Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051693.t1 | XP_003589067.2 | 94.3 | 717 | 41 | 0 | 1 | 717 | 1 | 717 | 0.00E+00 | 1307.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051693.t1 | Q9CB03 | 55.0 | 720 | 293 | 5 | 1 | 716 | 1 | 693 | 1.8e-213 | 743.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051693.t1 | G7ICB7 | 94.3 | 717 | 41 | 0 | 1 | 717 | 1 | 717 | 0.0e+00 | 1307.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051693 | MS.gene38693 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene051693 | MS.gene66459 | 0.856899 | 2.35E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051693 | MS.gene036045 | PPI |
| MS.gene23533 | MS.gene051693 | PPI |
| MS.gene038070 | MS.gene051693 | PPI |
| MS.gene020394 | MS.gene051693 | PPI |
| MS.gene89567 | MS.gene051693 | PPI |
| MS.gene96965 | MS.gene051693 | PPI |
| MS.gene23978 | MS.gene051693 | PPI |
| MS.gene051693 | MS.gene23457 | PPI |
| MS.gene018670 | MS.gene051693 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051693.t1 | MTR_1g018040 | 96.932 | 717 | 22 | 0 | 1 | 717 | 1 | 717 | 0.0 | 1434 |
| MS.gene051693.t1 | MTR_1g069630 | 43.889 | 720 | 382 | 12 | 6 | 716 | 6 | 712 | 0.0 | 536 |
| MS.gene051693.t1 | MTR_7g097230 | 43.370 | 724 | 390 | 9 | 1 | 716 | 16 | 727 | 1.81e-178 | 527 |
| MS.gene051693.t1 | MTR_1g075480 | 42.739 | 723 | 390 | 10 | 3 | 716 | 24 | 731 | 7.63e-173 | 513 |
| MS.gene051693.t1 | MTR_1g075480 | 42.739 | 723 | 390 | 10 | 3 | 716 | 37 | 744 | 1.31e-172 | 513 |
| MS.gene051693.t1 | MTR_1g075480 | 42.562 | 726 | 390 | 11 | 3 | 716 | 37 | 747 | 8.92e-171 | 508 |
| MS.gene051693.t1 | MTR_8g071330 | 39.628 | 699 | 405 | 6 | 20 | 716 | 2 | 685 | 5.84e-167 | 496 |
| MS.gene051693.t1 | MTR_5g026810 | 40.896 | 714 | 394 | 9 | 6 | 716 | 4 | 692 | 5.61e-165 | 491 |
| MS.gene051693.t1 | MTR_1g075480 | 42.258 | 620 | 337 | 8 | 3 | 616 | 24 | 628 | 1.24e-143 | 434 |
| MS.gene051693.t1 | MTR_7g097230 | 44.444 | 549 | 292 | 7 | 1 | 541 | 16 | 559 | 7.65e-131 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051693.t1 | AT1G27460 | 56.944 | 720 | 279 | 5 | 1 | 716 | 1 | 693 | 0.0 | 822 |
| MS.gene051693.t1 | AT1G27460 | 56.806 | 720 | 276 | 5 | 1 | 716 | 1 | 689 | 0.0 | 820 |
| MS.gene051693.t1 | AT1G27460 | 58.909 | 550 | 210 | 3 | 1 | 546 | 1 | 538 | 0.0 | 657 |
| MS.gene051693.t1 | AT2G43040 | 41.761 | 704 | 378 | 9 | 24 | 716 | 18 | 700 | 3.10e-165 | 492 |
| MS.gene051693.t1 | AT2G43040 | 41.761 | 704 | 378 | 9 | 24 | 716 | 18 | 700 | 3.10e-165 | 492 |
| MS.gene051693.t1 | AT4G28600 | 40.192 | 729 | 408 | 13 | 1 | 716 | 25 | 738 | 5.90e-154 | 464 |
| MS.gene051693.t1 | AT4G28600 | 40.192 | 729 | 408 | 13 | 1 | 716 | 25 | 738 | 5.90e-154 | 464 |
| MS.gene051693.t1 | AT4G28600 | 39.891 | 732 | 411 | 14 | 1 | 716 | 25 | 743 | 2.67e-153 | 463 |
Find 143 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAGCATGATTTGGATAT+TGG | 0.161996 | 1.3:-4773351 | None:intergenic |
| GGCATTAACGGAACGGAAAT+TGG | 0.210728 | 1.3:+4774199 | MS.gene051693:intron |
| CTTCAGCTCCTCTAAGGATT+TGG | 0.281062 | 1.3:-4771742 | None:intergenic |
| ACCTGTAATACGCCAACTTC+TGG | 0.283082 | 1.3:-4774327 | None:intergenic |
| CCCAGAAGTTGGCGTATTAC+AGG | 0.285949 | 1.3:+4774326 | MS.gene051693:CDS |
| GCTTAAAGCCAAATCCTTAG+AGG | 0.300513 | 1.3:+4771734 | MS.gene051693:CDS |
| ATCTGCACAGCAGAGGTTTA+AGG | 0.303216 | 1.3:+4773708 | MS.gene051693:CDS |
| AGCTGCCCTACACGTGCTTC+AGG | 0.320041 | 1.3:+4771566 | MS.gene051693:CDS |
| TCTGGTCAAACCATGGAATT+TGG | 0.324195 | 1.3:+4772889 | MS.gene051693:CDS |
| CTAAATGAAGCTGCTCTAAC+TGG | 0.324696 | 1.3:+4773538 | MS.gene051693:CDS |
| AGCAGTAATAAATGCCAAAA+AGG | 0.325256 | 1.3:+4773867 | MS.gene051693:CDS |
| AAGATGTTGTGTGCTTGTTC+TGG | 0.326511 | 1.3:+4770938 | None:intergenic |
| GGAATTAAGATCTGTATAAA+TGG | 0.329348 | 1.3:-4774249 | None:intergenic |
| AAATTCTTGGTGTTTGTTAC+GGG | 0.330909 | 1.3:+4773449 | MS.gene051693:CDS |
| TGGAGCTGCTTCCAAATCTA+TGG | 0.333720 | 1.3:+4772819 | MS.gene051693:CDS |
| GATTGGGATGCTGAAATAAT+TGG | 0.335302 | 1.3:+4773091 | MS.gene051693:CDS |
| TCTTTGAAATTGAACTCTTT+CGG | 0.336725 | 1.3:-4773500 | None:intergenic |
| ATCAGGAAAGATGGAACTTC+AGG | 0.337312 | 1.3:+4773063 | MS.gene051693:CDS |
| GTTCAAGGCCAACAAATTCT+TGG | 0.338655 | 1.3:+4773436 | MS.gene051693:CDS |
| ATGCCTTCATGAGCATGATT+TGG | 0.338766 | 1.3:-4773358 | None:intergenic |
| CTGCTAGTGGGTTATCTTCA+AGG | 0.339248 | 1.3:+4771023 | MS.gene051693:CDS |
| GAATGCATTGACATCAAATT+AGG | 0.345332 | 1.3:-4771684 | None:intergenic |
| ATGAGCATGATTTGGATATT+GGG | 0.348898 | 1.3:-4773350 | None:intergenic |
| CCTGCCTTGATCCATAGATT+TGG | 0.349443 | 1.3:-4772830 | None:intergenic |
| CAAGGTTGAACCAAGCTTCA+TGG | 0.349582 | 1.3:-4774674 | None:intergenic |
| GTATTGCTTCAGCTCCTCTA+AGG | 0.354042 | 1.3:-4771748 | None:intergenic |
| CAAATTCTTGGTGTTTGTTA+CGG | 0.366837 | 1.3:+4773448 | MS.gene051693:CDS |
| TTGATACTTGGAATATAATC+AGG | 0.370501 | 1.3:-4774558 | None:intergenic |
| CAGATCCTACCAGGTATCTT+TGG | 0.380041 | 1.3:+4773175 | MS.gene051693:CDS |
| TAGGTCTCAATAGCTTGCTT+TGG | 0.380503 | 1.3:-4773832 | None:intergenic |
| ATTGAATCAGCTCTTCCTAA+TGG | 0.382528 | 1.3:+4772740 | MS.gene051693:CDS |
| ATGAAGCTGTCACTGCTTAT+CGG | 0.382570 | 1.3:+4772861 | MS.gene051693:CDS |
| AATCACTCAAACTGTTGAAC+TGG | 0.382989 | 1.3:-4774777 | None:intergenic |
| GACTGGGATGTTTGAATCAT+TGG | 0.390614 | 1.3:+4773138 | MS.gene051693:CDS |
| TGGTGAAGAATGTAAGTTGC+AGG | 0.392513 | 1.3:+4772778 | MS.gene051693:CDS |
| TACCACAAGCTTTCCTCAAA+AGG | 0.405664 | 1.3:-4773267 | None:intergenic |
| TAAGGAAGCTAGAGCATTGT+TGG | 0.406121 | 1.3:+4771512 | MS.gene051693:intron |
| TCCCTTGTTGCTAGGGAATC+CGG | 0.406701 | 1.3:-4770995 | None:intergenic |
| CTTTGACCCCAAGGATGATC+AGG | 0.411023 | 1.3:+4771604 | MS.gene051693:CDS |
| TATCTTCAAGGACTGGAGAC+TGG | 0.411122 | 1.3:+4771035 | MS.gene051693:CDS |
| ATGTTACTCATTGATGTTGT+TGG | 0.414395 | 1.3:-4773010 | None:intergenic |
| ATTAATTCTATCAGGAAAGA+TGG | 0.416682 | 1.3:+4773054 | MS.gene051693:CDS |
| CAATAGCCCTGATCATCCTT+GGG | 0.421432 | 1.3:-4771611 | None:intergenic |
| TTAGCTACCACACTGCTCTA+TGG | 0.426482 | 1.3:+4772944 | MS.gene051693:CDS |
| AACAAACACCAAGAATTTGT+TGG | 0.430010 | 1.3:-4773444 | None:intergenic |
| ATACCGTCCGGCATTCCATT+AGG | 0.430679 | 1.3:-4772755 | None:intergenic |
| AAGGAAGCTAGAGCATTGTT+GGG | 0.432906 | 1.3:+4771513 | MS.gene051693:intron |
| TTCGCAGTTGAATTGATACT+TGG | 0.437568 | 1.3:-4774570 | None:intergenic |
| TAATTTGATGTCAATGCATT+CGG | 0.439900 | 1.3:+4771686 | MS.gene051693:CDS |
| AATGGAATGCCGGACGGTAT+TGG | 0.439989 | 1.3:+4772758 | MS.gene051693:CDS |
| TTTAATGAATGCTTTGCGAT+TGG | 0.441748 | 1.3:+4774641 | MS.gene051693:CDS |
| CTCCTTGGCTCCAAATTCCA+TGG | 0.442330 | 1.3:-4772899 | None:intergenic |
| TGTAGACAGGCCAACCTCCT+TGG | 0.444748 | 1.3:-4772914 | None:intergenic |
| GAAGCAGCTCCAATGCTTTG+TGG | 0.446303 | 1.3:-4772808 | None:intergenic |
| CACTGCTTATCGGCGTGCTC+TGG | 0.446793 | 1.3:+4772871 | MS.gene051693:CDS |
| CCTTCTCATTTGCAAGTGAA+TGG | 0.448121 | 1.3:+4772986 | MS.gene051693:CDS |
| TGGAACTTCAGGAAATAGAT+TGG | 0.449360 | 1.3:+4773074 | MS.gene051693:CDS |
| CCTGTAATACGCCAACTTCT+GGG | 0.449510 | 1.3:-4774326 | None:intergenic |
| AATGGAAGCATGGCAAGATA+TGG | 0.451345 | 1.3:+4774223 | MS.gene051693:CDS |
| GCAATAGCCCTGATCATCCT+TGG | 0.454102 | 1.3:-4771612 | None:intergenic |
| GCTCTTTGTTACAGTGCAGC+AGG | 0.459269 | 1.3:+4773223 | MS.gene051693:CDS |
| CATGAAGCTTGGTTCAACCT+TGG | 0.464895 | 1.3:+4774675 | MS.gene051693:CDS |
| GCAAAATTGCCTCAAGAAGC+AGG | 0.465479 | 1.3:-4771713 | None:intergenic |
| AACGGAACGGAAATTGGAAA+TGG | 0.469615 | 1.3:+4774205 | MS.gene051693:CDS |
| GCGAAGTTGTTGATTAAACT+TGG | 0.469791 | 1.3:+4774588 | MS.gene051693:CDS |
| GTATCTTTGGTCGAGCTGAT+AGG | 0.477271 | 1.3:+4773188 | MS.gene051693:CDS |
| TTTGCACCAAACAAATATGA+AGG | 0.477963 | 1.3:-4773319 | None:intergenic |
| AGAGAAATCCCTTGTTGCTA+GGG | 0.478676 | 1.3:-4771002 | None:intergenic |
| CAGAGAAATCCCTTGTTGCT+AGG | 0.478806 | 1.3:-4771003 | None:intergenic |
| AGGTAGCACAGTACCCGCTT+TGG | 0.485220 | 1.3:-4771664 | None:intergenic |
| AACCAAGCTTCATGGTTTGT+CGG | 0.489345 | 1.3:-4774666 | None:intergenic |
| TTCTACCTCATAGTTTAATG+AGG | 0.502115 | 1.3:-4771116 | None:intergenic |
| ATCTTCAAGGACTGGAGACT+GGG | 0.505395 | 1.3:+4771036 | MS.gene051693:CDS |
| GGAACTTCAGGAAATAGATT+GGG | 0.515192 | 1.3:+4773075 | MS.gene051693:CDS |
| AGCTTGGTTCAACCTTGGAT+TGG | 0.519014 | 1.3:+4774680 | MS.gene051693:CDS |
| GAGGTTGGCCTGTCTACAAA+AGG | 0.519839 | 1.3:+4772919 | MS.gene051693:CDS |
| TTCGGTGAGCCTGCTTCTTG+AGG | 0.520356 | 1.3:+4771704 | MS.gene051693:CDS |
| AGCTCTTCCTAATGGAATGC+CGG | 0.522614 | 1.3:+4772748 | MS.gene051693:CDS |
| AACAAATATGAAGGAAAATG+AGG | 0.527041 | 1.3:-4773310 | None:intergenic |
| AGCCGCCTCATTAAACTATG+AGG | 0.527983 | 1.3:+4771111 | MS.gene051693:CDS |
| CGAAGAGGCACCACAGTCAC+CGG | 0.527986 | 1.3:+4770976 | MS.gene051693:CDS |
| GCTGCCCTACACGTGCTTCA+GGG | 0.528614 | 1.3:+4771567 | MS.gene051693:CDS |
| GAGTTTGCTTTAGATGACAC+TGG | 0.530754 | 1.3:+4773748 | MS.gene051693:CDS |
| AACCGACAAACCATGAAGCT+TGG | 0.536001 | 1.3:+4774664 | MS.gene051693:CDS |
| GAATTTGGAGCCAAGGAGGT+TGG | 0.536228 | 1.3:+4772904 | MS.gene051693:CDS |
| AATACCCTGAAGCACGTGTA+GGG | 0.536742 | 1.3:-4771571 | None:intergenic |
| ACAAGGGATTTCTCTGCTAG+TGG | 0.537197 | 1.3:+4771010 | MS.gene051693:CDS |
| AACCATGGAATTTGGAGCCA+AGG | 0.539099 | 1.3:+4772897 | MS.gene051693:CDS |
| AGGAAACCTCGGTCCAAAGC+GGG | 0.539136 | 1.3:+4771651 | MS.gene051693:CDS |
| CAGCTTATCAAAACATAATG+AGG | 0.540674 | 1.3:+4773626 | MS.gene051693:CDS |
| TTATCTATCAGAGGCTGCAA+CGG | 0.540747 | 1.3:+4772694 | MS.gene051693:intron |
| GCTTCCAAATCTATGGATCA+AGG | 0.541459 | 1.3:+4772826 | MS.gene051693:CDS |
| GGAAATGTTCCACAAAGCAT+TGG | 0.544581 | 1.3:+4772799 | MS.gene051693:CDS |
| CACCGGATTCCCTAGCAACA+AGG | 0.550084 | 1.3:+4770993 | MS.gene051693:CDS |
| TGAAGCTCAATCATTATACA+AGG | 0.550824 | 1.3:+4774497 | MS.gene051693:CDS |
| TACTGCTAACAAGGTTCTGT+AGG | 0.552206 | 1.3:-4773851 | None:intergenic |
| TATCCAAATCATGCTCATGA+AGG | 0.553335 | 1.3:+4773355 | MS.gene051693:CDS |
| CCAAATCTATGGATCAAGGC+AGG | 0.554355 | 1.3:+4772830 | MS.gene051693:CDS |
| GGCATTTATTACTGCTAACA+AGG | 0.557549 | 1.3:-4773860 | None:intergenic |
| AGTGGGTTATCTTCAAGGAC+TGG | 0.563107 | 1.3:+4771028 | MS.gene051693:CDS |
| TCACTTGCAAATGAGAAGGT+AGG | 0.565027 | 1.3:-4772982 | None:intergenic |
| CATTCTTCACCAATACCGTC+CGG | 0.570943 | 1.3:-4772767 | None:intergenic |
| TACCTCATAGTTTAATGAGG+CGG | 0.572182 | 1.3:-4771113 | None:intergenic |
| AGTTTGCTTTAGATGACACT+GGG | 0.572182 | 1.3:+4773749 | MS.gene051693:CDS |
| TTGGAAGTTCTACAAGAGGT+TGG | 0.572389 | 1.3:+4773665 | MS.gene051693:CDS |
| CAAGGGATTTCTCTGCTAGT+GGG | 0.573642 | 1.3:+4771011 | MS.gene051693:CDS |
| AAGCTAGAGCATTGTTGGGG+AGG | 0.574341 | 1.3:+4771517 | MS.gene051693:CDS |
| TGTGTAGAGCAGATCCTACC+AGG | 0.574842 | 1.3:+4773166 | MS.gene051693:CDS |
| AATTCTTGGTGTTTGTTACG+GGG | 0.575668 | 1.3:+4773450 | MS.gene051693:CDS |
| GTGGAAGTGATGTTTAGCCT+TGG | 0.592412 | 1.3:+4773571 | MS.gene051693:CDS |
| TTGCTGAGAGAAACAAGCTA+AGG | 0.596133 | 1.3:+4771631 | MS.gene051693:CDS |
| AGGTACTCAGACATGATGGT+TGG | 0.597729 | 1.3:+4773646 | MS.gene051693:CDS |
| ACAGTACCCGCTTTGGACCG+AGG | 0.599977 | 1.3:-4771657 | None:intergenic |
| CCATTCACTTGCAAATGAGA+AGG | 0.606529 | 1.3:-4772986 | None:intergenic |
| AACGGAGTGCAGAACAATTG+TGG | 0.608417 | 1.3:+4772712 | MS.gene051693:CDS |
| GACTTGAAAATGCAATTCAG+AGG | 0.608528 | 1.3:+4773593 | MS.gene051693:CDS |
| AATGAGGTACTCAGACATGA+TGG | 0.610964 | 1.3:+4773642 | MS.gene051693:CDS |
| CTTCCTAATGGAATGCCGGA+CGG | 0.613074 | 1.3:+4772752 | MS.gene051693:CDS |
| GGAAATTGGAAATGGAAGCA+TGG | 0.614368 | 1.3:+4774213 | MS.gene051693:CDS |
| ATGGTTGGAAGTTCTACAAG+AGG | 0.617168 | 1.3:+4773661 | MS.gene051693:CDS |
| AGGAAGCTAGAGCATTGTTG+GGG | 0.619715 | 1.3:+4771514 | MS.gene051693:intron |
| GGCGTGCTCTGGTCAAACCA+TGG | 0.623621 | 1.3:+4772882 | MS.gene051693:CDS |
| TCATAGTATCTGCACAGCAG+AGG | 0.625009 | 1.3:+4773701 | MS.gene051693:CDS |
| GCTACCACACTGCTCTATGG+TGG | 0.625696 | 1.3:+4772947 | MS.gene051693:CDS |
| ACCGGATTCCCTAGCAACAA+GGG | 0.628070 | 1.3:+4770994 | MS.gene051693:CDS |
| CAATACCCTGAAGCACGTGT+AGG | 0.628701 | 1.3:-4771572 | None:intergenic |
| ACATCAGTACTTTGACCCCA+AGG | 0.628904 | 1.3:+4771595 | MS.gene051693:CDS |
| TCAGCTCGACCAAAGATACC+TGG | 0.629775 | 1.3:-4773184 | None:intergenic |
| CATGGAATTTGGAGCCAAGG+AGG | 0.631501 | 1.3:+4772900 | MS.gene051693:CDS |
| TCTTTGGTCGAGCTGATAGG+TGG | 0.642084 | 1.3:+4773191 | MS.gene051693:CDS |
| TGCAGCTAGAACATCTGTAG+TGG | 0.650193 | 1.3:+4773474 | MS.gene051693:CDS |
| GGAGGCTTGAATATCAAAGA+GGG | 0.650810 | 1.3:+4771535 | MS.gene051693:CDS |
| TTTGACCCCAAGGATGATCA+GGG | 0.657698 | 1.3:+4771605 | MS.gene051693:CDS |
| GAAACAAGCTAAGGAAACCT+CGG | 0.659340 | 1.3:+4771640 | MS.gene051693:CDS |
| GGGAGGCTTGAATATCAAAG+AGG | 0.664217 | 1.3:+4771534 | MS.gene051693:CDS |
| GAGGAGCTGAAGCAATACAC+TGG | 0.667577 | 1.3:+4771753 | MS.gene051693:CDS |
| GCTAGGGAATCCGGTGACTG+TGG | 0.672695 | 1.3:-4770986 | None:intergenic |
| AATAGCCCTGATCATCCTTG+GGG | 0.686368 | 1.3:-4771610 | None:intergenic |
| AGAGCAACACAAATTCGAAG+AGG | 0.702161 | 1.3:+4770961 | MS.gene051693:CDS |
| AAGGAAACCTCGGTCCAAAG+CGG | 0.708975 | 1.3:+4771650 | MS.gene051693:CDS |
| CTCGACCAAAGATACCTGGT+AGG | 0.732247 | 1.3:-4773180 | None:intergenic |
| TCTAACTGGAAATAATGACG+TGG | 0.743819 | 1.3:+4773552 | MS.gene051693:CDS |
| AACACCACCATAGAGCAGTG+TGG | 0.767738 | 1.3:-4772951 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTGATTTGTTATTATA+TGG | - | chr1.3:4774438-4774457 | None:intergenic | 15.0% |
| !!! | GAAATTTTTGTTAAAAATTC+AGG | - | chr1.3:4774158-4774177 | None:intergenic | 15.0% |
| !! | AATATGCAATTACATGATTA+TGG | + | chr1.3:4774455-4774474 | MS.gene051693:intron | 20.0% |
| !! | ACAAGATAATGATTATATGA+AGG | - | chr1.3:4771787-4771806 | None:intergenic | 20.0% |
| !! | TATTGCATATAATAATGTAG+AGG | - | chr1.3:4774031-4774050 | None:intergenic | 20.0% |
| !!! | ATGTAGAGGATTATTTTTAA+TGG | - | chr1.3:4774017-4774036 | None:intergenic | 20.0% |
| !!! | CTTTTGTTATTAATTCTATC+AGG | + | chr1.3:4773046-4773065 | MS.gene051693:CDS | 20.0% |
| !!! | TTCTCTGATGTTTATTTTAT+CGG | + | chr1.3:4771344-4771363 | MS.gene051693:intron | 20.0% |
| ! | AAAATGTTGTTAGAGAGTAA+AGG | - | chr1.3:4771151-4771170 | None:intergenic | 25.0% |
| ! | AACAAATATGAAGGAAAATG+AGG | - | chr1.3:4773313-4773332 | None:intergenic | 25.0% |
| ! | AATATGAATTGATGCTAACA+TGG | - | chr1.3:4771918-4771937 | None:intergenic | 25.0% |
| ! | AGAACAAAACTTTCAGTAAT+TGG | - | chr1.3:4772547-4772566 | None:intergenic | 25.0% |
| ! | AGAGAAAAATTCTAGCAATT+GGG | - | chr1.3:4774306-4774325 | None:intergenic | 25.0% |
| ! | AGATAATGATTATATGAAGG+TGG | - | chr1.3:4771784-4771803 | None:intergenic | 25.0% |
| ! | ATAAATAAAGAAACGCGTTA+TGG | - | chr1.3:4771399-4771418 | None:intergenic | 25.0% |
| ! | ATTAATTCTATCAGGAAAGA+TGG | + | chr1.3:4773054-4773073 | MS.gene051693:CDS | 25.0% |
| ! | CAAAACAACAATGTACATTA+TGG | - | chr1.3:4771821-4771840 | None:intergenic | 25.0% |
| ! | CATAATGTAACAGCATTTAT+AGG | - | chr1.3:4772628-4772647 | None:intergenic | 25.0% |
| ! | GCAATAACTTTCATTTATTG+TGG | + | chr1.3:4774045-4774064 | MS.gene051693:intron | 25.0% |
| ! | GGAATTAAGATCTGTATAAA+TGG | - | chr1.3:4774252-4774271 | None:intergenic | 25.0% |
| ! | GTTATTATATGGTAATACCA+AGG | - | chr1.3:4774427-4774446 | None:intergenic | 25.0% |
| ! | TAATTTGATGTCAATGCATT+CGG | + | chr1.3:4771686-4771705 | MS.gene051693:CDS | 25.0% |
| ! | TGATCAAGCAAAAATATTCA+GGG | + | chr1.3:4773921-4773940 | MS.gene051693:CDS | 25.0% |
| ! | TTGATACTTGGAATATAATC+AGG | - | chr1.3:4774561-4774580 | None:intergenic | 25.0% |
| ! | TTGATCAAGCAAAAATATTC+AGG | + | chr1.3:4773920-4773939 | MS.gene051693:CDS | 25.0% |
| !! | CATTTTCCTTCATATTTGTT+TGG | + | chr1.3:4773313-4773332 | MS.gene051693:CDS | 25.0% |
| !!! | ATTGTTGTTTTGTTTGATTG+AGG | + | chr1.3:4771829-4771848 | MS.gene051693:intron | 25.0% |
| !!! | TCTTTGAAATTGAACTCTTT+CGG | - | chr1.3:4773503-4773522 | None:intergenic | 25.0% |
| !!! | TTGTTTCTGCTAATATTAGT+TGG | + | chr1.3:4771423-4771442 | MS.gene051693:intron | 25.0% |
| AAACATCAGAGAAGACATTA+TGG | - | chr1.3:4771337-4771356 | None:intergenic | 30.0% | |
| AACAAACACCAAGAATTTGT+TGG | - | chr1.3:4773447-4773466 | None:intergenic | 30.0% | |
| AATGTGTAGACATATTGATC+AGG | - | chr1.3:4772470-4772489 | None:intergenic | 30.0% | |
| ACATTGTTGCATTGTTTGAT+TGG | + | chr1.3:4772165-4772184 | MS.gene051693:intron | 30.0% | |
| ACTTTCATTTATTGTGGTAC+AGG | + | chr1.3:4774051-4774070 | MS.gene051693:intron | 30.0% | |
| AGCAGTAATAAATGCCAAAA+AGG | + | chr1.3:4773867-4773886 | MS.gene051693:CDS | 30.0% | |
| ATGTGTAGACATATTGATCA+GGG | - | chr1.3:4772469-4772488 | None:intergenic | 30.0% | |
| ATGTTACTCATTGATGTTGT+TGG | - | chr1.3:4773013-4773032 | None:intergenic | 30.0% | |
| ATTAAAAAGCTTCTTGCTAG+TGG | - | chr1.3:4774627-4774646 | None:intergenic | 30.0% | |
| CAATGCAACAATGTAGATTA+TGG | - | chr1.3:4772159-4772178 | None:intergenic | 30.0% | |
| CAGCTTATCAAAACATAATG+AGG | + | chr1.3:4773626-4773645 | MS.gene051693:CDS | 30.0% | |
| CATAATGTAGCAGCATTTAT+AGG | - | chr1.3:4772282-4772301 | None:intergenic | 30.0% | |
| CATAATGTAGTAGCATTTAC+AGG | - | chr1.3:4771949-4771968 | None:intergenic | 30.0% | |
| CATTGTTGCATTGTTTGATT+GGG | + | chr1.3:4772166-4772185 | MS.gene051693:intron | 30.0% | |
| CTGCAAAATATGAAAAGCAA+GGG | - | chr1.3:4774180-4774199 | None:intergenic | 30.0% | |
| GAGAGAAAAATTCTAGCAAT+TGG | - | chr1.3:4774307-4774326 | None:intergenic | 30.0% | |
| GCAATTCATATTGTGTTTGT+GGG | + | chr1.3:4771176-4771195 | MS.gene051693:intron | 30.0% | |
| TAAAACTCAAAACACTGCAA+CGG | - | chr1.3:4772349-4772368 | None:intergenic | 30.0% | |
| TCTCTCTATCACAATTCAAA+AGG | - | chr1.3:4771232-4771251 | None:intergenic | 30.0% | |
| TGAAGCTCAATCATTATACA+AGG | + | chr1.3:4774497-4774516 | MS.gene051693:CDS | 30.0% | |
| TGCAATTCATATTGTGTTTG+TGG | + | chr1.3:4771175-4771194 | MS.gene051693:intron | 30.0% | |
| TTCTACCTCATAGTTTAATG+AGG | - | chr1.3:4771119-4771138 | None:intergenic | 30.0% | |
| TTTAATGAATGCTTTGCGAT+TGG | + | chr1.3:4774641-4774660 | MS.gene051693:CDS | 30.0% | |
| TTTGCACCAAACAAATATGA+AGG | - | chr1.3:4773322-4773341 | None:intergenic | 30.0% | |
| ! | ATGAGCATGATTTGGATATT+GGG | - | chr1.3:4773353-4773372 | None:intergenic | 30.0% |
| ! | GAATGCATTGACATCAAATT+AGG | - | chr1.3:4771687-4771706 | None:intergenic | 30.0% |
| ! | TCATATTTTGCAGGCATTAA+CGG | + | chr1.3:4774187-4774206 | MS.gene051693:intron | 30.0% |
| !! | AAAATGCTCATTTTGATGCT+TGG | - | chr1.3:4773413-4773432 | None:intergenic | 30.0% |
| !! | AAATTCTTGGTGTTTGTTAC+GGG | + | chr1.3:4773449-4773468 | MS.gene051693:CDS | 30.0% |
| !! | CAAATTCTTGGTGTTTGTTA+CGG | + | chr1.3:4773448-4773467 | MS.gene051693:CDS | 30.0% |
| !!! | AATGAGCATTTTTTGGTTCA+AGG | + | chr1.3:4773421-4773440 | MS.gene051693:CDS | 30.0% |
| !!! | GCATCAAAATGAGCATTTTT+TGG | + | chr1.3:4773414-4773433 | MS.gene051693:CDS | 30.0% |
| !!! | TCTGATGTTTATTTTATCGG+TGG | + | chr1.3:4771347-4771366 | MS.gene051693:intron | 30.0% |
| AACACACTTTGATCCTAACA+TGG | - | chr1.3:4772597-4772616 | None:intergenic | 35.0% | |
| ACATGATTATGGCAATGACA+GGG | + | chr1.3:4774466-4774485 | MS.gene051693:intron | 35.0% | |
| AGCAAAAATATTCAGGGATG+AGG | + | chr1.3:4773927-4773946 | MS.gene051693:CDS | 35.0% | |
| ATCAAACAATACCACAACGA+AGG | - | chr1.3:4772501-4772520 | None:intergenic | 35.0% | |
| ATTCATATTGTGTTTGTGGG+TGG | + | chr1.3:4771179-4771198 | MS.gene051693:intron | 35.0% | |
| ATTGAATCAGCTCTTCCTAA+TGG | + | chr1.3:4772740-4772759 | MS.gene051693:CDS | 35.0% | |
| CCTGCAAAATATGAAAAGCA+AGG | - | chr1.3:4774181-4774200 | None:intergenic | 35.0% | |
| CTTGAACAAATCTCCATGTT+AGG | + | chr1.3:4772581-4772600 | MS.gene051693:intron | 35.0% | |
| GAATTGTGATAGAGAGAAGA+TGG | + | chr1.3:4771235-4771254 | MS.gene051693:intron | 35.0% | |
| GACTTGAAAATGCAATTCAG+AGG | + | chr1.3:4773593-4773612 | MS.gene051693:CDS | 35.0% | |
| GATTGGGATGCTGAAATAAT+TGG | + | chr1.3:4773091-4773110 | MS.gene051693:CDS | 35.0% | |
| GGAACTTCAGGAAATAGATT+GGG | + | chr1.3:4773075-4773094 | MS.gene051693:CDS | 35.0% | |
| GGCATTTATTACTGCTAACA+AGG | - | chr1.3:4773863-4773882 | None:intergenic | 35.0% | |
| GTGTAAAAGAGATGATGATC+AGG | - | chr1.3:4772131-4772150 | None:intergenic | 35.0% | |
| TACATGATTATGGCAATGAC+AGG | + | chr1.3:4774465-4774484 | MS.gene051693:intron | 35.0% | |
| TACCTCATAGTTTAATGAGG+CGG | - | chr1.3:4771116-4771135 | None:intergenic | 35.0% | |
| TATCCAAATCATGCTCATGA+AGG | + | chr1.3:4773355-4773374 | MS.gene051693:CDS | 35.0% | |
| TCTAACTGGAAATAATGACG+TGG | + | chr1.3:4773552-4773571 | MS.gene051693:CDS | 35.0% | |
| TGGAACTTCAGGAAATAGAT+TGG | + | chr1.3:4773074-4773093 | MS.gene051693:CDS | 35.0% | |
| TTCGCAGTTGAATTGATACT+TGG | - | chr1.3:4774573-4774592 | None:intergenic | 35.0% | |
| TTGATCAGGGTTTCAAATTG+CGG | - | chr1.3:4772456-4772475 | None:intergenic | 35.0% | |
| ! | AACTAGAGAGAATGCGTTTT+TGG | + | chr1.3:4771263-4771282 | MS.gene051693:intron | 35.0% |
| ! | AATTTTTCTCTCCCAGAAGT+TGG | + | chr1.3:4774315-4774334 | MS.gene051693:CDS | 35.0% |
| ! | ACAAGCTTTTGCATCAAGAA+AGG | - | chr1.3:4774273-4774292 | None:intergenic | 35.0% |
| ! | ACATTTTCGCTTTCAATGAC+TGG | + | chr1.3:4773121-4773140 | MS.gene051693:CDS | 35.0% |
| ! | AGCTAAATCCTTTTGTAGAC+AGG | - | chr1.3:4772930-4772949 | None:intergenic | 35.0% |
| ! | AGTTTGCTTTAGATGACACT+GGG | + | chr1.3:4773749-4773768 | MS.gene051693:CDS | 35.0% |
| ! | ATTTTCCATAACCTTCGTTG+TGG | + | chr1.3:4772487-4772506 | MS.gene051693:intron | 35.0% |
| ! | CATGAGCATGATTTGGATAT+TGG | - | chr1.3:4773354-4773373 | None:intergenic | 35.0% |
| ! | CATTTTCGCTTTCAATGACT+GGG | + | chr1.3:4773122-4773141 | MS.gene051693:CDS | 35.0% |
| ! | GCGAAGTTGTTGATTAAACT+TGG | + | chr1.3:4774588-4774607 | MS.gene051693:CDS | 35.0% |
| ! | TTGAAGCGAAATCTCCTTTT+TGG | - | chr1.3:4773884-4773903 | None:intergenic | 35.0% |
| !! | AATTCTTGGTGTTTGTTACG+GGG | + | chr1.3:4773450-4773469 | MS.gene051693:CDS | 35.0% |
| !! | CCTTGCTTTTCATATTTTGC+AGG | + | chr1.3:4774178-4774197 | MS.gene051693:intron | 35.0% |
| !! | CCTTGGATTGGTTTCAAAAA+TGG | + | chr1.3:4774692-4774711 | MS.gene051693:CDS | 35.0% |
| !! | GGATTGGTTTCAAAAATGGA+GGG | + | chr1.3:4774696-4774715 | MS.gene051693:CDS | 35.0% |
| !! | TGGATTGGTTTCAAAAATGG+AGG | + | chr1.3:4774695-4774714 | MS.gene051693:CDS | 35.0% |
| !!! | CCATTTTTGAAACCAATCCA+AGG | - | chr1.3:4774695-4774714 | None:intergenic | 35.0% |
| !!! | GAATTGCATTTTCAAGTCCA+AGG | - | chr1.3:4773591-4773610 | None:intergenic | 35.0% |
| AACGGAACGGAAATTGGAAA+TGG | + | chr1.3:4774205-4774224 | MS.gene051693:CDS | 40.0% | |
| AAGATGACCAAACAGTGTTC+AGG | - | chr1.3:4774359-4774378 | None:intergenic | 40.0% | |
| AAGATGCAGCTACAATGTTG+CGG | - | chr1.3:4772423-4772442 | None:intergenic | 40.0% | |
| AAGTTGGCGTATTACAGGTA+TGG | + | chr1.3:4774331-4774350 | MS.gene051693:intron | 40.0% | |
| AATCACAGTAGAACCCACAA+AGG | - | chr1.3:4772018-4772037 | None:intergenic | 40.0% | |
| AGAAACGCGTTATGGTATGT+TGG | - | chr1.3:4771391-4771410 | None:intergenic | 40.0% | |
| AGAGAAATCCCTTGTTGCTA+GGG | - | chr1.3:4771005-4771024 | None:intergenic | 40.0% | |
| AGAGCAACACAAATTCGAAG+AGG | + | chr1.3:4770961-4770980 | MS.gene051693:CDS | 40.0% | |
| AGATGCACAGCTGAAACATT+CGG | - | chr1.3:4774398-4774417 | None:intergenic | 40.0% | |
| ATCAGGAAAGATGGAACTTC+AGG | + | chr1.3:4773063-4773082 | MS.gene051693:CDS | 40.0% | |
| ATGAAGCTGTCACTGCTTAT+CGG | + | chr1.3:4772861-4772880 | MS.gene051693:CDS | 40.0% | |
| ATGCCTTCATGAGCATGATT+TGG | - | chr1.3:4773361-4773380 | None:intergenic | 40.0% | |
| ATGGTTGGAAGTTCTACAAG+AGG | + | chr1.3:4773661-4773680 | MS.gene051693:CDS | 40.0% | |
| CAATACCACAACGAAGGTTA+TGG | - | chr1.3:4772495-4772514 | None:intergenic | 40.0% | |
| CATGGAGATTGTTCAAGACT+TGG | - | chr1.3:4771900-4771919 | None:intergenic | 40.0% | |
| CCATTCACTTGCAAATGAGA+AGG | - | chr1.3:4772989-4773008 | None:intergenic | 40.0% | |
| CCTTCTCATTTGCAAGTGAA+TGG | + | chr1.3:4772986-4773005 | MS.gene051693:CDS | 40.0% | |
| CTAAATGAAGCTGCTCTAAC+TGG | + | chr1.3:4773538-4773557 | MS.gene051693:CDS | 40.0% | |
| GAAACAAGCTAAGGAAACCT+CGG | + | chr1.3:4771640-4771659 | MS.gene051693:CDS | 40.0% | |
| GACTGGGATGTTTGAATCAT+TGG | + | chr1.3:4773138-4773157 | MS.gene051693:CDS | 40.0% | |
| GCTTAAAGCCAAATCCTTAG+AGG | + | chr1.3:4771734-4771753 | MS.gene051693:CDS | 40.0% | |
| GCTTCCAAATCTATGGATCA+AGG | + | chr1.3:4772826-4772845 | MS.gene051693:CDS | 40.0% | |
| GGAAATGTTCCACAAAGCAT+TGG | + | chr1.3:4772799-4772818 | MS.gene051693:CDS | 40.0% | |
| GGAAATTGGAAATGGAAGCA+TGG | + | chr1.3:4774213-4774232 | MS.gene051693:CDS | 40.0% | |
| GGAGGCTTGAATATCAAAGA+GGG | + | chr1.3:4771535-4771554 | MS.gene051693:CDS | 40.0% | |
| GGTCATTGCAAACTACTTTG+CGG | + | chr1.3:4772323-4772342 | MS.gene051693:intron | 40.0% | |
| GTTCAAGGCCAACAAATTCT+TGG | + | chr1.3:4773436-4773455 | MS.gene051693:CDS | 40.0% | |
| TACCACAAGCTTTCCTCAAA+AGG | - | chr1.3:4773270-4773289 | None:intergenic | 40.0% | |
| TACTGCTAACAAGGTTCTGT+AGG | - | chr1.3:4773854-4773873 | None:intergenic | 40.0% | |
| TATGGAACCTGAACACTGTT+TGG | + | chr1.3:4774349-4774368 | MS.gene051693:intron | 40.0% | |
| TCACTTGCAAATGAGAAGGT+AGG | - | chr1.3:4772985-4773004 | None:intergenic | 40.0% | |
| TCAGGAGCTGAATCTAAACT+AGG | - | chr1.3:4774140-4774159 | None:intergenic | 40.0% | |
| TCTGGTCAAACCATGGAATT+TGG | + | chr1.3:4772889-4772908 | MS.gene051693:CDS | 40.0% | |
| TGGGTGGCTGAAATTACATT+TGG | + | chr1.3:4771195-4771214 | MS.gene051693:intron | 40.0% | |
| TGGTGAAGAATGTAAGTTGC+AGG | + | chr1.3:4772778-4772797 | MS.gene051693:CDS | 40.0% | |
| TTATCTATCAGAGGCTGCAA+CGG | + | chr1.3:4772694-4772713 | MS.gene051693:intron | 40.0% | |
| TTGCTGAGAGAAACAAGCTA+AGG | + | chr1.3:4771631-4771650 | MS.gene051693:CDS | 40.0% | |
| TTGGAAGTTCTACAAGAGGT+TGG | + | chr1.3:4773665-4773684 | MS.gene051693:CDS | 40.0% | |
| ! | AACCAAGCTTCATGGTTTGT+CGG | - | chr1.3:4774669-4774688 | None:intergenic | 40.0% |
| ! | AATGAGGTACTCAGACATGA+TGG | + | chr1.3:4773642-4773661 | MS.gene051693:CDS | 40.0% |
| ! | AATGGAAGCATGGCAAGATA+TGG | + | chr1.3:4774223-4774242 | MS.gene051693:CDS | 40.0% |
| ! | GAGTTTGCTTTAGATGACAC+TGG | + | chr1.3:4773748-4773767 | MS.gene051693:CDS | 40.0% |
| ! | GCTGCTTTCTTATCTATCAG+AGG | + | chr1.3:4772685-4772704 | MS.gene051693:intron | 40.0% |
| ! | GTTTCAGCTGTGCATCTTTT+TGG | + | chr1.3:4774401-4774420 | MS.gene051693:intron | 40.0% |
| ! | TTTTGCAGGCATTAACGGAA+CGG | + | chr1.3:4774192-4774211 | MS.gene051693:intron | 40.0% |
| !! | AACCTTTTGAGGAAAGCTTG+TGG | + | chr1.3:4773265-4773284 | MS.gene051693:CDS | 40.0% |
| !! | AAGGAAGCTAGAGCATTGTT+GGG | + | chr1.3:4771513-4771532 | MS.gene051693:intron | 40.0% |
| !! | TAAGGAAGCTAGAGCATTGT+TGG | + | chr1.3:4771512-4771531 | MS.gene051693:intron | 40.0% |
| !! | TAGGTCTCAATAGCTTGCTT+TGG | - | chr1.3:4773835-4773854 | None:intergenic | 40.0% |
| !! | TGTGTTTTTGCTGTGTGATG+TGG | + | chr1.3:4771969-4771988 | MS.gene051693:intron | 40.0% |
| AACCGACAAACCATGAAGCT+TGG | + | chr1.3:4774664-4774683 | MS.gene051693:CDS | 45.0% | |
| AACCTCATAATGCCGCAATG+TGG | - | chr1.3:4772390-4772409 | None:intergenic | 45.0% | |
| AACGGAGTGCAGAACAATTG+TGG | + | chr1.3:4772712-4772731 | MS.gene051693:CDS | 45.0% | |
| AATACCCTGAAGCACGTGTA+GGG | - | chr1.3:4771574-4771593 | None:intergenic | 45.0% | |
| AATAGCCCTGATCATCCTTG+GGG | - | chr1.3:4771613-4771632 | None:intergenic | 45.0% | |
| ACAAGGGATTTCTCTGCTAG+TGG | + | chr1.3:4771010-4771029 | MS.gene051693:CDS | 45.0% | |
| ACATCAGTACTTTGACCCCA+AGG | + | chr1.3:4771595-4771614 | MS.gene051693:CDS | 45.0% | |
| ACCTGTAATACGCCAACTTC+TGG | - | chr1.3:4774330-4774349 | None:intergenic | 45.0% | |
| AGCCGCCTCATTAAACTATG+AGG | + | chr1.3:4771111-4771130 | MS.gene051693:CDS | 45.0% | |
| AGCTCTTCCTAATGGAATGC+CGG | + | chr1.3:4772748-4772767 | MS.gene051693:CDS | 45.0% | |
| AGCTTGGTTCAACCTTGGAT+TGG | + | chr1.3:4774680-4774699 | MS.gene051693:CDS | 45.0% | |
| AGGTACTCAGACATGATGGT+TGG | + | chr1.3:4773646-4773665 | MS.gene051693:CDS | 45.0% | |
| ATCTGCACAGCAGAGGTTTA+AGG | + | chr1.3:4773708-4773727 | MS.gene051693:CDS | 45.0% | |
| ATCTTCAAGGACTGGAGACT+GGG | + | chr1.3:4771036-4771055 | MS.gene051693:CDS | 45.0% | |
| ATTGCAGCATGATGCAGTTG+CGG | + | chr1.3:4772053-4772072 | MS.gene051693:intron | 45.0% | |
| CAAGGGATTTCTCTGCTAGT+GGG | + | chr1.3:4771011-4771030 | MS.gene051693:CDS | 45.0% | |
| CAAGGTTGAACCAAGCTTCA+TGG | - | chr1.3:4774677-4774696 | None:intergenic | 45.0% | |
| CAATAGCCCTGATCATCCTT+GGG | - | chr1.3:4771614-4771633 | None:intergenic | 45.0% | |
| CAGAGAAATCCCTTGTTGCT+AGG | - | chr1.3:4771006-4771025 | None:intergenic | 45.0% | |
| CAGATCCTACCAGGTATCTT+TGG | + | chr1.3:4773175-4773194 | MS.gene051693:CDS | 45.0% | |
| CATGAAGCTTGGTTCAACCT+TGG | + | chr1.3:4774675-4774694 | MS.gene051693:CDS | 45.0% | |
| CATTCTTCACCAATACCGTC+CGG | - | chr1.3:4772770-4772789 | None:intergenic | 45.0% | |
| CCAAATCTATGGATCAAGGC+AGG | + | chr1.3:4772830-4772849 | MS.gene051693:CDS | 45.0% | |
| CCTGCCTTGATCCATAGATT+TGG | - | chr1.3:4772833-4772852 | None:intergenic | 45.0% | |
| CCTGTAATACGCCAACTTCT+GGG | - | chr1.3:4774329-4774348 | None:intergenic | 45.0% | |
| GCAAAATTGCCTCAAGAAGC+AGG | - | chr1.3:4771716-4771735 | None:intergenic | 45.0% | |
| GGCATTAACGGAACGGAAAT+TGG | + | chr1.3:4774199-4774218 | MS.gene051693:intron | 45.0% | |
| GGGAGGCTTGAATATCAAAG+AGG | + | chr1.3:4771534-4771553 | MS.gene051693:CDS | 45.0% | |
| GTATCTTTGGTCGAGCTGAT+AGG | + | chr1.3:4773188-4773207 | MS.gene051693:CDS | 45.0% | |
| GTATTGCTTCAGCTCCTCTA+AGG | - | chr1.3:4771751-4771770 | None:intergenic | 45.0% | |
| GTGGAAGTGATGTTTAGCCT+TGG | + | chr1.3:4773571-4773590 | MS.gene051693:CDS | 45.0% | |
| GTGTTTCGGGAGCAATGTTA+TGG | - | chr1.3:4772085-4772104 | None:intergenic | 45.0% | |
| TATCTTCAAGGACTGGAGAC+TGG | + | chr1.3:4771035-4771054 | MS.gene051693:CDS | 45.0% | |
| TCATAGTATCTGCACAGCAG+AGG | + | chr1.3:4773701-4773720 | MS.gene051693:CDS | 45.0% | |
| TGCAGCTAGAACATCTGTAG+TGG | + | chr1.3:4773474-4773493 | MS.gene051693:CDS | 45.0% | |
| TGCTGCAATTGCAGTGTGAT+TGG | - | chr1.3:4772042-4772061 | None:intergenic | 45.0% | |
| TGGAGCTGCTTCCAAATCTA+TGG | + | chr1.3:4772819-4772838 | MS.gene051693:CDS | 45.0% | |
| TGTAGCTGCATCTTGTGACT+CGG | + | chr1.3:4772429-4772448 | MS.gene051693:intron | 45.0% | |
| TTAGCTACCACACTGCTCTA+TGG | + | chr1.3:4772944-4772963 | MS.gene051693:CDS | 45.0% | |
| TTTACAACCGCACCACATTG+CGG | + | chr1.3:4772375-4772394 | MS.gene051693:intron | 45.0% | |
| TTTGACCCCAAGGATGATCA+GGG | + | chr1.3:4771605-4771624 | MS.gene051693:CDS | 45.0% | |
| ! | AACCATGGAATTTGGAGCCA+AGG | + | chr1.3:4772897-4772916 | MS.gene051693:CDS | 45.0% |
| ! | CGTGATCTTGCTGTGTGATA+CGG | + | chr1.3:4772302-4772321 | MS.gene051693:intron | 45.0% |
| ! | CTTCAGCTCCTCTAAGGATT+TGG | - | chr1.3:4771745-4771764 | None:intergenic | 45.0% |
| !! | AAGCAGCGTTGAACCTTTTG+AGG | + | chr1.3:4773254-4773273 | MS.gene051693:CDS | 45.0% |
| !! | AGGAAGCTAGAGCATTGTTG+GGG | + | chr1.3:4771514-4771533 | MS.gene051693:intron | 45.0% |
| !! | AGTGGGTTATCTTCAAGGAC+TGG | + | chr1.3:4771028-4771047 | MS.gene051693:CDS | 45.0% |
| !! | CTGCTAGTGGGTTATCTTCA+AGG | + | chr1.3:4771023-4771042 | MS.gene051693:CDS | 45.0% |
| !!! | GTGCGTGTTCGTTACTTTTG+AGG | + | chr1.3:4773949-4773968 | MS.gene051693:intron | 45.0% |
| !!! | TATTATTATTATGAATTTTA+AGG | + | chr1.3:4771494-4771513 | MS.gene051693:intron | 5.0% |
| AACACCACCATAGAGCAGTG+TGG | - | chr1.3:4772954-4772973 | None:intergenic | 50.0% | |
| AAGGAAACCTCGGTCCAAAG+CGG | + | chr1.3:4771650-4771669 | MS.gene051693:CDS | 50.0% | |
| AATGGAATGCCGGACGGTAT+TGG | + | chr1.3:4772758-4772777 | MS.gene051693:CDS | 50.0% | |
| ACCGGATTCCCTAGCAACAA+GGG | + | chr1.3:4770994-4771013 | MS.gene051693:CDS | 50.0% | |
| ATACCGTCCGGCATTCCATT+AGG | - | chr1.3:4772758-4772777 | None:intergenic | 50.0% | |
| CAATACCCTGAAGCACGTGT+AGG | - | chr1.3:4771575-4771594 | None:intergenic | 50.0% | |
| CACAAAGGCCGCAAAGTAGT+GGG | - | chr1.3:4772003-4772022 | None:intergenic | 50.0% | |
| CACCACATTGCGGCATTATG+AGG | + | chr1.3:4772385-4772404 | MS.gene051693:intron | 50.0% | |
| CACTACTTTGCGGCCTTTGT+GGG | + | chr1.3:4772002-4772021 | MS.gene051693:intron | 50.0% | |
| CAGACCACATCACGTGTTTC+GGG | - | chr1.3:4772098-4772117 | None:intergenic | 50.0% | |
| CATAATGCCGCAATGTGGTG+CGG | - | chr1.3:4772385-4772404 | None:intergenic | 50.0% | |
| CCCAGAAGTTGGCGTATTAC+AGG | + | chr1.3:4774326-4774345 | MS.gene051693:CDS | 50.0% | |
| CTCCTTGGCTCCAAATTCCA+TGG | - | chr1.3:4772902-4772921 | None:intergenic | 50.0% | |
| CTCGACCAAAGATACCTGGT+AGG | - | chr1.3:4773183-4773202 | None:intergenic | 50.0% | |
| CTTCCTAATGGAATGCCGGA+CGG | + | chr1.3:4772752-4772771 | MS.gene051693:CDS | 50.0% | |
| CTTTGACCCCAAGGATGATC+AGG | + | chr1.3:4771604-4771623 | MS.gene051693:CDS | 50.0% | |
| GAAGCAGCTCCAATGCTTTG+TGG | - | chr1.3:4772811-4772830 | None:intergenic | 50.0% | |
| GAGGAGCTGAAGCAATACAC+TGG | + | chr1.3:4771753-4771772 | MS.gene051693:CDS | 50.0% | |
| GCAATAGCCCTGATCATCCT+TGG | - | chr1.3:4771615-4771634 | None:intergenic | 50.0% | |
| GCAGACCACATCACGTGTTT+CGG | - | chr1.3:4772099-4772118 | None:intergenic | 50.0% | |
| GCTCTTTGTTACAGTGCAGC+AGG | + | chr1.3:4773223-4773242 | MS.gene051693:CDS | 50.0% | |
| TCAGCTCGACCAAAGATACC+TGG | - | chr1.3:4773187-4773206 | None:intergenic | 50.0% | |
| TCCCTTGTTGCTAGGGAATC+CGG | - | chr1.3:4770998-4771017 | None:intergenic | 50.0% | |
| TCTTTGGTCGAGCTGATAGG+TGG | + | chr1.3:4773191-4773210 | MS.gene051693:CDS | 50.0% | |
| TGTGTAGAGCAGATCCTACC+AGG | + | chr1.3:4773166-4773185 | MS.gene051693:CDS | 50.0% | |
| ! | CATGGAATTTGGAGCCAAGG+AGG | + | chr1.3:4772900-4772919 | MS.gene051693:CDS | 50.0% |
| ! | GAATTTGGAGCCAAGGAGGT+TGG | + | chr1.3:4772904-4772923 | MS.gene051693:CDS | 50.0% |
| !! | AAGCTAGAGCATTGTTGGGG+AGG | + | chr1.3:4771517-4771536 | MS.gene051693:CDS | 50.0% |
| !! | GAGGTTGGCCTGTCTACAAA+AGG | + | chr1.3:4772919-4772938 | MS.gene051693:CDS | 50.0% |
| !! | GCTGTGCATCTTTTTGGCCT+TGG | + | chr1.3:4774407-4774426 | MS.gene051693:intron | 50.0% |
| AGGAAACCTCGGTCCAAAGC+GGG | + | chr1.3:4771651-4771670 | MS.gene051693:CDS | 55.0% | |
| AGGTAGCACAGTACCCGCTT+TGG | - | chr1.3:4771667-4771686 | None:intergenic | 55.0% | |
| CACCGGATTCCCTAGCAACA+AGG | + | chr1.3:4770993-4771012 | MS.gene051693:CDS | 55.0% | |
| CCACAAAGGCCGCAAAGTAG+TGG | - | chr1.3:4772004-4772023 | None:intergenic | 55.0% | |
| CCACTACTTTGCGGCCTTTG+TGG | + | chr1.3:4772001-4772020 | MS.gene051693:intron | 55.0% | |
| CCGTTGCACCCACTACTTTG+CGG | + | chr1.3:4771992-4772011 | MS.gene051693:intron | 55.0% | |
| GCTACCACACTGCTCTATGG+TGG | + | chr1.3:4772947-4772966 | MS.gene051693:CDS | 55.0% | |
| TGCTCCCGAAACACGTGATG+TGG | + | chr1.3:4772091-4772110 | MS.gene051693:intron | 55.0% | |
| TGTAGACAGGCCAACCTCCT+TGG | - | chr1.3:4772917-4772936 | None:intergenic | 55.0% | |
| TTCGGTGAGCCTGCTTCTTG+AGG | + | chr1.3:4771704-4771723 | MS.gene051693:CDS | 55.0% | |
| !! | CCGCAAAGTAGTGGGTGCAA+CGG | - | chr1.3:4771995-4772014 | None:intergenic | 55.0% |
| AGCTGCCCTACACGTGCTTC+AGG | + | chr1.3:4771566-4771585 | MS.gene051693:CDS | 60.0% | |
| CACTGCTTATCGGCGTGCTC+TGG | + | chr1.3:4772871-4772890 | MS.gene051693:CDS | 60.0% | |
| GCTAGGGAATCCGGTGACTG+TGG | - | chr1.3:4770989-4771008 | None:intergenic | 60.0% | |
| GCTGCCCTACACGTGCTTCA+GGG | + | chr1.3:4771567-4771586 | MS.gene051693:CDS | 60.0% | |
| GGCGTGCTCTGGTCAAACCA+TGG | + | chr1.3:4772882-4772901 | MS.gene051693:CDS | 60.0% | |
| ! | ACAGTACCCGCTTTGGACCG+AGG | - | chr1.3:4771660-4771679 | None:intergenic | 60.0% |
| !! | CGAAGAGGCACCACAGTCAC+CGG | + | chr1.3:4770976-4770995 | MS.gene051693:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 4770941 | 4774797 | 4770941 | ID=MS.gene051693 |
| chr1.3 | mRNA | 4770941 | 4774797 | 4770941 | ID=MS.gene051693.t1;Parent=MS.gene051693 |
| chr1.3 | exon | 4770941 | 4771132 | 4770941 | ID=MS.gene051693.t1.exon1;Parent=MS.gene051693.t1 |
| chr1.3 | CDS | 4770941 | 4771132 | 4770941 | ID=cds.MS.gene051693.t1;Parent=MS.gene051693.t1 |
| chr1.3 | exon | 4771516 | 4771774 | 4771516 | ID=MS.gene051693.t1.exon2;Parent=MS.gene051693.t1 |
| chr1.3 | CDS | 4771516 | 4771774 | 4771516 | ID=cds.MS.gene051693.t1;Parent=MS.gene051693.t1 |
| chr1.3 | exon | 4772705 | 4773948 | 4772705 | ID=MS.gene051693.t1.exon3;Parent=MS.gene051693.t1 |
| chr1.3 | CDS | 4772705 | 4773948 | 4772705 | ID=cds.MS.gene051693.t1;Parent=MS.gene051693.t1 |
| chr1.3 | exon | 4774200 | 4774347 | 4774200 | ID=MS.gene051693.t1.exon4;Parent=MS.gene051693.t1 |
| chr1.3 | CDS | 4774200 | 4774347 | 4774200 | ID=cds.MS.gene051693.t1;Parent=MS.gene051693.t1 |
| chr1.3 | exon | 4774487 | 4774797 | 4774487 | ID=MS.gene051693.t1.exon5;Parent=MS.gene051693.t1 |
| chr1.3 | CDS | 4774487 | 4774797 | 4774487 | ID=cds.MS.gene051693.t1;Parent=MS.gene051693.t1 |
| Gene Sequence |
| Protein sequence |
