Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038380.t1 | XP_003617470.1 | 96.7 | 511 | 16 | 1 | 1 | 511 | 1 | 510 | 7.50E-282 | 979.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038380.t1 | Q9SJH7 | 80.4 | 499 | 95 | 1 | 14 | 509 | 9 | 507 | 2.6e-235 | 815.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038380.t1 | G7K3F1 | 96.7 | 511 | 16 | 1 | 1 | 511 | 1 | 510 | 5.4e-282 | 979.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004536 | MS.gene038380 | PPI |
| MS.gene038380 | MS.gene57427 | PPI |
| MS.gene038380 | MS.gene95617 | PPI |
| MS.gene038380 | MS.gene030781 | PPI |
| MS.gene038380 | MS.gene52387 | PPI |
| MS.gene038380 | MS.gene84175 | PPI |
| MS.gene038380 | MS.gene94677 | PPI |
| MS.gene28100 | MS.gene038380 | PPI |
| MS.gene038380 | MS.gene00278 | PPI |
| MS.gene038380 | MS.gene68895 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038380.t1 | MTR_5g091930 | 96.673 | 511 | 16 | 1 | 1 | 511 | 1 | 510 | 0.0 | 1016 |
| MS.gene038380.t1 | MTR_3g048920 | 84.861 | 502 | 66 | 3 | 15 | 509 | 18 | 516 | 0.0 | 886 |
| MS.gene038380.t1 | MTR_2g061630 | 27.132 | 387 | 238 | 16 | 110 | 469 | 90 | 459 | 2.59e-27 | 115 |
| MS.gene038380.t1 | MTR_2g061630 | 28.099 | 242 | 151 | 9 | 110 | 338 | 90 | 321 | 1.88e-16 | 81.3 |
| MS.gene038380.t1 | MTR_3g051920 | 53.521 | 71 | 31 | 1 | 15 | 83 | 20 | 90 | 3.37e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038380.t1 | AT2G42790 | 80.361 | 499 | 95 | 1 | 14 | 509 | 9 | 507 | 0.0 | 840 |
| MS.gene038380.t1 | AT3G58750 | 79.125 | 503 | 98 | 2 | 14 | 509 | 9 | 511 | 0.0 | 832 |
| MS.gene038380.t1 | AT3G58740 | 69.767 | 473 | 137 | 2 | 14 | 484 | 9 | 477 | 0.0 | 693 |
| MS.gene038380.t1 | AT3G60100 | 28.101 | 395 | 243 | 14 | 110 | 479 | 87 | 465 | 1.89e-31 | 127 |
| MS.gene038380.t1 | AT3G60100 | 28.101 | 395 | 238 | 15 | 110 | 479 | 87 | 460 | 6.74e-30 | 122 |
| MS.gene038380.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 90 | 467 | 2.31e-27 | 115 |
| MS.gene038380.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 90 | 467 | 2.31e-27 | 115 |
| MS.gene038380.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 91 | 468 | 2.59e-27 | 115 |
| MS.gene038380.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 91 | 468 | 2.59e-27 | 115 |
| MS.gene038380.t1 | AT3G60100 | 26.744 | 344 | 218 | 10 | 110 | 431 | 87 | 418 | 1.04e-24 | 106 |
Find 139 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTCTGGATTAATTTAT+AGG | 0.168114 | 5.4:+72968443 | MS.gene038380:CDS |
| AAACGAAAGCTCTCTGGTTT+TGG | 0.240351 | 5.4:+72968147 | MS.gene038380:CDS |
| TTCTCTGCCAACTCCTCAAT+TGG | 0.255628 | 5.4:-72965889 | None:intergenic |
| AAACAAATAGCTCGGATTAT+TGG | 0.264632 | 5.4:+72967116 | MS.gene038380:CDS |
| TTGACACCTTCAATGAATTC+TGG | 0.265146 | 5.4:-72967965 | None:intergenic |
| CCAAATGTTGACTTCTACTC+TGG | 0.293911 | 5.4:+72968430 | MS.gene038380:CDS |
| GCCTCAAAGAGGCGACTTGC+TGG | 0.295298 | 5.4:+72968881 | MS.gene038380:CDS |
| AGCTGTTCCACAAGGAGTTT+TGG | 0.322976 | 5.4:+72966358 | MS.gene038380:CDS |
| GGTCTCATAATCTTTGTATC+AGG | 0.327095 | 5.4:-72968662 | None:intergenic |
| TTGAACTTGGTATTTCTTGC+CGG | 0.342857 | 5.4:-72964876 | None:intergenic |
| ATCGGTGGATTGCTCGTTGC+CGG | 0.352833 | 5.4:-72964771 | None:intergenic |
| GGGGCTGTTGGAGCTCTATA+TGG | 0.363641 | 5.4:+72967736 | MS.gene038380:CDS |
| TAACTAATTGTTGATCTAAC+AGG | 0.366204 | 5.4:-72965826 | None:intergenic |
| TATTCAGGTTGCAGTTGCTT+TGG | 0.367490 | 5.4:+72968360 | MS.gene038380:intron |
| CCATTCAGCTAACTGACTTT+CGG | 0.378642 | 5.4:-72966312 | None:intergenic |
| GAGACTATCCTTTGCTTGAT+TGG | 0.381252 | 5.4:-72968818 | None:intergenic |
| TTTGCTATCCCTCGAATGGC+TGG | 0.387625 | 5.4:+72968605 | MS.gene038380:CDS |
| GCTCTATATGGACCTCTTCA+TGG | 0.390267 | 5.4:+72967748 | MS.gene038380:CDS |
| GGGGAGAAGGTGAGCTGAGA+GGG | 0.395974 | 5.4:-72964747 | None:intergenic |
| CCTCTTTGAGGCATTTGATA+TGG | 0.396914 | 5.4:-72968870 | None:intergenic |
| AAAGACAGAAAGAGCACTTA+TGG | 0.402020 | 5.4:-72966899 | None:intergenic |
| GCCTCATGATGCACATCCTA+TGG | 0.402913 | 5.4:+72966861 | MS.gene038380:CDS |
| GTCACATTGGAGGGAGTCAT+TGG | 0.403515 | 5.4:+72968634 | MS.gene038380:CDS |
| CCAGAGTAGAAGTCAACATT+TGG | 0.408985 | 5.4:-72968430 | None:intergenic |
| GCACGAGTTAGCTGAGGATT+GGG | 0.430827 | 5.4:-72967533 | None:intergenic |
| TCCAGCAAGTCGCCTCTTTG+AGG | 0.436012 | 5.4:-72968882 | None:intergenic |
| TCCAGGAAACGAAAGCTCTC+TGG | 0.445819 | 5.4:+72968141 | MS.gene038380:intron |
| TCATTTCATGTTCTGCGTGC+AGG | 0.447909 | 5.4:-72967574 | None:intergenic |
| ACCATTGTTGATGAGAGAAC+CGG | 0.450167 | 5.4:+72964857 | MS.gene038380:CDS |
| TGCACGAGTTAGCTGAGGAT+TGG | 0.451312 | 5.4:-72967534 | None:intergenic |
| GATGTATATACAGCTATTGC+CGG | 0.452156 | 5.4:+72967715 | MS.gene038380:CDS |
| AGTTATATTGACGGTGATGA+AGG | 0.455264 | 5.4:+72965844 | MS.gene038380:CDS |
| TCTCTGCCAACTCCTCAATT+GGG | 0.457866 | 5.4:-72965888 | None:intergenic |
| TCTCTCATCAACAATGGTTA+AGG | 0.458283 | 5.4:-72964852 | None:intergenic |
| GTGGCTTTGACAGTGCCATC+TGG | 0.460578 | 5.4:-72964905 | None:intergenic |
| TGGATAAACACCTCAATAAG+AGG | 0.464282 | 5.4:-72968255 | None:intergenic |
| AGTTCTCTGTGTAAGATAGT+TGG | 0.468730 | 5.4:-72967365 | None:intergenic |
| AAAGATTATGAGACCTCAAC+AGG | 0.469186 | 5.4:+72968670 | MS.gene038380:CDS |
| AACATTCCAGAATTCATTGA+AGG | 0.471243 | 5.4:+72967959 | MS.gene038380:CDS |
| TGCTGCAGTTTATCTTAGAA+TGG | 0.476134 | 5.4:+72967314 | MS.gene038380:CDS |
| TTTATATCGGAGAATGGTTA+CGG | 0.476536 | 5.4:+72968786 | MS.gene038380:CDS |
| TCTTTACTTACTTGGAGAGC+AGG | 0.477199 | 5.4:-72966937 | None:intergenic |
| TTTAGGTTTATATCGGAGAA+TGG | 0.479397 | 5.4:+72968780 | MS.gene038380:intron |
| AGGCTACCCAATTGAGGAGT+TGG | 0.480404 | 5.4:+72965882 | MS.gene038380:CDS |
| TGGCCGGGATCCTCTTATTG+AGG | 0.483981 | 5.4:+72968245 | MS.gene038380:CDS |
| TCAACAATTAGTTATATTGA+CGG | 0.485200 | 5.4:+72965835 | MS.gene038380:CDS |
| GCAGTTTATCTTAGAATGGC+AGG | 0.489562 | 5.4:+72967318 | MS.gene038380:CDS |
| AATTTATGCAATCAGGGCCA+TGG | 0.489692 | 5.4:+72968553 | MS.gene038380:intron |
| GTCTATCTGCAGATATCGAC+TGG | 0.491411 | 5.4:+72965751 | MS.gene038380:intron |
| ACAGCTATTGCCGGGGCTGT+TGG | 0.492107 | 5.4:+72967724 | MS.gene038380:CDS |
| GTTATCTTGTTTCAGTGGTG+TGG | 0.492804 | 5.4:+72967693 | MS.gene038380:intron |
| TGGAGAGCAGGATTTGCATC+GGG | 0.502431 | 5.4:-72966925 | None:intergenic |
| CCGAAAGTCAGTTAGCTGAA+TGG | 0.505009 | 5.4:+72966312 | MS.gene038380:CDS |
| TTTATTTGCTATCCCTCGAA+TGG | 0.506179 | 5.4:+72968601 | MS.gene038380:CDS |
| GGACTCAAGTTATATGATCC+TGG | 0.509144 | 5.4:+72965787 | MS.gene038380:CDS |
| GAGGATTGGGTTTATATGAC+CGG | 0.510515 | 5.4:-72967520 | None:intergenic |
| CTAAGACAGGGTGAAGGATG+AGG | 0.511504 | 5.4:-72964799 | None:intergenic |
| ATGTATATACAGCTATTGCC+GGG | 0.514441 | 5.4:+72967716 | MS.gene038380:CDS |
| TGGGTACTTGTCACATTGGA+GGG | 0.518636 | 5.4:+72968625 | MS.gene038380:CDS |
| GCTCGTTGCCGGAGGGGAGA+AGG | 0.519774 | 5.4:-72964760 | None:intergenic |
| AGCGGTGATTGAGCTAAGAC+AGG | 0.520836 | 5.4:-72964812 | None:intergenic |
| AGAGGCGACTTGCTGGATCT+AGG | 0.523128 | 5.4:+72968888 | MS.gene038380:CDS |
| GGTTGCAGTTGCTTTGGAGA+AGG | 0.523130 | 5.4:+72968366 | MS.gene038380:intron |
| TCAAGTGATGCTGACAAGCT+TGG | 0.523901 | 5.4:+72968839 | MS.gene038380:CDS |
| AAATAAAACTGTGAAATACT+CGG | 0.523937 | 5.4:-72968585 | None:intergenic |
| TCACCGCTGGCCAACCTCAA+TGG | 0.527786 | 5.4:+72964827 | MS.gene038380:CDS |
| CTGTCCGACACCTTGCATCA+AGG | 0.529086 | 5.4:+72967612 | MS.gene038380:CDS |
| GGTTAAGGTGCCATTGAGGT+TGG | 0.530030 | 5.4:-72964837 | None:intergenic |
| ATTTATGCAATCAGGGCCAT+GGG | 0.530068 | 5.4:+72968554 | MS.gene038380:intron |
| GACAAGTACCCAGCCATTCG+AGG | 0.530448 | 5.4:-72968614 | None:intergenic |
| AGTTGGTTGGATGGAAGCAC+AGG | 0.531460 | 5.4:-72967348 | None:intergenic |
| TTGCTATCCCTCGAATGGCT+GGG | 0.532404 | 5.4:+72968606 | MS.gene038380:CDS |
| CTGGGTACTTGTCACATTGG+AGG | 0.537752 | 5.4:+72968624 | MS.gene038380:CDS |
| AAGAGGATCCCGGCCAACAA+TGG | 0.538019 | 5.4:-72968238 | None:intergenic |
| TCTTCATGGTGGAGCTAATG+AGG | 0.538932 | 5.4:+72967762 | MS.gene038380:CDS |
| TCAGCTCACCTTCTCCCCTC+CGG | 0.539100 | 5.4:+72964752 | MS.gene038380:CDS |
| CGAGCAAGGGAGAGTACCGC+TGG | 0.539940 | 5.4:-72964716 | None:intergenic |
| CATCTGGAGAAACTTGAACT+TGG | 0.541125 | 5.4:-72964889 | None:intergenic |
| GTGGATTGCTCGTTGCCGGA+GGG | 0.544049 | 5.4:-72964767 | None:intergenic |
| TTCAGCTAACTGACTTTCGG+TGG | 0.548613 | 5.4:-72966309 | None:intergenic |
| GGAGCTGTGTTTAAATAGCC+AGG | 0.548764 | 5.4:-72965805 | None:intergenic |
| TTGGAGAGCAGGATTTGCAT+CGG | 0.551066 | 5.4:-72966926 | None:intergenic |
| TGCGTGCTTTAAGAGGCAAC+CGG | 0.552005 | 5.4:+72967501 | MS.gene038380:intron |
| AGAAAGGAAATTACCTGTTG+AGG | 0.556422 | 5.4:-72968683 | None:intergenic |
| CAAGTTCAAGTTTCTCCAGA+TGG | 0.556908 | 5.4:+72964890 | MS.gene038380:CDS |
| CTGATGAATATTTCATCAAG+AGG | 0.557760 | 5.4:+72968398 | MS.gene038380:CDS |
| GAGAAGGTGAGCTGAGAGGG+TGG | 0.559936 | 5.4:-72964744 | None:intergenic |
| AAACTCACCAAAACTCCTTG+TGG | 0.560805 | 5.4:-72966365 | None:intergenic |
| GTGAAGGATGAGGAGGTGAT+CGG | 0.562348 | 5.4:-72964789 | None:intergenic |
| CAATGGTTAAGGTGCCATTG+AGG | 0.564315 | 5.4:-72964841 | None:intergenic |
| AATAAAACTGTGAAATACTC+GGG | 0.568227 | 5.4:-72968584 | None:intergenic |
| GGTGGATTGCTCGTTGCCGG+AGG | 0.568739 | 5.4:-72964768 | None:intergenic |
| GTTATATTGACGGTGATGAA+GGG | 0.570128 | 5.4:+72965845 | MS.gene038380:CDS |
| AATAGCTCGGATTATTGGAA+AGG | 0.575815 | 5.4:+72967121 | MS.gene038380:CDS |
| TCTTGATATTTACAACTCAA+AGG | 0.578497 | 5.4:+72967082 | MS.gene038380:CDS |
| ATATAGAGCTCCAACAGCCC+CGG | 0.578865 | 5.4:-72967734 | None:intergenic |
| AGAGGGTGGCTAAACGAGCA+AGG | 0.581190 | 5.4:-72964730 | None:intergenic |
| AAACTATGATCCCAGGGCAA+AGG | 0.582529 | 5.4:+72968185 | MS.gene038380:CDS |
| TGAGAGACAAACAAATAGCT+CGG | 0.583417 | 5.4:+72967108 | MS.gene038380:CDS |
| TGTCTTAGCTCAATCACCGC+TGG | 0.583685 | 5.4:+72964814 | MS.gene038380:CDS |
| GTGTAAGATAGTTGGTTGGA+TGG | 0.587213 | 5.4:-72967357 | None:intergenic |
| AAGGATGAGGAGGTGATCGG+TGG | 0.587249 | 5.4:-72964786 | None:intergenic |
| ATACAGAGGCTACCCAATTG+AGG | 0.592671 | 5.4:+72965876 | MS.gene038380:CDS |
| AAAATGAATACCTTGATGCA+AGG | 0.592875 | 5.4:-72967622 | None:intergenic |
| CAAAGCCACTGATCTCAAGA+AGG | 0.599526 | 5.4:+72964919 | MS.gene038380:CDS |
| AGGGGAGAAGGTGAGCTGAG+AGG | 0.600766 | 5.4:-72964748 | None:intergenic |
| CAGCATTCAGCTGTTCCACA+AGG | 0.604429 | 5.4:+72966350 | MS.gene038380:CDS |
| ACACCTCAATAAGAGGATCC+CGG | 0.606800 | 5.4:-72968248 | None:intergenic |
| GCCGGTTCTCTCATCAACAA+TGG | 0.606987 | 5.4:-72964858 | None:intergenic |
| TGGCTGGGTACTTGTCACAT+TGG | 0.607219 | 5.4:+72968621 | MS.gene038380:CDS |
| TCATTGAAGGTGTCAAAACC+AGG | 0.607983 | 5.4:+72967972 | MS.gene038380:CDS |
| TCATTAGCTCCACCATGAAG+AGG | 0.611745 | 5.4:-72967760 | None:intergenic |
| TCAGCTAACTGACTTTCGGT+GGG | 0.613735 | 5.4:-72966308 | None:intergenic |
| CTCTGTGTAAGATAGTTGGT+TGG | 0.614627 | 5.4:-72967361 | None:intergenic |
| ATTATACGCCAATCAAGCAA+AGG | 0.618602 | 5.4:+72968810 | MS.gene038380:CDS |
| GCATTCACAAGGACACCCAT+AGG | 0.619076 | 5.4:-72966877 | None:intergenic |
| AACTACCTTCTTGAGATCAG+TGG | 0.619966 | 5.4:-72964924 | None:intergenic |
| ACAAGTACCCAGCCATTCGA+GGG | 0.620344 | 5.4:-72968613 | None:intergenic |
| CCTCATGATGCACATCCTAT+GGG | 0.621507 | 5.4:+72966862 | MS.gene038380:CDS |
| TGGTTGGATGGAAGCACAGG+AGG | 0.622383 | 5.4:-72967345 | None:intergenic |
| AATACCTTGATGCAAGGTGT+CGG | 0.625696 | 5.4:-72967616 | None:intergenic |
| TTTATCTTAGAATGGCAGGA+AGG | 0.631134 | 5.4:+72967322 | MS.gene038380:CDS |
| TGGATTGCTCGTTGCCGGAG+GGG | 0.631504 | 5.4:-72964766 | None:intergenic |
| GAGGGTGGCTAAACGAGCAA+GGG | 0.631629 | 5.4:-72964729 | None:intergenic |
| CCATATCAAATGCCTCAAAG+AGG | 0.638296 | 5.4:+72968870 | MS.gene038380:CDS |
| CCCATAGGATGTGCATCATG+AGG | 0.645354 | 5.4:-72966862 | None:intergenic |
| AGACAGGGTGAAGGATGAGG+AGG | 0.646402 | 5.4:-72964796 | None:intergenic |
| AAAACTGTGAAATACTCGGG+TGG | 0.654400 | 5.4:-72968581 | None:intergenic |
| AACAGATTCACAACCACCAG+CGG | 0.655832 | 5.4:+72964700 | MS.gene038380:CDS |
| GAAGGGATTCTTAGATACAG+AGG | 0.673586 | 5.4:+72965862 | MS.gene038380:CDS |
| ATACTCGGGTGGAAAACCCA+TGG | 0.675324 | 5.4:-72968570 | None:intergenic |
| ATTGAGCTAAGACAGGGTGA+AGG | 0.675884 | 5.4:-72964805 | None:intergenic |
| GCGGTGATTGAGCTAAGACA+GGG | 0.681312 | 5.4:-72964811 | None:intergenic |
| GAGCACTTATGGCATTCACA+AGG | 0.685545 | 5.4:-72966888 | None:intergenic |
| TCTAGTGCACGAGTTAGCTG+AGG | 0.687187 | 5.4:-72967539 | None:intergenic |
| CTATATGGACCTCTTCATGG+TGG | 0.692671 | 5.4:+72967751 | MS.gene038380:CDS |
| TGTATATACAGCTATTGCCG+GGG | 0.700722 | 5.4:+72967717 | MS.gene038380:CDS |
| GCAAGGGAGAGTACCGCTGG+TGG | 0.701177 | 5.4:-72964713 | None:intergenic |
| GTGCCATTGAGGTTGGCCAG+CGG | 0.703852 | 5.4:-72964830 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCTTATAATTTATTGC+AGG | + | chr5.4:72967058-72967077 | MS.gene038380:intron | 15.0% |
| !!! | CAAATAAAACTATCATTTTT+GGG | - | chr5.4:72968099-72968118 | None:intergenic | 15.0% |
| !!! | GATTTTTTTATTGAATTGTT+TGG | + | chr5.4:72965001-72965020 | MS.gene038380:intron | 15.0% |
| !!! | TCAAATAAAACTATCATTTT+TGG | - | chr5.4:72968100-72968119 | None:intergenic | 15.0% |
| !!! | TCATCTTAATTTTATTTTGT+AGG | + | chr5.4:72966822-72966841 | MS.gene038380:intron | 15.0% |
| !!! | TTACTTTCTTTTTGTTAATT+GGG | + | chr5.4:72968001-72968020 | MS.gene038380:intron | 15.0% |
| !!! | TTTTCTTATAATTTATTGCA+GGG | + | chr5.4:72967059-72967078 | MS.gene038380:intron | 15.0% |
| !! | AAATAAAACTGTGAAATACT+CGG | - | chr5.4:72968588-72968607 | None:intergenic | 20.0% |
| !! | ATGCAATTATTTGATTATTC+AGG | + | chr5.4:72968345-72968364 | MS.gene038380:intron | 20.0% |
| !! | CAGAGAAATTATTTAAAGAA+AGG | - | chr5.4:72968702-72968721 | None:intergenic | 20.0% |
| !! | CTTTCTTTAAATAATTTCTC+TGG | + | chr5.4:72968700-72968719 | MS.gene038380:intron | 20.0% |
| !! | GTAATAAATTTATGCAATCA+GGG | + | chr5.4:72968547-72968566 | MS.gene038380:intron | 20.0% |
| !! | TCAACAATTAGTTATATTGA+CGG | + | chr5.4:72965835-72965854 | MS.gene038380:CDS | 20.0% |
| !! | TGAATAATCAAATAATTGCA+TGG | - | chr5.4:72968346-72968365 | None:intergenic | 20.0% |
| !! | TTATTATATAAGTGGTTGTT+TGG | + | chr5.4:72965148-72965167 | MS.gene038380:intron | 20.0% |
| !!! | AAAAATCTATAAGCTTTGTA+AGG | - | chr5.4:72966076-72966095 | None:intergenic | 20.0% |
| !!! | AAAATCTATAAGCTTTGTAA+GGG | - | chr5.4:72966075-72966094 | None:intergenic | 20.0% |
| !!! | AGGTGTAATAATTTTTCTTA+TGG | + | chr5.4:72966593-72966612 | MS.gene038380:intron | 20.0% |
| !!! | ATTCTGTTTTAGGTTTATAT+CGG | + | chr5.4:72968773-72968792 | MS.gene038380:intron | 20.0% |
| !!! | ATTTTTATAGATGTATGCTT+AGG | + | chr5.4:72966762-72966781 | MS.gene038380:intron | 20.0% |
| !!! | GGTGTAATAATTTTTCTTAT+GGG | + | chr5.4:72966594-72966613 | MS.gene038380:intron | 20.0% |
| !!! | GTGTAATAATTTTTCTTATG+GGG | + | chr5.4:72966595-72966614 | MS.gene038380:intron | 20.0% |
| !!! | GTTACTTTCTTTTTGTTAAT+TGG | + | chr5.4:72968000-72968019 | MS.gene038380:intron | 20.0% |
| !!! | TTCAAATCGACTTAATAAAT+TGG | - | chr5.4:72968748-72968767 | None:intergenic | 20.0% |
| !!! | TTGATAGCAATATTTTTATG+AGG | + | chr5.4:72966573-72966592 | MS.gene038380:intron | 20.0% |
| !!! | TTGATTCTTTGTATGTTTTA+TGG | + | chr5.4:72967400-72967419 | MS.gene038380:intron | 20.0% |
| !!! | TTTTCATAAGTTATCCTAAA+TGG | - | chr5.4:72965217-72965236 | None:intergenic | 20.0% |
| ! | AAGAATAAAATAGGGATGTT+TGG | - | chr5.4:72965677-72965696 | None:intergenic | 25.0% |
| ! | AATAAAACTGTGAAATACTC+GGG | - | chr5.4:72968587-72968606 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCAGAAC+AGG | + | chr5.4:72965411-72965430 | MS.gene038380:intron | 25.0% |
| ! | ACTACTCAACATAAAGTAAT+CGG | + | chr5.4:72967653-72967672 | MS.gene038380:intron | 25.0% |
| ! | AGATCAAATTATAGTTCCTT+CGG | - | chr5.4:72967460-72967479 | None:intergenic | 25.0% |
| ! | ATAAGCGCTTATTATATAAG+TGG | + | chr5.4:72965140-72965159 | MS.gene038380:intron | 25.0% |
| ! | ATAAGTTGTTTATCAGAACA+GGG | + | chr5.4:72965412-72965431 | MS.gene038380:intron | 25.0% |
| ! | ATAATAACTACTATGACTCT+GGG | - | chr5.4:72966182-72966201 | None:intergenic | 25.0% |
| ! | GGTAATAAATTTATGCAATC+AGG | + | chr5.4:72968546-72968565 | MS.gene038380:intron | 25.0% |
| ! | TAACTAATTGTTGATCTAAC+AGG | - | chr5.4:72965829-72965848 | None:intergenic | 25.0% |
| ! | TATAATAACTACTATGACTC+TGG | - | chr5.4:72966183-72966202 | None:intergenic | 25.0% |
| ! | TCTACTCTGGATTAATTTAT+AGG | + | chr5.4:72968443-72968462 | MS.gene038380:CDS | 25.0% |
| ! | TCTTGATATTTACAACTCAA+AGG | + | chr5.4:72967082-72967101 | MS.gene038380:CDS | 25.0% |
| ! | TTCAAAGATTAGTAACTTGA+TGG | - | chr5.4:72966970-72966989 | None:intergenic | 25.0% |
| ! | TTCATTATACTGAACCATAT+CGG | - | chr5.4:72968296-72968315 | None:intergenic | 25.0% |
| ! | TTGAAATTTCATATTGTCGT+AGG | + | chr5.4:72966536-72966555 | MS.gene038380:intron | 25.0% |
| ! | TTGTATATAAAAGAGACAGA+GGG | - | chr5.4:72967178-72967197 | None:intergenic | 25.0% |
| !! | AAGCATTGTATGATATTCTT+GGG | - | chr5.4:72968524-72968543 | None:intergenic | 25.0% |
| !! | GATCATAGTTTTTGTAAACT+CGG | - | chr5.4:72968176-72968195 | None:intergenic | 25.0% |
| !! | GTATGTTTTATGGTTCTTTT+AGG | + | chr5.4:72967410-72967429 | MS.gene038380:intron | 25.0% |
| !! | TCACTTACTAATTTTCTAAC+TGG | + | chr5.4:72966734-72966753 | MS.gene038380:intron | 25.0% |
| !! | TGTTTTACAGCTTGTATATT+TGG | + | chr5.4:72967222-72967241 | MS.gene038380:intron | 25.0% |
| !! | TTGAATGTACATTCTGTTTT+AGG | + | chr5.4:72968763-72968782 | MS.gene038380:intron | 25.0% |
| !!! | AAAGAAGAGCATTCAATAAT+AGG | - | chr5.4:72965040-72965059 | None:intergenic | 25.0% |
| !!! | TACTTTTTCTCGATTTGTTA+TGG | + | chr5.4:72968029-72968048 | MS.gene038380:intron | 25.0% |
| !!! | TCGAGAGAGTTTTTAAAAAA+CGG | + | chr5.4:72966109-72966128 | MS.gene038380:intron | 25.0% |
| !!! | TTTATATATTAGTGCCGATA+TGG | + | chr5.4:72968279-72968298 | MS.gene038380:intron | 25.0% |
| AAAATGAATACCTTGATGCA+AGG | - | chr5.4:72967625-72967644 | None:intergenic | 30.0% | |
| AAACAAATAGCTCGGATTAT+TGG | + | chr5.4:72967116-72967135 | MS.gene038380:CDS | 30.0% | |
| AACAGTTGTTTATCCAAACA+AGG | - | chr5.4:72965120-72965139 | None:intergenic | 30.0% | |
| AACATTCCAGAATTCATTGA+AGG | + | chr5.4:72967959-72967978 | MS.gene038380:CDS | 30.0% | |
| AAGCAAGTTTGAAAAGCTTA+TGG | + | chr5.4:72965513-72965532 | MS.gene038380:intron | 30.0% | |
| AATATGACCTTTGATTCTGT+AGG | + | chr5.4:72967898-72967917 | MS.gene038380:intron | 30.0% | |
| AATTAATTGTGTTGTACCTG+TGG | + | chr5.4:72965702-72965721 | MS.gene038380:intron | 30.0% | |
| AGAATATCATACAATGCTTG+AGG | + | chr5.4:72968525-72968544 | MS.gene038380:intron | 30.0% | |
| AGCATTGTATGATATTCTTG+GGG | - | chr5.4:72968523-72968542 | None:intergenic | 30.0% | |
| AGTATGTTACAATAAAGCAG+TGG | - | chr5.4:72967266-72967285 | None:intergenic | 30.0% | |
| ATACAAAAGAACCCTGTAAA+TGG | - | chr5.4:72966802-72966821 | None:intergenic | 30.0% | |
| ATCGGCACTAATATATAAAC+TGG | - | chr5.4:72968278-72968297 | None:intergenic | 30.0% | |
| CAGTAACTAGATGAAATCAT+AGG | - | chr5.4:72968472-72968491 | None:intergenic | 30.0% | |
| CTGATGAATATTTCATCAAG+AGG | + | chr5.4:72968398-72968417 | MS.gene038380:CDS | 30.0% | |
| CTGCATATCATGCAATTATA+TGG | + | chr5.4:72966996-72967015 | MS.gene038380:intron | 30.0% | |
| CTGTATAGTAATACAATCAG+TGG | - | chr5.4:72966515-72966534 | None:intergenic | 30.0% | |
| CTTGACAGAGTTTATGAATA+TGG | - | chr5.4:72965575-72965594 | None:intergenic | 30.0% | |
| CTTGTATATAAAAGAGACAG+AGG | - | chr5.4:72967179-72967198 | None:intergenic | 30.0% | |
| GAAGCAAAAATGCTATGATT+TGG | - | chr5.4:72966458-72966477 | None:intergenic | 30.0% | |
| GATCAAATTATAGTTCCTTC+GGG | - | chr5.4:72967459-72967478 | None:intergenic | 30.0% | |
| TATACAAGCTGTAAAACAAG+TGG | - | chr5.4:72967220-72967239 | None:intergenic | 30.0% | |
| TTACAAAAACTATGATCCCA+GGG | + | chr5.4:72968179-72968198 | MS.gene038380:CDS | 30.0% | |
| TTCATTTGCAACCATTTACA+GGG | + | chr5.4:72966788-72966807 | MS.gene038380:intron | 30.0% | |
| TTTACAAAAACTATGATCCC+AGG | + | chr5.4:72968178-72968197 | MS.gene038380:CDS | 30.0% | |
| TTTATATCGGAGAATGGTTA+CGG | + | chr5.4:72968786-72968805 | MS.gene038380:CDS | 30.0% | |
| TTTCATTTGCAACCATTTAC+AGG | + | chr5.4:72966787-72966806 | MS.gene038380:intron | 30.0% | |
| ! | AATCATAGCATTTTTGCTTC+AGG | + | chr5.4:72966458-72966477 | MS.gene038380:intron | 30.0% |
| ! | CAAGCATTGTATGATATTCT+TGG | - | chr5.4:72968525-72968544 | None:intergenic | 30.0% |
| ! | GAAGCTTTTCTTTACTTACT+TGG | - | chr5.4:72966948-72966967 | None:intergenic | 30.0% |
| ! | GACATTTTAAATAAGCTGCT+TGG | - | chr5.4:72966246-72966265 | None:intergenic | 30.0% |
| ! | GCTCTTCTTTTTGTTCATTA+TGG | + | chr5.4:72965050-72965069 | MS.gene038380:intron | 30.0% |
| ! | TAACTGTTATCTTGTTTCAG+TGG | + | chr5.4:72967688-72967707 | MS.gene038380:intron | 30.0% |
| ! | TGATTTCACTTAGCATTTTG+AGG | - | chr5.4:72967928-72967947 | None:intergenic | 30.0% |
| ! | TTTAGGTTTATATCGGAGAA+TGG | + | chr5.4:72968780-72968799 | MS.gene038380:intron | 30.0% |
| ! | TTTTCTCTCTCTTTTTCTTC+TGG | + | chr5.4:72966651-72966670 | MS.gene038380:intron | 30.0% |
| !! | TAAGTTTTGTGAGACCATTT+AGG | + | chr5.4:72965200-72965219 | MS.gene038380:intron | 30.0% |
| !!! | TAATGTTTCTTTTTTCCCGA+AGG | + | chr5.4:72967441-72967460 | MS.gene038380:intron | 30.0% |
| !!! | TTCTCTTTTTTCCAAGTGTA+TGG | + | chr5.4:72966278-72966297 | MS.gene038380:intron | 30.0% |
| AAAAGAAAGTAACAGCTACC+TGG | - | chr5.4:72967993-72968012 | None:intergenic | 35.0% | |
| AAAATCTTATACACGCACAC+TGG | - | chr5.4:72965967-72965986 | None:intergenic | 35.0% | |
| AAAGATTATGAGACCTCAAC+AGG | + | chr5.4:72968670-72968689 | MS.gene038380:CDS | 35.0% | |
| AATAGCTCGGATTATTGGAA+AGG | + | chr5.4:72967121-72967140 | MS.gene038380:CDS | 35.0% | |
| AGTTATATTGACGGTGATGA+AGG | + | chr5.4:72965844-72965863 | MS.gene038380:CDS | 35.0% | |
| AGTTCTCTGTGTAAGATAGT+TGG | - | chr5.4:72967368-72967387 | None:intergenic | 35.0% | |
| ATATTGTCGTAGGAATGTAG+TGG | + | chr5.4:72966546-72966565 | MS.gene038380:intron | 35.0% | |
| ATCGACTGGTAAAAATGACA+AGG | + | chr5.4:72965765-72965784 | MS.gene038380:CDS | 35.0% | |
| ATGTATATACAGCTATTGCC+GGG | + | chr5.4:72967716-72967735 | MS.gene038380:CDS | 35.0% | |
| ATTATACGCCAATCAAGCAA+AGG | + | chr5.4:72968810-72968829 | MS.gene038380:CDS | 35.0% | |
| ATTGCGTTCATGTAAGCTAT+AGG | + | chr5.4:72965480-72965499 | MS.gene038380:intron | 35.0% | |
| GATGTATATACAGCTATTGC+CGG | + | chr5.4:72967715-72967734 | MS.gene038380:CDS | 35.0% | |
| GGTCTCATAATCTTTGTATC+AGG | - | chr5.4:72968665-72968684 | None:intergenic | 35.0% | |
| GGTCTTAAAAAAACTGACAG+AGG | + | chr5.4:72968206-72968225 | MS.gene038380:CDS | 35.0% | |
| GTTATATTGACGGTGATGAA+GGG | + | chr5.4:72965845-72965864 | MS.gene038380:CDS | 35.0% | |
| TCGACTGGTAAAAATGACAA+GGG | + | chr5.4:72965766-72965785 | MS.gene038380:CDS | 35.0% | |
| TCTCTCATCAACAATGGTTA+AGG | - | chr5.4:72964855-72964874 | None:intergenic | 35.0% | |
| TGAGAGACAAACAAATAGCT+CGG | + | chr5.4:72967108-72967127 | MS.gene038380:CDS | 35.0% | |
| TGCTGCAGTTTATCTTAGAA+TGG | + | chr5.4:72967314-72967333 | MS.gene038380:CDS | 35.0% | |
| TGGATAAACACCTCAATAAG+AGG | - | chr5.4:72968258-72968277 | None:intergenic | 35.0% | |
| TTCATCTAGTTACTGTGTCT+AGG | + | chr5.4:72968477-72968496 | MS.gene038380:intron | 35.0% | |
| TTGAACTTGGTATTTCTTGC+CGG | - | chr5.4:72964879-72964898 | None:intergenic | 35.0% | |
| TTGACACCTTCAATGAATTC+TGG | - | chr5.4:72967968-72967987 | None:intergenic | 35.0% | |
| TTTATCTTAGAATGGCAGGA+AGG | + | chr5.4:72967322-72967341 | MS.gene038380:CDS | 35.0% | |
| ! | AATGCTATGATTTGGCAGAT+AGG | - | chr5.4:72966450-72966469 | None:intergenic | 35.0% |
| ! | CTTCTGGTTGAAGCAAAATT+TGG | + | chr5.4:72966667-72966686 | MS.gene038380:intron | 35.0% |
| ! | CTTGTTGATTATGCCTTGTT+TGG | + | chr5.4:72965104-72965123 | MS.gene038380:intron | 35.0% |
| ! | TTTATTGTGCGTGCTTTAAG+AGG | + | chr5.4:72967494-72967513 | MS.gene038380:intron | 35.0% |
| !! | AAAGACAGAAAGAGCACTTA+TGG | - | chr5.4:72966902-72966921 | None:intergenic | 35.0% |
| !! | TTTATTTGCTATCCCTCGAA+TGG | + | chr5.4:72968601-72968620 | MS.gene038380:CDS | 35.0% |
| !!! | TTTTTTAAGACCTTTGCCCT+GGG | - | chr5.4:72968198-72968217 | None:intergenic | 35.0% |
| !!! | TTTTTTTAAGACCTTTGCCC+TGG | - | chr5.4:72968199-72968218 | None:intergenic | 35.0% |
| AAAACTGTGAAATACTCGGG+TGG | - | chr5.4:72968584-72968603 | None:intergenic | 40.0% | |
| AAAAGAGACAGAGGGATGAA+AGG | - | chr5.4:72967170-72967189 | None:intergenic | 40.0% | |
| AAACTCACCAAAACTCCTTG+TGG | - | chr5.4:72966368-72966387 | None:intergenic | 40.0% | |
| AACTACCTTCTTGAGATCAG+TGG | - | chr5.4:72964927-72964946 | None:intergenic | 40.0% | |
| AAGTTAGAGAACACCACACA+AGG | - | chr5.4:72965728-72965747 | None:intergenic | 40.0% | |
| AATACCTTGATGCAAGGTGT+CGG | - | chr5.4:72967619-72967638 | None:intergenic | 40.0% | |
| AATTTATGCAATCAGGGCCA+TGG | + | chr5.4:72968553-72968572 | MS.gene038380:intron | 40.0% | |
| ACTGTATGTGCTTGTGCTAT+AGG | + | chr5.4:72965383-72965402 | MS.gene038380:intron | 40.0% | |
| ATTTATGCAATCAGGGCCAT+GGG | + | chr5.4:72968554-72968573 | MS.gene038380:intron | 40.0% | |
| CATCTGGAGAAACTTGAACT+TGG | - | chr5.4:72964892-72964911 | None:intergenic | 40.0% | |
| CCAGAGTAGAAGTCAACATT+TGG | - | chr5.4:72968433-72968452 | None:intergenic | 40.0% | |
| CCATATCAAATGCCTCAAAG+AGG | + | chr5.4:72968870-72968889 | MS.gene038380:CDS | 40.0% | |
| CGTTTCCTGGAGAAAAATAC+AGG | - | chr5.4:72968132-72968151 | None:intergenic | 40.0% | |
| CTCTGTGTAAGATAGTTGGT+TGG | - | chr5.4:72967364-72967383 | None:intergenic | 40.0% | |
| GAAGGGATTCTTAGATACAG+AGG | + | chr5.4:72965862-72965881 | MS.gene038380:CDS | 40.0% | |
| GAGACTATCCTTTGCTTGAT+TGG | - | chr5.4:72968821-72968840 | None:intergenic | 40.0% | |
| GAGGATTGGGTTTATATGAC+CGG | - | chr5.4:72967523-72967542 | None:intergenic | 40.0% | |
| GCAGTTTATCTTAGAATGGC+AGG | + | chr5.4:72967318-72967337 | MS.gene038380:CDS | 40.0% | |
| GGACTCAAGTTATATGATCC+TGG | + | chr5.4:72965787-72965806 | MS.gene038380:CDS | 40.0% | |
| GTGTAAGATAGTTGGTTGGA+TGG | - | chr5.4:72967360-72967379 | None:intergenic | 40.0% | |
| TCTTTACTTACTTGGAGAGC+AGG | - | chr5.4:72966940-72966959 | None:intergenic | 40.0% | |
| TGGGTAAACTTCCATACACT+TGG | - | chr5.4:72966292-72966311 | None:intergenic | 40.0% | |
| TGTATATACAGCTATTGCCG+GGG | + | chr5.4:72967717-72967736 | MS.gene038380:CDS | 40.0% | |
| ! | AAGTGTTTTCCATTGTTGGC+CGG | + | chr5.4:72968229-72968248 | MS.gene038380:CDS | 40.0% |
| ! | ACCATTGTTGATGAGAGAAC+CGG | + | chr5.4:72964857-72964876 | MS.gene038380:CDS | 40.0% |
| ! | CAAGTTCAAGTTTCTCCAGA+TGG | + | chr5.4:72964890-72964909 | MS.gene038380:CDS | 40.0% |
| ! | CCATTCAGCTAACTGACTTT+CGG | - | chr5.4:72966315-72966334 | None:intergenic | 40.0% |
| ! | CTTGTCCTGTATTTTTCTCC+AGG | + | chr5.4:72968124-72968143 | MS.gene038380:intron | 40.0% |
| ! | GTTATCTTGTTTCAGTGGTG+TGG | + | chr5.4:72967693-72967712 | MS.gene038380:intron | 40.0% |
| ! | TTGCTCTTGTTGCCTCTTTT+GGG | + | chr5.4:72968065-72968084 | MS.gene038380:intron | 40.0% |
| !! | AAACGAAAGCTCTCTGGTTT+TGG | + | chr5.4:72968147-72968166 | MS.gene038380:CDS | 40.0% |
| !! | CCAAATGTTGACTTCTACTC+TGG | + | chr5.4:72968430-72968449 | MS.gene038380:CDS | 40.0% |
| !! | CCTCTTTGAGGCATTTGATA+TGG | - | chr5.4:72968873-72968892 | None:intergenic | 40.0% |
| !! | TATTCAGGTTGCAGTTGCTT+TGG | + | chr5.4:72968360-72968379 | MS.gene038380:intron | 40.0% |
| !! | TCATTGAAGGTGTCAAAACC+AGG | + | chr5.4:72967972-72967991 | MS.gene038380:CDS | 40.0% |
| !!! | GAGGAAGTGTTTTCCATTGT+TGG | + | chr5.4:72968225-72968244 | MS.gene038380:CDS | 40.0% |
| !!! | GGCAGAGAAAAGCACTTTTA+TGG | + | chr5.4:72965903-72965922 | MS.gene038380:CDS | 40.0% |
| AAACTATGATCCCAGGGCAA+AGG | + | chr5.4:72968185-72968204 | MS.gene038380:CDS | 45.0% | |
| AACAGATTCACAACCACCAG+CGG | + | chr5.4:72964700-72964719 | MS.gene038380:CDS | 45.0% | |
| ACAAAACCGATGAGACTGTG+AGG | - | chr5.4:72966416-72966435 | None:intergenic | 45.0% | |
| ACACCTCAATAAGAGGATCC+CGG | - | chr5.4:72968251-72968270 | None:intergenic | 45.0% | |
| AGGACAGCCTACAGAATCAA+AGG | - | chr5.4:72967908-72967927 | None:intergenic | 45.0% | |
| AGTAACCCTCACAGTCTCAT+CGG | + | chr5.4:72966407-72966426 | MS.gene038380:intron | 45.0% | |
| ATACAGAGGCTACCCAATTG+AGG | + | chr5.4:72965876-72965895 | MS.gene038380:CDS | 45.0% | |
| ATTGAGCTAAGACAGGGTGA+AGG | - | chr5.4:72964808-72964827 | None:intergenic | 45.0% | |
| CAAAACCGATGAGACTGTGA+GGG | - | chr5.4:72966415-72966434 | None:intergenic | 45.0% | |
| CAAAGCCACTGATCTCAAGA+AGG | + | chr5.4:72964919-72964938 | MS.gene038380:CDS | 45.0% | |
| CCGAAAGTCAGTTAGCTGAA+TGG | + | chr5.4:72966312-72966331 | MS.gene038380:CDS | 45.0% | |
| CCTCATGATGCACATCCTAT+GGG | + | chr5.4:72966862-72966881 | MS.gene038380:CDS | 45.0% | |
| CTATATGGACCTCTTCATGG+TGG | + | chr5.4:72967751-72967770 | MS.gene038380:CDS | 45.0% | |
| GAGCACTTATGGCATTCACA+AGG | - | chr5.4:72966891-72966910 | None:intergenic | 45.0% | |
| GCTCTATATGGACCTCTTCA+TGG | + | chr5.4:72967748-72967767 | MS.gene038380:CDS | 45.0% | |
| GGAGCTGTGTTTAAATAGCC+AGG | - | chr5.4:72965808-72965827 | None:intergenic | 45.0% | |
| GTCTATCTGCAGATATCGAC+TGG | + | chr5.4:72965751-72965770 | MS.gene038380:intron | 45.0% | |
| TCAAGTGATGCTGACAAGCT+TGG | + | chr5.4:72968839-72968858 | MS.gene038380:CDS | 45.0% | |
| TCATTAGCTCCACCATGAAG+AGG | - | chr5.4:72967763-72967782 | None:intergenic | 45.0% | |
| TCATTTCATGTTCTGCGTGC+AGG | - | chr5.4:72967577-72967596 | None:intergenic | 45.0% | |
| TCTCTGCCAACTCCTCAATT+GGG | - | chr5.4:72965891-72965910 | None:intergenic | 45.0% | |
| TGGGTACTTGTCACATTGGA+GGG | + | chr5.4:72968625-72968644 | MS.gene038380:CDS | 45.0% | |
| TTCTCTGCCAACTCCTCAAT+TGG | - | chr5.4:72965892-72965911 | None:intergenic | 45.0% | |
| TTGGAGAGCAGGATTTGCAT+CGG | - | chr5.4:72966929-72966948 | None:intergenic | 45.0% | |
| ! | AGCTGTTCCACAAGGAGTTT+TGG | + | chr5.4:72966358-72966377 | MS.gene038380:CDS | 45.0% |
| ! | AGTGTTTTCCATTGTTGGCC+GGG | + | chr5.4:72968230-72968249 | MS.gene038380:CDS | 45.0% |
| ! | GTTGCTCTTGTTGCCTCTTT+TGG | + | chr5.4:72968064-72968083 | MS.gene038380:intron | 45.0% |
| ! | TCAGCTAACTGACTTTCGGT+GGG | - | chr5.4:72966311-72966330 | None:intergenic | 45.0% |
| ! | TCTTCATGGTGGAGCTAATG+AGG | + | chr5.4:72967762-72967781 | MS.gene038380:CDS | 45.0% |
| ! | TGCTCTTGTTGCCTCTTTTG+GGG | + | chr5.4:72968066-72968085 | MS.gene038380:intron | 45.0% |
| ! | TTCAGCTAACTGACTTTCGG+TGG | - | chr5.4:72966312-72966331 | None:intergenic | 45.0% |
| !! | CAATGGTTAAGGTGCCATTG+AGG | - | chr5.4:72964844-72964863 | None:intergenic | 45.0% |
| !!! | AGTCTCATCGGTTTTGTGGT+TGG | + | chr5.4:72966419-72966438 | MS.gene038380:intron | 45.0% |
| !!! | TCACAGTCTCATCGGTTTTG+TGG | + | chr5.4:72966415-72966434 | MS.gene038380:intron | 45.0% |
| !! | AATTATTAAAAGAATAAAAT+AGG | - | chr5.4:72965686-72965705 | None:intergenic | 5.0% |
| !! | ATTATTAAAAGAATAAAATA+GGG | - | chr5.4:72965685-72965704 | None:intergenic | 5.0% |
| ACAAGTACCCAGCCATTCGA+GGG | - | chr5.4:72968616-72968635 | None:intergenic | 50.0% | |
| ACCAGAGAGCTTTCGTTTCC+TGG | - | chr5.4:72968145-72968164 | None:intergenic | 50.0% | |
| AGCGGTGATTGAGCTAAGAC+AGG | - | chr5.4:72964815-72964834 | None:intergenic | 50.0% | |
| AGGCTACCCAATTGAGGAGT+TGG | + | chr5.4:72965882-72965901 | MS.gene038380:CDS | 50.0% | |
| ATACTCGGGTGGAAAACCCA+TGG | - | chr5.4:72968573-72968592 | None:intergenic | 50.0% | |
| ATATAGAGCTCCAACAGCCC+CGG | - | chr5.4:72967737-72967756 | None:intergenic | 50.0% | |
| CAGCATTCAGCTGTTCCACA+AGG | + | chr5.4:72966350-72966369 | MS.gene038380:CDS | 50.0% | |
| CCCATAGGATGTGCATCATG+AGG | - | chr5.4:72966865-72966884 | None:intergenic | 50.0% | |
| CTAAGACAGGGTGAAGGATG+AGG | - | chr5.4:72964802-72964821 | None:intergenic | 50.0% | |
| CTGGGTACTTGTCACATTGG+AGG | + | chr5.4:72968624-72968643 | MS.gene038380:CDS | 50.0% | |
| GCACGAGTTAGCTGAGGATT+GGG | - | chr5.4:72967536-72967555 | None:intergenic | 50.0% | |
| GCATTCACAAGGACACCCAT+AGG | - | chr5.4:72966880-72966899 | None:intergenic | 50.0% | |
| GCCTCATGATGCACATCCTA+TGG | + | chr5.4:72966861-72966880 | MS.gene038380:CDS | 50.0% | |
| GCGGTGATTGAGCTAAGACA+GGG | - | chr5.4:72964814-72964833 | None:intergenic | 50.0% | |
| GTCACATTGGAGGGAGTCAT+TGG | + | chr5.4:72968634-72968653 | MS.gene038380:CDS | 50.0% | |
| GTGAAGGATGAGGAGGTGAT+CGG | - | chr5.4:72964792-72964811 | None:intergenic | 50.0% | |
| TCCAGGAAACGAAAGCTCTC+TGG | + | chr5.4:72968141-72968160 | MS.gene038380:intron | 50.0% | |
| TCTAGTGCACGAGTTAGCTG+AGG | - | chr5.4:72967542-72967561 | None:intergenic | 50.0% | |
| TGCACGAGTTAGCTGAGGAT+TGG | - | chr5.4:72967537-72967556 | None:intergenic | 50.0% | |
| TGGAGAGCAGGATTTGCATC+GGG | - | chr5.4:72966928-72966947 | None:intergenic | 50.0% | |
| TGGCTGGGTACTTGTCACAT+TGG | + | chr5.4:72968621-72968640 | MS.gene038380:CDS | 50.0% | |
| TGTCTTAGCTCAATCACCGC+TGG | + | chr5.4:72964814-72964833 | MS.gene038380:CDS | 50.0% | |
| TTGCTATCCCTCGAATGGCT+GGG | + | chr5.4:72968606-72968625 | MS.gene038380:CDS | 50.0% | |
| ! | AGTTGGTTGGATGGAAGCAC+AGG | - | chr5.4:72967351-72967370 | None:intergenic | 50.0% |
| ! | CTCTTGTTGCCTCTTTTGGG+GGG | + | chr5.4:72968068-72968087 | MS.gene038380:intron | 50.0% |
| ! | GCCGGTTCTCTCATCAACAA+TGG | - | chr5.4:72964861-72964880 | None:intergenic | 50.0% |
| ! | GCTCTTGTTGCCTCTTTTGG+GGG | + | chr5.4:72968067-72968086 | MS.gene038380:intron | 50.0% |
| ! | TTTGCTATCCCTCGAATGGC+TGG | + | chr5.4:72968605-72968624 | MS.gene038380:CDS | 50.0% |
| !! | GGTTAAGGTGCCATTGAGGT+TGG | - | chr5.4:72964840-72964859 | None:intergenic | 50.0% |
| !! | GGTTGCAGTTGCTTTGGAGA+AGG | + | chr5.4:72968366-72968385 | MS.gene038380:intron | 50.0% |
| !! | TGCGTGCTTTAAGAGGCAAC+CGG | + | chr5.4:72967501-72967520 | MS.gene038380:intron | 50.0% |
| AAGAGGATCCCGGCCAACAA+TGG | - | chr5.4:72968241-72968260 | None:intergenic | 55.0% | |
| AAGGATGAGGAGGTGATCGG+TGG | - | chr5.4:72964789-72964808 | None:intergenic | 55.0% | |
| AGAACACCACACAAGGCCAC+AGG | - | chr5.4:72965721-72965740 | None:intergenic | 55.0% | |
| AGACAGGGTGAAGGATGAGG+AGG | - | chr5.4:72964799-72964818 | None:intergenic | 55.0% | |
| AGAGGGTGGCTAAACGAGCA+AGG | - | chr5.4:72964733-72964752 | None:intergenic | 55.0% | |
| CTGTCCGACACCTTGCATCA+AGG | + | chr5.4:72967612-72967631 | MS.gene038380:CDS | 55.0% | |
| GACAAGTACCCAGCCATTCG+AGG | - | chr5.4:72968617-72968636 | None:intergenic | 55.0% | |
| GAGGGTGGCTAAACGAGCAA+GGG | - | chr5.4:72964732-72964751 | None:intergenic | 55.0% | |
| GGGGCTGTTGGAGCTCTATA+TGG | + | chr5.4:72967736-72967755 | MS.gene038380:CDS | 55.0% | |
| TCCAGCAAGTCGCCTCTTTG+AGG | - | chr5.4:72968885-72968904 | None:intergenic | 55.0% | |
| TGGCCGGGATCCTCTTATTG+AGG | + | chr5.4:72968245-72968264 | MS.gene038380:CDS | 55.0% | |
| TGGGAAGAACCCCCCAAAAG+AGG | - | chr5.4:72968080-72968099 | None:intergenic | 55.0% | |
| ! | TGGTTGGATGGAAGCACAGG+AGG | - | chr5.4:72967348-72967367 | None:intergenic | 55.0% |
| !! | AGAGGCGACTTGCTGGATCT+AGG | + | chr5.4:72968888-72968907 | MS.gene038380:CDS | 55.0% |
| !! | ATCGGTGGATTGCTCGTTGC+CGG | - | chr5.4:72964774-72964793 | None:intergenic | 55.0% |
| !! | GTGGCTTTGACAGTGCCATC+TGG | - | chr5.4:72964908-72964927 | None:intergenic | 55.0% |
| !! | GTTGTACCTGTGGCCTTGTG+TGG | + | chr5.4:72965712-72965731 | MS.gene038380:intron | 55.0% |
| ACAGCTATTGCCGGGGCTGT+TGG | + | chr5.4:72967724-72967743 | MS.gene038380:CDS | 60.0% | |
| AGGGGAGAAGGTGAGCTGAG+AGG | - | chr5.4:72964751-72964770 | None:intergenic | 60.0% | |
| GAGAAGGTGAGCTGAGAGGG+TGG | - | chr5.4:72964747-72964766 | None:intergenic | 60.0% | |
| GCCTCAAAGAGGCGACTTGC+TGG | + | chr5.4:72968881-72968900 | MS.gene038380:CDS | 60.0% | |
| GGGGAGAAGGTGAGCTGAGA+GGG | - | chr5.4:72964750-72964769 | None:intergenic | 60.0% | |
| TCACCGCTGGCCAACCTCAA+TGG | + | chr5.4:72964827-72964846 | MS.gene038380:CDS | 60.0% | |
| TCAGCTCACCTTCTCCCCTC+CGG | + | chr5.4:72964752-72964771 | MS.gene038380:CDS | 60.0% | |
| TGGATTGCTCGTTGCCGGAG+GGG | - | chr5.4:72964769-72964788 | None:intergenic | 60.0% | |
| ! | GTGCCATTGAGGTTGGCCAG+CGG | - | chr5.4:72964833-72964852 | None:intergenic | 60.0% |
| ! | GTGGATTGCTCGTTGCCGGA+GGG | - | chr5.4:72964770-72964789 | None:intergenic | 60.0% |
| !! | CGAGCAAGGGAGAGTACCGC+TGG | - | chr5.4:72964719-72964738 | None:intergenic | 65.0% |
| !! | GCAAGGGAGAGTACCGCTGG+TGG | - | chr5.4:72964716-72964735 | None:intergenic | 65.0% |
| !! | GGTGGATTGCTCGTTGCCGG+AGG | - | chr5.4:72964771-72964790 | None:intergenic | 65.0% |
| GCTCGTTGCCGGAGGGGAGA+AGG | - | chr5.4:72964763-72964782 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 72964695 | 72968916 | 72964695 | ID=MS.gene038380 |
| chr5.4 | mRNA | 72964695 | 72968916 | 72964695 | ID=MS.gene038380.t1;Parent=MS.gene038380 |
| chr5.4 | exon | 72964695 | 72964940 | 72964695 | ID=MS.gene038380.t1.exon1;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72964695 | 72964940 | 72964695 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72965763 | 72965943 | 72965763 | ID=MS.gene038380.t1.exon2;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72965763 | 72965943 | 72965763 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72966294 | 72966379 | 72966294 | ID=MS.gene038380.t1.exon3;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72966294 | 72966379 | 72966294 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72966844 | 72966948 | 72966844 | ID=MS.gene038380.t1.exon4;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72966844 | 72966948 | 72966844 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72967080 | 72967142 | 72967080 | ID=MS.gene038380.t1.exon5;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72967080 | 72967142 | 72967080 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72967300 | 72967409 | 72967300 | ID=MS.gene038380.t1.exon6;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72967300 | 72967409 | 72967300 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72967514 | 72967633 | 72967514 | ID=MS.gene038380.t1.exon7;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72967514 | 72967633 | 72967514 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72967708 | 72967783 | 72967708 | ID=MS.gene038380.t1.exon8;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72967708 | 72967783 | 72967708 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72967920 | 72967993 | 72967920 | ID=MS.gene038380.t1.exon9;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72967920 | 72967993 | 72967920 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72968146 | 72968266 | 72968146 | ID=MS.gene038380.t1.exon10;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72968146 | 72968266 | 72968146 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72968367 | 72968464 | 72968367 | ID=MS.gene038380.t1.exon11;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72968367 | 72968464 | 72968367 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72968568 | 72968691 | 72968568 | ID=MS.gene038380.t1.exon12;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72968568 | 72968691 | 72968568 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| chr5.4 | exon | 72968785 | 72968916 | 72968785 | ID=MS.gene038380.t1.exon13;Parent=MS.gene038380.t1 |
| chr5.4 | CDS | 72968785 | 72968916 | 72968785 | ID=cds.MS.gene038380.t1;Parent=MS.gene038380.t1 |
| Gene Sequence |
| Protein sequence |
