Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038794.t1 | XP_003609152.1 | 99 | 203 | 2 | 0 | 5 | 207 | 49 | 251 | 3.80E-107 | 397.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038794.t1 | Q9FN50 | 77.2 | 206 | 47 | 0 | 2 | 207 | 53 | 258 | 5.7e-88 | 325.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038794.t1 | G7JT27 | 99.0 | 203 | 2 | 0 | 5 | 207 | 49 | 251 | 2.7e-107 | 397.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene012085 | MS.gene038794 | PPI |
MS.gene89638 | MS.gene038794 | PPI |
MS.gene017661 | MS.gene038794 | PPI |
MS.gene76469 | MS.gene038794 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038794.t1 | MTR_4g112540 | 99.015 | 203 | 2 | 0 | 5 | 207 | 49 | 251 | 8.32e-147 | 408 |
MS.gene038794.t1 | MTR_8g076220 | 39.320 | 206 | 121 | 3 | 3 | 206 | 78 | 281 | 8.63e-45 | 150 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038794.t1 | AT5G23040 | 77.184 | 206 | 47 | 0 | 2 | 207 | 53 | 258 | 1.32e-117 | 335 |
MS.gene038794.t1 | AT5G23040 | 77.184 | 206 | 47 | 0 | 2 | 207 | 53 | 258 | 1.32e-117 | 335 |
MS.gene038794.t1 | AT3G51140 | 35.644 | 202 | 120 | 3 | 10 | 207 | 83 | 278 | 2.12e-42 | 144 |
MS.gene038794.t1 | AT3G51140 | 40.523 | 153 | 81 | 3 | 10 | 158 | 83 | 229 | 9.64e-35 | 123 |
MS.gene038794.t1 | AT2G20920 | 27.895 | 190 | 117 | 4 | 2 | 172 | 62 | 250 | 9.81e-12 | 63.2 |
Find 57 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACACTAACTCTGGGGAATTT+TGG | 0.086811 | 8.3:-14665991 | None:intergenic |
ATGCTTCTGAAGAAGAAATT+TGG | 0.165582 | 8.3:+14666049 | MS.gene038794:CDS |
CAGCAACATTGTTGGAATAT+TGG | 0.219376 | 8.3:-14667362 | None:intergenic |
TTGGCTAGAGCGTTCGTTAT+TGG | 0.284075 | 8.3:+14667210 | MS.gene038794:CDS |
GCTACAGGTGGCAATCTCTT+TGG | 0.284234 | 8.3:+14667149 | MS.gene038794:intron |
ATTGTTTCTCTTTGCCTTCA+TGG | 0.298571 | 8.3:+14666296 | MS.gene038794:CDS |
GTTGCCACTTCACTTGAAAA+AGG | 0.300132 | 8.3:-14667452 | None:intergenic |
AGCAACATTGTTGGAATATT+GGG | 0.319394 | 8.3:-14667361 | None:intergenic |
TGGCTAGAGCGTTCGTTATT+GGG | 0.329181 | 8.3:+14667211 | MS.gene038794:CDS |
TGCTTCTGAAGAAGAAATTT+GGG | 0.335100 | 8.3:+14666050 | MS.gene038794:CDS |
ATGGGTCTCTGGTTCATTGC+TGG | 0.351564 | 8.3:+14667336 | MS.gene038794:CDS |
AATTCCCCAGAGTTAGTGTT+TGG | 0.356525 | 8.3:+14665995 | MS.gene038794:CDS |
CTTGTGGCTGGATGGGTCTC+TGG | 0.370387 | 8.3:+14667325 | MS.gene038794:CDS |
ATTATGAATTCTGCTGAAAC+TGG | 0.386488 | 8.3:+14666330 | MS.gene038794:CDS |
AAATGAAAAGACAAAGAGTT+TGG | 0.389051 | 8.3:+14667191 | MS.gene038794:CDS |
TCTTTGCCTTCATGGGTGGC+TGG | 0.389646 | 8.3:+14666304 | MS.gene038794:CDS |
AGGTTTGGAGCTCTTGTGGC+TGG | 0.394881 | 8.3:+14667313 | MS.gene038794:intron |
TTGTTTCTCTTTGCCTTCAT+GGG | 0.395534 | 8.3:+14666297 | MS.gene038794:CDS |
TTGGAGCTCTTGTGGCTGGA+TGG | 0.399967 | 8.3:+14667317 | MS.gene038794:CDS |
TGGAGCTCTTGTGGCTGGAT+GGG | 0.401053 | 8.3:+14667318 | MS.gene038794:CDS |
CCAACGATGTTAAGAGTTCA+AGG | 0.419073 | 8.3:-14667399 | None:intergenic |
CAATGTTGCTGCGCCCAACT+TGG | 0.429282 | 8.3:+14667374 | MS.gene038794:CDS |
ATTCCCCAGAGTTAGTGTTT+GGG | 0.449394 | 8.3:+14665996 | MS.gene038794:CDS |
TGGGATCCTTACCGACGCCT+TGG | 0.464510 | 8.3:+14666015 | MS.gene038794:CDS |
AGGATCCCAAACACTAACTC+TGG | 0.471905 | 8.3:-14666001 | None:intergenic |
GTTGGGCGCAGCAACATTGT+TGG | 0.472629 | 8.3:-14667370 | None:intergenic |
CTGAGGATAATTTCAGTTGG+TGG | 0.473276 | 8.3:-14666270 | None:intergenic |
TTTCTGTTGCAACAGTATGC+TGG | 0.473842 | 8.3:+14666084 | MS.gene038794:CDS |
AGAGTTCAAGGCTCCAAGTT+GGG | 0.476403 | 8.3:-14667387 | None:intergenic |
TCAAATCAAACCTGAAAAGC+AGG | 0.503028 | 8.3:-14666354 | None:intergenic |
TTATAGGTTTGGAGCTCTTG+TGG | 0.505560 | 8.3:+14667309 | MS.gene038794:intron |
TTTCTTCTTCAGAAGCATCA+TGG | 0.518629 | 8.3:-14666044 | None:intergenic |
TTTCTCTTTGCCTTCATGGG+TGG | 0.529189 | 8.3:+14666300 | MS.gene038794:CDS |
GGATCCCAAACACTAACTCT+GGG | 0.535496 | 8.3:-14666000 | None:intergenic |
AATGCTCCAGCCACCCATGA+AGG | 0.539964 | 8.3:-14666310 | None:intergenic |
CCTTGAACTCTTAACATCGT+TGG | 0.541069 | 8.3:+14667399 | MS.gene038794:CDS |
CTTCTGAGGATAATTTCAGT+TGG | 0.554844 | 8.3:-14666273 | None:intergenic |
AGCACATTCTTGACCCATGG+TGG | 0.555534 | 8.3:-14666231 | None:intergenic |
CACATTCTTGACCCATGGTG+GGG | 0.558838 | 8.3:-14666229 | None:intergenic |
ACCCAGCTAGTTACCAGAAG+AGG | 0.559585 | 8.3:-14665780 | None:intergenic |
AAGAGTTCAAGGCTCCAAGT+TGG | 0.565418 | 8.3:-14667388 | None:intergenic |
TTTAGCACATTCTTGACCCA+TGG | 0.565764 | 8.3:-14666234 | None:intergenic |
CTAACACCAAGGCGTCGGTA+AGG | 0.567021 | 8.3:-14666021 | None:intergenic |
GAGGAGCGTAGAATCAATAG+AGG | 0.575040 | 8.3:+14666113 | MS.gene038794:CDS |
GCACATTCTTGACCCATGGT+GGG | 0.578738 | 8.3:-14666230 | None:intergenic |
TGATGGCTAGTTTCGTACAA+AGG | 0.587486 | 8.3:+14666154 | MS.gene038794:CDS |
AGTTGAGGAGTCCCCACCAT+GGG | 0.606304 | 8.3:+14666218 | MS.gene038794:CDS |
CAAGTTGAAGAAGAAAGTTG+AGG | 0.611137 | 8.3:+14666203 | MS.gene038794:CDS |
CAAAGAGAAACAATCTTCTG+AGG | 0.616936 | 8.3:-14666287 | None:intergenic |
CATGGCTAACACCAAGGCGT+CGG | 0.618805 | 8.3:-14666026 | None:intergenic |
TGGCTAGTTTCGTACAAAGG+AGG | 0.635562 | 8.3:+14666157 | MS.gene038794:CDS |
AACAGTATGCTGGACATGAG+AGG | 0.646098 | 8.3:+14666094 | MS.gene038794:CDS |
GCTTCTGAAGAAGAAATTTG+GGG | 0.649344 | 8.3:+14666051 | MS.gene038794:CDS |
AAGCATCATGGCTAACACCA+AGG | 0.688521 | 8.3:-14666032 | None:intergenic |
AAGTTGAGGAGTCCCCACCA+TGG | 0.688946 | 8.3:+14666217 | MS.gene038794:CDS |
CTTCTGAAGAAGAAATTTGG+GGG | 0.702966 | 8.3:+14666052 | MS.gene038794:CDS |
GATCCCAAACACTAACTCTG+GGG | 0.736381 | 8.3:-14665999 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAATTTATTTATTCCATA+AGG | - | chr8.3:14665933-14665952 | None:intergenic | 10.0% |
!! | AAATGGTTAACAAAAATTAA+AGG | - | chr8.3:14667270-14667289 | None:intergenic | 15.0% |
!! | ACATTATTGAAAAGATAATT+TGG | + | chr8.3:14667066-14667085 | MS.gene038794:intron | 15.0% |
!! | AATTTATTTATTCCATAAGG+TGG | - | chr8.3:14665930-14665949 | None:intergenic | 20.0% |
!! | ATATAGACTTGTATAAACAA+AGG | - | chr8.3:14666924-14666943 | None:intergenic | 20.0% |
!! | GTTAGAACAATTTAATCTTA+AGG | + | chr8.3:14667014-14667033 | MS.gene038794:intron | 20.0% |
!! | TCCAAAATTGTAGAAAAAAA+TGG | + | chr8.3:14666509-14666528 | MS.gene038794:intron | 20.0% |
!!! | ACCATTTTTTTCTACAATTT+TGG | - | chr8.3:14666513-14666532 | None:intergenic | 20.0% |
!!! | ATTTTTTTCTACAATTTTGG+AGG | - | chr8.3:14666510-14666529 | None:intergenic | 20.0% |
!!! | TGCTTTTGAAAAAATATTGA+TGG | + | chr8.3:14666137-14666156 | MS.gene038794:CDS | 20.0% |
! | AAAACTTTATCCAAAAAGAC+TGG | - | chr8.3:14666888-14666907 | None:intergenic | 25.0% |
! | AAATGAAAAGACAAAGAGTT+TGG | + | chr8.3:14667191-14667210 | MS.gene038794:CDS | 25.0% |
! | AATATTAATTTCTCAAACCG+TGG | + | chr8.3:14666552-14666571 | MS.gene038794:intron | 25.0% |
! | AATGTTAAGTCATCTACAAA+GGG | + | chr8.3:14666601-14666620 | MS.gene038794:intron | 25.0% |
! | AGGATATAATAGTGAATAGA+CGG | - | chr8.3:14666951-14666970 | None:intergenic | 25.0% |
! | ATATTAATTTCTCAAACCGT+GGG | + | chr8.3:14666553-14666572 | MS.gene038794:intron | 25.0% |
! | ATTCACTATTATATCCTTCA+AGG | + | chr8.3:14666954-14666973 | MS.gene038794:intron | 25.0% |
! | CAAAAATCATCTTAAAGCTA+AGG | - | chr8.3:14665818-14665837 | None:intergenic | 25.0% |
! | CTATCTTTGGTTATCAATAA+AGG | + | chr8.3:14666721-14666740 | MS.gene038794:intron | 25.0% |
!! | AACTCTTTGTCTTTTCATTT+AGG | - | chr8.3:14667191-14667210 | None:intergenic | 25.0% |
!!! | CTTAGCTTTAAGATGATTTT+TGG | + | chr8.3:14665816-14665835 | MS.gene038794:intron | 25.0% |
!!! | GTTTACTTTTTCTTGTTCAT+TGG | + | chr8.3:14667424-14667443 | MS.gene038794:CDS | 25.0% |
!!! | TGTCAATATGCAATTTTTTC+AGG | - | chr8.3:14667116-14667135 | None:intergenic | 25.0% |
AAAAATGGTATATGTTCGCT+TGG | + | chr8.3:14666524-14666543 | MS.gene038794:intron | 30.0% | |
AACCTATAATTGTGCAGTAA+AGG | - | chr8.3:14667298-14667317 | None:intergenic | 30.0% | |
AGATGACTTAACATTCAGTA+TGG | - | chr8.3:14666596-14666615 | None:intergenic | 30.0% | |
AGCAACATTGTTGGAATATT+GGG | - | chr8.3:14667364-14667383 | None:intergenic | 30.0% | |
ATTATGAATTCTGCTGAAAC+TGG | + | chr8.3:14666330-14666349 | MS.gene038794:CDS | 30.0% | |
GAATGTTAAGTCATCTACAA+AGG | + | chr8.3:14666600-14666619 | MS.gene038794:intron | 30.0% | |
GTGCAGTAAAGGAAAATAAA+TGG | - | chr8.3:14667287-14667306 | None:intergenic | 30.0% | |
TTACTGCACAATTATAGGTT+TGG | + | chr8.3:14667298-14667317 | MS.gene038794:intron | 30.0% | |
TTATATCCTTCAAGGCATAA+TGG | + | chr8.3:14666962-14666981 | MS.gene038794:intron | 30.0% | |
TTCCTTTACTGCACAATTAT+AGG | + | chr8.3:14667293-14667312 | MS.gene038794:intron | 30.0% | |
! | ATGCTTCTGAAGAAGAAATT+TGG | + | chr8.3:14666049-14666068 | MS.gene038794:CDS | 30.0% |
! | TGCTTCTGAAGAAGAAATTT+GGG | + | chr8.3:14666050-14666069 | MS.gene038794:CDS | 30.0% |
!! | TCACTAAAGTCTTATTAGCA+AGG | - | chr8.3:14666698-14666717 | None:intergenic | 30.0% |
!! | TTGGAGGAATAATTTTCAAG+TGG | - | chr8.3:14666494-14666513 | None:intergenic | 30.0% |
AATATGCCATTATGCCTTGA+AGG | - | chr8.3:14666971-14666990 | None:intergenic | 35.0% | |
ACTTTAGTGACTGCTATCTT+TGG | + | chr8.3:14666708-14666727 | MS.gene038794:intron | 35.0% | |
ATTCTTTCTTCCTAGGCTTT+AGG | + | chr8.3:14666629-14666648 | MS.gene038794:intron | 35.0% | |
CAAAGAGAAACAATCTTCTG+AGG | - | chr8.3:14666290-14666309 | None:intergenic | 35.0% | |
CAAGGCATAATGGCATATTA+AGG | + | chr8.3:14666972-14666991 | MS.gene038794:intron | 35.0% | |
CAGCAACATTGTTGGAATAT+TGG | - | chr8.3:14667365-14667384 | None:intergenic | 35.0% | |
CATAATGGCATATTAAGGAC+AGG | + | chr8.3:14666977-14666996 | MS.gene038794:intron | 35.0% | |
GGTGAATATTCTTTCTTCCT+AGG | + | chr8.3:14666622-14666641 | MS.gene038794:intron | 35.0% | |
TCAAATCAAACCTGAAAAGC+AGG | - | chr8.3:14666357-14666376 | None:intergenic | 35.0% | |
TCTTAAGGTTCACCTATTCT+TGG | + | chr8.3:14667029-14667048 | MS.gene038794:intron | 35.0% | |
TGACAAATGACAAGTACATC+AGG | - | chr8.3:14666658-14666677 | None:intergenic | 35.0% | |
TGGGACATTACCTGTATAAA+AGG | - | chr8.3:14665974-14665993 | None:intergenic | 35.0% | |
! | ATACGTGCATCCTTTTATAC+AGG | + | chr8.3:14665961-14665980 | MS.gene038794:intron | 35.0% |
! | ATTGTTTCTCTTTGCCTTCA+TGG | + | chr8.3:14666296-14666315 | MS.gene038794:CDS | 35.0% |
! | CAAGTTGAAGAAGAAAGTTG+AGG | + | chr8.3:14666203-14666222 | MS.gene038794:CDS | 35.0% |
! | CTTCTGAAGAAGAAATTTGG+GGG | + | chr8.3:14666052-14666071 | MS.gene038794:CDS | 35.0% |
! | CTTCTGAGGATAATTTCAGT+TGG | - | chr8.3:14666276-14666295 | None:intergenic | 35.0% |
! | GCTTCTGAAGAAGAAATTTG+GGG | + | chr8.3:14666051-14666070 | MS.gene038794:CDS | 35.0% |
! | GTCTTCTATTTTCCACCTTA+TGG | + | chr8.3:14665915-14665934 | MS.gene038794:intron | 35.0% |
! | TTCAAGTCTTCCAGTCTTTT+TGG | + | chr8.3:14666875-14666894 | MS.gene038794:intron | 35.0% |
! | TTGTTTCTCTTTGCCTTCAT+GGG | + | chr8.3:14666297-14666316 | MS.gene038794:CDS | 35.0% |
!! | TTTCTTCTTCAGAAGCATCA+TGG | - | chr8.3:14666047-14666066 | None:intergenic | 35.0% |
!!! | ATGCAATTTTTTCAGGCACA+TGG | - | chr8.3:14667109-14667128 | None:intergenic | 35.0% |
AATTCCCCAGAGTTAGTGTT+TGG | + | chr8.3:14665995-14666014 | MS.gene038794:CDS | 40.0% | |
ATTCCCCAGAGTTAGTGTTT+GGG | + | chr8.3:14665996-14666015 | MS.gene038794:CDS | 40.0% | |
CAGTACTATTCTCTTGCTAC+AGG | + | chr8.3:14667134-14667153 | MS.gene038794:intron | 40.0% | |
CCAACGATGTTAAGAGTTCA+AGG | - | chr8.3:14667402-14667421 | None:intergenic | 40.0% | |
CCTTGAACTCTTAACATCGT+TGG | + | chr8.3:14667399-14667418 | MS.gene038794:CDS | 40.0% | |
CTGAGGATAATTTCAGTTGG+TGG | - | chr8.3:14666273-14666292 | None:intergenic | 40.0% | |
GAACAACTGTAATTCACCCA+CGG | - | chr8.3:14666572-14666591 | None:intergenic | 40.0% | |
TAAGGACAGGTGAATGTGTT+TGG | + | chr8.3:14666990-14667009 | MS.gene038794:intron | 40.0% | |
TACTATTCTCTTGCTACAGG+TGG | + | chr8.3:14667137-14667156 | MS.gene038794:intron | 40.0% | |
TCTTGTGGCTATCAGACTTT+CGG | + | chr8.3:14666783-14666802 | MS.gene038794:intron | 40.0% | |
TTTAGCACATTCTTGACCCA+TGG | - | chr8.3:14666237-14666256 | None:intergenic | 40.0% | |
TTTCTGTTGCAACAGTATGC+TGG | + | chr8.3:14666084-14666103 | MS.gene038794:CDS | 40.0% | |
! | TTATAGGTTTGGAGCTCTTG+TGG | + | chr8.3:14667309-14667328 | MS.gene038794:intron | 40.0% |
!! | ACACTAACTCTGGGGAATTT+TGG | - | chr8.3:14665994-14666013 | None:intergenic | 40.0% |
!! | CACTAACTCTGGGGAATTTT+GGG | - | chr8.3:14665993-14666012 | None:intergenic | 40.0% |
!! | TGATGGCTAGTTTCGTACAA+AGG | + | chr8.3:14666154-14666173 | MS.gene038794:CDS | 40.0% |
AACAGTATGCTGGACATGAG+AGG | + | chr8.3:14666094-14666113 | MS.gene038794:CDS | 45.0% | |
AAGAGTTCAAGGCTCCAAGT+TGG | - | chr8.3:14667391-14667410 | None:intergenic | 45.0% | |
AAGCATCATGGCTAACACCA+AGG | - | chr8.3:14666035-14666054 | None:intergenic | 45.0% | |
AGAGTTCAAGGCTCCAAGTT+GGG | - | chr8.3:14667390-14667409 | None:intergenic | 45.0% | |
AGGATCCCAAACACTAACTC+TGG | - | chr8.3:14666004-14666023 | None:intergenic | 45.0% | |
CTATTCTTGGAGTCACGTCA+GGG | + | chr8.3:14667042-14667061 | MS.gene038794:intron | 45.0% | |
GATCCCAAACACTAACTCTG+GGG | - | chr8.3:14666002-14666021 | None:intergenic | 45.0% | |
GGATCCCAAACACTAACTCT+GGG | - | chr8.3:14666003-14666022 | None:intergenic | 45.0% | |
TATTCTTGGAGTCACGTCAG+GGG | + | chr8.3:14667043-14667062 | MS.gene038794:intron | 45.0% | |
TCCTCTTCTGGTAACTAGCT+GGG | + | chr8.3:14665779-14665798 | MS.gene038794:intron | 45.0% | |
TTTCAGAATAGCCACTGAGC+TGG | + | chr8.3:14666755-14666774 | MS.gene038794:intron | 45.0% | |
TTTCTCTTTGCCTTCATGGG+TGG | + | chr8.3:14666300-14666319 | MS.gene038794:CDS | 45.0% | |
! | GAGGAGCGTAGAATCAATAG+AGG | + | chr8.3:14666113-14666132 | MS.gene038794:CDS | 45.0% |
! | TGGCTAGAGCGTTCGTTATT+GGG | + | chr8.3:14667211-14667230 | MS.gene038794:CDS | 45.0% |
! | TTGGCTAGAGCGTTCGTTAT+TGG | + | chr8.3:14667210-14667229 | MS.gene038794:CDS | 45.0% |
!! | TGAAACTGGACCTGCTTTTC+AGG | + | chr8.3:14666344-14666363 | MS.gene038794:CDS | 45.0% |
!! | TGGCTAGTTTCGTACAAAGG+AGG | + | chr8.3:14666157-14666176 | MS.gene038794:CDS | 45.0% |
!! | ATAAAATAATAAAGAAATAT+AGG | + | chr8.3:14666454-14666473 | MS.gene038794:intron | 5.0% |
!! | TTTATATATAAAATACAATT+TGG | - | chr8.3:14666439-14666458 | None:intergenic | 5.0% |
ACAAGACATGACCAGCTCAG+TGG | - | chr8.3:14666769-14666788 | None:intergenic | 50.0% | |
ACCCAGCTAGTTACCAGAAG+AGG | - | chr8.3:14665783-14665802 | None:intergenic | 50.0% | |
ACTGAGCTGGTCATGTCTTG+TGG | + | chr8.3:14666768-14666787 | MS.gene038794:intron | 50.0% | |
AGCACATTCTTGACCCATGG+TGG | - | chr8.3:14666234-14666253 | None:intergenic | 50.0% | |
AGCGTTCGTTATTGGGTGAG+TGG | + | chr8.3:14667218-14667237 | MS.gene038794:intron | 50.0% | |
CACATTCTTGACCCATGGTG+GGG | - | chr8.3:14666232-14666251 | None:intergenic | 50.0% | |
CATCAGGCATCCTAAAGCCT+AGG | - | chr8.3:14666642-14666661 | None:intergenic | 50.0% | |
CCTATTCTTGGAGTCACGTC+AGG | + | chr8.3:14667041-14667060 | MS.gene038794:intron | 50.0% | |
CCTGACGTGACTCCAAGAAT+AGG | - | chr8.3:14667044-14667063 | None:intergenic | 50.0% | |
GCACATTCTTGACCCATGGT+GGG | - | chr8.3:14666233-14666252 | None:intergenic | 50.0% | |
GCTACAGGTGGCAATCTCTT+TGG | + | chr8.3:14667149-14667168 | MS.gene038794:intron | 50.0% | |
GTCCTCTTCTGGTAACTAGC+TGG | + | chr8.3:14665778-14665797 | MS.gene038794:intron | 50.0% | |
TCTTCTGGTAACTAGCTGGG+TGG | + | chr8.3:14665782-14665801 | MS.gene038794:intron | 50.0% | |
TGGTAACTAGCTGGGTGGTT+TGG | + | chr8.3:14665787-14665806 | MS.gene038794:intron | 50.0% | |
! | ATGGGTCTCTGGTTCATTGC+TGG | + | chr8.3:14667336-14667355 | MS.gene038794:CDS | 50.0% |
AAGTTGAGGAGTCCCCACCA+TGG | + | chr8.3:14666217-14666236 | MS.gene038794:CDS | 55.0% | |
AATGCTCCAGCCACCCATGA+AGG | - | chr8.3:14666313-14666332 | None:intergenic | 55.0% | |
AGTTGAGGAGTCCCCACCAT+GGG | + | chr8.3:14666218-14666237 | MS.gene038794:CDS | 55.0% | |
CAATGTTGCTGCGCCCAACT+TGG | + | chr8.3:14667374-14667393 | MS.gene038794:CDS | 55.0% | |
CATGGCTAACACCAAGGCGT+CGG | - | chr8.3:14666029-14666048 | None:intergenic | 55.0% | |
GTTGGGCGCAGCAACATTGT+TGG | - | chr8.3:14667373-14667392 | None:intergenic | 55.0% | |
TCTTTGCCTTCATGGGTGGC+TGG | + | chr8.3:14666304-14666323 | MS.gene038794:CDS | 55.0% | |
TGGAGCTCTTGTGGCTGGAT+GGG | + | chr8.3:14667318-14667337 | MS.gene038794:CDS | 55.0% | |
TTGGAGCTCTTGTGGCTGGA+TGG | + | chr8.3:14667317-14667336 | MS.gene038794:CDS | 55.0% | |
! | AGGTTTGGAGCTCTTGTGGC+TGG | + | chr8.3:14667313-14667332 | MS.gene038794:intron | 55.0% |
!! | CTAACACCAAGGCGTCGGTA+AGG | - | chr8.3:14666024-14666043 | None:intergenic | 55.0% |
CTTGTGGCTGGATGGGTCTC+TGG | + | chr8.3:14667325-14667344 | MS.gene038794:CDS | 60.0% | |
TGGGATCCTTACCGACGCCT+TGG | + | chr8.3:14666015-14666034 | MS.gene038794:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 14665776 | 14667465 | 14665776 | ID=MS.gene038794 |
chr8.3 | mRNA | 14665776 | 14667465 | 14665776 | ID=MS.gene038794.t1;Parent=MS.gene038794 |
chr8.3 | exon | 14665776 | 14665788 | 14665776 | ID=MS.gene038794.t1.exon1;Parent=MS.gene038794.t1 |
chr8.3 | CDS | 14665776 | 14665788 | 14665776 | ID=cds.MS.gene038794.t1;Parent=MS.gene038794.t1 |
chr8.3 | exon | 14665983 | 14666365 | 14665983 | ID=MS.gene038794.t1.exon2;Parent=MS.gene038794.t1 |
chr8.3 | CDS | 14665983 | 14666365 | 14665983 | ID=cds.MS.gene038794.t1;Parent=MS.gene038794.t1 |
chr8.3 | exon | 14667156 | 14667232 | 14667156 | ID=MS.gene038794.t1.exon3;Parent=MS.gene038794.t1 |
chr8.3 | CDS | 14667156 | 14667232 | 14667156 | ID=cds.MS.gene038794.t1;Parent=MS.gene038794.t1 |
chr8.3 | exon | 14667315 | 14667465 | 14667315 | ID=MS.gene038794.t1.exon4;Parent=MS.gene038794.t1 |
chr8.3 | CDS | 14667315 | 14667465 | 14667315 | ID=cds.MS.gene038794.t1;Parent=MS.gene038794.t1 |
Gene Sequence |
Protein sequence |