Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038383.t1 | XP_024638953.1 | 96.2 | 319 | 12 | 0 | 55 | 373 | 5 | 323 | 1.20E-175 | 625.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038383.t1 | Q4V3D9 | 56.2 | 345 | 108 | 2 | 72 | 373 | 30 | 374 | 6.9e-108 | 392.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038383.t1 | G7K3F5 | 96.2 | 319 | 12 | 0 | 55 | 373 | 5 | 323 | 8.5e-176 | 625.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene059296 | MS.gene038383 | PPI |
MS.gene038383 | MS.gene061292 | PPI |
MS.gene038383 | MS.gene034366 | PPI |
MS.gene038383 | MS.gene35719 | PPI |
MS.gene66625 | MS.gene038383 | PPI |
MS.gene038383 | MS.gene61630 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038383.t1 | MTR_5g091980 | 96.238 | 319 | 12 | 0 | 55 | 373 | 5 | 323 | 0.0 | 630 |
MS.gene038383.t1 | MTR_7g490350 | 69.231 | 364 | 65 | 3 | 57 | 373 | 6 | 369 | 8.96e-178 | 498 |
MS.gene038383.t1 | MTR_7g090300 | 68.132 | 364 | 69 | 3 | 57 | 373 | 6 | 369 | 1.31e-174 | 490 |
MS.gene038383.t1 | MTR_7g490330 | 74.455 | 321 | 78 | 2 | 56 | 373 | 6 | 325 | 1.23e-173 | 486 |
MS.gene038383.t1 | MTR_2g087780 | 48.580 | 352 | 127 | 7 | 73 | 373 | 47 | 395 | 1.32e-103 | 311 |
MS.gene038383.t1 | MTR_4g050190 | 46.439 | 351 | 135 | 7 | 73 | 373 | 44 | 391 | 1.76e-97 | 295 |
MS.gene038383.t1 | MTR_2g099030 | 45.171 | 321 | 125 | 5 | 98 | 368 | 82 | 401 | 2.66e-85 | 265 |
MS.gene038383.t1 | MTR_7g090320 | 42.169 | 332 | 138 | 5 | 95 | 372 | 55 | 386 | 1.66e-84 | 262 |
MS.gene038383.t1 | MTR_7g090310 | 40.922 | 347 | 151 | 6 | 80 | 372 | 39 | 385 | 2.59e-84 | 261 |
MS.gene038383.t1 | MTR_4g112670 | 40.059 | 337 | 170 | 4 | 57 | 371 | 8 | 334 | 1.06e-77 | 243 |
MS.gene038383.t1 | MTR_4g112630 | 41.869 | 289 | 155 | 5 | 97 | 372 | 37 | 325 | 2.67e-72 | 228 |
MS.gene038383.t1 | MTR_2g058450 | 44.300 | 307 | 150 | 4 | 88 | 373 | 30 | 336 | 2.90e-72 | 229 |
MS.gene038383.t1 | MTR_4g112650 | 40.614 | 293 | 152 | 4 | 97 | 367 | 37 | 329 | 1.44e-68 | 219 |
MS.gene038383.t1 | MTR_4g112620 | 37.241 | 290 | 138 | 4 | 97 | 372 | 41 | 300 | 1.31e-55 | 184 |
MS.gene038383.t1 | MTR_2g058410 | 39.130 | 230 | 122 | 3 | 159 | 370 | 1 | 230 | 1.41e-41 | 146 |
MS.gene038383.t1 | MTR_0003s0530 | 38.251 | 183 | 92 | 3 | 203 | 365 | 2 | 183 | 3.71e-35 | 128 |
MS.gene038383.t1 | MTR_8g074270 | 34.934 | 229 | 128 | 5 | 98 | 326 | 78 | 285 | 3.10e-32 | 125 |
MS.gene038383.t1 | MTR_8g074170 | 34.348 | 230 | 128 | 6 | 98 | 326 | 78 | 285 | 3.04e-31 | 122 |
MS.gene038383.t1 | MTR_8g074210 | 33.478 | 230 | 132 | 4 | 97 | 326 | 77 | 285 | 1.56e-29 | 117 |
MS.gene038383.t1 | MTR_4g112840 | 46.392 | 97 | 52 | 0 | 236 | 332 | 63 | 159 | 2.50e-24 | 98.2 |
MS.gene038383.t1 | MTR_2g042370 | 29.553 | 291 | 155 | 8 | 123 | 373 | 77 | 357 | 5.33e-23 | 99.0 |
MS.gene038383.t1 | MTR_2g042420 | 28.866 | 291 | 156 | 8 | 123 | 373 | 70 | 349 | 5.56e-22 | 96.3 |
MS.gene038383.t1 | MTR_2g042430 | 29.739 | 306 | 160 | 10 | 108 | 369 | 70 | 364 | 1.74e-21 | 95.1 |
MS.gene038383.t1 | MTR_1g075865 | 37.736 | 106 | 65 | 1 | 207 | 312 | 7 | 111 | 8.30e-19 | 82.4 |
MS.gene038383.t1 | MTR_5g037520 | 81.481 | 54 | 10 | 0 | 1 | 54 | 299 | 352 | 1.89e-18 | 86.7 |
MS.gene038383.t1 | MTR_2g058430 | 40.206 | 97 | 56 | 1 | 150 | 244 | 52 | 148 | 1.13e-14 | 73.9 |
MS.gene038383.t1 | MTR_8g074320 | 34.884 | 129 | 79 | 3 | 156 | 281 | 95 | 221 | 1.33e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038383.t1 | AT3G57030 | 56.069 | 346 | 109 | 2 | 71 | 373 | 29 | 374 | 1.28e-135 | 392 |
MS.gene038383.t1 | AT5G22020 | 47.507 | 341 | 128 | 5 | 81 | 373 | 58 | 395 | 5.84e-99 | 299 |
MS.gene038383.t1 | AT5G22020 | 47.507 | 341 | 128 | 5 | 81 | 373 | 58 | 395 | 5.84e-99 | 299 |
MS.gene038383.t1 | AT5G22020 | 47.507 | 341 | 128 | 5 | 81 | 373 | 58 | 395 | 5.84e-99 | 299 |
MS.gene038383.t1 | AT1G08470 | 46.000 | 350 | 135 | 7 | 74 | 373 | 44 | 389 | 1.82e-98 | 298 |
MS.gene038383.t1 | AT3G57010 | 44.687 | 367 | 150 | 9 | 52 | 370 | 6 | 367 | 3.65e-89 | 273 |
MS.gene038383.t1 | AT2G41290 | 43.631 | 369 | 152 | 7 | 60 | 373 | 9 | 376 | 2.85e-88 | 271 |
MS.gene038383.t1 | AT2G41300 | 46.278 | 309 | 120 | 4 | 105 | 370 | 85 | 390 | 6.84e-87 | 268 |
MS.gene038383.t1 | AT3G57020 | 43.785 | 354 | 149 | 7 | 63 | 370 | 17 | 366 | 6.86e-87 | 267 |
MS.gene038383.t1 | AT3G57020 | 42.090 | 354 | 141 | 7 | 63 | 370 | 17 | 352 | 1.19e-79 | 248 |
MS.gene038383.t1 | AT3G59530 | 48.302 | 265 | 124 | 4 | 71 | 323 | 53 | 316 | 1.07e-77 | 245 |
MS.gene038383.t1 | AT3G59530 | 48.302 | 265 | 124 | 4 | 71 | 323 | 53 | 316 | 1.07e-77 | 245 |
MS.gene038383.t1 | AT3G59530 | 48.302 | 265 | 124 | 4 | 71 | 323 | 53 | 316 | 1.07e-77 | 245 |
MS.gene038383.t1 | AT1G74020 | 41.297 | 293 | 152 | 6 | 98 | 373 | 38 | 327 | 3.92e-65 | 210 |
MS.gene038383.t1 | AT1G74010 | 39.932 | 293 | 155 | 7 | 98 | 373 | 37 | 325 | 4.42e-61 | 199 |
MS.gene038383.t1 | AT1G74000 | 38.776 | 294 | 160 | 7 | 97 | 373 | 39 | 329 | 2.02e-59 | 195 |
MS.gene038383.t1 | AT3G51430 | 31.783 | 258 | 156 | 6 | 74 | 330 | 45 | 283 | 1.06e-29 | 118 |
MS.gene038383.t1 | AT3G51430 | 30.435 | 276 | 171 | 7 | 74 | 347 | 45 | 301 | 1.24e-29 | 117 |
MS.gene038383.t1 | AT3G51440 | 32.031 | 256 | 151 | 7 | 99 | 350 | 70 | 306 | 2.75e-29 | 117 |
MS.gene038383.t1 | AT3G51450 | 31.330 | 233 | 140 | 6 | 99 | 330 | 70 | 283 | 1.24e-27 | 112 |
MS.gene038383.t1 | AT3G51420 | 29.452 | 292 | 165 | 9 | 54 | 323 | 4 | 276 | 5.22e-26 | 107 |
Find 92 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTCCTTTGAGAGATTT+TGG | 0.170650 | 5.4:+73005330 | MS.gene038383:CDS |
CTGTCCTTTGATCCAGAATT+TGG | 0.181227 | 5.4:-73006998 | None:intergenic |
ATTCTTCGACTTTGGCTTCA+TGG | 0.205561 | 5.4:+73010330 | MS.gene038383:CDS |
TAGGTGAAACTTCGACTTTC+CGG | 0.217649 | 5.4:+73010307 | MS.gene038383:CDS |
GAAATTCAGATGGGCAGTTT+TGG | 0.258450 | 5.4:+73010415 | MS.gene038383:CDS |
CTTTCCGGATTCTTCGACTT+TGG | 0.322440 | 5.4:+73010322 | MS.gene038383:CDS |
ATATTGACTTGGCCAGCATT+AGG | 0.334062 | 5.4:-73010354 | None:intergenic |
CTTCTTAGCGGAGACAAAAC+TGG | 0.347076 | 5.4:+73010177 | MS.gene038383:CDS |
TCCATTCGCACCAGAGTTAG+AGG | 0.369138 | 5.4:+73009569 | MS.gene038383:CDS |
CAGGTTATCCGGACAATATA+AGG | 0.377879 | 5.4:+73010391 | MS.gene038383:CDS |
TGCTGTTCTTCCAGGTTATC+CGG | 0.385672 | 5.4:+73010380 | MS.gene038383:CDS |
TATTGACTTGGCCAGCATTA+GGG | 0.387491 | 5.4:-73010353 | None:intergenic |
CCATCCGCCACGCCGGTGTA+TGG | 0.411524 | 5.4:-73007100 | None:intergenic |
CTCCATGTCACCGGAGCCGT+TGG | 0.420609 | 5.4:+73007040 | MS.gene038383:CDS |
TGGCTTCATGGCCCTAATGC+TGG | 0.424712 | 5.4:+73010342 | MS.gene038383:CDS |
GACGGTTTATTTCTTCTAGT+AGG | 0.425500 | 5.4:+73010288 | MS.gene038383:CDS |
GCTATAAAGTTGAGTGATGA+AGG | 0.432202 | 5.4:+73010456 | MS.gene038383:CDS |
TTGCTGTCACTAGTTCCAAT+AGG | 0.439270 | 5.4:+73007167 | MS.gene038383:CDS |
CTTATATTGTCCGGATAACC+TGG | 0.443834 | 5.4:-73010390 | None:intergenic |
CTCTGATTACTGATATGATT+AGG | 0.445203 | 5.4:+73005175 | None:intergenic |
CCAGAGTTAGAGGATATTTG+TGG | 0.459327 | 5.4:+73009579 | MS.gene038383:CDS |
GAATTTCTCCTTATATTGTC+CGG | 0.460285 | 5.4:-73010399 | None:intergenic |
ACTCTCCGGCCCAACGGCTC+CGG | 0.460954 | 5.4:-73007050 | None:intergenic |
TTGCTTAAACAAACACCGTT+GGG | 0.463178 | 5.4:-73010264 | None:intergenic |
TGAAGAGCCGTGCGAGGAAG+TGG | 0.469737 | 5.4:+73005299 | MS.gene038383:CDS |
TACATTGTTGATGCCTACCT+TGG | 0.478042 | 5.4:+73009645 | MS.gene038383:CDS |
GAAGTGAATGTCTTATTAAG+TGG | 0.483610 | 5.4:+73010231 | MS.gene038383:CDS |
TCCTCTAACTCTGGTGCGAA+TGG | 0.487071 | 5.4:-73009570 | None:intergenic |
GAAGCCAAAGTCGAAGAATC+CGG | 0.487945 | 5.4:-73010326 | None:intergenic |
AAACTATAAATACCAACATA+AGG | 0.492238 | 5.4:-73010573 | None:intergenic |
GCCCAACGGCTCCGGTGACA+TGG | 0.497514 | 5.4:-73007042 | None:intergenic |
AGAAGGATAACATCTCTCAT+AGG | 0.503698 | 5.4:-73005276 | None:intergenic |
TGGATCAAAGGACAGTCTCC+AGG | 0.505663 | 5.4:+73007006 | MS.gene038383:CDS |
CCACAAATATCCTCTAACTC+TGG | 0.512177 | 5.4:-73009579 | None:intergenic |
CTGCAGGTCCTACTACGTTA+AGG | 0.516853 | 5.4:-73009668 | None:intergenic |
TTTGCTTAAACAAACACCGT+TGG | 0.522071 | 5.4:-73010265 | None:intergenic |
TGAAGAGCCGTGTGAGAAAG+TGG | 0.522120 | 5.4:+73005245 | MS.gene038383:CDS |
GATATTTGTGGGAGGCCACT+AGG | 0.524182 | 5.4:+73009591 | MS.gene038383:CDS |
TCCATGTCACCGGAGCCGTT+GGG | 0.527613 | 5.4:+73007041 | MS.gene038383:CDS |
TCTCACACGGCTCTTCAAGA+AGG | 0.532683 | 5.4:-73005239 | None:intergenic |
TGTCACCGGAGCCGTTGGGC+CGG | 0.534102 | 5.4:+73007045 | MS.gene038383:CDS |
CTTAACGTAGTAGGACCTGC+AGG | 0.540126 | 5.4:+73009669 | MS.gene038383:CDS |
ACACCGGCGTGGCGGATGGA+CGG | 0.542691 | 5.4:+73007104 | MS.gene038383:CDS |
TTATCAAATCTTAGTCCTAG+TGG | 0.547763 | 5.4:-73009606 | None:intergenic |
CCATACACCGGCGTGGCGGA+TGG | 0.548384 | 5.4:+73007100 | MS.gene038383:CDS |
CGCTTCACTGACATATCTCA+TGG | 0.548468 | 5.4:-73010508 | None:intergenic |
TACCTTGGCCTTAACGTAGT+AGG | 0.551747 | 5.4:+73009660 | MS.gene038383:CDS |
ATGTCATTGTTGAAGCGAAA+GGG | 0.551830 | 5.4:-73009732 | None:intergenic |
CAGAGTTAGAGGATATTTGT+GGG | 0.555272 | 5.4:+73009580 | MS.gene038383:CDS |
AGGGGAAATATTAGAAATCG+TGG | 0.558229 | 5.4:+73010476 | MS.gene038383:CDS |
CCTCGCACGGCTCTTCAAGA+AGG | 0.558443 | 5.4:-73005293 | None:intergenic |
CATGGAGTAACCGATCAGCC+TGG | 0.564584 | 5.4:-73007024 | None:intergenic |
AAGTGAATGTCTTATTAAGT+GGG | 0.566171 | 5.4:+73010232 | MS.gene038383:CDS |
AGGACAGTCTCCAGGCTGAT+CGG | 0.569322 | 5.4:+73007014 | MS.gene038383:CDS |
CTTTCGCTTCAACAATGACA+TGG | 0.569375 | 5.4:+73009734 | MS.gene038383:CDS |
GGTTCCAAATTCTGGATCAA+AGG | 0.573208 | 5.4:+73006994 | MS.gene038383:CDS |
AAGTATGAAGGGGAGGAACG+TGG | 0.583448 | 5.4:+73007133 | MS.gene038383:CDS |
GGTGTTTGTTTAAGCAAAGA+CGG | 0.590239 | 5.4:+73010270 | MS.gene038383:CDS |
TATAAAGTTGAGTGATGAAG+GGG | 0.593424 | 5.4:+73010458 | MS.gene038383:CDS |
CAAGCACAGTCTATCAGAGA+AGG | 0.594605 | 5.4:+73009796 | MS.gene038383:CDS |
GTCCTACTACGTTAAGGCCA+AGG | 0.595729 | 5.4:-73009662 | None:intergenic |
AATCCGTCCATCCGCCACGC+CGG | 0.596699 | 5.4:-73007107 | None:intergenic |
AATATAAGGAGAAATTCAGA+TGG | 0.600334 | 5.4:+73010405 | MS.gene038383:CDS |
GACTTACCAAAATCTCTCAA+AGG | 0.605839 | 5.4:-73005336 | None:intergenic |
GAAATATTAGAAATCGTGGA+AGG | 0.606501 | 5.4:+73010480 | MS.gene038383:CDS |
AGTGGGCTTAATTATCCCAA+CGG | 0.610826 | 5.4:+73010249 | MS.gene038383:CDS |
ATGAAGGGGAGGAACGTGGT+TGG | 0.613290 | 5.4:+73007137 | MS.gene038383:CDS |
GATCGGTTACTCCATGTCAC+CGG | 0.620224 | 5.4:+73007031 | MS.gene038383:CDS |
AGCTTCTGTTGCTAACTGTG+TGG | 0.621050 | 5.4:-73009700 | None:intergenic |
TCGGTGTTAATGCCTTATGT+TGG | 0.621568 | 5.4:+73010561 | MS.gene038383:CDS |
GTGCAAGAAAAGTTGCAGCA+TGG | 0.622116 | 5.4:-73006940 | None:intergenic |
CTATAAAGTTGAGTGATGAA+GGG | 0.622219 | 5.4:+73010457 | MS.gene038383:CDS |
AACAAGACTCTCCGGCCCAA+CGG | 0.631984 | 5.4:-73007056 | None:intergenic |
CATGTCATTGTTGAAGCGAA+AGG | 0.635612 | 5.4:-73009733 | None:intergenic |
TCTGCTACCACTTCCTCGCA+CGG | 0.638474 | 5.4:-73005306 | None:intergenic |
CCTTCTTGAAGAGCCGTGCG+AGG | 0.639878 | 5.4:+73005293 | MS.gene038383:CDS |
TTAACGTAGTAGGACCTGCA+GGG | 0.641562 | 5.4:+73009670 | MS.gene038383:CDS |
CATGAGATATGTCAGTGAAG+CGG | 0.643807 | 5.4:+73010509 | MS.gene038383:CDS |
TTAGCGGAGACAAAACTGGA+AGG | 0.657390 | 5.4:+73010181 | MS.gene038383:CDS |
CAGTTAGCAACAGAAGCTGA+AGG | 0.659999 | 5.4:+73009705 | MS.gene038383:CDS |
ATATAAGGAGAAATTCAGAT+GGG | 0.667598 | 5.4:+73010406 | MS.gene038383:CDS |
TCTCCGCTAAGAAGTAAAAG+CGG | 0.672637 | 5.4:-73010168 | None:intergenic |
AATTTCAAGGTCGAACTGTG+TGG | 0.674077 | 5.4:+73009545 | MS.gene038383:intron |
TACTACGTTAAGGCCAAGGT+AGG | 0.676893 | 5.4:-73009658 | None:intergenic |
CACGGCGAAGGACCATACAC+CGG | 0.690062 | 5.4:+73007088 | MS.gene038383:CDS |
TAACGTAGTAGGACCTGCAG+GGG | 0.691917 | 5.4:+73009671 | MS.gene038383:CDS |
AGTTAGAGGATATTTGTGGG+AGG | 0.696868 | 5.4:+73009583 | MS.gene038383:CDS |
GATTAGGTCTAAAGAGACAG+CGG | 0.705530 | 5.4:+73005191 | MS.gene038383:CDS |
AGGACCATACACCGGCGTGG+CGG | 0.710184 | 5.4:+73007096 | MS.gene038383:CDS |
AACGTAGTAGGACCTGCAGG+GGG | 0.714485 | 5.4:+73009672 | MS.gene038383:CDS |
CGAAGGACCATACACCGGCG+TGG | 0.716462 | 5.4:+73007093 | MS.gene038383:CDS |
ACTGCTACCACTTTCTCACA+CGG | 0.741910 | 5.4:-73005252 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTAATATTTATAAATAT+GGG | - | chr5.4:73008367-73008386 | None:intergenic | 0.0% |
!! | AAAAAAAGTAAAGTAAAAAT+AGG | + | chr5.4:73005847-73005866 | MS.gene038383:intron | 10.0% |
!! | AGGTAAAAATAAAATAAAAA+TGG | + | chr5.4:73007432-73007451 | MS.gene038383:intron | 10.0% |
!! | ATTTCAAAAATATATTTGTT+AGG | - | chr5.4:73005882-73005901 | None:intergenic | 10.0% |
!! | TTTGAAAAAAATATATAAGA+AGG | - | chr5.4:73007867-73007886 | None:intergenic | 10.0% |
!!! | AATACTATTTTTTTATTTCA+AGG | - | chr5.4:73006394-73006413 | None:intergenic | 10.0% |
!!! | AATTTTATGAAAATTTATAG+GGG | - | chr5.4:73007933-73007952 | None:intergenic | 10.0% |
!!! | ACAATTTTATGAAAATTTAT+AGG | - | chr5.4:73007935-73007954 | None:intergenic | 10.0% |
!!! | ATTTTCATAAAATTGTAAAT+TGG | + | chr5.4:73007939-73007958 | MS.gene038383:intron | 10.0% |
!!! | CAATTTTATGAAAATTTATA+GGG | - | chr5.4:73007934-73007953 | None:intergenic | 10.0% |
!!! | CTTTCTTTTAATATAATTTT+AGG | + | chr5.4:73005746-73005765 | MS.gene038383:intron | 10.0% |
!!! | TAACAAATATATTTTTGAAA+TGG | + | chr5.4:73005881-73005900 | MS.gene038383:intron | 10.0% |
!!! | TTCTTTATAAATAATTTGTT+TGG | - | chr5.4:73008579-73008598 | None:intergenic | 10.0% |
!!! | TTTATAAATTCAAGATTTTT+GGG | - | chr5.4:73008071-73008090 | None:intergenic | 10.0% |
!!! | TTTGAAAATTTTGAAAAATA+TGG | - | chr5.4:73007906-73007925 | None:intergenic | 10.0% |
!!! | TTTGGAATTTTAAAAATTTT+AGG | - | chr5.4:73008435-73008454 | None:intergenic | 10.0% |
!!! | TTTTAATAATTTAAAGTTCT+AGG | - | chr5.4:73008187-73008206 | None:intergenic | 10.0% |
!!! | TTTTATAAATTCAAGATTTT+TGG | - | chr5.4:73008072-73008091 | None:intergenic | 10.0% |
!!! | TTTTCATAAAATTGTAAATT+GGG | + | chr5.4:73007940-73007959 | MS.gene038383:intron | 10.0% |
!! | AAATAAAATTGCATATTTAG+TGG | - | chr5.4:73006183-73006202 | None:intergenic | 15.0% |
!! | AATTTGAAAATTGAAAAGTA+AGG | - | chr5.4:73008493-73008512 | None:intergenic | 15.0% |
!! | ATTAAATTTGATCTATATGT+TGG | + | chr5.4:73010122-73010141 | MS.gene038383:intron | 15.0% |
!! | GTTAAATATTAATAACTCTA+AGG | + | chr5.4:73006858-73006877 | MS.gene038383:intron | 15.0% |
!! | TCAGTTATAAAAAAATTGTT+TGG | - | chr5.4:73008136-73008155 | None:intergenic | 15.0% |
!!! | AAAAGACCTTAATTTAAAAT+TGG | - | chr5.4:73006127-73006146 | None:intergenic | 15.0% |
!!! | AAAGATAAAAGTACAAAAAA+GGG | - | chr5.4:73005730-73005749 | None:intergenic | 15.0% |
!!! | AATGATTAATACTTTGTTTT+TGG | + | chr5.4:73009928-73009947 | MS.gene038383:intron | 15.0% |
!!! | AATTTCATTGTAATCATTTT+TGG | - | chr5.4:73008099-73008118 | None:intergenic | 15.0% |
!!! | ACTACTTTTGTAAAAAAAAA+AGG | - | chr5.4:73008519-73008538 | None:intergenic | 15.0% |
!!! | ATGATTAATACTTTGTTTTT+GGG | + | chr5.4:73009929-73009948 | MS.gene038383:intron | 15.0% |
!!! | ATTTAAAGCAAATAAGATTT+AGG | + | chr5.4:73006508-73006527 | MS.gene038383:intron | 15.0% |
!!! | TAAATATGCAATTTTATTTG+AGG | + | chr5.4:73006184-73006203 | MS.gene038383:intron | 15.0% |
!!! | TTATAAATTCAAGATTTTTG+GGG | - | chr5.4:73008070-73008089 | None:intergenic | 15.0% |
!!! | TTGTTATTTTTTAAAACTGA+GGG | - | chr5.4:73007966-73007985 | None:intergenic | 15.0% |
!!! | TTTGTTATTTTTTAAAACTG+AGG | - | chr5.4:73007967-73007986 | None:intergenic | 15.0% |
!!! | TTTTTGGTACAATTTAATTT+TGG | + | chr5.4:73007252-73007271 | MS.gene038383:intron | 15.0% |
!!! | TTTTTTAAGCAAAAGATTAT+GGG | - | chr5.4:73005799-73005818 | None:intergenic | 15.0% |
!!! | TTTTTTTAAGCAAAAGATTA+TGG | - | chr5.4:73005800-73005819 | None:intergenic | 15.0% |
!! | AAAATAAGCTAAAAATAGCT+TGG | + | chr5.4:73009061-73009080 | MS.gene038383:intron | 20.0% |
!! | AAACTATAAATACCAACATA+AGG | - | chr5.4:73010576-73010595 | None:intergenic | 20.0% |
!! | AAATAAGCTAAAAATAGCTT+GGG | + | chr5.4:73009062-73009081 | MS.gene038383:intron | 20.0% |
!! | AATTTAGATTATTAGTGACT+AGG | + | chr5.4:73007348-73007367 | MS.gene038383:intron | 20.0% |
!! | ACTTCTTGAATAATTTATAG+GGG | - | chr5.4:73008401-73008420 | None:intergenic | 20.0% |
!! | ATACCAATAAAGAAAGAATT+TGG | - | chr5.4:73007228-73007247 | None:intergenic | 20.0% |
!! | ATTTAGATTATTAGTGACTA+GGG | + | chr5.4:73007349-73007368 | MS.gene038383:intron | 20.0% |
!! | CACTTCTTGAATAATTTATA+GGG | - | chr5.4:73008402-73008421 | None:intergenic | 20.0% |
!! | CATTAAAATTTGACAAGTTA+GGG | - | chr5.4:73005377-73005396 | None:intergenic | 20.0% |
!! | CGAGAATAGTTTATAATTAT+GGG | + | chr5.4:73007569-73007588 | MS.gene038383:intron | 20.0% |
!! | CTAAGATTTGATAAGAAAAA+TGG | + | chr5.4:73009615-73009634 | MS.gene038383:CDS | 20.0% |
!! | GCAAATATTGAAAAAATTGA+GGG | - | chr5.4:73008462-73008481 | None:intergenic | 20.0% |
!! | TAATACGAGATCTAAAAATT+TGG | + | chr5.4:73006538-73006557 | MS.gene038383:intron | 20.0% |
!! | TACACAATCACTATAAAAAA+TGG | - | chr5.4:73010033-73010052 | None:intergenic | 20.0% |
!! | TCAAAAAAAATTGAGTTAAG+TGG | + | chr5.4:73008844-73008863 | MS.gene038383:intron | 20.0% |
!! | TCGAGAATAGTTTATAATTA+TGG | + | chr5.4:73007568-73007587 | MS.gene038383:intron | 20.0% |
!! | TGCAAATATTGAAAAAATTG+AGG | - | chr5.4:73008463-73008482 | None:intergenic | 20.0% |
!! | TGTAATTGAATCATTTGAAT+TGG | + | chr5.4:73008609-73008628 | MS.gene038383:intron | 20.0% |
!! | TGTATCAATAATGATGAAAT+TGG | - | chr5.4:73006059-73006078 | None:intergenic | 20.0% |
!! | TTTAGACCTACAAATATATT+AGG | - | chr5.4:73006103-73006122 | None:intergenic | 20.0% |
!! | TTTCCAAATTCTTTCTTTAT+TGG | + | chr5.4:73007222-73007241 | MS.gene038383:intron | 20.0% |
!!! | AAACATACTCTAAAAAGTTA+GGG | + | chr5.4:73008672-73008691 | MS.gene038383:intron | 20.0% |
!!! | AAGATAAAAGTACAAAAAAG+GGG | - | chr5.4:73005729-73005748 | None:intergenic | 20.0% |
!!! | ACTTAACTCAATTTTTTTTG+AGG | - | chr5.4:73008845-73008864 | None:intergenic | 20.0% |
!!! | ATATCGAGAAGTATATTTAA+GGG | - | chr5.4:73007547-73007566 | None:intergenic | 20.0% |
!!! | ATTTTTACCTAATAATCTAG+TGG | - | chr5.4:73007422-73007441 | None:intergenic | 20.0% |
!!! | ATTTTTCAAATTTTGCAAGT+TGG | + | chr5.4:73008338-73008357 | MS.gene038383:intron | 20.0% |
!!! | CTAAAGCCAATTTTAAATTA+AGG | + | chr5.4:73006118-73006137 | MS.gene038383:intron | 20.0% |
!!! | CTTTATTGGTATTCTTTTTT+TGG | + | chr5.4:73007236-73007255 | MS.gene038383:intron | 20.0% |
!!! | GAAAGATAAAAGTACAAAAA+AGG | - | chr5.4:73005731-73005750 | None:intergenic | 20.0% |
!!! | GAAATTTTGAAATTTGATAG+GGG | - | chr5.4:73008047-73008066 | None:intergenic | 20.0% |
!!! | GGAAATTTTGAAATTTGATA+GGG | - | chr5.4:73008048-73008067 | None:intergenic | 20.0% |
!!! | TAAACATACTCTAAAAAGTT+AGG | + | chr5.4:73008671-73008690 | MS.gene038383:intron | 20.0% |
!!! | TAAATAATTTGTTTGGATAG+AGG | - | chr5.4:73008572-73008591 | None:intergenic | 20.0% |
!!! | TATAAATTCAAGATTTTTGG+GGG | - | chr5.4:73008069-73008088 | None:intergenic | 20.0% |
!!! | TCTCAGTTTAATTTTTTTCA+TGG | + | chr5.4:73009386-73009405 | MS.gene038383:intron | 20.0% |
!!! | TTATTTCAAGGTTTTACAAT+TGG | - | chr5.4:73006382-73006401 | None:intergenic | 20.0% |
!!! | TTTCATTTAATCTTTTGTTG+TGG | - | chr5.4:73008982-73009001 | None:intergenic | 20.0% |
!!! | TTTGACTTTTTCTTTTTTCT+TGG | - | chr5.4:73005552-73005571 | None:intergenic | 20.0% |
!!! | TTTTAGATCTCGTATTAATT+AGG | - | chr5.4:73006535-73006554 | None:intergenic | 20.0% |
!!! | TTTTTAAGCAAAAGATTATG+GGG | - | chr5.4:73005798-73005817 | None:intergenic | 20.0% |
!!! | TTTTTCAAATTTTGCAAGTT+GGG | + | chr5.4:73008339-73008358 | MS.gene038383:intron | 20.0% |
!!! | TTTTTTCAATATTTGCAGTT+TGG | + | chr5.4:73008466-73008485 | MS.gene038383:intron | 20.0% |
! | AAAAAAGAAAAAGTCAAAGC+CGG | + | chr5.4:73005554-73005573 | MS.gene038383:intron | 25.0% |
! | AAAATAAAAATGGTGTGACA+TGG | + | chr5.4:73007442-73007461 | MS.gene038383:intron | 25.0% |
! | AACAATGAAATTTAGCTAGA+AGG | - | chr5.4:73008271-73008290 | None:intergenic | 25.0% |
! | AATATAAGGAGAAATTCAGA+TGG | + | chr5.4:73010405-73010424 | MS.gene038383:CDS | 25.0% |
! | ATACCAATAAAGGAAGAATT+TGG | - | chr5.4:73007293-73007312 | None:intergenic | 25.0% |
! | ATATAAGGAGAAATTCAGAT+GGG | + | chr5.4:73010406-73010425 | MS.gene038383:CDS | 25.0% |
! | CAAAAGAAGAATACCAATAA+AGG | - | chr5.4:73007303-73007322 | None:intergenic | 25.0% |
! | GAAAAAATTGAGGGTTAATT+TGG | - | chr5.4:73008453-73008472 | None:intergenic | 25.0% |
! | GCACTTCTTGAATAATTTAT+AGG | - | chr5.4:73008403-73008422 | None:intergenic | 25.0% |
! | GCATTAAAATTTGACAAGTT+AGG | - | chr5.4:73005378-73005397 | None:intergenic | 25.0% |
! | GTAATAGAAATATGCACATT+TGG | + | chr5.4:73007189-73007208 | MS.gene038383:intron | 25.0% |
! | TAGTCGAAAAAAAAAACTAC+TGG | + | chr5.4:73005908-73005927 | MS.gene038383:intron | 25.0% |
! | TATTGATACAATGAACAACA+AGG | + | chr5.4:73006069-73006088 | MS.gene038383:intron | 25.0% |
! | TCTAGCTAAATTTCATTGTT+TGG | + | chr5.4:73008271-73008290 | MS.gene038383:intron | 25.0% |
! | TTTCCAAATTCTTCCTTTAT+TGG | + | chr5.4:73007287-73007306 | MS.gene038383:intron | 25.0% |
!! | AAAATTTGAAGCAGACTAAA+CGG | - | chr5.4:73006653-73006672 | None:intergenic | 25.0% |
!! | AAAGATGGAAAACTTTTGAT+TGG | + | chr5.4:73010537-73010556 | MS.gene038383:CDS | 25.0% |
!! | AAGATAGCTTTTTGTTGATA+TGG | - | chr5.4:73006008-73006027 | None:intergenic | 25.0% |
!! | AAGTGAATGTCTTATTAAGT+GGG | + | chr5.4:73010232-73010251 | MS.gene038383:CDS | 25.0% |
!! | ATTCATGATATGCAAGTTTT+AGG | + | chr5.4:73005405-73005424 | MS.gene038383:intron | 25.0% |
!! | CTTTATTGGTATTCTTCTTT+TGG | + | chr5.4:73007301-73007320 | MS.gene038383:intron | 25.0% |
!! | GATATCGAGAAGTATATTTA+AGG | - | chr5.4:73007548-73007567 | None:intergenic | 25.0% |
!! | GATTAGTTGTATGAATTTCA+AGG | + | chr5.4:73009532-73009551 | MS.gene038383:intron | 25.0% |
!! | TATCGAGAAGTATATTTAAG+GGG | - | chr5.4:73007546-73007565 | None:intergenic | 25.0% |
!! | TGCATATTTCTATTACCTAT+TGG | - | chr5.4:73007185-73007204 | None:intergenic | 25.0% |
!! | TTAAGAAATTCATAGCTTGT+TGG | - | chr5.4:73005455-73005474 | None:intergenic | 25.0% |
!! | TTCATGATATGCAAGTTTTA+GGG | + | chr5.4:73005406-73005425 | MS.gene038383:intron | 25.0% |
!! | TTGACGATTTTCATTTACAT+TGG | + | chr5.4:73006737-73006756 | MS.gene038383:intron | 25.0% |
!! | TTTTCAATGAGCATCTATTA+AGG | - | chr5.4:73005984-73006003 | None:intergenic | 25.0% |
!!! | AAAGTTCTAGGAAATTCAAA+TGG | - | chr5.4:73008175-73008194 | None:intergenic | 25.0% |
!!! | AAAGTTGATGGTAGAAAATA+AGG | - | chr5.4:73009843-73009862 | None:intergenic | 25.0% |
!!! | ATTCCACGTTTTTTCAAATA+TGG | + | chr5.4:73006769-73006788 | MS.gene038383:intron | 25.0% |
!!! | GATGAAATTGGTTGTTTTAT+GGG | - | chr5.4:73006047-73006066 | None:intergenic | 25.0% |
!!! | GGGAAATTTTGAAATTTGAT+AGG | - | chr5.4:73008049-73008068 | None:intergenic | 25.0% |
!!! | TGATGAAATTGGTTGTTTTA+TGG | - | chr5.4:73006048-73006067 | None:intergenic | 25.0% |
!!! | TTTTGTTTAAAGTGCTAATG+AGG | - | chr5.4:73006302-73006321 | None:intergenic | 25.0% |
!!! | TTTTTTCAAATCTTGCAAGT+TGG | + | chr5.4:73007877-73007896 | MS.gene038383:intron | 25.0% |
AAAAATTGAGTTAAGTGGCA+TGG | + | chr5.4:73008849-73008868 | MS.gene038383:intron | 30.0% | |
AAACATACCCTTATTCTACA+AGG | + | chr5.4:73009171-73009190 | MS.gene038383:intron | 30.0% | |
AAAGAAAGAATTTGGAAACG+TGG | - | chr5.4:73007220-73007239 | None:intergenic | 30.0% | |
CAAAATGCAGATAAAGTTGA+TGG | - | chr5.4:73009855-73009874 | None:intergenic | 30.0% | |
CTATAAAGTTGAGTGATGAA+GGG | + | chr5.4:73010457-73010476 | MS.gene038383:CDS | 30.0% | |
CTCAATGAAATTTACCTAGA+AGG | - | chr5.4:73007730-73007749 | None:intergenic | 30.0% | |
CTGAAAACAGATAGTAGATT+AGG | - | chr5.4:73009282-73009301 | None:intergenic | 30.0% | |
GAAAAAGTCAATAACTCAAC+TGG | - | chr5.4:73006797-73006816 | None:intergenic | 30.0% | |
GAAATATTAGAAATCGTGGA+AGG | + | chr5.4:73010480-73010499 | MS.gene038383:CDS | 30.0% | |
GAAGTAAAGAGTAAAGTCAA+GGG | - | chr5.4:73007618-73007637 | None:intergenic | 30.0% | |
GAATTTCTCCTTATATTGTC+CGG | - | chr5.4:73010402-73010421 | None:intergenic | 30.0% | |
GAATTTCTTAAGTGATTCCT+GGG | + | chr5.4:73005464-73005483 | MS.gene038383:intron | 30.0% | |
GATCCATATTTGAAAAAACG+TGG | - | chr5.4:73006775-73006794 | None:intergenic | 30.0% | |
TACGAGATCTAAAAATTTGG+AGG | + | chr5.4:73006541-73006560 | MS.gene038383:intron | 30.0% | |
TATAAAGTTGAGTGATGAAG+GGG | + | chr5.4:73010458-73010477 | MS.gene038383:CDS | 30.0% | |
TGAAAAATCACACGCTTAAA+TGG | - | chr5.4:73008789-73008808 | None:intergenic | 30.0% | |
TGAAGTAAAGAGTAAAGTCA+AGG | - | chr5.4:73007619-73007638 | None:intergenic | 30.0% | |
TGAATTTCTTAAGTGATTCC+TGG | + | chr5.4:73005463-73005482 | MS.gene038383:intron | 30.0% | |
TGATCATCAATTTCAATTGG+TGG | + | chr5.4:73005524-73005543 | MS.gene038383:intron | 30.0% | |
TGATTGCAGTATAAAAGACT+TGG | + | chr5.4:73008879-73008898 | MS.gene038383:intron | 30.0% | |
TTATCAAATCTTAGTCCTAG+TGG | - | chr5.4:73009609-73009628 | None:intergenic | 30.0% | |
TTTGGATGATTGAATGTACT+GGG | + | chr5.4:73007676-73007695 | MS.gene038383:intron | 30.0% | |
! | ATGAAACCGTTTGAAACAAA+AGG | - | chr5.4:73009232-73009251 | None:intergenic | 30.0% |
! | ATTATTCAAGAAGTGCAAGT+TGG | + | chr5.4:73008407-73008426 | MS.gene038383:intron | 30.0% |
! | GAACAGCAAAAATATTGACT+TGG | - | chr5.4:73010368-73010387 | None:intergenic | 30.0% |
! | GAAGTGAATGTCTTATTAAG+TGG | + | chr5.4:73010231-73010250 | MS.gene038383:CDS | 30.0% |
! | TAAGACACTAAAAGTGTGTT+TGG | + | chr5.4:73007658-73007677 | MS.gene038383:intron | 30.0% |
! | TTTGAGGTAGATAGATGAAA+AGG | - | chr5.4:73008829-73008848 | None:intergenic | 30.0% |
! | TTTGTTTGAGTCTGATTTGA+AGG | - | chr5.4:73006620-73006639 | None:intergenic | 30.0% |
!! | AGAGCTTTGAAAAACAACTT+AGG | - | chr5.4:73009096-73009115 | None:intergenic | 30.0% |
!! | TCAAGTTTTCCTAGTTTTTG+TGG | - | chr5.4:73005957-73005976 | None:intergenic | 30.0% |
!! | TCTAAGATTGGATGTTTTGA+GGG | + | chr5.4:73008236-73008255 | MS.gene038383:intron | 30.0% |
!! | TCTCTACCTTTTGTTTCAAA+CGG | + | chr5.4:73009223-73009242 | MS.gene038383:intron | 30.0% |
!! | TGGAAAACTTTTGATTGGAT+CGG | + | chr5.4:73010542-73010561 | MS.gene038383:CDS | 30.0% |
!!! | AATATTTTTGCTGTTCTTCC+AGG | + | chr5.4:73010372-73010391 | MS.gene038383:CDS | 30.0% |
!!! | AGTCTTGTTTTTGATAGTCA+CGG | + | chr5.4:73007070-73007089 | MS.gene038383:CDS | 30.0% |
!!! | GTTATTGACTTTTTCTCAGT+AGG | + | chr5.4:73006802-73006821 | MS.gene038383:intron | 30.0% |
!!! | TCTTACTTTTTGCTGTTTCT+TGG | + | chr5.4:73005684-73005703 | MS.gene038383:intron | 30.0% |
AAAATCACACGCTTAAATGG+AGG | - | chr5.4:73008786-73008805 | None:intergenic | 35.0% | |
AAAGGAAGAATTTGGAAACG+TGG | - | chr5.4:73007285-73007304 | None:intergenic | 35.0% | |
AATGAGACACCACAAAAACT+AGG | + | chr5.4:73005945-73005964 | MS.gene038383:intron | 35.0% | |
ACCCCTCAAAATTTGCAAAT+TGG | + | chr5.4:73008021-73008040 | MS.gene038383:intron | 35.0% | |
AGAAGGATAACATCTCTCAT+AGG | - | chr5.4:73005279-73005298 | None:intergenic | 35.0% | |
AGCTTCACCACTAGATTATT+AGG | + | chr5.4:73007412-73007431 | MS.gene038383:intron | 35.0% | |
AGGGGAAATATTAGAAATCG+TGG | + | chr5.4:73010476-73010495 | MS.gene038383:CDS | 35.0% | |
ATGTCATTGTTGAAGCGAAA+GGG | - | chr5.4:73009735-73009754 | None:intergenic | 35.0% | |
ATTATTAGTGACTAGGGAGT+AGG | + | chr5.4:73007355-73007374 | MS.gene038383:intron | 35.0% | |
ATTGTTTGAGAATGCAAGCA+AGG | + | chr5.4:73009253-73009272 | MS.gene038383:intron | 35.0% | |
ATTTGAAGGTGGTTGTTTAG+GGG | - | chr5.4:73006606-73006625 | None:intergenic | 35.0% | |
CAGAGTTAGAGGATATTTGT+GGG | + | chr5.4:73009580-73009599 | MS.gene038383:CDS | 35.0% | |
CTATCAAAAACAAGACTCTC+CGG | - | chr5.4:73007067-73007086 | None:intergenic | 35.0% | |
CTCAAAACATCCAATCTTAG+AGG | - | chr5.4:73008237-73008256 | None:intergenic | 35.0% | |
GAAGGGATGATAATTGTGTT+TGG | - | chr5.4:73006692-73006711 | None:intergenic | 35.0% | |
GAATGAAGAGATCGATGATT+TGG | + | chr5.4:73005500-73005519 | MS.gene038383:intron | 35.0% | |
GAATTTCGCTATGTTTAGCT+TGG | - | chr5.4:73007808-73007827 | None:intergenic | 35.0% | |
GACTTACCAAAATCTCTCAA+AGG | - | chr5.4:73005339-73005358 | None:intergenic | 35.0% | |
GAGAGAATTCAAATCCTTCT+AGG | + | chr5.4:73007713-73007732 | MS.gene038383:intron | 35.0% | |
GATCGGCCTAATATATTTGT+AGG | + | chr5.4:73006094-73006113 | MS.gene038383:intron | 35.0% | |
GATTTGAAGGTGGTTGTTTA+GGG | - | chr5.4:73006607-73006626 | None:intergenic | 35.0% | |
GCTATAAAGTTGAGTGATGA+AGG | + | chr5.4:73010456-73010475 | MS.gene038383:CDS | 35.0% | |
GGCTGATCATCAATTTCAAT+TGG | + | chr5.4:73005521-73005540 | MS.gene038383:intron | 35.0% | |
GGTGTTTGTTTAAGCAAAGA+CGG | + | chr5.4:73010270-73010289 | MS.gene038383:CDS | 35.0% | |
GTCACTTGATCTATAACTTG+TGG | - | chr5.4:73008706-73008725 | None:intergenic | 35.0% | |
GTTTGGATGATTGAATGTAC+TGG | + | chr5.4:73007675-73007694 | MS.gene038383:intron | 35.0% | |
TAAAAATGGTGTGACATGGT+TGG | + | chr5.4:73007446-73007465 | MS.gene038383:intron | 35.0% | |
TAAAAGACTTGGACGTTGTT+TGG | + | chr5.4:73008890-73008909 | MS.gene038383:intron | 35.0% | |
TCATGCCAAAATTGCTAGAT+CGG | + | chr5.4:73008728-73008747 | MS.gene038383:intron | 35.0% | |
TGATTTGAAGGTGGTTGTTT+AGG | - | chr5.4:73006608-73006627 | None:intergenic | 35.0% | |
TGTTCACTTGAGTTCAGATA+GGG | + | chr5.4:73009964-73009983 | MS.gene038383:intron | 35.0% | |
TTATTAGTGACTAGGGAGTA+GGG | + | chr5.4:73007356-73007375 | MS.gene038383:intron | 35.0% | |
TTGCTTAAACAAACACCGTT+GGG | - | chr5.4:73010267-73010286 | None:intergenic | 35.0% | |
TTGCTTGCCTTGTAGAATAA+GGG | - | chr5.4:73009181-73009200 | None:intergenic | 35.0% | |
TTGTTCACTTGAGTTCAGAT+AGG | + | chr5.4:73009963-73009982 | MS.gene038383:intron | 35.0% | |
TTTGCTTAAACAAACACCGT+TGG | - | chr5.4:73010268-73010287 | None:intergenic | 35.0% | |
TTTGCTTGCCTTGTAGAATA+AGG | - | chr5.4:73009182-73009201 | None:intergenic | 35.0% | |
! | AAATTCAGATGGGCAGTTTT+GGG | + | chr5.4:73010416-73010435 | MS.gene038383:CDS | 35.0% |
! | AACCTTGTTGTACATATCCT+CGG | - | chr5.4:73009441-73009460 | None:intergenic | 35.0% |
! | AATGTCCGATCTAGCAATTT+TGG | - | chr5.4:73008736-73008755 | None:intergenic | 35.0% |
! | CATCTTTGCACTCTTTTCAT+CGG | + | chr5.4:73006973-73006992 | MS.gene038383:CDS | 35.0% |
! | CTCTAAAAAGTTAGGGTCAA+TGG | + | chr5.4:73008679-73008698 | MS.gene038383:intron | 35.0% |
! | GACGGTTTATTTCTTCTAGT+AGG | + | chr5.4:73010288-73010307 | MS.gene038383:CDS | 35.0% |
! | GCCAATTTGCAAATTTTGAG+GGG | - | chr5.4:73008025-73008044 | None:intergenic | 35.0% |
! | GGCCAATTTGCAAATTTTGA+GGG | - | chr5.4:73008026-73008045 | None:intergenic | 35.0% |
! | TTTTGTGGTGTCTCATTTTC+TGG | - | chr5.4:73005942-73005961 | None:intergenic | 35.0% |
!! | ACATGGTTGGTAGATGTTAA+GGG | + | chr5.4:73007459-73007478 | MS.gene038383:intron | 35.0% |
!! | AGATTTTGGTAAGTCCATAG+TGG | + | chr5.4:73005344-73005363 | MS.gene038383:intron | 35.0% |
!! | ATTCCGCTTTTACTTCTTAG+CGG | + | chr5.4:73010165-73010184 | MS.gene038383:CDS | 35.0% |
!! | CATTCAAACACCTCTAAGAT+TGG | + | chr5.4:73008224-73008243 | MS.gene038383:intron | 35.0% |
!! | GCAAATTTTGAGGGGTTAAA+TGG | - | chr5.4:73008017-73008036 | None:intergenic | 35.0% |
!! | TCACTTCCTTTGAGAGATTT+TGG | + | chr5.4:73005330-73005349 | MS.gene038383:CDS | 35.0% |
!!! | AATAGCTACTTTTTTGTCCG+AGG | + | chr5.4:73009421-73009440 | MS.gene038383:intron | 35.0% |
!!! | ACGGATTTTGAAGTATGAAG+GGG | + | chr5.4:73007123-73007142 | MS.gene038383:CDS | 35.0% |
!!! | ACTTTTTGCTGTTTCTTGGA+GGG | + | chr5.4:73005688-73005707 | MS.gene038383:intron | 35.0% |
!!! | CTCTAAGATTGGATGTTTTG+AGG | + | chr5.4:73008235-73008254 | MS.gene038383:intron | 35.0% |
!!! | GACGGATTTTGAAGTATGAA+GGG | + | chr5.4:73007122-73007141 | MS.gene038383:CDS | 35.0% |
!!! | TAATTTTAGGGTGAAACAGC+AGG | + | chr5.4:73005759-73005778 | MS.gene038383:intron | 35.0% |
!!! | TACTTTTTGCTGTTTCTTGG+AGG | + | chr5.4:73005687-73005706 | MS.gene038383:intron | 35.0% |
!!! | TGTTGGTCACTTTTGTTTGT+AGG | + | chr5.4:73010139-73010158 | MS.gene038383:intron | 35.0% |
!!! | TTTTCATCGGTTCCAAATTC+TGG | + | chr5.4:73006986-73007005 | MS.gene038383:CDS | 35.0% |
AAAAGATTATGGGGAGCAGA+GGG | - | chr5.4:73005789-73005808 | None:intergenic | 40.0% | |
AAACCCTAGCGATACTGTTT+GGG | - | chr5.4:73009119-73009138 | None:intergenic | 40.0% | |
AATTTCAAGGTCGAACTGTG+TGG | + | chr5.4:73009545-73009564 | MS.gene038383:intron | 40.0% | |
AGAGCGAACTAAAAGCAAGA+GGG | - | chr5.4:73005653-73005672 | None:intergenic | 40.0% | |
AGTGAAGCGGATGAAAAAGA+TGG | + | chr5.4:73010522-73010541 | MS.gene038383:CDS | 40.0% | |
AGTTAGAGGATATTTGTGGG+AGG | + | chr5.4:73009583-73009602 | MS.gene038383:CDS | 40.0% | |
ATCGCTAGGGTTTATGTAAG+TGG | + | chr5.4:73009126-73009145 | MS.gene038383:intron | 40.0% | |
CAATGAACAACAAGGTCGAT+CGG | + | chr5.4:73006077-73006096 | MS.gene038383:intron | 40.0% | |
CAGGTTATCCGGACAATATA+AGG | + | chr5.4:73010391-73010410 | MS.gene038383:CDS | 40.0% | |
CATGAGATATGTCAGTGAAG+CGG | + | chr5.4:73010509-73010528 | MS.gene038383:CDS | 40.0% | |
CATGTCATTGTTGAAGCGAA+AGG | - | chr5.4:73009736-73009755 | None:intergenic | 40.0% | |
CCACAAATATCCTCTAACTC+TGG | - | chr5.4:73009582-73009601 | None:intergenic | 40.0% | |
CCAGAGTTAGAGGATATTTG+TGG | + | chr5.4:73009579-73009598 | MS.gene038383:CDS | 40.0% | |
CTATCCCTTAAAAACTAGCG+AGG | - | chr5.4:73005626-73005645 | None:intergenic | 40.0% | |
CTGTCCTTTGATCCAGAATT+TGG | - | chr5.4:73007001-73007020 | None:intergenic | 40.0% | |
CTTATATTGTCCGGATAACC+TGG | - | chr5.4:73010393-73010412 | None:intergenic | 40.0% | |
CTTTCGCTTCAACAATGACA+TGG | + | chr5.4:73009734-73009753 | MS.gene038383:CDS | 40.0% | |
GAAAATCGTCAAGAGCTTGT+AGG | - | chr5.4:73006729-73006748 | None:intergenic | 40.0% | |
GATTAGGTCTAAAGAGACAG+CGG | + | chr5.4:73005191-73005210 | MS.gene038383:CDS | 40.0% | |
GGAGTAGGGAGACTTAAATT+GGG | + | chr5.4:73007370-73007389 | MS.gene038383:intron | 40.0% | |
GGAGTCTCTTAAGCATATGT+GGG | + | chr5.4:73007480-73007499 | MS.gene038383:intron | 40.0% | |
GGTTCCAAATTCTGGATCAA+AGG | + | chr5.4:73006994-73007013 | MS.gene038383:CDS | 40.0% | |
TAAACCCTAGCGATACTGTT+TGG | - | chr5.4:73009120-73009139 | None:intergenic | 40.0% | |
TAACATGCATGCATTCACGA+GGG | - | chr5.4:73006842-73006861 | None:intergenic | 40.0% | |
TACATTGTTGATGCCTACCT+TGG | + | chr5.4:73009645-73009664 | MS.gene038383:CDS | 40.0% | |
TAGAGCGAACTAAAAGCAAG+AGG | - | chr5.4:73005654-73005673 | None:intergenic | 40.0% | |
TAGGTGAAACTTCGACTTTC+CGG | + | chr5.4:73010307-73010326 | MS.gene038383:CDS | 40.0% | |
TCTCCGCTAAGAAGTAAAAG+CGG | - | chr5.4:73010171-73010190 | None:intergenic | 40.0% | |
TTAACATGCATGCATTCACG+AGG | - | chr5.4:73006843-73006862 | None:intergenic | 40.0% | |
TTGCTGTCACTAGTTCCAAT+AGG | + | chr5.4:73007167-73007186 | MS.gene038383:CDS | 40.0% | |
! | AGTGGGCTTAATTATCCCAA+CGG | + | chr5.4:73010249-73010268 | MS.gene038383:CDS | 40.0% |
! | ATTCTTCGACTTTGGCTTCA+TGG | + | chr5.4:73010330-73010349 | MS.gene038383:CDS | 40.0% |
! | ATTTGAAGCAGACTAAACGG+TGG | - | chr5.4:73006650-73006669 | None:intergenic | 40.0% |
! | GAAATTCAGATGGGCAGTTT+TGG | + | chr5.4:73010415-73010434 | MS.gene038383:CDS | 40.0% |
! | GGGCCAATTTGCAAATTTTG+AGG | - | chr5.4:73008027-73008046 | None:intergenic | 40.0% |
! | GTTTGAGTCTGATTTGAAGG+TGG | - | chr5.4:73006617-73006636 | None:intergenic | 40.0% |
!! | ATATTGACTTGGCCAGCATT+AGG | - | chr5.4:73010357-73010376 | None:intergenic | 40.0% |
!! | ATTCTGAGACATATTAGCCC+AGG | - | chr5.4:73005484-73005503 | None:intergenic | 40.0% |
!! | GACATGGTTGGTAGATGTTA+AGG | + | chr5.4:73007458-73007477 | MS.gene038383:intron | 40.0% |
!! | TATTGACTTGGCCAGCATTA+GGG | - | chr5.4:73010356-73010375 | None:intergenic | 40.0% |
!! | TCGGTGTTAATGCCTTATGT+TGG | + | chr5.4:73010561-73010580 | MS.gene038383:CDS | 40.0% |
!!! | CGCTAGTTTTTAAGGGATAG+TGG | + | chr5.4:73005626-73005645 | MS.gene038383:intron | 40.0% |
!!! | GATTTTGAAGTATGAAGGGG+AGG | + | chr5.4:73007126-73007145 | MS.gene038383:CDS | 40.0% |
!!! | GGACGGATTTTGAAGTATGA+AGG | + | chr5.4:73007121-73007140 | MS.gene038383:CDS | 40.0% |
AAAGATTATGGGGAGCAGAG+GGG | - | chr5.4:73005788-73005807 | None:intergenic | 45.0% | |
AAAGTCAAAGCCGGTGACTA+AGG | + | chr5.4:73005563-73005582 | MS.gene038383:intron | 45.0% | |
AATCGTCAAGAGCTTGTAGG+TGG | - | chr5.4:73006726-73006745 | None:intergenic | 45.0% | |
ACTGCTACCACTTTCTCACA+CGG | - | chr5.4:73005255-73005274 | None:intergenic | 45.0% | |
AGCTTCTGTTGCTAACTGTG+TGG | - | chr5.4:73009703-73009722 | None:intergenic | 45.0% | |
AGGTGGTGCATGATTGAGAA+GGG | - | chr5.4:73006709-73006728 | None:intergenic | 45.0% | |
AGTGGTCTGCCACTAAAACA+CGG | - | chr5.4:73006575-73006594 | None:intergenic | 45.0% | |
CAAAAGATTATGGGGAGCAG+AGG | - | chr5.4:73005790-73005809 | None:intergenic | 45.0% | |
CAAGCACAGTCTATCAGAGA+AGG | + | chr5.4:73009796-73009815 | MS.gene038383:CDS | 45.0% | |
CAGTTAGCAACAGAAGCTGA+AGG | + | chr5.4:73009705-73009724 | MS.gene038383:CDS | 45.0% | |
CGCTTCACTGACATATCTCA+TGG | - | chr5.4:73010511-73010530 | None:intergenic | 45.0% | |
CTTCTTAGCGGAGACAAAAC+TGG | + | chr5.4:73010177-73010196 | MS.gene038383:CDS | 45.0% | |
CTTGAGTTCAGATAGGGAGA+TGG | + | chr5.4:73009970-73009989 | MS.gene038383:intron | 45.0% | |
CTTTCCGGATTCTTCGACTT+TGG | + | chr5.4:73010322-73010341 | MS.gene038383:CDS | 45.0% | |
GAAGCCAAAGTCGAAGAATC+CGG | - | chr5.4:73010329-73010348 | None:intergenic | 45.0% | |
GCTAGATCGGACATTGTAAC+CGG | + | chr5.4:73008741-73008760 | MS.gene038383:intron | 45.0% | |
GGGAGTAGGGAGACTTAAAT+TGG | + | chr5.4:73007369-73007388 | MS.gene038383:intron | 45.0% | |
GGGAGTCTCTTAAGCATATG+TGG | + | chr5.4:73007479-73007498 | MS.gene038383:intron | 45.0% | |
GTCCGAGGATATGTACAACA+AGG | + | chr5.4:73009436-73009455 | MS.gene038383:intron | 45.0% | |
GTGCAAGAAAAGTTGCAGCA+TGG | - | chr5.4:73006943-73006962 | None:intergenic | 45.0% | |
GTTGTGCACGCGTAGTTAAA+TGG | - | chr5.4:73006459-73006478 | None:intergenic | 45.0% | |
TACTACGTTAAGGCCAAGGT+AGG | - | chr5.4:73009661-73009680 | None:intergenic | 45.0% | |
TAGGTGGTGCATGATTGAGA+AGG | - | chr5.4:73006710-73006729 | None:intergenic | 45.0% | |
TCTCCCAAACAGTATCGCTA+GGG | + | chr5.4:73009113-73009132 | MS.gene038383:intron | 45.0% | |
TGCTGTTCTTCCAGGTTATC+CGG | + | chr5.4:73010380-73010399 | MS.gene038383:CDS | 45.0% | |
TTAACGTAGTAGGACCTGCA+GGG | + | chr5.4:73009670-73009689 | MS.gene038383:CDS | 45.0% | |
TTAGCGGAGACAAAACTGGA+AGG | + | chr5.4:73010181-73010200 | MS.gene038383:CDS | 45.0% | |
! | GCCACTAAAACACGGGTTTT+AGG | - | chr5.4:73006567-73006586 | None:intergenic | 45.0% |
! | TTAAAAACTAGCGAGGCGCT+CGG | - | chr5.4:73005619-73005638 | None:intergenic | 45.0% |
!! | ACTTTTTCTCAGTAGGACCC+TGG | + | chr5.4:73006809-73006828 | MS.gene038383:intron | 45.0% |
!! | ATAGCTTGTTGGACTGCAGT+AGG | - | chr5.4:73005444-73005463 | None:intergenic | 45.0% |
!! | GCCTAAAACCCGTGTTTTAG+TGG | + | chr5.4:73006563-73006582 | MS.gene038383:intron | 45.0% |
!! | GTTTTTGATAGTCACGGCGA+AGG | + | chr5.4:73007076-73007095 | MS.gene038383:CDS | 45.0% |
!! | TACCTTGGCCTTAACGTAGT+AGG | + | chr5.4:73009660-73009679 | MS.gene038383:CDS | 45.0% |
!! | TGCTGTTTCTTGGAGGGTTT+CGG | + | chr5.4:73005694-73005713 | MS.gene038383:intron | 45.0% |
!! | TGGTGTCTCATTTTCTGGTC+TGG | - | chr5.4:73005937-73005956 | None:intergenic | 45.0% |
!!! | AGCGCCTCGCTAGTTTTTAA+GGG | + | chr5.4:73005619-73005638 | MS.gene038383:intron | 45.0% |
!! | AAAAAAAAATATTAATTGTA+AGG | - | chr5.4:73010073-73010092 | None:intergenic | 5.0% |
!! | AAAATGATTTATAATTTATA+TGG | - | chr5.4:73009016-73009035 | None:intergenic | 5.0% |
!!! | CATTTTAATATTTATAAATA+TGG | - | chr5.4:73008368-73008387 | None:intergenic | 5.0% |
!!! | TTTCTTTTAATATAATTTTA+GGG | + | chr5.4:73005747-73005766 | MS.gene038383:intron | 5.0% |
AACCGGAGTTTCAACCCCAA+CGG | + | chr5.4:73008758-73008777 | MS.gene038383:intron | 50.0% | |
AAGTATGAAGGGGAGGAACG+TGG | + | chr5.4:73007133-73007152 | MS.gene038383:CDS | 50.0% | |
CGGTGACTAAGGCTAGCAAA+GGG | + | chr5.4:73005574-73005593 | MS.gene038383:intron | 50.0% | |
CTCTCCCAAACAGTATCGCT+AGG | + | chr5.4:73009112-73009131 | MS.gene038383:intron | 50.0% | |
CTGCAGGTCCTACTACGTTA+AGG | - | chr5.4:73009671-73009690 | None:intergenic | 50.0% | |
CTTAAATGGAGGAGCCGTTG+GGG | - | chr5.4:73008775-73008794 | None:intergenic | 50.0% | |
CTTAACGTAGTAGGACCTGC+AGG | + | chr5.4:73009669-73009688 | MS.gene038383:CDS | 50.0% | |
GAGTTCAGATAGGGAGATGG+TGG | + | chr5.4:73009973-73009992 | MS.gene038383:intron | 50.0% | |
GATATTTGTGGGAGGCCACT+AGG | + | chr5.4:73009591-73009610 | MS.gene038383:CDS | 50.0% | |
GATCGGTTACTCCATGTCAC+CGG | + | chr5.4:73007031-73007050 | MS.gene038383:CDS | 50.0% | |
GCTTAAATGGAGGAGCCGTT+GGG | - | chr5.4:73008776-73008795 | None:intergenic | 50.0% | |
GGCTAGCAAAGGGTTCAAGT+TGG | + | chr5.4:73005584-73005603 | MS.gene038383:intron | 50.0% | |
GTCCTACTACGTTAAGGCCA+AGG | - | chr5.4:73009665-73009684 | None:intergenic | 50.0% | |
GTGGTCTGCCACTAAAACAC+GGG | - | chr5.4:73006574-73006593 | None:intergenic | 50.0% | |
GTTAGGGTTCGTCACCACTA+TGG | - | chr5.4:73005361-73005380 | None:intergenic | 50.0% | |
TAACGTAGTAGGACCTGCAG+GGG | + | chr5.4:73009671-73009690 | MS.gene038383:CDS | 50.0% | |
TCCATTCGCACCAGAGTTAG+AGG | + | chr5.4:73009569-73009588 | MS.gene038383:CDS | 50.0% | |
TCCTCTAACTCTGGTGCGAA+TGG | - | chr5.4:73009573-73009592 | None:intergenic | 50.0% | |
TCTCACACGGCTCTTCAAGA+AGG | - | chr5.4:73005242-73005261 | None:intergenic | 50.0% | |
TGAAGAGCCGTGTGAGAAAG+TGG | + | chr5.4:73005245-73005264 | MS.gene038383:CDS | 50.0% | |
TGGATCAAAGGACAGTCTCC+AGG | + | chr5.4:73007006-73007025 | MS.gene038383:CDS | 50.0% | |
! | ATAGGGAGATGGTGGCTTTG+AGG | + | chr5.4:73009981-73010000 | MS.gene038383:intron | 50.0% |
! | TTTTCTCAGTAGGACCCTGG+TGG | + | chr5.4:73006812-73006831 | MS.gene038383:intron | 50.0% |
!! | CCTTTGCTAGCCTTAGTCAC+CGG | - | chr5.4:73005576-73005595 | None:intergenic | 50.0% |
!!! | GAGCGCCTCGCTAGTTTTTA+AGG | + | chr5.4:73005618-73005637 | MS.gene038383:intron | 50.0% |
AACAAGACTCTCCGGCCCAA+CGG | - | chr5.4:73007059-73007078 | None:intergenic | 55.0% | |
AACGTAGTAGGACCTGCAGG+GGG | + | chr5.4:73009672-73009691 | MS.gene038383:CDS | 55.0% | |
AGCCGTTGGGGTTGAAACTC+CGG | - | chr5.4:73008763-73008782 | None:intergenic | 55.0% | |
AGGACAGTCTCCAGGCTGAT+CGG | + | chr5.4:73007014-73007033 | MS.gene038383:CDS | 55.0% | |
ATGAAGGGGAGGAACGTGGT+TGG | + | chr5.4:73007137-73007156 | MS.gene038383:CDS | 55.0% | |
CATGGAGTAACCGATCAGCC+TGG | - | chr5.4:73007027-73007046 | None:intergenic | 55.0% | |
CCGGTGACTAAGGCTAGCAA+AGG | + | chr5.4:73005573-73005592 | MS.gene038383:intron | 55.0% | |
CGCTTAAATGGAGGAGCCGT+TGG | - | chr5.4:73008777-73008796 | None:intergenic | 55.0% | |
GAAGGTGGTTGTTTAGGGGC+TGG | - | chr5.4:73006602-73006621 | None:intergenic | 55.0% | |
TCTGCTACCACTTCCTCGCA+CGG | - | chr5.4:73005309-73005328 | None:intergenic | 55.0% | |
TGGCTTCATGGCCCTAATGC+TGG | + | chr5.4:73010342-73010361 | MS.gene038383:CDS | 55.0% | |
!! | TGTTTAGGGGCTGGTCGAAG+TGG | - | chr5.4:73006593-73006612 | None:intergenic | 55.0% |
AGTAGGACCTGCAGGGGGTT+TGG | + | chr5.4:73009677-73009696 | MS.gene038383:CDS | 60.0% | |
CACGGCGAAGGACCATACAC+CGG | + | chr5.4:73007088-73007107 | MS.gene038383:CDS | 60.0% | |
CCTCGCACGGCTCTTCAAGA+AGG | - | chr5.4:73005296-73005315 | None:intergenic | 60.0% | |
CCTTCTTGAAGAGCCGTGCG+AGG | + | chr5.4:73005293-73005312 | MS.gene038383:CDS | 60.0% | |
TCCATGTCACCGGAGCCGTT+GGG | + | chr5.4:73007041-73007060 | MS.gene038383:CDS | 60.0% | |
TGAAGAGCCGTGCGAGGAAG+TGG | + | chr5.4:73005299-73005318 | MS.gene038383:CDS | 60.0% | |
! | AAACTAGCGAGGCGCTCGGT+TGG | - | chr5.4:73005615-73005634 | None:intergenic | 60.0% |
!! | ATTCACGAGGGTGCTCCACC+AGG | - | chr5.4:73006830-73006849 | None:intergenic | 60.0% |
!! | TTCACGAGGGTGCTCCACCA+GGG | - | chr5.4:73006829-73006848 | None:intergenic | 60.0% |
AATCCGTCCATCCGCCACGC+CGG | - | chr5.4:73007110-73007129 | None:intergenic | 65.0% | |
AGGACCATACACCGGCGTGG+CGG | + | chr5.4:73007096-73007115 | MS.gene038383:CDS | 65.0% | |
CGAAGGACCATACACCGGCG+TGG | + | chr5.4:73007093-73007112 | MS.gene038383:CDS | 65.0% | |
CTCCATGTCACCGGAGCCGT+TGG | + | chr5.4:73007040-73007059 | MS.gene038383:CDS | 65.0% | |
TGTGTGGCCAAACCCCCTGC+AGG | - | chr5.4:73009687-73009706 | None:intergenic | 65.0% | |
ACTCTCCGGCCCAACGGCTC+CGG | - | chr5.4:73007053-73007072 | None:intergenic | 70.0% | |
CCATCCGCCACGCCGGTGTA+TGG | - | chr5.4:73007103-73007122 | None:intergenic | 70.0% | |
GCCCAACGGCTCCGGTGACA+TGG | - | chr5.4:73007045-73007064 | None:intergenic | 70.0% | |
TGTCACCGGAGCCGTTGGGC+CGG | + | chr5.4:73007045-73007064 | MS.gene038383:CDS | 70.0% | |
! | CCATACACCGGCGTGGCGGA+TGG | + | chr5.4:73007100-73007119 | MS.gene038383:CDS | 70.0% |
!! | ACACCGGCGTGGCGGATGGA+CGG | + | chr5.4:73007104-73007123 | MS.gene038383:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 73005189 | 73010599 | 73005189 | ID=MS.gene038383 |
chr5.4 | mRNA | 73005189 | 73010599 | 73005189 | ID=MS.gene038383.t1;Parent=MS.gene038383 |
chr5.4 | exon | 73005189 | 73005351 | 73005189 | ID=MS.gene038383.t1.exon1;Parent=MS.gene038383.t1 |
chr5.4 | CDS | 73005189 | 73005351 | 73005189 | ID=cds.MS.gene038383.t1;Parent=MS.gene038383.t1 |
chr5.4 | exon | 73006933 | 73007188 | 73006933 | ID=MS.gene038383.t1.exon2;Parent=MS.gene038383.t1 |
chr5.4 | CDS | 73006933 | 73007188 | 73006933 | ID=cds.MS.gene038383.t1;Parent=MS.gene038383.t1 |
chr5.4 | exon | 73009554 | 73009817 | 73009554 | ID=MS.gene038383.t1.exon3;Parent=MS.gene038383.t1 |
chr5.4 | CDS | 73009554 | 73009817 | 73009554 | ID=cds.MS.gene038383.t1;Parent=MS.gene038383.t1 |
chr5.4 | exon | 73010161 | 73010599 | 73010161 | ID=MS.gene038383.t1.exon4;Parent=MS.gene038383.t1 |
chr5.4 | CDS | 73010161 | 73010599 | 73010161 | ID=cds.MS.gene038383.t1;Parent=MS.gene038383.t1 |
Gene Sequence |
Protein sequence |