTACATT+AGG - chr7.4:12015378-12015397 None:intergenic 25.0%
!! ATCATACAATTGATGATACA+AGG + chr7.4:12013759-12013778 MS.gene052394:CDS 25.0%
!! CATTCTTTGATATTTCAAGT+GGG - chr7.4:12014126-12014145 None:intergenic 25.0%
!! TCATACAATTGATGATACAA+GGG + chr7.4:12013760-12013779 MS.gene052394:CDS 25.0%
!!! AAAGCTTTTTATTTGGTACT+TGG + chr7.4:12016270-12016289 MS.gene052394:intron 25.0%
!!! AAGAAGTTTTTTCCTTTTCA+CGG + chr7.4:12012684-12012703 MS.gene052394:intron 25.0%
!!! AGTTTAATAATGGACAGATT+GGG + chr7.4:12015789-12015808 MS.gene052394:intron 25.0%
!!! ATTTGGTTCTGTAATATGTT+TGG + chr7.4:12016221-12016240 MS.gene052394:intron 25.0%
!!! ATTTTTTGCCCTTTAAATTC+CGG + chr7.4:12012837-12012856 MS.gene052394:intron 25.0%
!!! GTTTTTCAAACATATAGGAA+GGG + chr7.4:12012216-12012235 MS.gene052394:intron 25.0%
!!! TATATTGCTGGTTCAAATTT+TGG + chr7.4:12012774-12012793 MS.gene052394:intron 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG + chr7.4:12012116-12012135 MS.gene052394:intron 25.0%
!!! TTAGGGTTTTTCAAACATAT+AGG + chr7.4:12012211-12012230 MS.gene052394:intron 25.0%
!!! TTTTAACTTCAAACGGAAAA+GGG + chr7.4:12014432-12014451 MS.gene052394:CDS 25.0%
!!! TTTTTAACTTCAAACGGAAA+AGG + chr7.4:12014431-12014450 MS.gene052394:CDS 25.0%
!!! TTTTTCAAACATATAGGAAG+GGG + chr7.4:12012217-12012236 MS.gene052394:intron 25.0%
AAAGATTCTTCTGTTGCAAA+TGG + chr7.4:12013539-12013558 MS.gene052394:CDS 30.0%
AAGAAAGATAAATGGCACAA+AGG - chr7.4:12013029-12013048 None:intergenic 30.0%
AATATGTCTCTATCTCGTAT+TGG + chr7.4:12013917-12013936 MS.gene052394:CDS 30.0%
ACATGATAATAGTGATGAGA+TGG - chr7.4:12016029-12016048 None:intergenic 30.0%
ACTATTATCATGTGAGAAGT+TGG + chr7.4:12016036-12016055 MS.gene052394:intron 30.0%
ATATGTCTCTATCTCGTATT+GGG + chr7.4:12013918-12013937 MS.gene052394:CDS 30.0%
ATCAAATGCCGGAATTTAAA+GGG - chr7.4:12012848-12012867 None:intergenic 30.0%
ATGTAAGAAGACAAAATGTC+AGG + chr7.4:12015379-12015398 MS.gene052394:intron 30.0%
ATTGCATATAACATAAGCCA+AGG - chr7.4:12012890-12012909 None:intergenic 30.0%
ATTTATCAGAAAATGGTGGT+GGG + chr7.4:12013675-12013694 MS.gene052394:CDS 30.0%
CACAATAAAAAGACCATTTC+TGG - chr7.4:12012987-12013006 None:intergenic 30.0%
CAGGAAGAATAATTGAAAGT+GGG - chr7.4:12012640-12012659 None:intergenic 30.0%
CATTCTGCATCCAATAAAAT+TGG - chr7.4:12014587-12014606 None:intergenic 30.0%
CTAATGTATGATGTATAGAC+CGG - chr7.4:12012069-12012088 None:intergenic 30.0%
CTTAATTTCAACCTCTTCAA+AGG - chr7.4:12012281-12012300 None:intergenic 30.0%
GTCATTTCTATGGTATGTAT+TGG + chr7.4:12015218-12015237 MS.gene052394:intron 30.0%
TAAAGGGCAAAAAATCAATC+AGG - chr7.4:12012832-12012851 None:intergenic 30.0%
TACAGAAACGAAAATGTTGA+AGG + chr7.4:12013215-12013234 MS.gene052394:CDS 30.0%
TATAATTACCTTTGTTGCGT+AGG + chr7.4:12016086-12016105 MS.gene052394:intron 30.0%
TATTGTCAATAGCATGCAAA+TGG - chr7.4:12015852-12015871 None:intergenic 30.0%
TCAACAAGACTAAATTGCTA+AGG - chr7.4:12014797-12014816 None:intergenic 30.0%
TGTTCTTGTGCAAATAAAAC+TGG + chr7.4:12013995-12014014 MS.gene052394:CDS 30.0%
TTCTTCTACACATTCTATTG+CGG + chr7.4:12013044-12013063 MS.gene052394:intron 30.0%
TTGAAGAGGTTGAAATTAAG+AGG + chr7.4:12012281-12012300 MS.gene052394:CDS 30.0%
TTTGGATTGTTTACATATGC+AGG + chr7.4:12016396-12016415 MS.gene052394:intron 30.0%
! ACATACGTTCCCAATTTTAT+TGG + chr7.4:12014574-12014593 MS.gene052394:CDS 30.0%
! ATTACATTGCAGGAATTTTG+AGG - chr7.4:12013722-12013741 None:intergenic 30.0%
! CAATTTTATTGGATGCAGAA+TGG + chr7.4:12014585-12014604 MS.gene052394:CDS 30.0%
! TCAACATTTTCGTTTCTGTA+TGG - chr7.4:12013215-12013234 None:intergenic 30.0%
!! AACATTGCAGTTTTTAGACT+TGG - chr7.4:12013380-12013399 None:intergenic 30.0%
!! AACGTATGTTTCCCATTTTT+GGG - chr7.4:12014563-12014582 None:intergenic 30.0%
!! ATAAGGTTGATGAACTAAAC+CGG - chr7.4:12014890-12014909 None:intergenic 30.0%
!! ATAGTGTTTTTGCAGGATTA+TGG + chr7.4:12016453-12016472 MS.gene052394:intron 30.0%
!! ATGTTAGGTACTTTTTGTCT+GGG - chr7.4:12015735-12015754 None:intergenic 30.0%
!! CAGTTTAATAATGGACAGAT+TGG + chr7.4:12015788-12015807 MS.gene052394:intron 30.0%
!! GGTTTTTCAAACATATAGGA+AGG + chr7.4:12012215-12012234 MS.gene052394:intron 30.0%
!! TATGTTAGGTACTTTTTGTC+TGG - chr7.4:12015736-12015755 None:intergenic 30.0%
!! TCAATTGTATGATGATGGTT+TGG - chr7.4:12013752-12013771 None:intergenic 30.0%
!! TGTTTAAGTTGAATCGTTTC+TGG - chr7.4:12015405-12015424 None:intergenic 30.0%
!!! AGTTTGATATTTTGACATGG+TGG - chr7.4:12014938-12014957 None:intergenic 30.0%
!!! CAGGTGTTTTTAACTTCAAA+CGG + chr7.4:12014425-12014444 MS.gene052394:intron 30.0%
!!! CTCAGTTTGATATTTTGACA+TGG - chr7.4:12014941-12014960 None:intergenic 30.0%
!!! GTTTTATTTGCACAAGAACA+TGG - chr7.4:12013995-12014014 None:intergenic 30.0%
AAACGCTAAAAACCGTGAAA+AGG - chr7.4:12012699-12012718 None:intergenic 35.0%
AACACTCTTGGAATTTGGTT+TGG - chr7.4:12015700-12015719 None:intergenic 35.0%
AAGCATAATTAGGGTGAAAG+TGG + chr7.4:12015763-12015782 MS.gene052394:intron 35.0%
ACATACCATAGAAATGACAG+AGG - chr7.4:12015216-12015235 None:intergenic 35.0%
AGCCAACTAACCATTGTATA+TGG - chr7.4:12016314-12016333 None:intergenic 35.0%
AGCCTGAAACTGATAAAATC+TGG + chr7.4:12015575-12015594 MS.gene052394:intron 35.0%
ATCTAAACATCTGCCATAAC+GGG - chr7.4:12015970-12015989 None:intergenic 35.0%
ATGGAATCGGTAAGTATACT+CGG + chr7.4:12015603-12015622 MS.gene052394:intron 35.0%
CAGTTAGCAAGGTTTCTAAA+GGG - chr7.4:12016116-12016135 None:intergenic 35.0%
CATCAAATGCCGGAATTTAA+AGG - chr7.4:12012849-12012868 None:intergenic 35.0%
CATCTAAACATCTGCCATAA+CGG - chr7.4:12015971-12015990 None:intergenic 35.0%
CCACTTTCAATTATTCTTCC+TGG + chr7.4:12012638-12012657 MS.gene052394:CDS 35.0%
CCAGGAAGAATAATTGAAAG+TGG - chr7.4:12012641-12012660 None:intergenic 35.0%
CCTGAAACTGATAAAATCTG+GGG + chr7.4:12015577-12015596 MS.gene052394:intron 35.0%
CTGCTAGGTTTATTAATCAC+AGG + chr7.4:12014669-12014688 MS.gene052394:CDS 35.0%
CTGTCTTAAAAAGAGCTTTC+TGG - chr7.4:12012946-12012965 None:intergenic 35.0%
CTTAAACAAGCTGTGTGATA+AGG + chr7.4:12015417-12015436 MS.gene052394:intron 35.0%
CTTGTGCAAATAAAACTGGA+GGG + chr7.4:12013999-12014018 MS.gene052394:CDS 35.0%
CTTTAAATTCCGGCATTTGA+TGG + chr7.4:12012847-12012866 MS.gene052394:intron 35.0%
GAAACTAGTACAGCATCATT+TGG - chr7.4:12013638-12013657 None:intergenic 35.0%
GAAGTAGTACAATATGCAAG+TGG - chr7.4:12012916-12012935 None:intergenic 35.0%
GATTTATCAGAAAATGGTGG+TGG + chr7.4:12013674-12013693 MS.gene052394:CDS 35.0%
GCAGGAGTAGATTATGAATA+AGG + chr7.4:12015307-12015326 MS.gene052394:intron 35.0%
GCATTCACATGTTATGTATC+TGG + chr7.4:12011936-12011955 MS.gene052394:intron 35.0%
GCCTGAAACTGATAAAATCT+GGG + chr7.4:12015576-12015595 MS.gene052394:intron 35.0%
TATTCATAATCTACTCCTGC+CGG - chr7.4:12015307-12015326 None:intergenic 35.0%
TCAGTAATTCTATCCCGTTA+TGG + chr7.4:12015954-12015973 MS.gene052394:intron 35.0%
TCAGTTAGCAAGGTTTCTAA+AGG - chr7.4:12016117-12016136 None:intergenic 35.0%
TCATATTCCACTTCATCAAC+AGG - chr7.4:12012611-12012630 None:intergenic 35.0%
TCATTCTTCGTTGAAGAATC+TGG - chr7.4:12013152-12013171 None:intergenic 35.0%
TCTTGTGCAAATAAAACTGG+AGG + chr7.4:12013998-12014017 MS.gene052394:CDS 35.0%
TGACCAGGCAAAAAAATATC+CGG - chr7.4:12013353-12013372 None:intergenic 35.0%
TGCCATATACAATGGTTAGT+TGG + chr7.4:12016309-12016328 MS.gene052394:intron 35.0%
TTAAGCAGTTTCTTCAACAC+AGG - chr7.4:12011799-12011818 None:intergenic 35.0%
TTATGATTTAAGTGTCTGCC+TGG - chr7.4:12015909-12015928 None:intergenic 35.0%
TTCAAAGACATCAGTTAGCA+AGG - chr7.4:12016127-12016146 None:intergenic 35.0%
TTGAAATTAAGAGGCCAAGA+CGG + chr7.4:12012290-12012309 MS.gene052394:CDS 35.0%
TTGTGCAAATAAAACTGGAG+GGG + chr7.4:12014000-12014019 MS.gene052394:CDS 35.0%
TTGTTAATTGTTACTCCCTC+CGG + chr7.4:12012047-12012066 MS.gene052394:intron 35.0%
TTTCGACGAAGATGATAATC+AGG + chr7.4:12011882-12011901 MS.gene052394:CDS 35.0%
TTTCGATGTTGATGTCATTG+AGG + chr7.4:12014319-12014338 MS.gene052394:intron 35.0%
! AGATTGTTGTTCTACCTGTA+TGG + chr7.4:12013946-12013965 MS.gene052394:CDS 35.0%
! AGGAATGATTTTGTGGATCA+CGG - chr7.4:12014090-12014109 None:intergenic 35.0%
! CTTTTTCTTCTCCCTTTGTT+AGG - chr7.4:12013805-12013824 None:intergenic 35.0%
! GAACGTATGTTTCCCATTTT+TGG - chr7.4:12014564-12014583 None:intergenic 35.0%
! GATTGTTGTTCTACCTGTAT+GGG + chr7.4:12013947-12013966 MS.gene052394:CDS 35.0%
! GATTTTTCTGGATGTGAAGA+AGG - chr7.4:12016169-12016188 None:intergenic 35.0%
! GGAAGTTTATTAAAGAGTGC+TGG + chr7.4:12014182-12014201 MS.gene052394:CDS 35.0%
! GGTTGTTTAGAACCATGTAA+AGG + chr7.4:12014148-12014167 MS.gene052394:CDS 35.0%
! GTGCAATAGGAATGATTTTG+TGG - chr7.4:12014097-12014116 None:intergenic 35.0%
! GTTTTCTGTTACACCAGAAA+TGG + chr7.4:12012971-12012990 MS.gene052394:intron 35.0%
! TTCTTATATTTGAGACCGGA+TGG + chr7.4:12012120-12012139 MS.gene052394:intron 35.0%
!! AAAAGGCACTTCTACATTTG+AGG - chr7.4:12013258-12013277 None:intergenic 35.0%
!! ACACTTGATGGTTCTTTTGA+AGG - chr7.4:12013128-12013147 None:intergenic 35.0%
!! TAAGGTTGATGAACTAAACC+GGG - chr7.4:12014889-12014908 None:intergenic 35.0%
!! TATGTGCATAGTGTTTTTGC+AGG + chr7.4:12016446-12016465 MS.gene052394:intron 35.0%
!! TTGTTTTTCTTTTCCTGCTC+CGG - chr7.4:12012009-12012028 None:intergenic 35.0%
!!! CTTTGCTTGTTTTGACATAC+CGG + chr7.4:12015285-12015304 MS.gene052394:intron 35.0%
!!! TGGTTTTGTGTAGTTGAGTT+AGG + chr7.4:12015674-12015693 MS.gene052394:intron 35.0%
!!! TTTCGGTGTTTTCAATGCAA+AGG - chr7.4:12012351-12012370 None:intergenic 35.0%
!!! TTTGCTTTTTGACAACAGAG+AGG - chr7.4:12012549-12012568 None:intergenic 35.0%
!!! TTTTCACGGTTTTTAGCGTT+TGG + chr7.4:12012698-12012717 MS.gene052394:intron 35.0%
AAACAAGCTGTGTGATAAGG+AGG + chr7.4:12015420-12015439 MS.gene052394:intron 40.0%
AAATCTGGGGAACATGGAAT+CGG + chr7.4:12015590-12015609 MS.gene052394:intron 40.0%
AACAAGCTGTGTGATAAGGA+GGG + chr7.4:12015421-12015440 MS.gene052394:intron 40.0%
AACTTCAAACGGAAAAGGGT+GGG + chr7.4:12014436-12014455 MS.gene052394:CDS 40.0%
AATTAGTGAGCCATTTGCCT+CGG - chr7.4:12013507-12013526 None:intergenic 40.0%
ACATAAGCCAAGGAATCACA+TGG - chr7.4:12012880-12012899 None:intergenic 40.0%
ACCTTAGAGGATCTTCCAAA+AGG + chr7.4:12014467-12014486 MS.gene052394:CDS 40.0%
AGTTGCAAGTTATTCCACGT+TGG - chr7.4:12014249-12014268 None:intergenic 40.0%
ATAAGACGAGTTTCACTCCA+TGG - chr7.4:12015158-12015177 None:intergenic 40.0%
ATAGATCTTCTCCCTCTTAG+AGG - chr7.4:12012470-12012489 None:intergenic 40.0%
ATATATGTGTGTCTGCTTGG+TGG + chr7.4:12013403-12013422 MS.gene052394:intron 40.0%
ATGGCTGCTGAAATGTGTTA+GGG + chr7.4:12012194-12012213 MS.gene052394:intron 40.0%
ATGTATGATGTATAGACCGG+AGG - chr7.4:12012066-12012085 None:intergenic 40.0%
ATTTCCATTGGATAGCAGTC+TGG - chr7.4:12012405-12012424 None:intergenic 40.0%
CATCATATGGAAATGCTGCT+AGG + chr7.4:12014654-12014673 MS.gene052394:CDS 40.0%
CATGTAAAGGACACTTGAAG+AGG + chr7.4:12014161-12014180 MS.gene052394:CDS 40.0%
CCAAGCTCTTTGCTTATATG+CGG + chr7.4:12014631-12014650 MS.gene052394:CDS 40.0%
CTCTTCAAGTGTCCTTTACA+TGG - chr7.4:12014163-12014182 None:intergenic 40.0%
CTGATAAAATCTGGGGAACA+TGG + chr7.4:12015584-12015603 MS.gene052394:intron 40.0%
CTTCTTTCCCTTGTCAACAA+CGG - chr7.4:12012429-12012448 None:intergenic 40.0%
CTTTGTGTTCCTCAATACCA+AGG - chr7.4:12011771-12011790 None:intergenic 40.0%
GAGATATATGTGTGTCTGCT+TGG + chr7.4:12013400-12013419 MS.gene052394:intron 40.0%
GCAAATGGCTCACTAATTGA+CGG + chr7.4:12013509-12013528 MS.gene052394:CDS 40.0%
GCATTTGTATGCGAGTTTGT+TGG + chr7.4:12014491-12014510 MS.gene052394:CDS 40.0%
GCTACCAATGACCTAACAAA+GGG + chr7.4:12013791-12013810 MS.gene052394:CDS 40.0%
GGAGCAGGAAAAGAAAAACA+AGG + chr7.4:12012008-12012027 MS.gene052394:CDS 40.0%
GGCATAGTCAGTTAATTACC+AGG - chr7.4:12012659-12012678 None:intergenic 40.0%
GTAAAGATAACGCCAACAGT+TGG + chr7.4:12013467-12013486 MS.gene052394:CDS 40.0%
GTGATAAAAGGGTAAGCATG+AGG - chr7.4:12012575-12012594 None:intergenic 40.0%
GTTTCACTCCATGGTTGAAA+AGG - chr7.4:12015149-12015168 None:intergenic 40.0%
TAACTTCAAACGGAAAAGGG+TGG + chr7.4:12014435-12014454 MS.gene052394:CDS 40.0%
TAAGACACAATTGCCCATAC+AGG - chr7.4:12013963-12013982 None:intergenic 40.0%
TATGGCTGCTGAAATGTGTT+AGG + chr7.4:12012193-12012212 MS.gene052394:intron 40.0%
TCAAAAGAATCCGAGGCAAA+TGG + chr7.4:12013494-12013513 MS.gene052394:CDS 40.0%
TCAACGAAGAATGATACAGC+CGG + chr7.4:12013158-12013177 MS.gene052394:CDS 40.0%
TGAAATTAAGAGGCCAAGAC+GGG + chr7.4:12012291-12012310 MS.gene052394:CDS 40.0%
TGCAAACTTGATTGAGATCC+CGG + chr7.4:12015989-12016008 MS.gene052394:CDS 40.0%
TGCTACCAATGACCTAACAA+AGG + chr7.4:12013790-12013809 MS.gene052394:CDS 40.0%
TGCTTATATGCGGCATCATA+TGG + chr7.4:12014641-12014660 MS.gene052394:CDS 40.0%
TGGAATCGGTAAGTATACTC+GGG + chr7.4:12015604-12015623 MS.gene052394:intron 40.0%
TGGACAGATTGGGAAATTAG+TGG + chr7.4:12015799-12015818 MS.gene052394:intron 40.0%
TGTACTAAAGGAAGAGTTCG+TGG + chr7.4:12014045-12014064 MS.gene052394:CDS 40.0%
TGTATGATGTATAGACCGGA+GGG - chr7.4:12012065-12012084 None:intergenic 40.0%
TTCAAACATATAGGAAGGGG+AGG + chr7.4:12012220-12012239 MS.gene052394:intron 40.0%
TTCTCCCTTTGTTAGGTCAT+TGG - chr7.4:12013798-12013817 None:intergenic 40.0%
TTTAGACTTGGATCATGACC+AGG - chr7.4:12013368-12013387 None:intergenic 40.0%
! CCCCAGATTTTATCAGTTTC+AGG - chr7.4:12015580-12015599 None:intergenic 40.0%
! CTAATGATTACGTGCTACTC+AGG + chr7.4:12014406-12014425 MS.gene052394:intron 40.0%
! CTTGTCAACCTTTTCAACCA+TGG + chr7.4:12015138-12015157 MS.gene052394:intron 40.0%
! GAAGAATCTGGAACACTTGA+TGG - chr7.4:12013140-12013159 None:intergenic 40.0%
! GTGAACCTCTGTCATTTCTA+TGG + chr7.4:12015208-12015227 MS.gene052394:intron 40.0%
! TACAATGGTTAGTTGGCTCT+TGG + chr7.4:12016316-12016335 MS.gene052394:intron 40.0%
! TAGCAGTCTGGAACTACTTT+CGG - chr7.4:12012393-12012412 None:intergenic 40.0%
! TCGCATACAAATGCACCTTT+TGG - chr7.4:12014485-12014504 None:intergenic 40.0%
! TGATGCTGTACTAGTTTCCA+AGG + chr7.4:12013640-12013659 MS.gene052394:CDS 40.0%
! TGGAATAACTTGCAACTTGC+AGG + chr7.4:12014252-12014271 MS.gene052394:CDS 40.0%
! TGGAGCATTCATTACATTGC+AGG - chr7.4:12013732-12013751 None:intergenic 40.0%
! TTGCCTCGGATTCTTTTGAA+AGG - chr7.4:12013493-12013512 None:intergenic 40.0%
!! ACCTTTTGGAAGATCCTCTA+AGG - chr7.4:12014471-12014490 None:intergenic 40.0%
!! CTGTTTACTGTATTTCTGGG+TGG + chr7.4:12015883-12015902 MS.gene052394:intron 40.0%
!! TCTTTTGAAAGGCCAACTGT+TGG - chr7.4:12013482-12013501 None:intergenic 40.0%
!!! TTGCAGGAATTTTGAGGCAT+AGG - chr7.4:12013716-12013735 None:intergenic 40.0%
AAAACACCGAAACCAGAACC+TGG + chr7.4:12012359-12012378 MS.gene052394:CDS 45.0%
AAACATATAGGAAGGGGAGG+TGG + chr7.4:12012223-12012242 MS.gene052394:intron 45.0%
AAGCCAAGGAATCACATGGT+GGG - chr7.4:12012876-12012895 None:intergenic 45.0%
AAGCTGCACCTCAGTTCTTT+GGG + chr7.4:12013325-12013344 MS.gene052394:intron 45.0%
AAGTGGGCATTCTGTGCAAT+AGG - chr7.4:12014110-12014129 None:intergenic 45.0%
AATCGGTAAGTATACTCGGG+GGG + chr7.4:12015607-12015626 MS.gene052394:intron 45.0%
AATGCGGCAGTAAATTCTGC+AGG + chr7.4:12016523-12016542 MS.gene052394:CDS 45.0%
AATGGCTCACTAATTGACGG+AGG + chr7.4:12013512-12013531 MS.gene052394:CDS 45.0%
AATGTCGTGCCTTGGTATTG+AGG + chr7.4:12011759-12011778 MS.gene052394:CDS 45.0%
ACAGCATCATTTGGACCACT+TGG - chr7.4:12013629-12013648 None:intergenic 45.0%
ACTTCAAACGGAAAAGGGTG+GGG + chr7.4:12014437-12014456 MS.gene052394:CDS 45.0%
AGAACCAAATCGACATACCC+AGG - chr7.4:12016211-12016230 None:intergenic 45.0%
AGTTCCAGACTGCTATCCAA+TGG + chr7.4:12012398-12012417 MS.gene052394:CDS 45.0%
ATCAGTCTGTGGAGCTGTTT+CGG + chr7.4:12016496-12016515 MS.gene052394:CDS 45.0%
ATCCAGAAAAATCGCAGCAC+AGG + chr7.4:12016176-12016195 MS.gene052394:CDS 45.0%
ATCTCGGAACACCAAGTTTC+GGG - chr7.4:12013888-12013907 None:intergenic 45.0%
ATGTCATTGAGGCGACACTA+TGG + chr7.4:12014330-12014349 MS.gene052394:intron 45.0%
ATTGGATGCAGAATGGGACT+CGG + chr7.4:12014592-12014611 MS.gene052394:CDS 45.0%
CACTGCACAAGGTGTACTAA+AGG + chr7.4:12014033-12014052 MS.gene052394:CDS 45.0%
CAGCATCATTTGGACCACTT+GGG - chr7.4:12013628-12013647 None:intergenic 45.0%
CATCCTTGGGGGTGATAAAA+GGG - chr7.4:12012586-12012605 None:intergenic 45.0%
CATCTCGGAACACCAAGTTT+CGG - chr7.4:12013889-12013908 None:intergenic 45.0%
CATGCAAATGGAACGAACCT+TGG - chr7.4:12015840-12015859 None:intergenic 45.0%
CCGCATATAAGCAAAGAGCT+TGG - chr7.4:12014634-12014653 None:intergenic 45.0%
CCTCTCATGCAACTCTTCAA+CGG - chr7.4:12014528-12014547 None:intergenic 45.0%
GAATCGGTAAGTATACTCGG+GGG + chr7.4:12015606-12015625 MS.gene052394:intron 45.0%
GGAAATGCCGTTGTTGACAA+GGG + chr7.4:12012419-12012438 MS.gene052394:CDS 45.0%
GGAATCGGTAAGTATACTCG+GGG + chr7.4:12015605-12015624 MS.gene052394:intron 45.0%
GGCACTTCTACATTTGAGGA+AGG - chr7.4:12013254-12013273 None:intergenic 45.0%
GTCAACAACGGCATTTCCAT+TGG - chr7.4:12012417-12012436 None:intergenic 45.0%
GTGGGAAACATTGTGGCAAT+CGG + chr7.4:12014218-12014237 MS.gene052394:CDS 45.0%
TAAGCCAAGGAATCACATGG+TGG - chr7.4:12012877-12012896 None:intergenic 45.0%
TAAGCTGCACCTCAGTTCTT+TGG + chr7.4:12013324-12013343 MS.gene052394:intron 45.0%
TAGTACACCTTGTGCAGTGT+AGG - chr7.4:12014032-12014051 None:intergenic 45.0%
TCACCTGAAGAACCTCTAAG+AGG + chr7.4:12012455-12012474 MS.gene052394:CDS 45.0%
TCATCAACAGGCTCATCCTT+GGG - chr7.4:12012599-12012618 None:intergenic 45.0%
TCATCCTTGGGGGTGATAAA+AGG - chr7.4:12012587-12012606 None:intergenic 45.0%
TGAAGATGTCCACTGACAGA+TGG - chr7.4:12016346-12016365 None:intergenic 45.0%
TGGAAATGCCGTTGTTGACA+AGG + chr7.4:12012418-12012437 MS.gene052394:CDS 45.0%
TGGCCTTTCAAAAGAATCCG+AGG + chr7.4:12013487-12013506 MS.gene052394:CDS 45.0%
TGTCAAGTCTTCTTCTGCCT+CGG + chr7.4:12013571-12013590 MS.gene052394:CDS 45.0%
TGTCATTGAGGCGACACTAT+GGG + chr7.4:12014331-12014350 MS.gene052394:intron 45.0%
TGTGAAGAAACGAGAGCTTG+AGG - chr7.4:12013602-12013621 None:intergenic 45.0%
TGTGGTTGTGGGAAACATTG+TGG + chr7.4:12014211-12014230 MS.gene052394:CDS 45.0%
TTCATCAACAGGCTCATCCT+TGG - chr7.4:12012600-12012619 None:intergenic 45.0%
! AGCAGTCTGGAACTACTTTC+GGG - chr7.4:12012392-12012411 None:intergenic 45.0%
! ATTTTGTGGATCACGGCTGA+TGG - chr7.4:12014083-12014102 None:intergenic 45.0%
! ATTTTTCCACGGTGTCCTTG+TGG + chr7.4:12015184-12015203 MS.gene052394:intron 45.0%
! CACCTGAAGAACCTCTAAGA+GGG + chr7.4:12012456-12012475 MS.gene052394:CDS 45.0%
! GATTTTGCCTACACTGCACA+AGG + chr7.4:12014022-12014041 MS.gene052394:CDS 45.0%
! GTACAACGCATTTTGCTTCC+CGG + chr7.4:12014868-12014887 MS.gene052394:intron 45.0%
! TGATGACGATGATCAGTCTG+TGG + chr7.4:12016485-12016504 MS.gene052394:CDS 45.0%
! TGTGTCTGCTTGGTGGAATT+TGG + chr7.4:12013410-12013429 MS.gene052394:intron 45.0%
! TTACCCTTTTATCACCCCCA+AGG + chr7.4:12012580-12012599 MS.gene052394:CDS 45.0%
! TTCCTGTGCTGCGATTTTTC+TGG - chr7.4:12016181-12016200 None:intergenic 45.0%
! TTGACCTGGGTATGTCGATT+TGG + chr7.4:12016204-12016223 MS.gene052394:intron 45.0%
! TTTCGGGGTATGTAGTGGAA+CGG - chr7.4:12013872-12013891 None:intergenic 45.0%
!! AAAGAGTGCTGGAGCAAATG+TGG + chr7.4:12014193-12014212 MS.gene052394:CDS 45.0%
!! ACTGTACCAGGTTCTGGTTT+CGG - chr7.4:12012368-12012387 None:intergenic 45.0%
!! ATCAGAAAATGGTGGTGGGA+AGG + chr7.4:12013679-12013698 MS.gene052394:CDS 45.0%
!! CATTTAACAGGCGTTGAAGC+CGG + chr7.4:12011987-12012006 MS.gene052394:intron 45.0%
!! GAGGCTAGCTTGGCATTAAA+AGG - chr7.4:12013275-12013294 None:intergenic 45.0%
!! GCAGCTACAACTTTGGGATT+GGG - chr7.4:12011730-12011749 None:intergenic 45.0%
!!! GGACCGGATATTTTTTTGCC+TGG + chr7.4:12013347-12013366 MS.gene052394:intron 45.0%
AAGCTGTGTGATAAGGAGGG+AGG + chr7.4:12015424-12015443 MS.gene052394:intron 50.0%
ACGGAACGCAGCTACAACTT+TGG - chr7.4:12011737-12011756 None:intergenic 50.0%
AGAGGTTCTTCAGGTGATGC+AGG - chr7.4:12012452-12012471 None:intergenic 50.0%
AGCACAGGAAGAGTTGACCT+GGG + chr7.4:12016191-12016210 MS.gene052394:CDS 50.0%
AGCTGCACCTCAGTTCTTTG+GGG + chr7.4:12013326-12013345 MS.gene052394:intron 50.0%
AGCTGTGTGATAAGGAGGGA+GGG + chr7.4:12015425-12015444 MS.gene052394:intron 50.0%
AGGGTCAACCTACGCAACAA+AGG - chr7.4:12016097-12016116 None:intergenic 50.0%
ATCAACAGGCTCATCCTTGG+GGG - chr7.4:12012597-12012616 None:intergenic 50.0%
ATGGACCCTCAACTTCAACC+GGG - chr7.4:12016010-12016029 None:intergenic 50.0%
ATGGGACTCGGGAGTTGTAA+AGG + chr7.4:12014604-12014623 MS.gene052394:CDS 50.0%
CATCAACAGGCTCATCCTTG+GGG - chr7.4:12012598-12012617 None:intergenic 50.0%
CATCCCACCATGTGATTCCT+TGG + chr7.4:12012870-12012889 MS.gene052394:intron 50.0%
CCAAGTTTCGGGGTATGTAG+TGG - chr7.4:12013877-12013896 None:intergenic 50.0%
CCACTACATACCCCGAAACT+TGG + chr7.4:12013874-12013893 MS.gene052394:CDS 50.0%
CCGTTGAAGAGTTGCATGAG+AGG + chr7.4:12014525-12014544 MS.gene052394:CDS 50.0%
CGGAACGCAGCTACAACTTT+GGG - chr7.4:12011736-12011755 None:intergenic 50.0%
CTCCCTCTTAGAGGTTCTTC+AGG - chr7.4:12012461-12012480 None:intergenic 50.0%
GAGATCCCGGTTGAAGTTGA+GGG + chr7.4:12016002-12016021 MS.gene052394:CDS 50.0%
GATGGACCCTCAACTTCAAC+CGG - chr7.4:12016011-12016030 None:intergenic 50.0%
GCAAGATGGCAACAACACTG+TGG + chr7.4:12013184-12013203 MS.gene052394:CDS 50.0%
GCTGGAGCAAATGTGGTTGT+GGG + chr7.4:12014200-12014219 MS.gene052394:CDS 50.0%
GGCAGCATTTCTGTAGACCA+AGG + chr7.4:12015820-12015839 MS.gene052394:intron 50.0%
GGGCTAGACGTAACTGTACT+TGG + chr7.4:12015627-12015646 MS.gene052394:intron 50.0%
GTTGTTGCCATCTTGCTCTC+CGG - chr7.4:12013180-12013199 None:intergenic 50.0%
GTTTCTTCACACTGCCCAAG+TGG + chr7.4:12013611-12013630 MS.gene052394:CDS 50.0%
TACCAAGGCACGACATTGCA+CGG - chr7.4:12011756-12011775 None:intergenic 50.0%
TCTCGGAACACCAAGTTTCG+GGG - chr7.4:12013887-12013906 None:intergenic 50.0%
TGACAGAGGTTCACACCACA+AGG - chr7.4:12015202-12015221 None:intergenic 50.0%
TGAGATCCCGGTTGAAGTTG+AGG + chr7.4:12016001-12016020 MS.gene052394:CDS 50.0%
TGCAGTCGCGTTTAGAGAAC+CGG + chr7.4:12012508-12012527 MS.gene052394:CDS 50.0%
TGCTGGAGCAAATGTGGTTG+TGG + chr7.4:12014199-12014218 MS.gene052394:CDS 50.0%
TTGAGCCACCGCTATTCAGA+AGG - chr7.4:12012319-12012338 None:intergenic 50.0%
TTGGATGCAGAATGGGACTC+GGG + chr7.4:12014593-12014612 MS.gene052394:CDS 50.0%
TTTGACAACAGAGAGGCTCC+TGG - chr7.4:12012542-12012561 None:intergenic 50.0%
! AAGCTAGCCTCATCGTCTAC+GGG + chr7.4:12013284-12013303 MS.gene052394:CDS 50.0%
! ATGGTTAGTTGGCTCTTGGC+CGG + chr7.4:12016320-12016339 MS.gene052394:intron 50.0%
! CAAGCTAGCCTCATCGTCTA+CGG + chr7.4:12013283-12013302 MS.gene052394:CDS 50.0%
! CTACTTTCGGGTACTGTACC+AGG - chr7.4:12012380-12012399 None:intergenic 50.0%
! GAGCTGTTTCGGTGCAAATG+CGG + chr7.4:12016507-12016526 MS.gene052394:CDS 50.0%
! GGATGAGCCTGTTGATGAAG+TGG + chr7.4:12012601-12012620 MS.gene052394:CDS 50.0%
! GTATGTAGTGGAACGGAGGT+GGG - chr7.4:12013865-12013884 None:intergenic 50.0%
!! CGCAGCTACAACTTTGGGAT+TGG - chr7.4:12011731-12011750 None:intergenic 50.0%
!! TACTGTATTTCTGGGTGGCC+AGG + chr7.4:12015888-12015907 MS.gene052394:intron 50.0%
!!! GCTTGTTTTGACATACCGGC+AGG + chr7.4:12015289-12015308 MS.gene052394:intron 50.0%
AAAGGCCTCACTCGCTCTTC+TGG - chr7.4:12012263-12012282 None:intergenic 55.0%
AGAGAACCGGCTGTTGAACC+AGG + chr7.4:12012521-12012540 MS.gene052394:CDS 55.0%
AGGAGGGAGGGAATCATTCC+AGG + chr7.4:12015437-12015456 MS.gene052394:intron 55.0%
ATAGGAAGGGGAGGTGGATG+AGG + chr7.4:12012229-12012248 MS.gene052394:intron 55.0%
ATCCGGTCCCCAAAGAACTG+AGG - chr7.4:12013336-12013355 None:intergenic 55.0%
CAGCACAGGAAGAGTTGACC+TGG + chr7.4:12016190-12016209 MS.gene052394:CDS 55.0%
GATACAGCCGGAGAGCAAGA+TGG + chr7.4:12013170-12013189 MS.gene052394:CDS 55.0%
GATGTCCACTGACAGATGGC+CGG - chr7.4:12016342-12016361 None:intergenic 55.0%
GGAGGGAGGGAATCATTCCA+GGG + chr7.4:12015438-12015457 MS.gene052394:intron 55.0%
GGCAATCGGATTGTCCAACG+TGG + chr7.4:12014232-12014251 MS.gene052394:CDS 55.0%
GGTGGGATGCCATCAAATGC+CGG - chr7.4:12012859-12012878 None:intergenic 55.0%
GGTTCTCTAAACGCGACTGC+AGG - chr7.4:12012509-12012528 None:intergenic 55.0%
GTGGGGTCTTCGTACCTTAG+AGG + chr7.4:12014454-12014473 MS.gene052394:CDS 55.0%
TACCTCTCCCGTAGACGATG+AGG - chr7.4:12013294-12013313 None:intergenic 55.0%
TTCACACCACAAGGACACCG+TGG - chr7.4:12015193-12015212 None:intergenic 55.0%
TTCCGTGCAATGTCGTGCCT+TGG + chr7.4:12011751-12011770 MS.gene052394:CDS 55.0%
! AGCGAGTGAGGCCTTTGAAG+AGG + chr7.4:12012267-12012286 MS.gene052394:CDS 55.0%
! CACCTCAGTTCTTTGGGGAC+CGG + chr7.4:12013331-12013350 MS.gene052394:intron 55.0%
! CGTAGACGATGAGGCTAGCT+TGG - chr7.4:12013285-12013304 None:intergenic 55.0%
! GGTATGTAGTGGAACGGAGG+TGG - chr7.4:12013866-12013885 None:intergenic 55.0%
! TCGGGTACTGTACCAGGTTC+TGG - chr7.4:12012374-12012393 None:intergenic 55.0%
!! AATGGTGGTGGGAAGGAGTC+AGG + chr7.4:12013686-12013705 MS.gene052394:CDS 55.0%
!! ATGGTGGTGGGAAGGAGTCA+GGG + chr7.4:12013687-12013706 MS.gene052394:CDS 55.0%
!! TATTCAGAAGGCGCCCGTCT+TGG - chr7.4:12012307-12012326 None:intergenic 55.0%
AGCCTCATCGTCTACGGGAG+AGG + chr7.4:12013289-12013308 MS.gene052394:CDS 60.0%
CTCGTCCAGAAGAGCGAGTG+AGG + chr7.4:12012255-12012274 MS.gene052394:CDS 60.0%
GACGGGCGCCTTCTGAATAG+CGG + chr7.4:12012308-12012327 MS.gene052394:CDS 60.0%
GAGGCTCCTGGTTCAACAGC+CGG - chr7.4:12012530-12012549 None:intergenic 60.0%
! CGGGGTATGTAGTGGAACGG+AGG - chr7.4:12013869-12013888 None:intergenic 60.0%
!! TGGTGGTGGGAAGGAGTCAG+GGG + chr7.4:12013688-12013707 MS.gene052394:CDS 60.0%
CTTGGCCGGCCATCTGTCAG+TGG + chr7.4:12016334-12016353 MS.gene052394:intron 65.0%
GAGAGCTTGAGGTGCGACCG+AGG - chr7.4:12013591-12013610 None:intergenic 65.0%
GGGCGCCTTCTGAATAGCGG+TGG + chr7.4:12012311-12012330 MS.gene052394:CDS 65.0%
!! ACAGGCGTTGAAGCCGGAGC+AGG + chr7.4:12011993-12012012 MS.gene052394:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 12011721 12016564 12011721 ID=MS.gene052394
chr7.4 mRNA 12011721 12016564 12011721 ID=MS.gene052394.t1;Parent=MS.gene052394
chr7.4 exon 12011721 12011903 12011721 ID=MS.gene052394.t1.exon1;Parent=MS.gene052394.t1
chr7.4 CDS 12011721 12011903 12011721 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12011997 12012029 12011997 ID=MS.gene052394.t1.exon2;Parent=MS.gene052394.t1
chr7.4 CDS 12011997 12012029 12011997 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12012233 12012659 12012233 ID=MS.gene052394.t1.exon3;Parent=MS.gene052394.t1
chr7.4 CDS 12012233 12012659 12012233 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12013135 12013310 12013135 ID=MS.gene052394.t1.exon4;Parent=MS.gene052394.t1
chr7.4 CDS 12013135 12013310 12013135 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12013458 12014273 12013458 ID=MS.gene052394.t1.exon5;Parent=MS.gene052394.t1
chr7.4 CDS 12013458 12014273 12013458 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12014428 12014690 12014428 ID=MS.gene052394.t1.exon6;Parent=MS.gene052394.t1
chr7.4 CDS 12014428 12014690 12014428 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12015980 12016046 12015980 ID=MS.gene052394.t1.exon7;Parent=MS.gene052394.t1
chr7.4 CDS 12015980 12016046 12015980 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12016162 12016212 12016162 ID=MS.gene052394.t1.exon8;Parent=MS.gene052394.t1
chr7.4 CDS 12016162 12016212 12016162 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
chr7.4 exon 12016468 12016564 12016468 ID=MS.gene052394.t1.exon9;Parent=MS.gene052394.t1
chr7.4 CDS 12016468 12016564 12016468 ID=cds.MS.gene052394.t1;Parent=MS.gene052394.t1
Gene Sequence

>MS.gene052394

ATGGCACCCAATCCCAAAGTTGTAGCTGCGTTCCGTGCAATGTCGTGCCTTGGTATTGAGGAACACAAAGTCAAACCTGTGTTGAAGAAACTGCTTAAATTGTATGATAAAAACTGGGAGCTTATTGAAGAAGAGAATTATCGGGCTCTTGCTGATGCTATTTTCGACGAAGATGATAATCAGGTTTATAATTATACTATACTGTACTATCTCTTGCATTCACATGTTATGTATCTGGTTTTGTTTGTTTATTCACTGTTTTATATCATTTAACAGGCGTTGAAGCCGGAGCAGGAAAAGAAAAACAAGGTTGACGTTCGCAAAACTTGTTAATTGTTACTCCCTCCGGTCTATACATCATACATTAGTTATTCAATGAAACTGAAAAAAAAGAATCTTTTCTTATATTTGAGACCGGATGGAGAATTATATAATGTTGAGTTTGTCTGTGTTTCTTTGTTACTGTTAATTCTATGGCTGCTGAAATGTGTTAGGGTTTTTCAAACATATAGGAAGGGGAGGTGGATGAGGAAGCTCGTCCAGAAGAGCGAGTGAGGCCTTTGAAGAGGTTGAAATTAAGAGGCCAAGACGGGCGCCTTCTGAATAGCGGTGGCTCAAGTACAGCTGCCTTTGCATTGAAAACACCGAAACCAGAACCTGGTACAGTACCCGAAAGTAGTTCCAGACTGCTATCCAATGGAAATGCCGTTGTTGACAAGGGAAAGAAGCCTGCATCACCTGAAGAACCTCTAAGAGGGAGAAGATCTATATCTGACAGAACTCAACCTGCAGTCGCGTTTAGAGAACCGGCTGTTGAACCAGGAGCCTCTCTGTTGTCAAAAAGCAAAACGCCTCATGCTTACCCTTTTATCACCCCCAAGGATGAGCCTGTTGATGAAGTGGAATATGATTACGTCCCACTTTCAATTATTCTTCCTGGTAATTAACTGACTATGCCTTCAAAAGAAGTTTTTTCCTTTTCACGGTTTTTAGCGTTTGGTGTAATATCGACATGTCAAAGTTTACTTATGTTAAATCCAATAATAAGTATTGTATATTGCTGGTTCAAATTTTGGCTCGACTTTGAATTAGTTATAGTTGCGATGAACCTGATTGATTTTTTGCCCTTTAAATTCCGGCATTTGATGGCATCCCACCATGTGATTCCTTGGCTTATGTTATATGCAATTCTCCACTTGCATATTGTACTACTTCTGCATTTCCAGAAAGCTCTTTTTAAGACAGTTTCTGTTTTCTGTTACACCAGAAATGGTCTTTTTATTGTGATCTACAAAAAAAATGTTACCTTTGTGCCATTTATCTTTCTTCTACACATTCTATTGCGGACTCTGCATACATTTCTGTATTAATGATTGTTTGATCAGTTTTCTTTTGATTTATTTTCCTTCAAAAGAACCATCAAGTGTTCCAGATTCTTCAACGAAGAATGATACAGCCGGAGAGCAAGATGGCAACAACACTGTGGCATCACCATACAGAAACGAAAATGTTGAAGGTGAAGATATTCTTCCTTCCTCAAATGTAGAAGTGCCTTTTAATGCCAAGCTAGCCTCATCGTCTACGGGAGAGGTAACATTTTCTCTAAGCTGCACCTCAGTTCTTTGGGGACCGGATATTTTTTTGCCTGGTCATGATCCAAGTCTAAAAACTGCAATGTTGAGATATATGTGTGTCTGCTTGGTGGAATTTGGAACTGATTTGAATAATACTTTGCAGGAAGCATCTGTAAAGATAACGCCAACAGTTGGCCTTTCAAAAGAATCCGAGGCAAATGGCTCACTAATTGACGGAGGAAATAAAGATTCTTCTGTTGCAAATGGATCAATCTCTGTCAAGTCTTCTTCTGCCTCGGTCGCACCTCAAGCTCTCGTTTCTTCACACTGCCCAAGTGGTCCAAATGATGCTGTACTAGTTTCCAAGGATGTAATGAATGATTTATCAGAAAATGGTGGTGGGAAGGAGTCAGGGGAACCTATGCCTCAAAATTCCTGCAATGTAATGAATGCTCCAAACCATCATCATACAATTGATGATACAAGGGCTGTTTGTGCTACCAATGACCTAACAAAGGGAGAAGAAAAAGTGAAAATTTCATGGGTGAATGATTCTAATAATGATATCCCACCTCCGTTCCACTACATACCCCGAAACTTGGTGTTCCGAGATGCATATGTTAATATGTCTCTATCTCGTATTGGGAGTGAAGATTGTTGTTCTACCTGTATGGGCAATTGTGTCTTATCATCTAAACCATGTTCTTGTGCAAATAAAACTGGAGGGGATTTTGCCTACACTGCACAAGGTGTACTAAAGGAAGAGTTCGTGGAAGAGTGTATTGCCATCAGCCGTGATCCACAAAATCATTCCTATTGCACAGAATGCCCACTTGAAATATCAAAGAATGATGGTTGTTTAGAACCATGTAAAGGACACTTGAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGTTGTGGGAAACATTGTGGCAATCGGATTGTCCAACGTGGAATAACTTGCAACTTGCAGGTGATTGTTTGAGTAATCTTCACTACTTGTAAACAAATATATATTTTTCGATGTTGATGTCATTGAGGCGACACTATGGGTTTCTTTCTGTTCTTAAACACATTTCCCTTAACATATTTAGACATCTTTGCTCTAATGATTACGTGCTACTCAGGTGTTTTTAACTTCAAACGGAAAAGGGTGGGGTCTTCGTACCTTAGAGGATCTTCCAAAAGGTGCATTTGTATGCGAGTTTGTTGGAGAAATTTTAACCGTTGAAGAGTTGCATGAGAGGAACTTGAAATATCCCAAAAATGGGAAACATACGTTCCCAATTTTATTGGATGCAGAATGGGACTCGGGAGTTGTAAAGGATAACCAAGCTCTTTGCTTATATGCGGCATCATATGGAAATGCTGCTAGGTTTATTAATCACAGGTATTACAATTTCTCATGTTTTAACAGAAGTTTTTTGTGATTATTTTTTGAAAAGTAATTACTTGGATTATTGATTTTTTTTTTTTTAATAAAATGAATGAATCCTTAGCAATTTAGTCTTGTTGATGTTGATTGCGTTTGCATCAGTGTTTTCTTCTGATTAATGATCTTAGAATAGTACAACGCATTTTGCTTCCCGGTTTAGTTCATCAACCTTATAATTAATTTCAACTCAAACAAGTGACCACCATGTCAAAATATCAAACTGAGCAAAGAACAACTCAATCATTTTAGAGAATAACTTGTAAAGATTTGAATACTTTGGGTTCAATATTGTGTAAGCAAGTGACTTGTCAAATATCAAACTGAGCAAAGAACAACAATCATTTTAGAGAATAACTTGTAAAGATTTGAATACTTTGGGTTCAATATTGTGTAAGCAAGTGACTTGTCAACCTTTTCAACCATGGAGTGAAACTCGTCTTATAACTAAATTTTTCCACGGTGTCCTTGTGGTGTGAACCTCTGTCATTTCTATGGTATGTATTGGGTTCGTCATTACAAGTTTTTAACAATTGTTCTGTTCTTCACACACTTTGCTTGTTTTGACATACCGGCAGGAGTAGATTATGAATAAGGAAAAAAAGTTCCAATTTCTAATTGTTTTCATAGAATAAACTCATGCCTAATGTAAGAAGACAAAATGTCAGGCCAGAAACGATTCAACTTAAACAAGCTGTGTGATAAGGAGGGAGGGAATCATTCCAGGGAAAATAATTTTGATATATATATATATATATATCTGTGTGTGTGTAATAAGATAAATAATTTATTTTGAGAAAGTGGAAGATGTTCACTATTCTAGTGCTGACTGATTAGATGAAAGCCTGAAACTGATAAAATCTGGGGAACATGGAATCGGTAAGTATACTCGGGGGGCTAGACGTAACTGTACTTGGTTTTTAATTTTTGAATAAGGCTTTTGGTTTTGTGTAGTTGAGTTAGGCCAAACCAAATTCCAAGAGTGTTGTTTTTAAATTGCCCAGACAAAAAGTACCTAACATAAAATATGAAGCATAATTAGGGTGAAAGTGGTTCAGTTTAATAATGGACAGATTGGGAAATTAGTGGCAGCATTTCTGTAGACCAAGGTTCGTTCCATTTGCATGCTATTGACAATATGCTTATTTTACTGTTTACTGTATTTCTGGGTGGCCAGGCAGACACTTAAATCATAATTTGCAATTGTAAATTAGAAGATTCTCAGTAATTCTATCCCGTTATGGCAGATGTTTAGATGCAAACTTGATTGAGATCCCGGTTGAAGTTGAGGGTCCATCTCATCACTATTATCATGTGAGAAGTTGGCAAATTCTCAAAATTCAAGTTGTCATTTATAATTACCTTTGTTGCGTAGGTTGACCCTTTAGAAACCTTGCTAACTGATGTCTTTGAATGTTGAAACATGCAGTTTGCCTTCTTCACATCCAGAAAAATCGCAGCACAGGAAGAGTTGACCTGGGTATGTCGATTTGGTTCTGTAATATGTTTGGTGTATTTAGTGAATCATGATTGATATAAAGCTTTTTATTTGGTACTTGGCTACTGAATTGAAAAATGCCATATACAATGGTTAGTTGGCTCTTGGCCGGCCATCTGTCAGTGGACATCTTCATTGCTTCTCATTTTTGTGTAATTCACTTTCTTTGGATTGTTTACATATGCAGGACTTGATTTTTCGTCTCTAGAAAAGCTTATGTGCATAGTGTTTTTGCAGGATTATGGTATCGATTTTGATGACGATGATCAGTCTGTGGAGCTGTTTCGGTGCAAATGCGGCAGTAAATTCTGCAGGAATATGAAGCGCTCAAATA
Protein sequence

>MS.gene052394.t1

MAPNPKVVAAFRAMSCLGIEEHKVKPVLKKLLKLYDKNWELIEEENYRALADAIFDEDDNQALKPEQEKKNKEGEVDEEARPEERVRPLKRLKLRGQDGRLLNSGGSSTAAFALKTPKPEPGTVPESSSRLLSNGNAVVDKGKKPASPEEPLRGRRSISDRTQPAVAFREPAVEPGASLLSKSKTPHAYPFITPKDEPVDEVEYDYVPLSIILPEPSSVPDSSTKNDTAGEQDGNNTVASPYRNENVEGEDILPSSNVEVPFNAKLASSSTGEEASVKITPTVGLSKESEANGSLIDGGNKDSSVANGSISVKSSSASVAPQALVSSHCPSGPNDAVLVSKDVMNDLSENGGGKESGEPMPQNSCNVMNAPNHHHTIDDTRAVCATNDLTKGEEKVKISWVNDSNNDIPPPFHYIPRNLVFRDAYVNMSLSRIGSEDCCSTCMGNCVLSSKPCSCANKTGGDFAYTAQGVLKEEFVEECIAISRDPQNHSYCTECPLEISKNDGCLEPCKGHLKRKFIKECWSKCGCGKHCGNRIVQRGITCNLQVFLTSNGKGWGLRTLEDLPKGAFVCEFVGEILTVEELHERNLKYPKNGKHTFPILLDAEWDSGVVKDNQALCLYAASYGNAARFINHRCLDANLIEIPVEVEGPSHHYYHFAFFTSRKIAAQEELTWDYGIDFDDDDQSVELFRCKCGSKFCRNMKRSN