AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89554

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89554.t1 MTR_1g069570 96.438 758 27 0 1 758 1 758 0.0 1524
MS.gene89554.t1 MTR_1g069570 96.160 677 26 0 1 677 1 677 0.0 1348
MS.gene89554.t1 MTR_7g098390 51.020 784 280 21 5 757 3 713 0.0 649
MS.gene89554.t1 MTR_1g080340 52.323 409 184 9 345 746 182 586 1.76e-144 437
MS.gene89554.t1 MTR_1g080340 27.206 272 143 11 6 255 4 242 9.25e-12 68.9
MS.gene89554.t1 MTR_8g106570 50.698 215 82 6 418 629 106 299 3.83e-62 211
MS.gene89554.t1 MTR_1g064770 74.286 70 18 0 553 622 22 91 6.87e-34 125
MS.gene89554.t1 MTR_5g013420 30.303 330 160 11 428 741 809 1084 1.88e-32 135
MS.gene89554.t1 MTR_5g013420 30.303 330 160 11 428 741 809 1084 2.09e-32 135
MS.gene89554.t1 MTR_7g052480 28.824 340 158 13 430 742 270 552 1.15e-30 127
MS.gene89554.t1 MTR_7g088370 29.909 331 151 10 430 743 436 702 6.28e-30 127
MS.gene89554.t1 MTR_3g011440 28.487 337 169 10 428 742 374 660 2.57e-29 124
MS.gene89554.t1 MTR_8g078505 37.158 183 103 5 561 741 361 533 1.61e-28 121
MS.gene89554.t1 MTR_8g042750 27.976 336 173 10 428 744 401 686 1.14e-27 119
MS.gene89554.t1 MTR_4g010830 29.254 335 157 14 428 741 700 975 3.12e-27 119
MS.gene89554.t1 MTR_8g078490 36.413 184 110 4 561 743 1073 1250 2.50e-26 116
MS.gene89554.t1 MTR_7g084090 34.615 208 107 5 559 742 551 753 2.06e-25 112
MS.gene89554.t1 MTR_5g018850 36.413 184 108 6 561 742 1327 1503 3.03e-25 113
MS.gene89554.t1 MTR_4g132610 37.234 188 101 7 561 742 867 1043 8.48e-25 111
MS.gene89554.t1 MTR_6g061270 35.071 211 102 7 559 742 488 690 1.31e-23 107
MS.gene89554.t1 MTR_6g061200 28.895 353 184 12 395 742 371 661 1.70e-23 106
MS.gene89554.t1 MTR_4g010550 28.283 297 152 8 449 741 220 459 2.18e-23 104
MS.gene89554.t1 MTR_1g048950 29.560 318 151 11 428 741 280 528 4.53e-21 98.2
MS.gene89554.t1 MTR_8g070070 26.688 311 148 12 430 720 507 757 1.82e-20 97.1
MS.gene89554.t1 MTR_8g070075 25.402 311 152 11 430 720 500 750 1.97e-19 94.0
MS.gene89554.t1 MTR_1g035420 25.079 315 156 11 430 724 396 650 2.36e-18 90.1
MS.gene89554.t1 MTR_6g027690 32.500 160 102 3 563 719 241 397 6.83e-18 87.4
MS.gene89554.t1 MTR_6g044690 29.545 176 109 4 559 721 392 565 9.28e-18 87.8
MS.gene89554.t1 MTR_6g043960 29.545 176 109 4 559 721 310 483 3.15e-17 85.9
MS.gene89554.t1 MTR_3g088625 31.068 206 99 8 548 742 1288 1461 5.50e-17 86.7
MS.gene89554.t1 MTR_3g088625 31.068 206 99 8 548 742 1182 1355 5.64e-17 86.7
MS.gene89554.t1 MTR_2g054460 28.736 174 109 4 561 721 294 465 5.97e-16 81.6
MS.gene89554.t1 MTR_7g445600 33.333 135 63 3 584 718 248 355 6.13e-15 77.4
MS.gene89554.t1 MTR_7g445710 29.412 221 93 9 568 741 334 538 9.42e-15 78.2
MS.gene89554.t1 MTR_1g098370 29.412 238 122 10 511 741 35 233 4.36e-14 75.9
MS.gene89554.t1 MTR_7g450730 31.148 183 113 6 568 741 322 500 4.86e-14 75.9
MS.gene89554.t1 MTR_7g445530 29.744 195 77 8 568 718 334 512 1.26e-12 71.2
MS.gene89554.t1 MTR_1g098000 28.492 179 96 6 569 741 78 230 2.12e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89554.t1 AT5G43990 40.329 791 342 23 5 749 3 709 1.87e-167 500
MS.gene89554.t1 AT5G43990 40.329 791 342 23 5 749 3 709 1.87e-167 500
MS.gene89554.t1 AT5G43990 40.329 791 342 23 5 749 3 709 1.87e-167 500
MS.gene89554.t1 AT5G43990 40.329 791 342 23 5 749 3 709 1.87e-167 500
MS.gene89554.t1 AT5G43990 40.329 791 342 23 5 749 26 732 2.59e-167 500
MS.gene89554.t1 AT5G43990 40.329 791 342 23 5 749 26 732 2.59e-167 500
MS.gene89554.t1 AT5G43990 40.439 774 345 21 5 749 3 689 2.65e-164 491
MS.gene89554.t1 AT5G43990 40.439 774 345 21 5 749 3 689 2.65e-164 491
MS.gene89554.t1 AT5G43990 40.439 774 345 21 5 749 3 689 2.65e-164 491
MS.gene89554.t1 AT5G43990 40.439 774 345 21 5 749 3 689 2.65e-164 491
MS.gene89554.t1 AT5G43990 40.439 774 345 21 5 749 26 712 5.78e-164 491
MS.gene89554.t1 AT5G43990 40.439 774 345 21 5 749 26 712 5.78e-164 491
MS.gene89554.t1 AT5G43990 40.028 717 314 22 63 749 10 640 4.41e-148 447
MS.gene89554.t1 AT5G43990 40.028 717 314 22 63 749 10 640 4.41e-148 447
MS.gene89554.t1 AT5G43990 40.028 717 314 22 63 749 10 640 4.41e-148 447
MS.gene89554.t1 AT5G43990 40.028 717 314 22 63 749 10 640 4.41e-148 447
MS.gene89554.t1 AT5G43990 40.143 700 317 20 63 749 10 620 8.75e-145 439
MS.gene89554.t1 AT3G04380 52.661 357 162 7 393 745 81 434 1.26e-126 386
MS.gene89554.t1 AT1G04050 54.416 351 150 6 406 752 281 625 2.36e-126 391
MS.gene89554.t1 AT1G04050 31.977 172 95 7 228 380 176 344 1.45e-11 68.6
MS.gene89554.t1 AT3G04380 53.602 347 154 7 403 745 118 461 2.38e-126 386
MS.gene89554.t1 AT3G04380 52.661 357 162 7 393 745 81 434 2.63e-126 385
MS.gene89554.t1 AT3G04380 53.602 347 154 7 403 745 102 445 2.90e-126 385
MS.gene89554.t1 AT3G04380 52.661 357 162 7 393 745 65 418 4.16e-126 384
MS.gene89554.t1 AT3G04380 53.602 347 154 7 403 745 118 461 4.58e-126 385
MS.gene89554.t1 AT1G04050 54.416 351 150 6 406 752 385 729 1.01e-125 392
MS.gene89554.t1 AT1G04050 31.977 172 95 7 228 380 280 448 1.29e-11 68.6
MS.gene89554.t1 AT1G04050 54.416 351 150 6 406 752 385 729 1.01e-125 392
MS.gene89554.t1 AT1G04050 31.977 172 95 7 228 380 280 448 1.29e-11 68.6
MS.gene89554.t1 AT2G23740 38.947 190 100 6 562 744 1200 1380 1.99e-28 123
MS.gene89554.t1 AT2G23740 38.947 190 100 6 562 744 1200 1380 1.99e-28 123
MS.gene89554.t1 AT2G23740 38.947 190 100 6 562 744 1200 1380 1.99e-28 123
MS.gene89554.t1 AT2G23740 38.947 190 100 6 562 744 1193 1373 2.04e-28 123
MS.gene89554.t1 AT1G73100 30.816 331 160 13 430 742 386 665 2.03e-27 119
MS.gene89554.t1 AT2G35160 29.206 315 152 11 430 741 543 789 1.60e-26 116
MS.gene89554.t1 AT2G35160 29.206 315 152 11 430 741 543 789 1.60e-26 116
MS.gene89554.t1 AT2G35160 29.206 315 152 11 430 741 543 789 1.60e-26 116
MS.gene89554.t1 AT2G35160 29.206 315 152 11 430 741 543 789 1.60e-26 116
MS.gene89554.t1 AT2G35160 29.206 315 152 11 430 741 507 753 1.70e-26 116
MS.gene89554.t1 AT2G22740 28.267 329 169 10 430 742 509 786 3.58e-25 112
MS.gene89554.t1 AT2G22740 28.267 329 169 10 430 742 509 786 3.58e-25 112
MS.gene89554.t1 AT5G04940 27.795 331 169 12 430 742 388 666 3.74e-24 108
MS.gene89554.t1 AT5G04940 27.795 331 169 12 430 742 388 666 3.74e-24 108
MS.gene89554.t1 AT3G03750 34.392 189 101 8 564 741 169 345 5.55e-22 99.0
MS.gene89554.t1 AT1G17770 32.836 201 117 7 558 742 491 689 1.04e-21 100
MS.gene89554.t1 AT2G23740 43.220 118 63 3 562 677 1200 1315 1.21e-20 98.2
MS.gene89554.t1 AT2G23740 43.220 118 63 3 562 677 1200 1315 1.21e-20 98.2
MS.gene89554.t1 AT4G13460 26.791 321 154 15 421 720 378 638 3.75e-18 89.4
MS.gene89554.t1 AT4G13460 26.791 321 154 15 421 720 378 638 3.75e-18 89.4
MS.gene89554.t1 AT2G33290 25.484 310 154 11 430 720 388 639 5.80e-16 82.4
MS.gene89554.t1 AT2G33290 25.484 310 154 11 430 720 388 639 5.80e-16 82.4
MS.gene89554.t1 AT2G33290 25.484 310 154 11 430 720 388 639 5.80e-16 82.4
MS.gene89554.t1 AT2G33290 25.484 310 154 11 430 720 388 639 5.80e-16 82.4
MS.gene89554.t1 AT2G24740 29.787 188 114 6 571 742 566 751 9.22e-15 79.0
MS.gene89554.t1 AT1G77300 28.311 219 111 10 535 742 980 1163 1.23e-14 79.0
MS.gene89554.t1 AT1G77300 28.311 219 111 10 535 742 980 1163 1.90e-14 78.2
MS.gene89554.t1 AT1G76710 28.492 179 96 6 569 741 72 224 3.72e-14 76.3
MS.gene89554.t1 AT1G76710 28.492 179 96 6 569 741 72 224 3.72e-14 76.3
MS.gene89554.t1 AT1G76710 28.492 179 96 6 569 741 72 224 5.11e-14 75.9
MS.gene89554.t1 AT1G76710 28.492 179 96 6 569 741 72 224 5.68e-14 75.9
MS.gene89554.t1 AT3G03750 28.947 190 94 7 564 741 169 329 3.90e-13 72.0

Find 179 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGCGCTGCTATGTTTC+TGG 0.156141 1.1:-51290977 None:intergenic
CCTCTCATGCAACTCTTTAA+TGG 0.157207 1.1:-51289592 None:intergenic
CTATGTTTCTGGTGGTAAAA+AGG 0.198580 1.1:-51290966 None:intergenic
GAGCTGCAGCTCAGCTCTTC+AGG 0.210314 1.1:+51288257 MS.gene89554:CDS
ACTACTAAACTGAGTGAATT+TGG 0.220484 1.1:-51288723 None:intergenic
AGAGAACTATAGAGCTTTAT+TGG 0.221245 1.1:+51286797 MS.gene89554:CDS
TCATCAACGGGCTCAGATTT+AGG 0.222684 1.1:-51287373 None:intergenic
ACATTTCTCTATCTCGTATT+GGG 0.243654 1.1:+51288922 MS.gene89554:CDS
AACATGAAATGTGCTGAAAA+TGG 0.265651 1.1:+51289615 MS.gene89554:CDS
CTCCAGGCAATGACAGAGTT+TGG 0.318416 1.1:+51286696 MS.gene89554:CDS
CCACTTCTTTACGTGTGTTA+TGG 0.320200 1.1:-51288182 None:intergenic
TCTGGACACTCAATTTGAAT+TGG 0.327457 1.1:-51290807 None:intergenic
GAATAGCGCCTTAAGCTTGA+TGG 0.331994 1.1:-51288102 None:intergenic
CTCTGATGGGCTGGTGAAAA+GGG 0.332393 1.1:-51288606 None:intergenic
AACATTTCTCTATCTCGTAT+TGG 0.338243 1.1:+51288921 MS.gene89554:CDS
TGTGCCTGTACATATAAAAC+TGG 0.340913 1.1:+51288999 MS.gene89554:CDS
TTGAAAAGATTGAGATTAAG+AGG 0.343197 1.1:+51287133 MS.gene89554:CDS
CATCTCGGAACACAAGGTTT+TGG 0.345064 1.1:-51288890 None:intergenic
CTCTTCAAGTGTCCTTTACA+TGG 0.346446 1.1:-51289167 None:intergenic
CATTGTGGGCAGTAAGGATT+TGG 0.349231 1.1:+51288512 MS.gene89554:CDS
TACAGCTCAAGGCCTAATTA+AGG 0.350606 1.1:+51289037 MS.gene89554:CDS
GTCAAAGAGTGATGGTTGTT+TGG 0.362693 1.1:+51289142 MS.gene89554:CDS
CTGGACACTCAATTTGAATT+GGG 0.363904 1.1:-51290806 None:intergenic
ACTAGGTCTGCGTTAATTGC+TGG 0.366002 1.1:+51291753 MS.gene89554:CDS
GAAAGTTTATTAAAGAATGT+TGG 0.367343 1.1:+51289189 MS.gene89554:CDS
TGCTTAGATGCAGCGTCCTT+TGG 0.374054 1.1:+51289708 MS.gene89554:CDS
ATGGTGTTTCTGCAGGATTA+TGG 0.382711 1.1:+51291355 MS.gene89554:intron
CACTCCGCATCCAGTAGAAC+TGG 0.383967 1.1:-51289651 None:intergenic
TGAGTAGGCATGCGGAAATC+TGG 0.394448 1.1:-51288282 None:intergenic
GCTCTGATGGGCTGGTGAAA+AGG 0.396124 1.1:-51288607 None:intergenic
ACCAGCCCATCAGAGCAGTT+TGG 0.397557 1.1:+51288614 MS.gene89554:CDS
GATGACACTGCGTTGTTTCG+AGG 0.400594 1.1:-51287250 None:intergenic
TCCAGGCAATGACAGAGTTT+GGG 0.403416 1.1:+51286697 MS.gene89554:CDS
TACTGGTTTCCGAGATGAAC+AGG 0.403963 1.1:+51288646 MS.gene89554:CDS
TCTATGTGAGACTTCTTCAA+TGG 0.406075 1.1:-51287190 None:intergenic
CAGATGTTCTGATGCAAACT+TGG 0.408144 1.1:+51290776 MS.gene89554:intron
AAGAGAATAATCAAATTTCA+TGG 0.413531 1.1:+51288817 MS.gene89554:CDS
GCATTTGTGTGTGAGTTTGC+TGG 0.417110 1.1:+51289558 MS.gene89554:CDS
CAGCGCATGAAGAGCTCACT+TGG 0.418578 1.1:+51290989 MS.gene89554:CDS
TCACACACAAATGCTCCTTT+TGG 0.419691 1.1:-51289549 None:intergenic
ATCTACTTACCCAGTTCTAC+TGG 0.430711 1.1:+51289641 MS.gene89554:CDS
TGGAATAACATACAACTTGC+AGG 0.432287 1.1:+51289259 MS.gene89554:CDS
AGTCTACAGAAGATCGTATA+AGG 0.434173 1.1:+51288760 MS.gene89554:CDS
TCCTGAAGCAAAAGTGAAAC+GGG 0.434933 1.1:+51286722 MS.gene89554:CDS
CTATGTGAGACTTCTTCAAT+GGG 0.437903 1.1:-51287189 None:intergenic
CATCATCCAAACTGCTCTGA+TGG 0.438786 1.1:-51288620 None:intergenic
ATGGGGACTTCGTACCTTAG+AGG 0.440946 1.1:+51289521 MS.gene89554:CDS
ATGCAGAACCATCAAGCTTA+AGG 0.443752 1.1:+51288094 MS.gene89554:intron
CAAGCTTAAGGCGCTATTCA+AGG 0.444240 1.1:+51288106 MS.gene89554:CDS
TCCAAACTGCTCTGATGGGC+TGG 0.448015 1.1:-51288615 None:intergenic
CAGTTTGGATGATGCTGTAC+TGG 0.448999 1.1:+51288629 MS.gene89554:CDS
GAGGACAGTTGTTCCTGTAT+AGG 0.451056 1.1:+51288948 MS.gene89554:CDS
ACGGGTTCTCACTCATCAAA+TGG 0.451201 1.1:+51288537 MS.gene89554:CDS
TCCTTACTGCCCACAATGGC+GGG 0.451219 1.1:-51288507 None:intergenic
TCATAATCTTCCTCATCAAC+GGG 0.455912 1.1:-51287385 None:intergenic
TCCCAAACTCTGTCATTGCC+TGG 0.460190 1.1:-51286698 None:intergenic
GATGGCACACCCGCCATTGT+GGG 0.460269 1.1:+51288498 MS.gene89554:CDS
GCCATCAACCTCAGATTCCT+TGG 0.460375 1.1:-51288481 None:intergenic
AACATTTAACGGAGCATCCT+CGG 0.461944 1.1:-51287095 None:intergenic
AGCTGCAGCTCAGCTCTTCA+GGG 0.466371 1.1:+51288258 MS.gene89554:CDS
CAGTAAAAGCAATGCTGTTG+AGG 0.466634 1.1:-51289098 None:intergenic
TTGGATGCTATATTTGAAGA+AGG 0.467640 1.1:+51286816 MS.gene89554:CDS
TCCGAGATGAACAGGACAAT+TGG 0.468652 1.1:+51288654 MS.gene89554:CDS
CAAGATGCAACTTCCTATAC+AGG 0.475226 1.1:-51288961 None:intergenic
TAAGAAGCATGCGGTGATGC+AGG 0.478397 1.1:-51287337 None:intergenic
TGGGGTATGTAGTTGAAAGG+TGG 0.478541 1.1:-51288870 None:intergenic
TTTGGAGACACGGGATCCTC+CGG 0.478825 1.1:-51288705 None:intergenic
TGTGATAGCCTCTTCAGCTC+AGG 0.484761 1.1:+51288215 MS.gene89554:CDS
AGAACAACTTCTTAAGATGA+TGG 0.486990 1.1:+51288305 MS.gene89554:CDS
ACAGTTTGACAGGTTGATCA+TGG 0.487440 1.1:-51291393 None:intergenic
CGAGCAGATTCAACATTTAA+CGG 0.488022 1.1:-51287106 None:intergenic
TTAAGAAGTTGTTCTTGAGT+AGG 0.488882 1.1:-51288297 None:intergenic
ACCCGCCATTGTGGGCAGTA+AGG 0.490950 1.1:+51288506 MS.gene89554:CDS
ACATGATAGTAGTAACGATC+TGG 0.492019 1.1:-51290825 None:intergenic
ATGGGGAAGAAGCTGAGCTA+GGG 0.492408 1.1:-51287171 None:intergenic
GGAAGAAGAGATGGAGGCCG+AGG 0.496811 1.1:+51287078 MS.gene89554:intron
TACTTCTCCCTGAGCTGAAG+AGG 0.498970 1.1:-51288223 None:intergenic
GAAGAAGTCTCACATAGAAA+AGG 0.499568 1.1:+51287195 MS.gene89554:CDS
TTCCTGAAGCAAAAGTGAAA+CGG 0.501547 1.1:+51286721 MS.gene89554:CDS
GATGTTAGTGACCTTACAAA+AGG 0.503486 1.1:+51288792 MS.gene89554:CDS
TGCGAGATGCTAGTTATGAC+AGG 0.503811 1.1:+51287305 MS.gene89554:CDS
AATGGGGAAGAAGCTGAGCT+AGG 0.506879 1.1:-51287172 None:intergenic
TGATGGCACACCCGCCATTG+TGG 0.514482 1.1:+51288497 MS.gene89554:CDS
ACATGAAATGTGCTGAAAAT+GGG 0.514519 1.1:+51289616 MS.gene89554:CDS
CTCATAATCTTCCTCATCAA+CGG 0.516381 1.1:-51287386 None:intergenic
GGCAGTAAGGATTTGGACAC+GGG 0.517393 1.1:+51288519 MS.gene89554:CDS
TTGCACTGGAACAGTTTGAC+AGG 0.517685 1.1:-51291403 None:intergenic
GAAAAGGACACAGCACTTGA+AGG 0.519631 1.1:+51287211 MS.gene89554:CDS
TCTATCTCGTATTGGGGCTG+AGG 0.521876 1.1:+51288929 MS.gene89554:CDS
TTGCTAGATTTATCAATCAC+AGG 0.526124 1.1:+51289736 MS.gene89554:CDS
TCACTCTTTGACCTTTCAAG+TGG 0.526254 1.1:-51289131 None:intergenic
AGTTCTACTGGATGCGGAGT+GGG 0.529585 1.1:+51289653 MS.gene89554:CDS
CACATCCGAAGGAAAAGGAT+GGG 0.533153 1.1:+51289503 MS.gene89554:CDS
AATGTGGCAGTAAGTTCTGC+AGG 0.533366 1.1:+51291425 MS.gene89554:CDS
ACTTACTGCCACATTTGCAC+TGG 0.535307 1.1:-51291417 None:intergenic
ATCATCCAAACTGCTCTGAT+GGG 0.536390 1.1:-51288619 None:intergenic
ACCAATTGTCCTGTTCATCT+CGG 0.540540 1.1:-51288655 None:intergenic
GCAAAGATTGTCCACTTGAA+AGG 0.541466 1.1:+51289120 MS.gene89554:CDS
TGCATTCTAACATCACTTTG+TGG 0.547428 1.1:-51288681 None:intergenic
CAGAAGCATCTCGGAACACA+AGG 0.547625 1.1:-51288896 None:intergenic
TTACGTGTGTTATGGTGTGA+TGG 0.548330 1.1:-51288174 None:intergenic
CATTTCTCTATCTCGTATTG+GGG 0.549601 1.1:+51288923 MS.gene89554:CDS
AAACTCTGTCATTGCCTGGA+GGG 0.550126 1.1:-51286694 None:intergenic
ATCCTTACTGCCCACAATGG+CGG 0.550791 1.1:-51288508 None:intergenic
TCACATCCGAAGGAAAAGGA+TGG 0.551509 1.1:+51289502 MS.gene89554:CDS
AGGCGCTATTCAAGGAAGAA+TGG 0.557745 1.1:+51288114 MS.gene89554:CDS
AGCAATTAACGCAGACCTAG+TGG 0.561560 1.1:-51291751 None:intergenic
CCATTAAAGAGTTGCATGAG+AGG 0.561929 1.1:+51289592 MS.gene89554:CDS
TGAGCGGCGTCCCCTTGCAA+TGG 0.562017 1.1:+51287405 MS.gene89554:CDS
GGTATGTAGTTGAAAGGTGG+TGG 0.563966 1.1:-51288867 None:intergenic
GTTATGGTGTGATGGTGTCA+TGG 0.564381 1.1:-51288166 None:intergenic
AAGTGATGTTAGAATGCAGC+CGG 0.565115 1.1:+51288686 MS.gene89554:CDS
TTATACGATCTTCTGTAGAC+TGG 0.565319 1.1:-51288758 None:intergenic
ATATAACCAGGAAGAAGAGA+TGG 0.566148 1.1:+51287069 MS.gene89554:intron
AGAGAATAATCAAATTTCAT+GGG 0.566667 1.1:+51288818 MS.gene89554:CDS
AGTAAAAGCAATGCTGTTGA+GGG 0.566678 1.1:-51289097 None:intergenic
GTGATGGTGTCATGGAGACA+TGG 0.568469 1.1:-51288158 None:intergenic
ACCTTAGAGGAACTGCCAAA+AGG 0.569461 1.1:+51289534 MS.gene89554:CDS
TGTTGGAGCAAATGTGGCTG+TGG 0.569633 1.1:+51289206 MS.gene89554:CDS
GTGCCTGTACATATAAAACT+GGG 0.569930 1.1:+51289000 MS.gene89554:CDS
AAATTTGCATATACAGCTCA+AGG 0.570666 1.1:+51289026 MS.gene89554:CDS
CAGTGTCATCTGATGTGAAT+GGG 0.571710 1.1:+51287263 MS.gene89554:CDS
TCTGCCTTGGTTTCACCTCG+AGG 0.574171 1.1:+51288582 MS.gene89554:CDS
ATCAAGCATAGATGTGTCCA+AGG 0.576306 1.1:+51288464 MS.gene89554:CDS
TAAATCTGAGCCCGTTGATG+AGG 0.579697 1.1:+51287375 MS.gene89554:CDS
TCTGATGGGCTGGTGAAAAG+GGG 0.580258 1.1:-51288605 None:intergenic
CCATAACACACGTAAAGAAG+TGG 0.582122 1.1:+51288182 MS.gene89554:CDS
AAATGTTAACAGAAGCATCT+CGG 0.583016 1.1:-51288905 None:intergenic
GTGGGATTCAACATTTGTGA+AGG 0.586586 1.1:+51289671 MS.gene89554:CDS
CTGAGTGAATTTGGAGACAC+GGG 0.587085 1.1:-51288714 None:intergenic
GTGATAGCCTCTTCAGCTCA+GGG 0.595212 1.1:+51288216 MS.gene89554:CDS
AAATCTAGCAATGTTGCCAA+AGG 0.600969 1.1:-51289724 None:intergenic
GGGCAGTAAGGATTTGGACA+CGG 0.606855 1.1:+51288518 MS.gene89554:CDS
GTCATAACTAGCATCTCGCA+TGG 0.608733 1.1:-51287302 None:intergenic
TTACCCAGTTCTACTGGATG+CGG 0.610406 1.1:+51289647 MS.gene89554:CDS
AGATATATGTGATTGCATGT+TGG 0.610959 1.1:+51288392 MS.gene89554:CDS
TCAAACGATAACTCACAAGA+AGG 0.613211 1.1:+51288429 MS.gene89554:CDS
TCCAAGGAATCTGAGGTTGA+TGG 0.617576 1.1:+51288480 MS.gene89554:CDS
CTTGAAAGGTCAAAGAGTGA+TGG 0.617940 1.1:+51289134 MS.gene89554:CDS
GCAGTGTCATCTGATGTGAA+TGG 0.620539 1.1:+51287262 MS.gene89554:CDS
TCATAACTAGCATCTCGCAT+GGG 0.621862 1.1:-51287301 None:intergenic
AGATGTGTCCAAGGAATCTG+AGG 0.622003 1.1:+51288473 MS.gene89554:CDS
ACATCCGAAGGAAAAGGATG+GGG 0.623345 1.1:+51289504 MS.gene89554:CDS
GGTTGTTTGGAACCATGTAA+AGG 0.624624 1.1:+51289155 MS.gene89554:CDS
CAGTTCTACTGGATGCGGAG+TGG 0.627446 1.1:+51289652 MS.gene89554:CDS
AAACTGTTCCAGTGCAAATG+TGG 0.628078 1.1:+51291409 MS.gene89554:CDS
CAAATCCTTACTGCCCACAA+TGG 0.629154 1.1:-51288511 None:intergenic
GCTGGTGAAAAGGGGCCTCG+AGG 0.629263 1.1:-51288597 None:intergenic
AGTTGTATGTTATTCCACGC+TGG 0.629403 1.1:-51289253 None:intergenic
AAAGAATGTTGGAGCAAATG+TGG 0.629844 1.1:+51289200 MS.gene89554:CDS
GCGAGATGCTAGTTATGACA+GGG 0.630984 1.1:+51287306 MS.gene89554:CDS
ATGCGCTGCTATGTTTCTGG+TGG 0.632146 1.1:-51290974 None:intergenic
TGGGGAAGAAGCTGAGCTAG+GGG 0.632319 1.1:-51287170 None:intergenic
AACGGGCTCAGATTTAGGTA+CGG 0.633960 1.1:-51287368 None:intergenic
TCTTCTGTAGACTGGTGATG+TGG 0.636889 1.1:-51288750 None:intergenic
CAAACTCTGTCATTGCCTGG+AGG 0.639593 1.1:-51286695 None:intergenic
ACTGATTATAAATGGCGCCA+AGG 0.643115 1.1:+51286649 None:intergenic
GTTGTTCTTGAGTAGGCATG+CGG 0.647576 1.1:-51288290 None:intergenic
AGCGCATGAAGAGCTCACTT+GGG 0.648600 1.1:+51290990 MS.gene89554:CDS
AATGGTGTTACTGAAAAGCA+AGG 0.651736 1.1:+51288132 MS.gene89554:CDS
TGTCATCTGATGTGAATGGG+AGG 0.652442 1.1:+51287266 MS.gene89554:CDS
TGATGGTGTCATGGAGACAT+GGG 0.657309 1.1:-51288157 None:intergenic
ACTGAGTGAATTTGGAGACA+CGG 0.658366 1.1:-51288715 None:intergenic
ACTCCGCATCCAGTAGAACT+GGG 0.662392 1.1:-51289650 None:intergenic
GCCTGTACATATAAAACTGG+GGG 0.669381 1.1:+51289002 MS.gene89554:CDS
TAACCAGGAAGAAGAGATGG+AGG 0.670725 1.1:+51287072 MS.gene89554:intron
GTTGGAGCAAATGTGGCTGT+GGG 0.672821 1.1:+51289207 MS.gene89554:CDS
TGCCTGTACATATAAAACTG+GGG 0.672868 1.1:+51289001 MS.gene89554:CDS
ACAACTTCTTAAGATGATGG+AGG 0.672893 1.1:+51288308 MS.gene89554:CDS
TGATGTTAGAATGCAGCCGG+AGG 0.679721 1.1:+51288689 MS.gene89554:CDS
TGTGGCTGTGGGAAACAATG+TGG 0.681976 1.1:+51289218 MS.gene89554:CDS
GTCATCTGATGTGAATGGGA+GGG 0.682522 1.1:+51287267 MS.gene89554:CDS
AAGGACACAGCACTTGAAGG+CGG 0.696062 1.1:+51287214 MS.gene89554:CDS
GGAAATCGCGTTATCCAGCG+TGG 0.696912 1.1:+51289239 MS.gene89554:CDS
GTCAATTCATAAGAAGCATG+CGG 0.698287 1.1:-51287346 None:intergenic
GGGGCCTCGAGGTGAAACCA+AGG 0.711820 1.1:-51288586 None:intergenic
CGAGATGCTAGTTATGACAG+GGG 0.714402 1.1:+51287307 MS.gene89554:CDS
TTGATGAGGAAGATTATGAG+CGG 0.719615 1.1:+51287389 MS.gene89554:CDS
TATGTGAGACTTCTTCAATG+GGG 0.720248 1.1:-51287188 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTAATTTTTAAATTT+AGG + chr1.1:51289473-51289492 MS.gene89554:intron 0.0%
!! AAAAGAGTAAAAATTAAATA+CGG - chr1.1:51291721-51291740 None:intergenic 10.0%
!! AAGAAAAAAAAAAAGATATT+TGG + chr1.1:51290074-51290093 MS.gene89554:intron 10.0%
!! TAAAAATTATGAATCAATAT+TGG - chr1.1:51289331-51289350 None:intergenic 10.0%
!!! CATGTATTTATAATATTTTA+TGG + chr1.1:51290120-51290139 MS.gene89554:intron 10.0%
!! ATAACATTATACTAATACAT+AGG - chr1.1:51289418-51289437 None:intergenic 15.0%
!! ATGTATTATTGTATTATTTG+TGG + chr1.1:51287633-51287652 MS.gene89554:intron 15.0%
!! TGTTGAAAAAGAAAAATAAT+TGG - chr1.1:51287998-51288017 None:intergenic 15.0%
!! TTAAAATAATTGGTATTAAG+TGG - chr1.1:51290382-51290401 None:intergenic 15.0%
!!! AAAACATTTTAAAAATGTAC+CGG - chr1.1:51289444-51289463 None:intergenic 15.0%
!!! AAAATTTTATACAATATAGG+AGG - chr1.1:51291069-51291088 None:intergenic 15.0%
!!! ATAAAATTTTCACTTCTTTA+CGG + chr1.1:51291079-51291098 MS.gene89554:intron 15.0%
!!! GTGAAAATTTTATACAATAT+AGG - chr1.1:51291072-51291091 None:intergenic 15.0%
!! AAAAAAAAAAGATATTTGGC+TGG + chr1.1:51290078-51290097 MS.gene89554:intron 20.0%
!! AAAAAAAAAGATATTTGGCT+GGG + chr1.1:51290079-51290098 MS.gene89554:intron 20.0%
!! AAGAGAATAATCAAATTTCA+TGG + chr1.1:51288817-51288836 MS.gene89554:CDS 20.0%
!! AGAGAATAATCAAATTTCAT+GGG + chr1.1:51288818-51288837 MS.gene89554:CDS 20.0%
!! ATTATTGTATTATTTGTGGA+TGG + chr1.1:51287637-51287656 MS.gene89554:intron 20.0%
!! ATTCCCATCTTTATAAAATT+GGG + chr1.1:51290513-51290532 MS.gene89554:intron 20.0%
!! GAAAGTTTATTAAAGAATGT+TGG + chr1.1:51289189-51289208 MS.gene89554:CDS 20.0%
!! GTTCAAACGATTAAAATAAT+TGG - chr1.1:51290392-51290411 None:intergenic 20.0%
!! TATTCCCATCTTTATAAAAT+TGG + chr1.1:51290512-51290531 MS.gene89554:intron 20.0%
!!! AAACATTTTAAAAATGTACC+GGG - chr1.1:51289443-51289462 None:intergenic 20.0%
!!! AAACCCAATTTTATAAAGAT+GGG - chr1.1:51290519-51290538 None:intergenic 20.0%
!!! ACTTATTTTCTAGTTTTTCA+TGG + chr1.1:51291175-51291194 MS.gene89554:intron 20.0%
!!! AGAAAAATTTCTTTTCTCTT+CGG - chr1.1:51290222-51290241 None:intergenic 20.0%
!!! AGTTTTTATCAAACAACTTA+AGG - chr1.1:51286761-51286780 None:intergenic 20.0%
!!! GTAAGTTTTGTTATGTAATA+TGG + chr1.1:51291012-51291031 MS.gene89554:intron 20.0%
!!! TAAACAGAAGCTTATTTTTA+TGG + chr1.1:51291336-51291355 MS.gene89554:intron 20.0%
!!! TAAACCCAATTTTATAAAGA+TGG - chr1.1:51290520-51290539 None:intergenic 20.0%
!!! TAACATTCATAATTTTCTGT+TGG + chr1.1:51286981-51287000 MS.gene89554:intron 20.0%
!!! TTAAGTTGTTTGATAAAAAC+TGG + chr1.1:51286760-51286779 MS.gene89554:CDS 20.0%
!!! TTTCCTTAGTTTGAATTTTA+GGG - chr1.1:51289797-51289816 None:intergenic 20.0%
!!! TTTTCCTTAGTTTGAATTTT+AGG - chr1.1:51289798-51289817 None:intergenic 20.0%
! AAGAAATGCTTATGTACTTT+GGG + chr1.1:51291208-51291227 MS.gene89554:intron 25.0%
! AAGGATATTTAAACAGTTTG+GGG - chr1.1:51290440-51290459 None:intergenic 25.0%
! ACAATAACTTGAGTTTAATG+TGG + chr1.1:51290149-51290168 MS.gene89554:intron 25.0%
! ACGTTATTAAACAATCCAAA+AGG - chr1.1:51291613-51291632 None:intergenic 25.0%
! AGAAACTCATAAATCAGTAA+AGG - chr1.1:51287900-51287919 None:intergenic 25.0%
! AGTAAACTACAAAAATGAAC+AGG - chr1.1:51291276-51291295 None:intergenic 25.0%
! ATTAGTATAATGTTATTCCC+CGG + chr1.1:51289422-51289441 MS.gene89554:intron 25.0%
! ATTATTACTTATCTCATAGC+TGG + chr1.1:51290577-51290596 MS.gene89554:intron 25.0%
! CAAGGATATTTAAACAGTTT+GGG - chr1.1:51290441-51290460 None:intergenic 25.0%
! CAGTTGGGATAATTTATTTA+TGG + chr1.1:51291148-51291167 MS.gene89554:intron 25.0%
! CCAAAAATTCTTCCTTAATT+AGG - chr1.1:51289052-51289071 None:intergenic 25.0%
! TATACTAATACATAGGAACT+TGG - chr1.1:51289411-51289430 None:intergenic 25.0%
! TCAAGGATATTTAAACAGTT+TGG - chr1.1:51290442-51290461 None:intergenic 25.0%
! TTGAAAAGATTGAGATTAAG+AGG + chr1.1:51287133-51287152 MS.gene89554:CDS 25.0%
! TTTGACATCTTAGTTGTAAT+TGG + chr1.1:51287476-51287495 MS.gene89554:intron 25.0%
!! AAAATGTCTTTGTTTACTAG+TGG - chr1.1:51289306-51289325 None:intergenic 25.0%
!! AATTTTTACTCTTTTGATGC+AGG + chr1.1:51291726-51291745 MS.gene89554:intron 25.0%
!! ATTTACTTTGTTGTATCACT+TGG + chr1.1:51291572-51291591 MS.gene89554:intron 25.0%
!! ATTTTTCCGACAGAAAAATT+TGG - chr1.1:51288366-51288385 None:intergenic 25.0%
!! CCTAATTAAGGAAGAATTTT+TGG + chr1.1:51289049-51289068 MS.gene89554:CDS 25.0%
!! CTTAATCTCAATCTTTTCAA+AGG - chr1.1:51287133-51287152 None:intergenic 25.0%
!! TTATTCTTCTTTTCAAACCA+TGG + chr1.1:51287557-51287576 MS.gene89554:intron 25.0%
!! TTTACTTTGTTGTATCACTT+GGG + chr1.1:51291573-51291592 MS.gene89554:intron 25.0%
!! TTTTTCCGACAGAAAAATTT+GGG - chr1.1:51288365-51288384 None:intergenic 25.0%
!!! AACATTTTAAAAATGTACCG+GGG - chr1.1:51289442-51289461 None:intergenic 25.0%
!!! ATTGTTGGATTTTATTTGAC+AGG + chr1.1:51286918-51286937 MS.gene89554:intron 25.0%
!!! TGAAGGTTTTTTGGTTATTT+AGG + chr1.1:51290728-51290747 MS.gene89554:intron 25.0%
AAAAAATGGAGGACATAGTT+GGG + chr1.1:51289900-51289919 MS.gene89554:intron 30.0%
AAATAATTGGTCAGATTCAG+AGG - chr1.1:51287985-51288004 None:intergenic 30.0%
AAATTTGCATATACAGCTCA+AGG + chr1.1:51289026-51289045 MS.gene89554:CDS 30.0%
AACAAACGATTAACACAGTT+GGG + chr1.1:51291133-51291152 MS.gene89554:intron 30.0%
AACATGAAATGTGCTGAAAA+TGG + chr1.1:51289615-51289634 MS.gene89554:CDS 30.0%
AACATGATGCAATTATGCAA+TGG - chr1.1:51287805-51287824 None:intergenic 30.0%
AACATTTCTCTATCTCGTAT+TGG + chr1.1:51288921-51288940 MS.gene89554:CDS 30.0%
ACAATTGATATCCGGAAAAA+TGG + chr1.1:51289838-51289857 MS.gene89554:intron 30.0%
ACATGAAATGTGCTGAAAAT+GGG + chr1.1:51289616-51289635 MS.gene89554:CDS 30.0%
ACATTTAGCAAAACCATAGT+TGG - chr1.1:51287617-51287636 None:intergenic 30.0%
ACATTTCTCTATCTCGTATT+GGG + chr1.1:51288922-51288941 MS.gene89554:CDS 30.0%
ACTAAGGAAAACAGAGAAAT+AGG + chr1.1:51289807-51289826 MS.gene89554:intron 30.0%
ACTACTAAACTGAGTGAATT+TGG - chr1.1:51288726-51288745 None:intergenic 30.0%
AGAACAACTTCTTAAGATGA+TGG + chr1.1:51288305-51288324 MS.gene89554:CDS 30.0%
AGATATATGTGATTGCATGT+TGG + chr1.1:51288392-51288411 MS.gene89554:CDS 30.0%
AGGACATAACAATTGATATC+CGG + chr1.1:51289830-51289849 MS.gene89554:intron 30.0%
AGGCAGAAAAAGAATTAACT+TGG - chr1.1:51288569-51288588 None:intergenic 30.0%
AGTTTGCATAAGATACTCTA+TGG + chr1.1:51287924-51287943 MS.gene89554:intron 30.0%
ATTTCTCACCTATTGTTTCA+AGG + chr1.1:51289765-51289784 MS.gene89554:intron 30.0%
CAAGAAATGCTTATGTACTT+TGG + chr1.1:51291207-51291226 MS.gene89554:intron 30.0%
CAATTGATATCCGGAAAAAT+GGG + chr1.1:51289839-51289858 MS.gene89554:intron 30.0%
CATATAGTAAGGTTATACTG+AGG + chr1.1:51291243-51291262 MS.gene89554:intron 30.0%
CATTTAGCAAAACCATAGTT+GGG - chr1.1:51287616-51287635 None:intergenic 30.0%
CTCAGTATAACCTTACTATA+TGG - chr1.1:51291245-51291264 None:intergenic 30.0%
TATGATTAAATATTCCTCCC+TGG - chr1.1:51290036-51290055 None:intergenic 30.0%
TGCAAACTTACTTCTATTGT+TGG + chr1.1:51286903-51286922 MS.gene89554:intron 30.0%
TTAAGAAGTTGTTCTTGAGT+AGG - chr1.1:51288300-51288319 None:intergenic 30.0%
TTACATATGAGCATAGTTTG+AGG - chr1.1:51290352-51290371 None:intergenic 30.0%
TTAGTTGTAATTGGCATGTT+TGG + chr1.1:51287485-51287504 MS.gene89554:intron 30.0%
TTATATGAGATTGCCAACAT+AGG + chr1.1:51290001-51290020 MS.gene89554:intron 30.0%
TTGCTAGATTTATCAATCAC+AGG + chr1.1:51289736-51289755 MS.gene89554:CDS 30.0%
TTGGATGCTATATTTGAAGA+AGG + chr1.1:51286816-51286835 MS.gene89554:CDS 30.0%
! AAAAGTGCAACCAAGTAATA+GGG - chr1.1:51289927-51289946 None:intergenic 30.0%
! AGAGAACTATAGAGCTTTAT+TGG + chr1.1:51286797-51286816 MS.gene89554:CDS 30.0%
! AGTTAATTCTTTTTCTGCCT+TGG + chr1.1:51288569-51288588 MS.gene89554:CDS 30.0%
! ATATTTAAACAGTTTGGGGT+AGG - chr1.1:51290436-51290455 None:intergenic 30.0%
! TATTCTCTTCTCCTTTTGTA+AGG - chr1.1:51288806-51288825 None:intergenic 30.0%
! TATTTAAACAGTTTGGGGTA+GGG - chr1.1:51290435-51290454 None:intergenic 30.0%
! TGGATTGATAGTTGTTGAAA+AGG + chr1.1:51291507-51291526 MS.gene89554:intron 30.0%
! TTCTGCATTTTCATATAACC+AGG + chr1.1:51287057-51287076 MS.gene89554:intron 30.0%
! TTGCAAAACATCAAAAGCAT+TGG - chr1.1:51290934-51290953 None:intergenic 30.0%
!! AAATGTTAACAGAAGCATCT+CGG - chr1.1:51288908-51288927 None:intergenic 30.0%
!! TATGTTTCTGGTGGTAAAAA+GGG - chr1.1:51290968-51290987 None:intergenic 30.0%
!! TATTTTTATGGTGTTTCTGC+AGG + chr1.1:51291348-51291367 MS.gene89554:intron 30.0%
!! TTGTTTTTCTTTTGTGGTTC+TGG - chr1.1:51286946-51286965 None:intergenic 30.0%
!!! ACTCTCTTGTTTTTCTTTTG+TGG - chr1.1:51286952-51286971 None:intergenic 30.0%
!!! ATGAAATTTTCTAGCTCACA+TGG + chr1.1:51291041-51291060 MS.gene89554:intron 30.0%
!!! GCAAATGTTTGAAGGTTTTT+TGG + chr1.1:51290719-51290738 MS.gene89554:intron 30.0%
!!! TGAAATTTTCTAGCTCACAT+GGG + chr1.1:51291042-51291061 MS.gene89554:intron 30.0%
AAAATGGGAGAAGACAAAGT+AGG + chr1.1:51289854-51289873 MS.gene89554:intron 35.0%
AAAGAATGTTGGAGCAAATG+TGG + chr1.1:51289200-51289219 MS.gene89554:CDS 35.0%
AAATCTAGCAATGTTGCCAA+AGG - chr1.1:51289727-51289746 None:intergenic 35.0%
AAATGCTTATGTACTTTGGG+TGG + chr1.1:51291211-51291230 MS.gene89554:intron 35.0%
AAGGAAAACAGAGAAATAGG+AGG + chr1.1:51289810-51289829 MS.gene89554:intron 35.0%
AAGGAAGGTAAATCAGATCA+AGG - chr1.1:51290459-51290478 None:intergenic 35.0%
ACATGATAGTAGTAACGATC+TGG - chr1.1:51290828-51290847 None:intergenic 35.0%
AGGACATAACCATTGATATC+CGG + chr1.1:51289877-51289896 MS.gene89554:intron 35.0%
AGTAAAAGCAATGCTGTTGA+GGG - chr1.1:51289100-51289119 None:intergenic 35.0%
AGTCTACAGAAGATCGTATA+AGG + chr1.1:51288760-51288779 MS.gene89554:CDS 35.0%
ATAGTAAGGTTATACTGAGG+AGG + chr1.1:51291246-51291265 MS.gene89554:intron 35.0%
ATAGTTCATTGAATACCAGG+GGG - chr1.1:51287433-51287452 None:intergenic 35.0%
ATATAACCAGGAAGAAGAGA+TGG + chr1.1:51287069-51287088 MS.gene89554:intron 35.0%
ATATGAAGCGATCAAACAGT+AGG + chr1.1:51291449-51291468 MS.gene89554:intron 35.0%
ATGTCAAGTTATGTATCTGC+AGG + chr1.1:51289384-51289403 MS.gene89554:intron 35.0%
CATTTCTCTATCTCGTATTG+GGG + chr1.1:51288923-51288942 MS.gene89554:CDS 35.0%
CCATTGATATCCGGAAAAAA+TGG + chr1.1:51289886-51289905 MS.gene89554:intron 35.0%
CGAAAGAACGAAATTGAAAG+TGG - chr1.1:51288029-51288048 None:intergenic 35.0%
CGAGCAGATTCAACATTTAA+CGG - chr1.1:51287109-51287128 None:intergenic 35.0%
CGGAAATCATGCATCAATAA+TGG - chr1.1:51291701-51291720 None:intergenic 35.0%
CTATGTGAGACTTCTTCAAT+GGG - chr1.1:51287192-51287211 None:intergenic 35.0%
CTCATAATCTTCCTCATCAA+CGG - chr1.1:51287389-51287408 None:intergenic 35.0%
CTGGACACTCAATTTGAATT+GGG - chr1.1:51290809-51290828 None:intergenic 35.0%
CTTATAGCTTATGCTCTGAT+TGG + chr1.1:51291634-51291653 MS.gene89554:intron 35.0%
GAAAAAATGGAGGACATAGT+TGG + chr1.1:51289899-51289918 MS.gene89554:intron 35.0%
GAACAAACGATTAACACAGT+TGG + chr1.1:51291132-51291151 MS.gene89554:intron 35.0%
GAAGAAGTCTCACATAGAAA+AGG + chr1.1:51287195-51287214 MS.gene89554:CDS 35.0%
GATAGATAAACAGTTATGCG+AGG - chr1.1:51290488-51290507 None:intergenic 35.0%
GATAGTTCATTGAATACCAG+GGG - chr1.1:51287434-51287453 None:intergenic 35.0%
GATGTTAGTGACCTTACAAA+AGG + chr1.1:51288792-51288811 MS.gene89554:CDS 35.0%
GCACCCTAAAATTCAAACTA+AGG + chr1.1:51289791-51289810 MS.gene89554:intron 35.0%
GCAGATAGTATAACAACAGA+AGG - chr1.1:51290895-51290914 None:intergenic 35.0%
GCTTGCTTGCATATTGTTTA+TGG - chr1.1:51287878-51287897 None:intergenic 35.0%
GGATAGTTCATTGAATACCA+GGG - chr1.1:51287435-51287454 None:intergenic 35.0%
GTGCCTGTACATATAAAACT+GGG + chr1.1:51289000-51289019 MS.gene89554:CDS 35.0%
TAAAAACTGGCAACTTATCG+AGG + chr1.1:51286773-51286792 MS.gene89554:CDS 35.0%
TATGTGAGACTTCTTCAATG+GGG - chr1.1:51287191-51287210 None:intergenic 35.0%
TCAAACGATAACTCACAAGA+AGG + chr1.1:51288429-51288448 MS.gene89554:CDS 35.0%
TCATAATCTTCCTCATCAAC+GGG - chr1.1:51287388-51287407 None:intergenic 35.0%
TCTATGTGAGACTTCTTCAA+TGG - chr1.1:51287193-51287212 None:intergenic 35.0%
TCTGGACACTCAATTTGAAT+TGG - chr1.1:51290810-51290829 None:intergenic 35.0%
TGAGTTTGAATCACAATCCA+TGG - chr1.1:51287577-51287596 None:intergenic 35.0%
TGCATAAGATACTCTATGGT+AGG + chr1.1:51287928-51287947 MS.gene89554:intron 35.0%
TGCATTCTAACATCACTTTG+TGG - chr1.1:51288684-51288703 None:intergenic 35.0%
TGCCTGTACATATAAAACTG+GGG + chr1.1:51289001-51289020 MS.gene89554:CDS 35.0%
TGGAATAACATACAACTTGC+AGG + chr1.1:51289259-51289278 MS.gene89554:CDS 35.0%
TGTGCCTGTACATATAAAAC+TGG + chr1.1:51288999-51289018 MS.gene89554:CDS 35.0%
TTATACGATCTTCTGTAGAC+TGG - chr1.1:51288761-51288780 None:intergenic 35.0%
TTCCTGAAGCAAAAGTGAAA+CGG + chr1.1:51286721-51286740 MS.gene89554:CDS 35.0%
TTGATATCCGGAAAAAATGG+AGG + chr1.1:51289889-51289908 MS.gene89554:intron 35.0%
TTGATGAGGAAGATTATGAG+CGG + chr1.1:51287389-51287408 MS.gene89554:CDS 35.0%
TTTCAGTTGCATGCTTCTAA+TGG + chr1.1:51290621-51290640 MS.gene89554:intron 35.0%
! AAACAGCTTTTCAGACTTCA+AGG - chr1.1:51290866-51290885 None:intergenic 35.0%
! ACAACTTCTTAAGATGATGG+AGG + chr1.1:51288308-51288327 MS.gene89554:CDS 35.0%
! ATCGACCCAAATTTTTCTGT+CGG + chr1.1:51288357-51288376 MS.gene89554:CDS 35.0%
! CTTTTCAGACTTCAAGGATT+AGG - chr1.1:51290860-51290879 None:intergenic 35.0%
! GAAAAGTGCAACCAAGTAAT+AGG - chr1.1:51289928-51289947 None:intergenic 35.0%
! GTCAATTCATAAGAAGCATG+CGG - chr1.1:51287349-51287368 None:intergenic 35.0%
! TAGGTATTTTTCACATCCGA+AGG + chr1.1:51289492-51289511 MS.gene89554:intron 35.0%
! TTTTTCACATCCGAAGGAAA+AGG + chr1.1:51289498-51289517 MS.gene89554:CDS 35.0%
!! AATGGTGTTACTGAAAAGCA+AGG + chr1.1:51288132-51288151 MS.gene89554:CDS 35.0%
!! CTATGTTTCTGGTGGTAAAA+AGG - chr1.1:51290969-51290988 None:intergenic 35.0%
!! TTTGTCTTCTCCCATTTTTC+CGG - chr1.1:51289852-51289871 None:intergenic 35.0%
!!! ACTATGTCCTCCATTTTTTC+CGG - chr1.1:51289899-51289918 None:intergenic 35.0%
!!! CCATTTTTTCCGGATATCAA+TGG - chr1.1:51289889-51289908 None:intergenic 35.0%
!!! TTTTGGGGTATGTAGTTGAA+AGG - chr1.1:51288876-51288895 None:intergenic 35.0%
AAACCTTCAAACATTTGCCG+AGG - chr1.1:51290717-51290736 None:intergenic 40.0%
AAACTGTTCCAGTGCAAATG+TGG + chr1.1:51291409-51291428 MS.gene89554:CDS 40.0%
AACATAGGAGGACATAACCA+GGG + chr1.1:51290016-51290035 MS.gene89554:intron 40.0%
AAGTGATGTTAGAATGCAGC+CGG + chr1.1:51288686-51288705 MS.gene89554:CDS 40.0%
ACATTTGCCGAGGAACTATT+TGG - chr1.1:51290707-51290726 None:intergenic 40.0%
ACCAATTGTCCTGTTCATCT+CGG - chr1.1:51288658-51288677 None:intergenic 40.0%
ACTGAGTGAATTTGGAGACA+CGG - chr1.1:51288718-51288737 None:intergenic 40.0%
ACTTCTGCCAAATAGTTCCT+CGG + chr1.1:51290697-51290716 MS.gene89554:intron 40.0%
AGTTGTATGTTATTCCACGC+TGG - chr1.1:51289256-51289275 None:intergenic 40.0%
ATAGTTGGGACCCTATTACT+TGG + chr1.1:51289914-51289933 MS.gene89554:intron 40.0%
ATCAAGCATAGATGTGTCCA+AGG + chr1.1:51288464-51288483 MS.gene89554:CDS 40.0%
ATCAATAATGGCGAAAGTGG+TGG - chr1.1:51291689-51291708 None:intergenic 40.0%
ATCATCCAAACTGCTCTGAT+GGG - chr1.1:51288622-51288641 None:intergenic 40.0%
ATCCAATTTGACATGTGTCG+TGG - chr1.1:51291533-51291552 None:intergenic 40.0%
ATCCAGCAAAAGAGTAGAAC+AGG - chr1.1:51291492-51291511 None:intergenic 40.0%
ATCTACTTACCCAGTTCTAC+TGG + chr1.1:51289641-51289660 MS.gene89554:CDS 40.0%
ATGCAGAACCATCAAGCTTA+AGG + chr1.1:51288094-51288113 MS.gene89554:intron 40.0%
CAAGATGCAACTTCCTATAC+AGG - chr1.1:51288964-51288983 None:intergenic 40.0%
CAGACTCATCTAGTGGAAAA+AGG - chr1.1:51290319-51290338 None:intergenic 40.0%
CAGATGTTCTGATGCAAACT+TGG + chr1.1:51290776-51290795 MS.gene89554:intron 40.0%
CAGTAAAAGCAATGCTGTTG+AGG - chr1.1:51289101-51289120 None:intergenic 40.0%
CAGTGTCATCTGATGTGAAT+GGG + chr1.1:51287263-51287282 MS.gene89554:CDS 40.0%
CCACTTCTTTACGTGTGTTA+TGG - chr1.1:51288185-51288204 None:intergenic 40.0%
CCATAACACACGTAAAGAAG+TGG + chr1.1:51288182-51288201 MS.gene89554:CDS 40.0%
CCATTAAAGAGTTGCATGAG+AGG + chr1.1:51289592-51289611 MS.gene89554:CDS 40.0%
CCTCTCATGCAACTCTTTAA+TGG - chr1.1:51289595-51289614 None:intergenic 40.0%
CTCACCTATTGTTTCAAGGT+TGG + chr1.1:51289769-51289788 MS.gene89554:intron 40.0%
CTCTTCAAGTGTCCTTTACA+TGG - chr1.1:51289170-51289189 None:intergenic 40.0%
CTGGGATGTTTCATCAAAGT+TGG + chr1.1:51290097-51290116 MS.gene89554:intron 40.0%
CTTGAAAGGTCAAAGAGTGA+TGG + chr1.1:51289134-51289153 MS.gene89554:CDS 40.0%
GCAAAGATTGTCCACTTGAA+AGG + chr1.1:51289120-51289139 MS.gene89554:CDS 40.0%
GCCTGTACATATAAAACTGG+GGG + chr1.1:51289002-51289021 MS.gene89554:CDS 40.0%
GGATAGCAGACCATATAGTA+AGG + chr1.1:51291232-51291251 MS.gene89554:intron 40.0%
GGGATAGTTCATTGAATACC+AGG - chr1.1:51287436-51287455 None:intergenic 40.0%
GTCAAAGAGTGATGGTTGTT+TGG + chr1.1:51289142-51289161 MS.gene89554:CDS 40.0%
GTGGGATTCAACATTTGTGA+AGG + chr1.1:51289671-51289690 MS.gene89554:CDS 40.0%
TACAGCTCAAGGCCTAATTA+AGG + chr1.1:51289037-51289056 MS.gene89554:CDS 40.0%
TATGAGATTGCCAACATAGG+AGG + chr1.1:51290004-51290023 MS.gene89554:intron 40.0%
TCACTCTTTGACCTTTCAAG+TGG - chr1.1:51289134-51289153 None:intergenic 40.0%
TCATAACTAGCATCTCGCAT+GGG - chr1.1:51287304-51287323 None:intergenic 40.0%
TCCTGAAGCAAAAGTGAAAC+GGG + chr1.1:51286722-51286741 MS.gene89554:CDS 40.0%
TGCATCAATAATGGCGAAAG+TGG - chr1.1:51291692-51291711 None:intergenic 40.0%
TTACGTGTGTTATGGTGTGA+TGG - chr1.1:51288177-51288196 None:intergenic 40.0%
TTGTCAGCTGAAACTGATAG+AGG + chr1.1:51287823-51287842 MS.gene89554:intron 40.0%
! AACATTTAACGGAGCATCCT+CGG - chr1.1:51287098-51287117 None:intergenic 40.0%
! AACCTGTTCTACTCTTTTGC+TGG + chr1.1:51291487-51291506 MS.gene89554:intron 40.0%
! ACTTTGTTGTATCACTTGGG+AGG + chr1.1:51291576-51291595 MS.gene89554:intron 40.0%
! AGAAGCATGCAACTGAAACA+AGG - chr1.1:51290619-51290638 None:intergenic 40.0%
! ATCTCGGAACACAAGGTTTT+GGG - chr1.1:51288892-51288911 None:intergenic 40.0%
! ATGGTGTTTCTGCAGGATTA+TGG + chr1.1:51291355-51291374 MS.gene89554:intron 40.0%
! GAGGCAACTTATTTGCCTTT+TGG + chr1.1:51291595-51291614 MS.gene89554:intron 40.0%
! GGTTGTTTGGAACCATGTAA+AGG + chr1.1:51289155-51289174 MS.gene89554:CDS 40.0%
! TCACACACAAATGCTCCTTT+TGG - chr1.1:51289552-51289571 None:intergenic 40.0%
! TGAAGAAGGCGATGATTTTG+AGG + chr1.1:51286830-51286849 MS.gene89554:CDS 40.0%
!! ACAGTTTGACAGGTTGATCA+TGG - chr1.1:51291396-51291415 None:intergenic 40.0%
!! GGCACTGCTTGTATTTTAGA+AGG + chr1.1:51287949-51287968 MS.gene89554:intron 40.0%
AAACTCTGTCATTGCCTGGA+GGG - chr1.1:51286697-51286716 None:intergenic 45.0%
AATGTGGCAGTAAGTTCTGC+AGG + chr1.1:51291425-51291444 MS.gene89554:CDS 45.0%
ACATCCGAAGGAAAAGGATG+GGG + chr1.1:51289504-51289523 MS.gene89554:CDS 45.0%
ACCTTAGAGGAACTGCCAAA+AGG + chr1.1:51289534-51289553 MS.gene89554:CDS 45.0%
ACGGGTTCTCACTCATCAAA+TGG + chr1.1:51288537-51288556 MS.gene89554:CDS 45.0%
ACTAGGTCTGCGTTAATTGC+TGG + chr1.1:51291753-51291772 MS.gene89554:CDS 45.0%
ACTTACTGCCACATTTGCAC+TGG - chr1.1:51291420-51291439 None:intergenic 45.0%
ACTTATCTCATAGCTGGCAG+CGG + chr1.1:51290583-51290602 MS.gene89554:intron 45.0%
AGATGTGTCCAAGGAATCTG+AGG + chr1.1:51288473-51288492 MS.gene89554:CDS 45.0%
AGCAATTAACGCAGACCTAG+TGG - chr1.1:51291754-51291773 None:intergenic 45.0%
AGGCGCTATTCAAGGAAGAA+TGG + chr1.1:51288114-51288133 MS.gene89554:CDS 45.0%
ATGGGAGAAGACAAAGTAGG+AGG + chr1.1:51289857-51289876 MS.gene89554:intron 45.0%
CAAATCCTTACTGCCCACAA+TGG - chr1.1:51288514-51288533 None:intergenic 45.0%
CAACATAGGAGGACATAACC+AGG + chr1.1:51290015-51290034 MS.gene89554:intron 45.0%
CACATCCGAAGGAAAAGGAT+GGG + chr1.1:51289503-51289522 MS.gene89554:CDS 45.0%
CACTAGATGAGTCTGCAACA+TGG + chr1.1:51290324-51290343 MS.gene89554:intron 45.0%
CAGTTATGCGAGGCAAGTTA+AGG - chr1.1:51290478-51290497 None:intergenic 45.0%
CAGTTTGGATGATGCTGTAC+TGG + chr1.1:51288629-51288648 MS.gene89554:CDS 45.0%
CATCATCCAAACTGCTCTGA+TGG - chr1.1:51288623-51288642 None:intergenic 45.0%
CATGTTGCAGACTCATCTAG+TGG - chr1.1:51290326-51290345 None:intergenic 45.0%
CATTGTGGGCAGTAAGGATT+TGG + chr1.1:51288512-51288531 MS.gene89554:CDS 45.0%
CGAGATGCTAGTTATGACAG+GGG + chr1.1:51287307-51287326 MS.gene89554:CDS 45.0%
CTGAGTGAATTTGGAGACAC+GGG - chr1.1:51288717-51288736 None:intergenic 45.0%
CTGGTTATGTCCTCCTATGT+TGG - chr1.1:51290017-51290036 None:intergenic 45.0%
GAAAAGGACACAGCACTTGA+AGG + chr1.1:51287211-51287230 MS.gene89554:CDS 45.0%
GAATAGCGCCTTAAGCTTGA+TGG - chr1.1:51288105-51288124 None:intergenic 45.0%
GAGGACAGTTGTTCCTGTAT+AGG + chr1.1:51288948-51288967 MS.gene89554:CDS 45.0%
GCAGTGTCATCTGATGTGAA+TGG + chr1.1:51287262-51287281 MS.gene89554:CDS 45.0%
GCATTTGTGTGTGAGTTTGC+TGG + chr1.1:51289558-51289577 MS.gene89554:CDS 45.0%
GCCCAATCCAAAAATAGCAG+CGG + chr1.1:51286671-51286690 MS.gene89554:CDS 45.0%
GCGAGATGCTAGTTATGACA+GGG + chr1.1:51287306-51287325 MS.gene89554:CDS 45.0%
GGTATGTAGTTGAAAGGTGG+TGG - chr1.1:51288870-51288889 None:intergenic 45.0%
GGTGCCAACCTTGAAACAAT+AGG - chr1.1:51289776-51289795 None:intergenic 45.0%
GTCATAACTAGCATCTCGCA+TGG - chr1.1:51287305-51287324 None:intergenic 45.0%
GTCATCTGATGTGAATGGGA+GGG + chr1.1:51287267-51287286 MS.gene89554:CDS 45.0%
GTTCCTCGGCAAATGTTTGA+AGG + chr1.1:51290711-51290730 MS.gene89554:intron 45.0%
GTTGTTCTTGAGTAGGCATG+CGG - chr1.1:51288293-51288312 None:intergenic 45.0%
TAAATCTGAGCCCGTTGATG+AGG + chr1.1:51287375-51287394 MS.gene89554:CDS 45.0%
TAACCAGGAAGAAGAGATGG+AGG + chr1.1:51287072-51287091 MS.gene89554:intron 45.0%
TATGCGAGGCAAGTTAAGGA+AGG - chr1.1:51290474-51290493 None:intergenic 45.0%
TCACATCCGAAGGAAAAGGA+TGG + chr1.1:51289502-51289521 MS.gene89554:CDS 45.0%
TCCAGGCAATGACAGAGTTT+GGG + chr1.1:51286697-51286716 MS.gene89554:CDS 45.0%
TCCGAGATGAACAGGACAAT+TGG + chr1.1:51288654-51288673 MS.gene89554:CDS 45.0%
TGCGAGATGCTAGTTATGAC+AGG + chr1.1:51287305-51287324 MS.gene89554:CDS 45.0%
TGGGGTATGTAGTTGAAAGG+TGG - chr1.1:51288873-51288892 None:intergenic 45.0%
TGTCATCTGATGTGAATGGG+AGG + chr1.1:51287266-51287285 MS.gene89554:CDS 45.0%
TTACCCAGTTCTACTGGATG+CGG + chr1.1:51289647-51289666 MS.gene89554:CDS 45.0%
TTCATGCGCTGCTATGTTTC+TGG - chr1.1:51290980-51290999 None:intergenic 45.0%
TTGCACTGGAACAGTTTGAC+AGG - chr1.1:51291406-51291425 None:intergenic 45.0%
! AACGGGCTCAGATTTAGGTA+CGG - chr1.1:51287371-51287390 None:intergenic 45.0%
! AAGTCCCCATCCTTTTCCTT+CGG - chr1.1:51289511-51289530 None:intergenic 45.0%
! AGTGGTGGTGTCTACATACA+TGG - chr1.1:51291674-51291693 None:intergenic 45.0%
! CAAGCTTAAGGCGCTATTCA+AGG + chr1.1:51288106-51288125 MS.gene89554:CDS 45.0%
! CATCTCGGAACACAAGGTTT+TGG - chr1.1:51288893-51288912 None:intergenic 45.0%
! CTTTTGATGCAGGATCCACT+AGG + chr1.1:51291736-51291755 MS.gene89554:intron 45.0%
! GTTATGGTGTGATGGTGTCA+TGG - chr1.1:51288169-51288188 None:intergenic 45.0%
! TCATCAACGGGCTCAGATTT+AGG - chr1.1:51287376-51287395 None:intergenic 45.0%
! TCCAAGGAATCTGAGGTTGA+TGG + chr1.1:51288480-51288499 MS.gene89554:CDS 45.0%
! TCCTTTTGGCAGTTCCTCTA+AGG - chr1.1:51289538-51289557 None:intergenic 45.0%
! TCTCGGAACACAAGGTTTTG+GGG - chr1.1:51288891-51288910 None:intergenic 45.0%
! TCTTCTGTAGACTGGTGATG+TGG - chr1.1:51288753-51288772 None:intergenic 45.0%
!! GCCCCCAGTTTTATATGTAC+AGG - chr1.1:51289006-51289025 None:intergenic 45.0%
!! TACTGGTTTCCGAGATGAAC+AGG + chr1.1:51288646-51288665 MS.gene89554:CDS 45.0%
!! TGATGGTGTCATGGAGACAT+GGG - chr1.1:51288160-51288179 None:intergenic 45.0%
!!! GCCGCTGCTATTTTTGGATT+GGG - chr1.1:51286675-51286694 None:intergenic 45.0%
!!! GCTATTTTTGGATTGGGCCT+TGG - chr1.1:51286669-51286688 None:intergenic 45.0%
!! AAACAATAAAAATAATATTA+AGG - chr1.1:51287457-51287476 None:intergenic 5.0%
!! AACAATAAAAATAATATTAA+GGG - chr1.1:51287456-51287475 None:intergenic 5.0%
AAGGACACAGCACTTGAAGG+CGG + chr1.1:51287214-51287233 MS.gene89554:CDS 50.0%
AATGGGGAAGAAGCTGAGCT+AGG - chr1.1:51287175-51287194 None:intergenic 50.0%
ACTCCGCATCCAGTAGAACT+GGG - chr1.1:51289653-51289672 None:intergenic 50.0%
AGCGCATGAAGAGCTCACTT+GGG + chr1.1:51290990-51291009 MS.gene89554:CDS 50.0%
AGCTGAAACTGATAGAGGCG+AGG + chr1.1:51287828-51287847 MS.gene89554:intron 50.0%
AGTTCTACTGGATGCGGAGT+GGG + chr1.1:51289653-51289672 MS.gene89554:CDS 50.0%
ATAGGAGGACATAACCAGGG+AGG + chr1.1:51290019-51290038 MS.gene89554:intron 50.0%
ATCCTTACTGCCCACAATGG+CGG - chr1.1:51288511-51288530 None:intergenic 50.0%
ATGGGGAAGAAGCTGAGCTA+GGG - chr1.1:51287174-51287193 None:intergenic 50.0%
ATGGGGACTTCGTACCTTAG+AGG + chr1.1:51289521-51289540 MS.gene89554:CDS 50.0%
CAAACTCTGTCATTGCCTGG+AGG - chr1.1:51286698-51286717 None:intergenic 50.0%
CTCCAGGCAATGACAGAGTT+TGG + chr1.1:51286696-51286715 MS.gene89554:CDS 50.0%
GCCATCAACCTCAGATTCCT+TGG - chr1.1:51288484-51288503 None:intergenic 50.0%
GGCAGTAAGGATTTGGACAC+GGG + chr1.1:51288519-51288538 MS.gene89554:CDS 50.0%
GGCCACGACACATGTCAAAT+TGG + chr1.1:51291528-51291547 MS.gene89554:intron 50.0%
GGGCAGTAAGGATTTGGACA+CGG + chr1.1:51288518-51288537 MS.gene89554:CDS 50.0%
GTGATAGCCTCTTCAGCTCA+GGG + chr1.1:51288216-51288235 MS.gene89554:CDS 50.0%
GTTGGAGCAAATGTGGCTGT+GGG + chr1.1:51289207-51289226 MS.gene89554:CDS 50.0%
TACTTCTCCCTGAGCTGAAG+AGG - chr1.1:51288226-51288245 None:intergenic 50.0%
TCCCAAACTCTGTCATTGCC+TGG - chr1.1:51286701-51286720 None:intergenic 50.0%
TCTATCTCGTATTGGGGCTG+AGG + chr1.1:51288929-51288948 MS.gene89554:CDS 50.0%
TGAGTAGGCATGCGGAAATC+TGG - chr1.1:51288285-51288304 None:intergenic 50.0%
TGATGTTAGAATGCAGCCGG+AGG + chr1.1:51288689-51288708 MS.gene89554:CDS 50.0%
TGCTTAGATGCAGCGTCCTT+TGG + chr1.1:51289708-51289727 MS.gene89554:CDS 50.0%
TGTGATAGCCTCTTCAGCTC+AGG + chr1.1:51288215-51288234 MS.gene89554:CDS 50.0%
TGTGGCTGTGGGAAACAATG+TGG + chr1.1:51289218-51289237 MS.gene89554:CDS 50.0%
TGTTGGAGCAAATGTGGCTG+TGG + chr1.1:51289206-51289225 MS.gene89554:CDS 50.0%
! ATTTTTACCCCTCTCCCCTG+TGG + chr1.1:51286868-51286887 MS.gene89554:intron 50.0%
! GATGACACTGCGTTGTTTCG+AGG - chr1.1:51287253-51287272 None:intergenic 50.0%
! TAAGAAGCATGCGGTGATGC+AGG - chr1.1:51287340-51287359 None:intergenic 50.0%
! TTTGGGGTAGGGAGAGATCA+AGG - chr1.1:51290424-51290443 None:intergenic 50.0%
!! ATGCGCTGCTATGTTTCTGG+TGG - chr1.1:51290977-51290996 None:intergenic 50.0%
!! CAGAAGCATCTCGGAACACA+AGG - chr1.1:51288899-51288918 None:intergenic 50.0%
!! CTCTGATGGGCTGGTGAAAA+GGG - chr1.1:51288609-51288628 None:intergenic 50.0%
!! GCCCGTTTCACTTTTGCTTC+AGG - chr1.1:51286726-51286745 None:intergenic 50.0%
!! GTGATGGTGTCATGGAGACA+TGG - chr1.1:51288161-51288180 None:intergenic 50.0%
!! TCTGATGGGCTGGTGAAAAG+GGG - chr1.1:51288608-51288627 None:intergenic 50.0%
!!! GGCCGCTGCTATTTTTGGAT+TGG - chr1.1:51286676-51286695 None:intergenic 50.0%
AAAAATAGCAGCGGCCCTCC+AGG + chr1.1:51286680-51286699 MS.gene89554:CDS 55.0%
ACCAGCCCATCAGAGCAGTT+TGG + chr1.1:51288614-51288633 MS.gene89554:CDS 55.0%
ACCAGGGGGAACCATTGCAA+GGG - chr1.1:51287419-51287438 None:intergenic 55.0%
AGCTGCAGCTCAGCTCTTCA+GGG + chr1.1:51288258-51288277 MS.gene89554:CDS 55.0%
ATCTCATAGCTGGCAGCGGA+AGG + chr1.1:51290587-51290606 MS.gene89554:intron 55.0%
CACACACACGCACCCAACTA+TGG + chr1.1:51287601-51287620 MS.gene89554:intron 55.0%
CACTCCGCATCCAGTAGAAC+TGG - chr1.1:51289654-51289673 None:intergenic 55.0%
CAGCGCATGAAGAGCTCACT+TGG + chr1.1:51290989-51291008 MS.gene89554:CDS 55.0%
CAGTTCTACTGGATGCGGAG+TGG + chr1.1:51289652-51289671 MS.gene89554:CDS 55.0%
GGAAATCGCGTTATCCAGCG+TGG + chr1.1:51289239-51289258 MS.gene89554:CDS 55.0%
TACCAGGGGGAACCATTGCA+AGG - chr1.1:51287420-51287439 None:intergenic 55.0%
TCCTTACTGCCCACAATGGC+GGG - chr1.1:51288510-51288529 None:intergenic 55.0%
TCTGCCTTGGTTTCACCTCG+AGG + chr1.1:51288582-51288601 MS.gene89554:CDS 55.0%
TGGGGAAGAAGCTGAGCTAG+GGG - chr1.1:51287173-51287192 None:intergenic 55.0%
TTTGGAGACACGGGATCCTC+CGG - chr1.1:51288708-51288727 None:intergenic 55.0%
! TCCAAACTGCTCTGATGGGC+TGG - chr1.1:51288618-51288637 None:intergenic 55.0%
!! GCTCTGATGGGCTGGTGAAA+AGG - chr1.1:51288610-51288629 None:intergenic 55.0%
!!! TGGAGGGCCGCTGCTATTTT+TGG - chr1.1:51286681-51286700 None:intergenic 55.0%
ACCCGCCATTGTGGGCAGTA+AGG + chr1.1:51288506-51288525 MS.gene89554:CDS 60.0%
CCAGGGGGAACCATTGCAAG+GGG - chr1.1:51287418-51287437 None:intergenic 60.0%
CGGCCTCCATCTCTTCTTCC+TGG - chr1.1:51287078-51287097 None:intergenic 60.0%
GAGCTGCAGCTCAGCTCTTC+AGG + chr1.1:51288257-51288276 MS.gene89554:CDS 60.0%
GATGGCACACCCGCCATTGT+GGG + chr1.1:51288498-51288517 MS.gene89554:CDS 60.0%
GGAAGAAGAGATGGAGGCCG+AGG + chr1.1:51287078-51287097 MS.gene89554:intron 60.0%
TGATGGCACACCCGCCATTG+TGG + chr1.1:51288497-51288516 MS.gene89554:CDS 60.0%
CAGTGTGTGCGCAGCCACAG+GGG - chr1.1:51286885-51286904 None:intergenic 65.0%
CCCCTTGCAATGGTTCCCCC+TGG + chr1.1:51287415-51287434 MS.gene89554:CDS 65.0%
GCAGTGTGTGCGCAGCCACA+GGG - chr1.1:51286886-51286905 None:intergenic 65.0%
GCTGGTGAAAAGGGGCCTCG+AGG - chr1.1:51288600-51288619 None:intergenic 65.0%
GGGGCCTCGAGGTGAAACCA+AGG - chr1.1:51288589-51288608 None:intergenic 65.0%
TGAGCGGCGTCCCCTTGCAA+TGG + chr1.1:51287405-51287424 MS.gene89554:CDS 65.0%
TGCAGTGTGTGCGCAGCCAC+AGG - chr1.1:51286887-51286906 None:intergenic 65.0%
GTGCGCAGCCACAGGGGAGA+GGG - chr1.1:51286879-51286898 None:intergenic 70.0%
TGCGCAGCCACAGGGGAGAG+GGG - chr1.1:51286878-51286897 None:intergenic 70.0%
TGTGCGCAGCCACAGGGGAG+AGG - chr1.1:51286880-51286899 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 51286660 51291779 51286660 ID=MS.gene89554
chr1.1 mRNA 51286660 51291779 51286660 ID=MS.gene89554.t1;Parent=MS.gene89554
chr1.1 exon 51286660 51286851 51286660 ID=MS.gene89554.t1.exon1;Parent=MS.gene89554.t1
chr1.1 CDS 51286660 51286851 51286660 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51286940 51286975 51286940 ID=MS.gene89554.t1.exon2;Parent=MS.gene89554.t1
chr1.1 CDS 51286940 51286975 51286940 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51287079 51287436 51287079 ID=MS.gene89554.t1.exon3;Parent=MS.gene89554.t1
chr1.1 CDS 51287079 51287436 51287079 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51288100 51289280 51288100 ID=MS.gene89554.t1.exon4;Parent=MS.gene89554.t1
chr1.1 CDS 51288100 51289280 51288100 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51289495 51289757 51289495 ID=MS.gene89554.t1.exon5;Parent=MS.gene89554.t1
chr1.1 CDS 51289495 51289757 51289495 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51290779 51290845 51290779 ID=MS.gene89554.t1.exon6;Parent=MS.gene89554.t1
chr1.1 CDS 51290779 51290845 51290779 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51290961 51291011 51290961 ID=MS.gene89554.t1.exon7;Parent=MS.gene89554.t1
chr1.1 CDS 51290961 51291011 51290961 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51291370 51291466 51291370 ID=MS.gene89554.t1.exon8;Parent=MS.gene89554.t1
chr1.1 CDS 51291370 51291466 51291370 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
chr1.1 exon 51291748 51291779 51291748 ID=MS.gene89554.t1.exon9;Parent=MS.gene89554.t1
chr1.1 CDS 51291748 51291779 51291748 ID=cds.MS.gene89554.t1;Parent=MS.gene89554.t1
Gene Sequence

>MS.gene89554

ATGGCGCCAAGGCCCAATCCAAAAATAGCAGCGGCCCTCCAGGCAATGACAGAGTTTGGGATTCCTGAAGCAAAAGTGAAACGGGCGCTAAAGAAACTCCTTAAGTTGTTTGATAAAAACTGGCAACTTATCGAGGAAGAGAACTATAGAGCTTTATTGGATGCTATATTTGAAGAAGGCGATGATTTTGAGGTGTTTTTCTCGCTTTATTTTTACCCCTCTCCCCTGTGGCTGCGCACACACTGCAAACTTACTTCTATTGTTGGATTTTATTTGACAGGAGCCAGAACCACAAAAGAAAAACAAGAGAGTGAATGTACGTAACATTCATAATTTTCTGTTGGCAACTTATCTGCATTACTTTATCGATTTTATGTCTATAGCTGCTGAATATGTATTCTGCATTTTCATATAACCAGGAAGAAGAGATGGAGGCCGAGGATGCTCCGTTAAATGTTGAATCTGCTCGACCTTTGAAAAGATTGAGATTAAGAGGACAAGAGAACAATTCCCCTAGCTCAGCTTCTTCCCCATTGAAGAAGTCTCACATAGAAAAGGACACAGCACTTGAAGGCGGCTCTTCACAGCAGCCTCGAAACAACGCAGTGTCATCTGATGTGAATGGGAGGGTTGCAGCACGTCCCATGCGAGATGCTAGTTATGACAGGGGAAAGCAACCTGCATCACCGCATGCTTCTTATGAATTGACCGTACCTAAATCTGAGCCCGTTGATGAGGAAGATTATGAGCGGCGTCCCCTTGCAATGGTTCCCCCTGGTATTCAATGAACTATCCCTTAATATTATTTTTATTGTTTTTGACATCTTAGTTGTAATTGGCATGTTTGGATTATAATTTGCAAACTTTGATTTAATTTATCAGAAAAGTAACTTTGTTTTATTCTTCTTTTCAAACCATGGATTGTGATTCAAACTCATGTTCACACACACGCACCCAACTATGGTTTTGCTAAATGTATTATTGTATTATTTGTGGATGGAACTATGTGATGTATCTGATTGCTAGTACGATAAGATAGATGTATACATCTTACAAAATACAGATACAGAACTTTATTGTCAGAGTACTTGAAAAGAATAAAGTCAATGCACGAATTATTAGTTTAACTGCTTTTGACACTACCATTGCATAATTGCATCATGTTGTCAGCTGAAACTGATAGAGGCGAGGCACATTGATCATATGCACTATTTTCCATAAACAATATGCAAGCAAGCCTTTACTGATTTATGAGTTTCTAGAAAGTTTGCATAAGATACTCTATGGTAGGCACTGCTTGTATTTTAGAAGGCAGAGTTTGACCTCTGAATCTGACCAATTATTTTTCTTTTTCAACATTGTTTTGCCACTTTCAATTTCGTTCTTTCGTTGCATGTTAACATTCATCTTGTAAAGATATATATATTTTTTTAAATGCAGAACCATCAAGCTTAAGGCGCTATTCAAGGAAGAATGGTGTTACTGAAAAGCAAGGTGCCCATGTCTCCATGACACCATCACACCATAACACACGTAAAGAAGTGGTTTCTGATGTTGTGATAGCCTCTTCAGCTCAGGGAGAAGTAAAACTCTCTCTGAGCTGCAGCTCAGCTCTTCAGGGACCAGATTTCCGCATGCCTACTCAAGAACAACTTCTTAAGATGATGGAGGATAAATGTCTGCGATCATATAAAATCATCGACCCAAATTTTTCTGTCGGAAAAATGTTGAGAGATATATGTGATTGCATGTTGGAATTTAGTACTGATTCAAACGATAACTCACAAGAAGGTTCAATGTCAAAATCAAGCATAGATGTGTCCAAGGAATCTGAGGTTGATGGCACACCCGCCATTGTGGGCAGTAAGGATTTGGACACGGGTTCTCACTCATCAAATGGATCAATCCAAGTTAATTCTTTTTCTGCCTTGGTTTCACCTCGAGGCCCCTTTTCACCAGCCCATCAGAGCAGTTTGGATGATGCTGTACTGGTTTCCGAGATGAACAGGACAATTGGTATTCCACAAAGTGATGTTAGAATGCAGCCGGAGGATCCCGTGTCTCCAAATTCACTCAGTTTAGTAGTTGTTCCACATCACCAGTCTACAGAAGATCGTATAAGGTCTTATCATGATGTTAGTGACCTTACAAAAGGAGAAGAGAATAATCAAATTTCATGGGTGAATGAATCATCTACTAACGACTTTCCACCACCTTTCAACTACATACCCCAAAACCTTGTGTTCCGAGATGCTTCTGTTAACATTTCTCTATCTCGTATTGGGGCTGAGGACAGTTGTTCCTGTATAGGAAGTTGCATCTTGTTGTCAGACACACATTGTGCCTGTACATATAAAACTGGGGGCAAATTTGCATATACAGCTCAAGGCCTAATTAAGGAAGAATTTTTGGAAGAGTGTATTGCTATCAGTCACAACCCTCAACAGCATTGCTTTTACTGCAAAGATTGTCCACTTGAAAGGTCAAAGAGTGATGGTTGTTTGGAACCATGTAAAGGACACTTGAAGAGAAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAATGTGGAAATCGCGTTATCCAGCGTGGAATAACATACAACTTGCAGGTGAGTGTTTCAGTAATCTCTGCCACTAGTAAACAAAGACATTTTCTCCAATATTGATTCATAATTTTTATTTAAAAGTTCTTACACGTTGAATTTATTGTTTATGTCAAGTTATGTATCTGCAGGTCCAAGTTCCTATGTATTAGTATAATGTTATTCCCCGGTACATTTTTAAAATGTTTTCTCTAATTAATATTTTAATTTTTAAATTTAGGTATTTTTCACATCCGAAGGAAAAGGATGGGGACTTCGTACCTTAGAGGAACTGCCAAAAGGAGCATTTGTGTGTGAGTTTGCTGGAGAAATTTTAACCATTAAAGAGTTGCATGAGAGGAACATGAAATGTGCTGAAAATGGGAAATCTACTTACCCAGTTCTACTGGATGCGGAGTGGGATTCAACATTTGTGAAGGATGAAGAAGCTCTATGCTTAGATGCAGCGTCCTTTGGCAACATTGCTAGATTTATCAATCACAGGTATTGAATTTCTCACCTATTGTTTCAAGGTTGGCACCCTAAAATTCAAACTAAGGAAAACAGAGAAATAGGAGGACATAACAATTGATATCCGGAAAAATGGGAGAAGACAAAGTAGGAGGACATAACCATTGATATCCGGAAAAAATGGAGGACATAGTTGGGACCCTATTACTTGGTTGCACTTTTCATTGATAATAAGACAGTAATCATTTTTCATAGTTTATACTATTTTTTTTTTTTTTATATGAGATTGCCAACATAGGAGGACATAACCAGGGAGGAATATTTAATCATACAGACTATGCATCTAGAAAAGAAAAAAAAAAAGATATTTGGCTGGGATGTTTCATCAAAGTTGGCATGTATTTATAATATTTTATGGATAAGAACAATAACTTGAGTTTAATGTGGTTGTAGTTCATATTGTTTTAAACACGTGCACTTCTAATTCTAAACATCCGAAGAGAAAAGAAATTTTTCTATGTAATTGTCATGATTGAGAAATAGTTCATTATAAATTAAAATATGTATTACAACGTTGAAAATGAGTCAGAGCCTTTTTCCACTAGATGAGTCTGCAACATGGATCCTCAAACTATGCTCATATGTAACGATAAACCACTTAATACCAATTATTTTAATCGTTTGAACTACACTTTTCCTTGATCTCTCCCTACCCCAAACTGTTTAAATATCCTTGATCTGATTTACCTTCCTTAACTTGCCTCGCATAACTGTTTATCTATCGCAATATTCCCATCTTTATAAAATTGGGTTTACTTTCTTGTATGCTATTTTTATACATTCAACTCAAATATTATTACTTATCTCATAGCTGGCAGCGGAAGGTTCAATCCTTGTTTCAGTTGCATGCTTCTAATGGTTGATTGTGTATTTAGATGATTCAATACTATGACTGTGTTATGTTAACTCTTGACTTCTGCCAAATAGTTCCTCGGCAAATGTTTGAAGGTTTTTTGGTTATTTAGGAGATTTTGTAATAACTTTAATTTTTCAGATGTTCTGATGCAAACTTGGTTGAAATCCCAATTCAAATTGAGTGTCCAGATCGTTACTACTATCATGTGAGAAGCTACCTAATCCTTGAAGTCTGAAAAGCTGTTTTACTTGCCTTCTGTTGTTATACTATCTGCGTAGCAATTTTGCTTACCAATGCTTTTGATGTTTTGCAATTTGCAGTTTGCCCTTTTTACCACCAGAAACATAGCAGCGCATGAAGAGCTCACTTGGGTAAGTTTTGTTATGTAATATGGTTTTTCATGAAATTTTCTAGCTCACATGGGTCCTCCTATATTGTATAAAATTTTCACTTCTTTACGGTGCTTACTAATGACTCTCTTTTTAAGTAGTGAACAAACGATTAACACAGTTGGGATAATTTATTTATGGCTAAACTTATTTTCTAGTTTTTCATGGCTACTTAATCAAGAAATGCTTATGTACTTTGGGTGGATAGCAGACCATATAGTAAGGTTATACTGAGGAGGAGTGCCTGTTCATTTTTGTAGTTTACTTTCTTCAAATCATTTCATTAATCTAGAATCATTTTTTTTCTAAACAGAAGCTTATTTTTATGGTGTTTCTGCAGGATTATGGCATTGACTTTGACGACCATGATCAACCTGTCAAACTGTTCCAGTGCAAATGTGGCAGTAAGTTCTGCAGGAATATGAAGCGATCAAACAGTAGGTTCAATTTCTCAAACAACCTGTTCTACTCTTTTGCTGGATTGATAGTTGTTGAAAAGGCCACGACACATGTCAAATTGGATTTTTTTAGTTTTTAATTTAATTTACTTTGTTGTATCACTTGGGAGGCAACTTATTTGCCTTTTGGATTGTTTAATAACGTGCTTATAGCTTATGCTCTGATTGGTTTCAATTCACACACCATGTATGTAGACACCACCACTTTCGCCATTATTGATGCATGATTTCCGTATTTAATTTTTACTCTTTTGATGCAGGATCCACTAGGTCTGCGTTAATTGCTGGATGA
Protein sequence

>MS.gene89554.t1

MAPRPNPKIAAALQAMTEFGIPEAKVKRALKKLLKLFDKNWQLIEEENYRALLDAIFEEGDDFEEPEPQKKNKRVNEEEMEAEDAPLNVESARPLKRLRLRGQENNSPSSASSPLKKSHIEKDTALEGGSSQQPRNNAVSSDVNGRVAARPMRDASYDRGKQPASPHASYELTVPKSEPVDEEDYERRPLAMVPPEPSSLRRYSRKNGVTEKQGAHVSMTPSHHNTRKEVVSDVVIASSAQGEVKLSLSCSSALQGPDFRMPTQEQLLKMMEDKCLRSYKIIDPNFSVGKMLRDICDCMLEFSTDSNDNSQEGSMSKSSIDVSKESEVDGTPAIVGSKDLDTGSHSSNGSIQVNSFSALVSPRGPFSPAHQSSLDDAVLVSEMNRTIGIPQSDVRMQPEDPVSPNSLSLVVVPHHQSTEDRIRSYHDVSDLTKGEENNQISWVNESSTNDFPPPFNYIPQNLVFRDASVNISLSRIGAEDSCSCIGSCILLSDTHCACTYKTGGKFAYTAQGLIKEEFLEECIAISHNPQQHCFYCKDCPLERSKSDGCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITYNLQVFFTSEGKGWGLRTLEELPKGAFVCEFAGEILTIKELHERNMKCAENGKSTYPVLLDAEWDSTFVKDEEALCLDAASFGNIARFINHRCSDANLVEIPIQIECPDRYYYHFALFTTRNIAAHEELTWDYGIDFDDHDQPVKLFQCKCGSKFCRNMKRSNRSTRSALIAG