Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039577.t1 | XP_003598417.1 | 98.3 | 419 | 7 | 0 | 82 | 500 | 82 | 500 | 1.00E-222 | 782.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039577.t1 | Q8L518 | 68.5 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 7.0e-140 | 498.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039577.t1 | G7IVT5 | 98.3 | 419 | 7 | 0 | 82 | 500 | 82 | 500 | 7.2e-223 | 782.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57514 | MS.gene039577 | PPI |
| MS.gene039577 | MS.gene83346 | PPI |
| MS.gene039577 | MS.gene27633 | PPI |
| MS.gene36871 | MS.gene039577 | PPI |
| MS.gene039577 | MS.gene50958 | PPI |
| MS.gene039577 | MS.gene52160 | PPI |
| MS.gene42220 | MS.gene039577 | PPI |
| MS.gene038844 | MS.gene039577 | PPI |
| MS.gene045848 | MS.gene039577 | PPI |
| MS.gene039577 | MS.gene58299 | PPI |
| MS.gene039577 | MS.gene019492 | PPI |
| MS.gene039577 | MS.gene067354 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039577.t1 | MTR_3g013430 | 98.000 | 500 | 10 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1016 |
| MS.gene039577.t1 | MTR_8g041330 | 72.051 | 390 | 106 | 1 | 113 | 499 | 19 | 408 | 0.0 | 585 |
| MS.gene039577.t1 | MTR_6g039820 | 66.667 | 327 | 108 | 1 | 128 | 453 | 17 | 343 | 1.38e-168 | 479 |
| MS.gene039577.t1 | MTR_1g097850 | 62.259 | 363 | 121 | 3 | 113 | 473 | 2 | 350 | 1.48e-166 | 474 |
| MS.gene039577.t1 | MTR_1g097850 | 64.122 | 262 | 79 | 2 | 113 | 373 | 2 | 249 | 2.04e-119 | 351 |
| MS.gene039577.t1 | MTR_6g040230 | 66.239 | 234 | 77 | 1 | 220 | 453 | 265 | 496 | 2.41e-112 | 342 |
| MS.gene039577.t1 | MTR_2g054370 | 35.312 | 320 | 192 | 5 | 140 | 453 | 56 | 366 | 4.95e-55 | 189 |
| MS.gene039577.t1 | MTR_8g041220 | 74.118 | 85 | 22 | 0 | 356 | 440 | 47 | 131 | 2.86e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039577.t1 | AT1G74320 | 68.529 | 340 | 107 | 0 | 115 | 454 | 7 | 346 | 3.37e-180 | 509 |
| MS.gene039577.t1 | AT4G09760 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 5.82e-158 | 452 |
| MS.gene039577.t1 | AT4G09760 | 63.030 | 330 | 119 | 3 | 126 | 453 | 14 | 342 | 5.82e-158 | 452 |
| MS.gene039577.t1 | AT1G71697 | 62.310 | 329 | 122 | 2 | 126 | 452 | 16 | 344 | 3.33e-156 | 448 |
| MS.gene039577.t1 | AT4G09760 | 58.294 | 211 | 85 | 3 | 126 | 334 | 14 | 223 | 5.24e-85 | 263 |
| MS.gene039577.t1 | AT4G09760 | 56.633 | 196 | 82 | 3 | 126 | 319 | 14 | 208 | 3.61e-75 | 236 |
| MS.gene039577.t1 | AT2G26830 | 36.254 | 331 | 192 | 6 | 131 | 453 | 45 | 364 | 8.00e-60 | 201 |
Find 110 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACAAGGAAATCTCTATTT+TGG | 0.136724 | 3.1:+8939067 | MS.gene039577:CDS |
| CCACCTGCTTGATTGCTTAT+AGG | 0.171347 | 3.1:-8937892 | None:intergenic |
| CGGTCAGCTTTGCTGCTTAC+AGG | 0.183900 | 3.1:-8938156 | None:intergenic |
| CAGGAAGATGAAGAGAGTTT+TGG | 0.228691 | 3.1:+8942058 | MS.gene039577:CDS |
| ATCATGGAACTCCTTCATTT+TGG | 0.238394 | 3.1:-8938810 | None:intergenic |
| TGATATCATTAGCAGGTAAA+TGG | 0.242873 | 3.1:+8938205 | MS.gene039577:CDS |
| TGCCACAATGATTTGCAATA+TGG | 0.280053 | 3.1:+8939128 | MS.gene039577:CDS |
| GTAGGAGTCGCCTGGTTTAC+AGG | 0.321895 | 3.1:-8937859 | None:intergenic |
| ACCAGAGTTCTTCGATCCTT+TGG | 0.330585 | 3.1:-8942030 | None:intergenic |
| GTACCCTCAGGGTTATTAAA+AGG | 0.333817 | 3.1:-8941864 | None:intergenic |
| ACTAGATGCAAATGCGTTAC+AGG | 0.349443 | 3.1:+8938236 | MS.gene039577:CDS |
| CAAAGAGAAACTCACTATTA+TGG | 0.357350 | 3.1:-8939186 | None:intergenic |
| AGAATCTCCTTTGCTTCTGC+TGG | 0.358458 | 3.1:-8938183 | None:intergenic |
| GGGCCTTTGGGGAATAATTT+CGG | 0.370418 | 3.1:+8940823 | MS.gene039577:CDS |
| AGGAGCGTGAAAGATTTGTT+AGG | 0.370918 | 3.1:+8940443 | MS.gene039577:CDS |
| CCACCTAAAGTGTCATTTAC+GGG | 0.371609 | 3.1:-8937967 | None:intergenic |
| ACAGAGGTTTCAAGAGTATT+GGG | 0.371611 | 3.1:+8941803 | MS.gene039577:CDS |
| GTGAAAAGAAAGCCAATCTT+TGG | 0.373883 | 3.1:+8938846 | MS.gene039577:CDS |
| CCTCACGAAAGGTTCTTGTT+AGG | 0.384064 | 3.1:+8938328 | MS.gene039577:CDS |
| CGAAGAACTCTGGTATCTTC+AGG | 0.394810 | 3.1:+8942039 | MS.gene039577:CDS |
| ACAGGGGTTTCAATGGCATC+TGG | 0.397243 | 3.1:-8938138 | None:intergenic |
| AACAGAGGTTTCAAGAGTAT+TGG | 0.403796 | 3.1:+8941802 | MS.gene039577:CDS |
| GGCCGCTATAAGAGCAGAAA+TGG | 0.419826 | 3.1:-8938789 | None:intergenic |
| AAGGTTCTTGTTAGGATCTA+CGG | 0.422916 | 3.1:+8938336 | MS.gene039577:CDS |
| ACCACCTAAAGTGTCATTTA+CGG | 0.432131 | 3.1:-8937968 | None:intergenic |
| CACCAGGCATATCTAGATCA+TGG | 0.437311 | 3.1:-8938826 | None:intergenic |
| ACTTCTCAACTTCTTGTAGT+AGG | 0.438883 | 3.1:-8940775 | None:intergenic |
| GCATCAGAGCTTAGAAGATA+AGG | 0.442159 | 3.1:-8941834 | None:intergenic |
| GCTGCTTACAGGGGTTTCAA+TGG | 0.448428 | 3.1:-8938145 | None:intergenic |
| GATATCATTAGCAGGTAAAT+GGG | 0.461907 | 3.1:+8938206 | MS.gene039577:CDS |
| GATTCTTCCGCAATGGGTGC+AGG | 0.463434 | 3.1:+8937796 | None:intergenic |
| GGTCAGCTTTGCTGCTTACA+GGG | 0.464141 | 3.1:-8938155 | None:intergenic |
| AGGTTCTTGTTAGGATCTAC+GGG | 0.464881 | 3.1:+8938337 | MS.gene039577:CDS |
| CCTCAATGTAGGCCAAAGAT+TGG | 0.466655 | 3.1:-8938858 | None:intergenic |
| TTTAATAACCCTGAGGGTAC+AGG | 0.469258 | 3.1:+8941867 | MS.gene039577:CDS |
| GGTCAGGGACCTCGTCTACT+AGG | 0.470717 | 3.1:+8938426 | MS.gene039577:CDS |
| CACAATTGAATTTGACTACA+AGG | 0.487535 | 3.1:+8941770 | MS.gene039577:CDS |
| TTGCTATAATCAAGAATATG+AGG | 0.491630 | 3.1:-8940321 | None:intergenic |
| GTACATGTCAAAGAATGGTC+AGG | 0.492273 | 3.1:+8938410 | MS.gene039577:CDS |
| GAATATGAGGCGTTTCTGTA+TGG | 0.492535 | 3.1:-8940308 | None:intergenic |
| GAGGTTTCCTCAGTTGTAGC+TGG | 0.492695 | 3.1:-8938309 | None:intergenic |
| TAGGATCTACGGGGAGGGTG+TGG | 0.493067 | 3.1:+8938347 | MS.gene039577:CDS |
| GCGTCTGCAGCGCATGCCAA+AGG | 0.493926 | 3.1:+8942014 | MS.gene039577:CDS |
| AATGATACAGCAGGTGATGA+TGG | 0.495476 | 3.1:+8938039 | MS.gene039577:CDS |
| GGAGCGTGAAAGATTTGTTA+GGG | 0.498076 | 3.1:+8940444 | MS.gene039577:CDS |
| TGCTCCACTTCACTCTCACT+TGG | 0.498911 | 3.1:-8940752 | None:intergenic |
| TTGATAGGGATGATGAAATA+CGG | 0.500021 | 3.1:+8938379 | MS.gene039577:CDS |
| TTTGTCTTCTCCAAAAGAAG+TGG | 0.502871 | 3.1:+8939022 | MS.gene039577:CDS |
| TCAGGCTCGCATCAACGGAT+AGG | 0.503411 | 3.1:+8939101 | MS.gene039577:CDS |
| AGGGCATATTTGAAGACCTC+AGG | 0.504968 | 3.1:+8940463 | MS.gene039577:CDS |
| TTTGCTATATCATATGCTAC+AGG | 0.505115 | 3.1:-8940258 | None:intergenic |
| CTTGATTATAGCAAATATCC+TGG | 0.508261 | 3.1:+8940330 | MS.gene039577:CDS |
| ATGAGGTATTTGAAATAAAG+TGG | 0.508683 | 3.1:+8938286 | MS.gene039577:CDS |
| AATCAAATACCTGTACCCTC+AGG | 0.510529 | 3.1:-8941876 | None:intergenic |
| CCAATCTTTGGCCTACATTG+AGG | 0.512237 | 3.1:+8938858 | MS.gene039577:CDS |
| TCTTATAGCGGCCAAAATGA+AGG | 0.519658 | 3.1:+8938799 | MS.gene039577:CDS |
| CAGGCTCGCATCAACGGATA+GGG | 0.520005 | 3.1:+8939102 | MS.gene039577:CDS |
| TCGCAGCCATCTCACAAAAG+TGG | 0.525991 | 3.1:-8940281 | None:intergenic |
| AACCCCGTAAATGACACTTT+AGG | 0.528458 | 3.1:+8937964 | MS.gene039577:CDS |
| TTTGAGTACATGTCAAAGAA+TGG | 0.530571 | 3.1:+8938405 | MS.gene039577:CDS |
| AGCTGTCAGGCTCGCATCAA+CGG | 0.536968 | 3.1:+8939096 | MS.gene039577:CDS |
| TGAAGAGTTTATACATGCAC+GGG | 0.537689 | 3.1:+8938470 | MS.gene039577:CDS |
| TTATGTACATACCTCAATGT+AGG | 0.540731 | 3.1:-8938869 | None:intergenic |
| CTTGTTAGGATCTACGGGGA+GGG | 0.546574 | 3.1:+8938342 | MS.gene039577:CDS |
| TCTCCTTTGCTTCTGCTGGA+AGG | 0.547716 | 3.1:-8938179 | None:intergenic |
| GAGATTCTGATATCATTAGC+AGG | 0.548741 | 3.1:+8938198 | MS.gene039577:CDS |
| GCAGGTGATGATGGAAAAGA+AGG | 0.548923 | 3.1:+8938048 | MS.gene039577:CDS |
| CACTATTATGGTCACAGAGT+TGG | 0.554152 | 3.1:-8939174 | None:intergenic |
| TTACAGGTGATCCCTCTCAA+GGG | 0.554414 | 3.1:+8938252 | MS.gene039577:CDS |
| TTGAAGAGTTTATACATGCA+CGG | 0.561716 | 3.1:+8938469 | MS.gene039577:CDS |
| TTTCTGTAGTAGGAGTCGCC+TGG | 0.566230 | 3.1:-8937867 | None:intergenic |
| TTCCATGATCTAGATATGCC+TGG | 0.568317 | 3.1:+8938824 | MS.gene039577:CDS |
| GCCAAAGGATCGAAGAACTC+TGG | 0.572715 | 3.1:+8942029 | MS.gene039577:CDS |
| ATCCATTTCTGCTCTTATAG+CGG | 0.576198 | 3.1:+8938787 | MS.gene039577:CDS |
| TGCTGAGAATCCTGTAAACC+AGG | 0.576627 | 3.1:+8937849 | MS.gene039577:CDS |
| ATCAAATACCTGTACCCTCA+GGG | 0.578244 | 3.1:-8941875 | None:intergenic |
| CCGCCTTCCAGCAGAAGCAA+AGG | 0.580944 | 3.1:+8938176 | MS.gene039577:CDS |
| AGAACCAAGTGAGAGTGAAG+TGG | 0.582495 | 3.1:+8940748 | MS.gene039577:CDS |
| CACCTAAAGTGTCATTTACG+GGG | 0.582742 | 3.1:-8937966 | None:intergenic |
| GGTTCTCTTGACAGACGTTG+AGG | 0.584712 | 3.1:+8940423 | MS.gene039577:intron |
| AATTCTACAAATGATACAGC+AGG | 0.584713 | 3.1:+8938030 | MS.gene039577:CDS |
| CCTATAAGCAATCAAGCAGG+TGG | 0.589660 | 3.1:+8937892 | MS.gene039577:CDS |
| AAAGTGGCCAGCTACAACTG+AGG | 0.589696 | 3.1:+8938302 | MS.gene039577:CDS |
| GTTACAGGTGATCCCTCTCA+AGG | 0.595301 | 3.1:+8938251 | MS.gene039577:CDS |
| GTCAGCTTTGCTGCTTACAG+GGG | 0.606553 | 3.1:-8938154 | None:intergenic |
| TCAGGGTTATTAAAAGGAGA+AGG | 0.608507 | 3.1:-8941858 | None:intergenic |
| TATAAGCAATCAAGCAGGTG+GGG | 0.609550 | 3.1:+8937894 | MS.gene039577:CDS |
| TACCATATTGCAAATCATTG+TGG | 0.610437 | 3.1:-8939130 | None:intergenic |
| CTTCAGAAATTGGCTTAGTG+AGG | 0.612289 | 3.1:+8938992 | MS.gene039577:intron |
| TACATGTCAAAGAATGGTCA+GGG | 0.612766 | 3.1:+8938411 | MS.gene039577:CDS |
| AACTGAGGAAACCTCACGAA+AGG | 0.614934 | 3.1:+8938317 | MS.gene039577:CDS |
| CCTTTGCTTCTGCTGGAAGG+CGG | 0.617396 | 3.1:-8938176 | None:intergenic |
| TTATTTGGACACGGTCGACA+AGG | 0.618896 | 3.1:+8939052 | MS.gene039577:CDS |
| GTTGCAAAAGACCAAGCAGT+TGG | 0.619982 | 3.1:+8937934 | MS.gene039577:CDS |
| AATCCTATAAGCAATCAAGC+AGG | 0.622217 | 3.1:+8937889 | MS.gene039577:CDS |
| GCTATAAGAGCAGAAATGGA+TGG | 0.622251 | 3.1:-8938785 | None:intergenic |
| TACAGGTGATCCCTCTCAAG+GGG | 0.630983 | 3.1:+8938253 | MS.gene039577:CDS |
| CTATAAGCAATCAAGCAGGT+GGG | 0.632457 | 3.1:+8937893 | MS.gene039577:CDS |
| GGTGCTATGAAAGACAAAGC+AGG | 0.639091 | 3.1:+8938069 | MS.gene039577:CDS |
| CCCGTAAATGACACTTTAGG+TGG | 0.644090 | 3.1:+8937967 | MS.gene039577:CDS |
| CCTAACAAGAACCTTTCGTG+AGG | 0.644921 | 3.1:-8938328 | None:intergenic |
| TCTTGTTAGGATCTACGGGG+AGG | 0.648442 | 3.1:+8938341 | MS.gene039577:CDS |
| GGTTTCAAGAGTATTGGGCA+AGG | 0.650192 | 3.1:+8941808 | MS.gene039577:CDS |
| ATCATTAGCAGGTAAATGGG+AGG | 0.658690 | 3.1:+8938209 | MS.gene039577:CDS |
| ATACCGAAATTATTCCCCAA+AGG | 0.681258 | 3.1:-8940826 | None:intergenic |
| GCAGGTGAAGATGACAAACA+AGG | 0.687986 | 3.1:+8938087 | MS.gene039577:CDS |
| ACAAGGAGTATGCGAAACAG+AGG | 0.696997 | 3.1:+8941787 | MS.gene039577:CDS |
| GTAAAACGTCCTAGTAGACG+AGG | 0.707228 | 3.1:-8938435 | None:intergenic |
| ACAGGTGATCCCTCTCAAGG+GGG | 0.737784 | 3.1:+8938254 | MS.gene039577:CDS |
| GGTTCTTGTTAGGATCTACG+GGG | 0.808372 | 3.1:+8938338 | MS.gene039577:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+GGG | + | chr3.1:8940524-8940543 | MS.gene039577:intron | 0.0% |
| !! | TTGTAAAAAAAATGAAAAAA+GGG | + | chr3.1:8939610-8939629 | MS.gene039577:intron | 10.0% |
| !! | TTTGTAAAAAAAATGAAAAA+AGG | + | chr3.1:8939609-8939628 | MS.gene039577:intron | 10.0% |
| !!! | ATATATAAATTATTGTTTTC+AGG | + | chr3.1:8941984-8942003 | MS.gene039577:intron | 10.0% |
| !!! | ATATTTAATTTAATTTTCGT+TGG | + | chr3.1:8939266-8939285 | MS.gene039577:intron | 10.0% |
| !!! | TATTTTTTACTTTTAAAACA+GGG | - | chr3.1:8939715-8939734 | None:intergenic | 10.0% |
| !!! | TTATTTTTTACTTTTAAAAC+AGG | - | chr3.1:8939716-8939735 | None:intergenic | 10.0% |
| !! | ACATTAAATCATAAGATATT+TGG | - | chr3.1:8940200-8940219 | None:intergenic | 15.0% |
| !! | GTTGCAAAAATAAAAATAAA+AGG | - | chr3.1:8941067-8941086 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGACAAAACAAA+AGG | - | chr3.1:8939458-8939477 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGACAAAACAAAA+GGG | - | chr3.1:8939457-8939476 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATTTTAAATGTT+TGG | + | chr3.1:8941657-8941676 | MS.gene039577:intron | 15.0% |
| !!! | TTTAAAATTGTGTACATATT+GGG | + | chr3.1:8940003-8940022 | MS.gene039577:intron | 15.0% |
| !!! | TTTATAATGCATCAATTTTA+TGG | - | chr3.1:8938589-8938608 | None:intergenic | 15.0% |
| !!! | TTTTAAAATTGTGTACATAT+TGG | + | chr3.1:8940002-8940021 | MS.gene039577:intron | 15.0% |
| !! | AAAAAAATTGTCAACGAAAA+AGG | - | chr3.1:8939487-8939506 | None:intergenic | 20.0% |
| !! | AATAAACCTATCTGTATTTA+TGG | + | chr3.1:8939866-8939885 | MS.gene039577:intron | 20.0% |
| !! | AATATGAATTAACCATAAGT+GGG | + | chr3.1:8941594-8941613 | MS.gene039577:intron | 20.0% |
| !! | ATTCATGATTATATGAATGA+TGG | - | chr3.1:8940667-8940686 | None:intergenic | 20.0% |
| !! | CAAAAATAAAAATAAAAGGC+GGG | - | chr3.1:8941063-8941082 | None:intergenic | 20.0% |
| !! | GCAAAAATAAAAATAAAAGG+CGG | - | chr3.1:8941064-8941083 | None:intergenic | 20.0% |
| !! | TCAATGAACAAATAAAACAA+AGG | - | chr3.1:8940094-8940113 | None:intergenic | 20.0% |
| !! | TGGCAAAAAAAAAATAATGA+AGG | - | chr3.1:8940180-8940199 | None:intergenic | 20.0% |
| !!! | AACATTTTTGTCAGTAAAAA+GGG | - | chr3.1:8939431-8939450 | None:intergenic | 20.0% |
| !!! | AAGTTTCTAGACAATTATTT+TGG | + | chr3.1:8941428-8941447 | MS.gene039577:intron | 20.0% |
| !!! | AGAAATGTATTTTATCTTGT+TGG | + | chr3.1:8941032-8941051 | MS.gene039577:intron | 20.0% |
| !!! | AGTTTCTAGACAATTATTTT+GGG | + | chr3.1:8941429-8941448 | MS.gene039577:intron | 20.0% |
| !!! | ATTATATAATTAGTCTGCAA+AGG | - | chr3.1:8939248-8939267 | None:intergenic | 20.0% |
| !!! | GAATGATGATTCTTTATTTT+TGG | - | chr3.1:8939843-8939862 | None:intergenic | 20.0% |
| !!! | TAACATTTTTGTCAGTAAAA+AGG | - | chr3.1:8939432-8939451 | None:intergenic | 20.0% |
| !!! | TGTATCATTTGTAGAATTTT+CGG | - | chr3.1:8938028-8938047 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTAAATGTTTGG+CGG | + | chr3.1:8941660-8941679 | MS.gene039577:intron | 20.0% |
| ! | AATTGTCTAGAAACTTAGAA+GGG | - | chr3.1:8941424-8941443 | None:intergenic | 25.0% |
| ! | ACTAGTATCACTTCAAATTT+AGG | + | chr3.1:8938609-8938628 | MS.gene039577:intron | 25.0% |
| ! | AGTTATTTAACAAACACACT+AGG | + | chr3.1:8940931-8940950 | MS.gene039577:intron | 25.0% |
| ! | ATGAAAAAGAGTCAAAAATC+AGG | - | chr3.1:8941364-8941383 | None:intergenic | 25.0% |
| ! | ATGAACAAATAAAACAAAGG+AGG | - | chr3.1:8940091-8940110 | None:intergenic | 25.0% |
| ! | ATGTGAAAATAATTAGTCAC+AGG | - | chr3.1:8940399-8940418 | None:intergenic | 25.0% |
| ! | ATTATTCTTCTTTGTACTCT+TGG | + | chr3.1:8940877-8940896 | MS.gene039577:intron | 25.0% |
| ! | CATTAAAATACAGAAAACCA+TGG | - | chr3.1:8941211-8941230 | None:intergenic | 25.0% |
| ! | GAATATGAATTAACCATAAG+TGG | + | chr3.1:8941593-8941612 | MS.gene039577:intron | 25.0% |
| ! | TAATTGTCTAGAAACTTAGA+AGG | - | chr3.1:8941425-8941444 | None:intergenic | 25.0% |
| ! | TACAAACAAAATTCTTCCAT+AGG | - | chr3.1:8939595-8939614 | None:intergenic | 25.0% |
| ! | TACCTATTATTTCATTTCCA+AGG | - | chr3.1:8941922-8941941 | None:intergenic | 25.0% |
| ! | TATTTCAATGCTTCAGAAAT+TGG | + | chr3.1:8938982-8939001 | MS.gene039577:intron | 25.0% |
| ! | TTGCTATAATCAAGAATATG+AGG | - | chr3.1:8940324-8940343 | None:intergenic | 25.0% |
| ! | TTTAATGTTATGTCTGTAAC+AGG | + | chr3.1:8940212-8940231 | MS.gene039577:intron | 25.0% |
| ! | TTTGAGAATTACAAAGGATT+GGG | + | chr3.1:8941455-8941474 | MS.gene039577:intron | 25.0% |
| ! | TTTGTTCCAAATCATGAAAT+AGG | - | chr3.1:8940587-8940606 | None:intergenic | 25.0% |
| !! | ATATGAATGATGGAATACAA+GGG | - | chr3.1:8940657-8940676 | None:intergenic | 25.0% |
| !! | ATGAGGTATTTGAAATAAAG+TGG | + | chr3.1:8938286-8938305 | MS.gene039577:CDS | 25.0% |
| !! | GATAATTATTTCTTCAGAAC+AGG | - | chr3.1:8939293-8939312 | None:intergenic | 25.0% |
| !! | TATATGAATGATGGAATACA+AGG | - | chr3.1:8940658-8940677 | None:intergenic | 25.0% |
| !! | TGTGACTAATTATTTTCACA+TGG | + | chr3.1:8940398-8940417 | MS.gene039577:intron | 25.0% |
| !! | TGTGGAAATTTTCTTTGATA+GGG | + | chr3.1:8938365-8938384 | MS.gene039577:CDS | 25.0% |
| !! | TTTGGAACAAAAAAGTTGTA+TGG | + | chr3.1:8940596-8940615 | MS.gene039577:intron | 25.0% |
| !!! | GATTCTTTATTTTTGGACAA+GGG | - | chr3.1:8939836-8939855 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTCATTGACA+TGG | + | chr3.1:8940096-8940115 | MS.gene039577:intron | 25.0% |
| !!! | TGATTCTTTATTTTTGGACA+AGG | - | chr3.1:8939837-8939856 | None:intergenic | 25.0% |
| !!! | TTTACTTTTAAAACAGGGTA+AGG | - | chr3.1:8939710-8939729 | None:intergenic | 25.0% |
| !!! | TTTTGAGAATTACAAAGGAT+TGG | + | chr3.1:8941454-8941473 | MS.gene039577:intron | 25.0% |
| AATTCTACAAATGATACAGC+AGG | + | chr3.1:8938030-8938049 | MS.gene039577:CDS | 30.0% | |
| ACGATGAAAATAATTACCTG+AGG | - | chr3.1:8940482-8940501 | None:intergenic | 30.0% | |
| AGTTTCTGTTCCTGATATTA+TGG | + | chr3.1:8940708-8940727 | MS.gene039577:intron | 30.0% | |
| ATAAATTCAGAAGGGAAACA+TGG | - | chr3.1:8938735-8938754 | None:intergenic | 30.0% | |
| ATAGTAAATACCCTGATCAT+TGG | - | chr3.1:8941098-8941117 | None:intergenic | 30.0% | |
| ATATGTTTCCATAGTACTGT+TGG | - | chr3.1:8941389-8941408 | None:intergenic | 30.0% | |
| ATCAATGTTGTGTAACTCAA+AGG | - | chr3.1:8939808-8939827 | None:intergenic | 30.0% | |
| CAAAGAGAAACTCACTATTA+TGG | - | chr3.1:8939189-8939208 | None:intergenic | 30.0% | |
| CACAATTGAATTTGACTACA+AGG | + | chr3.1:8941770-8941789 | MS.gene039577:CDS | 30.0% | |
| CTTGATTATAGCAAATATCC+TGG | + | chr3.1:8940330-8940349 | MS.gene039577:CDS | 30.0% | |
| GATATCATTAGCAGGTAAAT+GGG | + | chr3.1:8938206-8938225 | MS.gene039577:CDS | 30.0% | |
| GATTATCCAAACAAATTGCT+TGG | + | chr3.1:8941524-8941543 | MS.gene039577:intron | 30.0% | |
| GTTTCTGTTCCTGATATTAT+GGG | + | chr3.1:8940709-8940728 | MS.gene039577:intron | 30.0% | |
| TACCATATTGCAAATCATTG+TGG | - | chr3.1:8939133-8939152 | None:intergenic | 30.0% | |
| TCAATGTTGTGTAACTCAAA+GGG | - | chr3.1:8939807-8939826 | None:intergenic | 30.0% | |
| TCAGCACTTATCTTTATGTT+GGG | + | chr3.1:8941308-8941327 | MS.gene039577:intron | 30.0% | |
| TGATATCATTAGCAGGTAAA+TGG | + | chr3.1:8938205-8938224 | MS.gene039577:CDS | 30.0% | |
| TGATGACCTATTTCATGATT+TGG | + | chr3.1:8940578-8940597 | MS.gene039577:intron | 30.0% | |
| TGCCTTGGAAATGAAATAAT+AGG | + | chr3.1:8941917-8941936 | MS.gene039577:intron | 30.0% | |
| TTACAAAAGAAATTGCATCG+TGG | - | chr3.1:8941646-8941665 | None:intergenic | 30.0% | |
| TTATGTACATACCTCAATGT+AGG | - | chr3.1:8938872-8938891 | None:intergenic | 30.0% | |
| TTCAGCACTTATCTTTATGT+TGG | + | chr3.1:8941307-8941326 | MS.gene039577:intron | 30.0% | |
| TTGAAGAGTTTATACATGCA+CGG | + | chr3.1:8938469-8938488 | MS.gene039577:CDS | 30.0% | |
| TTGAGAATTACAAAGGATTG+GGG | + | chr3.1:8941456-8941475 | MS.gene039577:intron | 30.0% | |
| TTGATAGGGATGATGAAATA+CGG | + | chr3.1:8938379-8938398 | MS.gene039577:CDS | 30.0% | |
| TTTGAGTACATGTCAAAGAA+TGG | + | chr3.1:8938405-8938424 | MS.gene039577:CDS | 30.0% | |
| ! | AAACTACAACCAAGTACTTT+TGG | + | chr3.1:8941683-8941702 | MS.gene039577:intron | 30.0% |
| ! | AACTGATTCACTCAATCATT+TGG | + | chr3.1:8940133-8940152 | MS.gene039577:intron | 30.0% |
| ! | AATAGTCCAAGCAATTTGTT+TGG | - | chr3.1:8941533-8941552 | None:intergenic | 30.0% |
| ! | ACTAATTATTTTCACATGGC+TGG | + | chr3.1:8940402-8940421 | MS.gene039577:intron | 30.0% |
| ! | AGAAGTGGAAGCTTTTTATT+TGG | + | chr3.1:8939037-8939056 | MS.gene039577:CDS | 30.0% |
| ! | CAAAATTCTTCCATAGGTTT+TGG | - | chr3.1:8939589-8939608 | None:intergenic | 30.0% |
| ! | CTTATAGGATTTTCTGTAGT+AGG | - | chr3.1:8937880-8937899 | None:intergenic | 30.0% |
| ! | GTGTGGAAATTTTCTTTGAT+AGG | + | chr3.1:8938364-8938383 | MS.gene039577:CDS | 30.0% |
| ! | TAAAAAGCTTCCACTTCTTT+TGG | - | chr3.1:8939035-8939054 | None:intergenic | 30.0% |
| ! | TTTGCTATATCATATGCTAC+AGG | - | chr3.1:8940261-8940280 | None:intergenic | 30.0% |
| ! | TTTTGGTAAAGTTCAGTTGA+AGG | - | chr3.1:8939572-8939591 | None:intergenic | 30.0% |
| !! | ATAAGTGCTGAAGATTCAAT+GGG | - | chr3.1:8941299-8941318 | None:intergenic | 30.0% |
| !! | GGAAATCTCTATTTTGGAAA+AGG | + | chr3.1:8939073-8939092 | MS.gene039577:CDS | 30.0% |
| AAAATGAAAAAAGGGCAACC+CGG | + | chr3.1:8939618-8939637 | MS.gene039577:intron | 35.0% | |
| AAATAACTTCTCCCTTTCCA+AGG | - | chr3.1:8940919-8940938 | None:intergenic | 35.0% | |
| AACCTATCTGTATTTATGGC+CGG | + | chr3.1:8939870-8939889 | MS.gene039577:intron | 35.0% | |
| AACTAACAGTCCAGTTCTTA+AGG | - | chr3.1:8940692-8940711 | None:intergenic | 35.0% | |
| AACTGTTCAAACCAATGATC+AGG | + | chr3.1:8941084-8941103 | MS.gene039577:intron | 35.0% | |
| AAGGTTCTTGTTAGGATCTA+CGG | + | chr3.1:8938336-8938355 | MS.gene039577:CDS | 35.0% | |
| AATCCTATAAGCAATCAAGC+AGG | + | chr3.1:8937889-8937908 | MS.gene039577:CDS | 35.0% | |
| AATGCTATGTTTCGAGATCA+TGG | + | chr3.1:8939734-8939753 | MS.gene039577:intron | 35.0% | |
| ACTGTTCAAACCAATGATCA+GGG | + | chr3.1:8941085-8941104 | MS.gene039577:intron | 35.0% | |
| ACTTCTCAACTTCTTGTAGT+AGG | - | chr3.1:8940778-8940797 | None:intergenic | 35.0% | |
| AGAAACTTAGAAGGGTAGAA+GGG | - | chr3.1:8941416-8941435 | None:intergenic | 35.0% | |
| AGCGTCTGATAAATTCAGAA+GGG | - | chr3.1:8938743-8938762 | None:intergenic | 35.0% | |
| AGTCAAAAATCAGGTGAGAA+AGG | - | chr3.1:8941355-8941374 | None:intergenic | 35.0% | |
| ATACCGAAATTATTCCCCAA+AGG | - | chr3.1:8940829-8940848 | None:intergenic | 35.0% | |
| ATAGACTGACAAAAGAGAAG+TGG | + | chr3.1:8940976-8940995 | MS.gene039577:intron | 35.0% | |
| ATCCATTTCTGCTCTTATAG+CGG | + | chr3.1:8938787-8938806 | MS.gene039577:CDS | 35.0% | |
| ATCTTCTGATTATCTTGCTC+AGG | + | chr3.1:8941737-8941756 | MS.gene039577:intron | 35.0% | |
| CAATGTTGTGTAACTCAAAG+GGG | - | chr3.1:8939806-8939825 | None:intergenic | 35.0% | |
| CTGAACTTTACCAAAACCTA+TGG | + | chr3.1:8939576-8939595 | MS.gene039577:intron | 35.0% | |
| GAGATTCTGATATCATTAGC+AGG | + | chr3.1:8938198-8938217 | MS.gene039577:CDS | 35.0% | |
| GATTCACTCAATCATTTGGT+TGG | + | chr3.1:8940137-8940156 | MS.gene039577:intron | 35.0% | |
| GTGAAAAGAAAGCCAATCTT+TGG | + | chr3.1:8938846-8938865 | MS.gene039577:CDS | 35.0% | |
| TACATGTCAAAGAATGGTCA+GGG | + | chr3.1:8938411-8938430 | MS.gene039577:CDS | 35.0% | |
| TAGAAACTTAGAAGGGTAGA+AGG | - | chr3.1:8941417-8941436 | None:intergenic | 35.0% | |
| TAGTCTGAGAAATGATGTTG+AGG | - | chr3.1:8938959-8938978 | None:intergenic | 35.0% | |
| TCAGGGTTATTAAAAGGAGA+AGG | - | chr3.1:8941861-8941880 | None:intergenic | 35.0% | |
| TCATGAATGACCTTAAGAAC+TGG | + | chr3.1:8940679-8940698 | MS.gene039577:intron | 35.0% | |
| TCTTCTGATTATCTTGCTCA+GGG | + | chr3.1:8941738-8941757 | MS.gene039577:intron | 35.0% | |
| TCTTTATGTTGGGACATTAG+AGG | + | chr3.1:8941318-8941337 | MS.gene039577:intron | 35.0% | |
| TGAAGAGTTTATACATGCAC+GGG | + | chr3.1:8938470-8938489 | MS.gene039577:CDS | 35.0% | |
| TTATGAACCGTAACACTTCA+GGG | - | chr3.1:8938652-8938671 | None:intergenic | 35.0% | |
| TTCTTCTTTGTACTCTTGGA+TGG | + | chr3.1:8940881-8940900 | MS.gene039577:intron | 35.0% | |
| TTTATGAACCGTAACACTTC+AGG | - | chr3.1:8938653-8938672 | None:intergenic | 35.0% | |
| TTTCATGACCAACAGTACTA+TGG | + | chr3.1:8941378-8941397 | MS.gene039577:intron | 35.0% | |
| TTTGTCTTCTCCAAAAGAAG+TGG | + | chr3.1:8939022-8939041 | MS.gene039577:CDS | 35.0% | |
| ! | ACTCGCAAATCATCTTTTCT+GGG | + | chr3.1:8940802-8940821 | MS.gene039577:CDS | 35.0% |
| ! | AGGAAGATGAAGAGAGTTTT+GGG | + | chr3.1:8942059-8942078 | MS.gene039577:CDS | 35.0% |
| ! | ATCAGGGTATTTACTATTCG+TGG | + | chr3.1:8941101-8941120 | MS.gene039577:intron | 35.0% |
| ! | ATCATGGAACTCCTTCATTT+TGG | - | chr3.1:8938813-8938832 | None:intergenic | 35.0% |
| ! | CGACAAGGAAATCTCTATTT+TGG | + | chr3.1:8939067-8939086 | MS.gene039577:CDS | 35.0% |
| ! | CTACTAGGACGTTTTACAAA+TGG | + | chr3.1:8938441-8938460 | MS.gene039577:CDS | 35.0% |
| ! | TCTCCTTTTAATAACCCTGA+GGG | + | chr3.1:8941861-8941880 | MS.gene039577:CDS | 35.0% |
| ! | TGCCACAATGATTTGCAATA+TGG | + | chr3.1:8939128-8939147 | MS.gene039577:CDS | 35.0% |
| ! | TGGTCTTTTGCAACATTTAC+AGG | - | chr3.1:8937928-8937947 | None:intergenic | 35.0% |
| ! | TTCTCCTTTTAATAACCCTG+AGG | + | chr3.1:8941860-8941879 | MS.gene039577:CDS | 35.0% |
| !! | ACCACCTAAAGTGTCATTTA+CGG | - | chr3.1:8937971-8937990 | None:intergenic | 35.0% |
| !! | GATAAGTGCTGAAGATTCAA+TGG | - | chr3.1:8941300-8941319 | None:intergenic | 35.0% |
| !! | GGAAGCTTTTTATTTGGACA+CGG | + | chr3.1:8939043-8939062 | MS.gene039577:CDS | 35.0% |
| !! | GGGCATTTTGAGAATTACAA+AGG | + | chr3.1:8941449-8941468 | MS.gene039577:intron | 35.0% |
| !! | GTTGTTTTGTTATACTGCCT+TGG | + | chr3.1:8941902-8941921 | MS.gene039577:intron | 35.0% |
| !! | TCTTCGAAACCAAAAGTACT+TGG | - | chr3.1:8941695-8941714 | None:intergenic | 35.0% |
| !! | TTTTGGAGAAGACAAACGTT+TGG | - | chr3.1:8939018-8939037 | None:intergenic | 35.0% |
| !!! | TCTTTATTTTTGGACAAGGG+AGG | - | chr3.1:8939833-8939852 | None:intergenic | 35.0% |
| AACCCCGTAAATGACACTTT+AGG | + | chr3.1:8937964-8937983 | MS.gene039577:CDS | 40.0% | |
| AATATCCTGGTATGAACCTG+TGG | + | chr3.1:8940343-8940362 | MS.gene039577:intron | 40.0% | |
| AATCAAATACCTGTACCCTC+AGG | - | chr3.1:8941879-8941898 | None:intergenic | 40.0% | |
| AATGATACAGCAGGTGATGA+TGG | + | chr3.1:8938039-8938058 | MS.gene039577:CDS | 40.0% | |
| ACTAGATGCAAATGCGTTAC+AGG | + | chr3.1:8938236-8938255 | MS.gene039577:CDS | 40.0% | |
| AGCTAGCTATTCATCAACCA+TGG | + | chr3.1:8941191-8941210 | MS.gene039577:intron | 40.0% | |
| AGGTTCTTGTTAGGATCTAC+GGG | + | chr3.1:8938337-8938356 | MS.gene039577:CDS | 40.0% | |
| ATATTATGGGACTTGAACGC+AGG | + | chr3.1:8940722-8940741 | MS.gene039577:intron | 40.0% | |
| ATCAAATACCTGTACCCTCA+GGG | - | chr3.1:8941878-8941897 | None:intergenic | 40.0% | |
| ATCATTAGCAGGTAAATGGG+AGG | + | chr3.1:8938209-8938228 | MS.gene039577:CDS | 40.0% | |
| ATCCGGCCATAAATACAGAT+AGG | - | chr3.1:8939875-8939894 | None:intergenic | 40.0% | |
| ATTGATGAGAAGCCCACTTA+TGG | - | chr3.1:8941609-8941628 | None:intergenic | 40.0% | |
| CACTATTATGGTCACAGAGT+TGG | - | chr3.1:8939177-8939196 | None:intergenic | 40.0% | |
| CAGCGTCTGATAAATTCAGA+AGG | - | chr3.1:8938744-8938763 | None:intergenic | 40.0% | |
| CCCACATTCAAAATGCTATC+CGG | - | chr3.1:8939892-8939911 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3.1:8939684-8939703 | None:intergenic | 40.0% | |
| CGTTCAAGTCCCATAATATC+AGG | - | chr3.1:8940721-8940740 | None:intergenic | 40.0% | |
| CTATAAGCAATCAAGCAGGT+GGG | + | chr3.1:8937893-8937912 | MS.gene039577:CDS | 40.0% | |
| CTTTGTACTCTTGGATGGTT+TGG | + | chr3.1:8940886-8940905 | MS.gene039577:intron | 40.0% | |
| GCACATCGAGTTCATAAGTT+TGG | - | chr3.1:8938703-8938722 | None:intergenic | 40.0% | |
| GCATCAGAGCTTAGAAGATA+AGG | - | chr3.1:8941837-8941856 | None:intergenic | 40.0% | |
| GCTATAAGAGCAGAAATGGA+TGG | - | chr3.1:8938788-8938807 | None:intergenic | 40.0% | |
| GGTAGTCACACACAAAATGT+TGG | + | chr3.1:8941938-8941957 | MS.gene039577:intron | 40.0% | |
| GTACATGTCAAAGAATGGTC+AGG | + | chr3.1:8938410-8938429 | MS.gene039577:CDS | 40.0% | |
| GTACCCTCAGGGTTATTAAA+AGG | - | chr3.1:8941867-8941886 | None:intergenic | 40.0% | |
| GTAGATGATTCTCAGCAAGA+AGG | - | chr3.1:8939966-8939985 | None:intergenic | 40.0% | |
| TATAAGCAATCAAGCAGGTG+GGG | + | chr3.1:8937894-8937913 | MS.gene039577:CDS | 40.0% | |
| TCAAAGTCCAGTCTAACACT+TGG | - | chr3.1:8941506-8941525 | None:intergenic | 40.0% | |
| TCTTATAGCGGCCAAAATGA+AGG | + | chr3.1:8938799-8938818 | MS.gene039577:CDS | 40.0% | |
| TGGTAAAGTTCAGTTGAAGG+AGG | - | chr3.1:8939569-8939588 | None:intergenic | 40.0% | |
| TGTCAGTCTATCAAAACCCT+TGG | - | chr3.1:8940967-8940986 | None:intergenic | 40.0% | |
| TGTGTACATATTGGGAGTCA+AGG | + | chr3.1:8940011-8940030 | MS.gene039577:intron | 40.0% | |
| TTATCGACCAAGTGTTAGAC+TGG | + | chr3.1:8941496-8941515 | MS.gene039577:intron | 40.0% | |
| TTCCATGATCTAGATATGCC+TGG | + | chr3.1:8938824-8938843 | MS.gene039577:CDS | 40.0% | |
| TTGTTCAGGTCGAAAAGCTA+AGG | + | chr3.1:8942089-8942108 | MS.gene039577:CDS | 40.0% | |
| ! | ACTAGGTTTTTGTGCACCAA+GGG | + | chr3.1:8940948-8940967 | MS.gene039577:intron | 40.0% |
| ! | AGGAGCGTGAAAGATTTGTT+AGG | + | chr3.1:8940443-8940462 | MS.gene039577:CDS | 40.0% |
| ! | CACTCGCAAATCATCTTTTC+TGG | + | chr3.1:8940801-8940820 | MS.gene039577:CDS | 40.0% |
| ! | CAGGAAGATGAAGAGAGTTT+TGG | + | chr3.1:8942058-8942077 | MS.gene039577:CDS | 40.0% |
| ! | CCGGATAGCATTTTGAATGT+GGG | + | chr3.1:8939889-8939908 | MS.gene039577:intron | 40.0% |
| ! | CGGATAGCATTTTGAATGTG+GGG | + | chr3.1:8939890-8939909 | MS.gene039577:intron | 40.0% |
| ! | CTCGCAAATCATCTTTTCTG+GGG | + | chr3.1:8940803-8940822 | MS.gene039577:CDS | 40.0% |
| ! | CTTCAGAAATTGGCTTAGTG+AGG | + | chr3.1:8938992-8939011 | MS.gene039577:intron | 40.0% |
| ! | GAATATGAGGCGTTTCTGTA+TGG | - | chr3.1:8940311-8940330 | None:intergenic | 40.0% |
| ! | TTGTTCACCCTGAAGTGTTA+CGG | + | chr3.1:8938642-8938661 | MS.gene039577:intron | 40.0% |
| ! | TTTAATAACCCTGAGGGTAC+AGG | + | chr3.1:8941867-8941886 | MS.gene039577:CDS | 40.0% |
| !! | ACTATTCGTGGCTTGTTTCA+TGG | + | chr3.1:8941113-8941132 | MS.gene039577:intron | 40.0% |
| !! | AGCAAACCACTTTTGTGAGA+TGG | + | chr3.1:8940275-8940294 | MS.gene039577:CDS | 40.0% |
| !! | ATTTTGGAAAAGGAGCTGTC+AGG | + | chr3.1:8939083-8939102 | MS.gene039577:CDS | 40.0% |
| !! | CACCTAAAGTGTCATTTACG+GGG | - | chr3.1:8937969-8937988 | None:intergenic | 40.0% |
| !! | CCACCTAAAGTGTCATTTAC+GGG | - | chr3.1:8937970-8937989 | None:intergenic | 40.0% |
| !! | CTATTCGTGGCTTGTTTCAT+GGG | + | chr3.1:8941114-8941133 | MS.gene039577:intron | 40.0% |
| !! | GATGAATAGCTAGCTCTGTA+TGG | - | chr3.1:8941186-8941205 | None:intergenic | 40.0% |
| !! | GGAGCGTGAAAGATTTGTTA+GGG | + | chr3.1:8940444-8940463 | MS.gene039577:CDS | 40.0% |
| !!! | AGATTGGCTTTCTTTTCACC+AGG | - | chr3.1:8938845-8938864 | None:intergenic | 40.0% |
| !!! | ATGAAGAGAGTTTTGGGTCT+TGG | + | chr3.1:8942065-8942084 | MS.gene039577:CDS | 40.0% |
| AACTGAGGAAACCTCACGAA+AGG | + | chr3.1:8938317-8938336 | MS.gene039577:CDS | 45.0% | |
| ACCAGAGTTCTTCGATCCTT+TGG | - | chr3.1:8942033-8942052 | None:intergenic | 45.0% | |
| AGAACCAAGTGAGAGTGAAG+TGG | + | chr3.1:8940748-8940767 | MS.gene039577:CDS | 45.0% | |
| AGAATCTCCTTTGCTTCTGC+TGG | - | chr3.1:8938186-8938205 | None:intergenic | 45.0% | |
| AGGGCATATTTGAAGACCTC+AGG | + | chr3.1:8940463-8940482 | MS.gene039577:CDS | 45.0% | |
| CACCAGGCATATCTAGATCA+TGG | - | chr3.1:8938829-8938848 | None:intergenic | 45.0% | |
| CCAATCTTTGGCCTACATTG+AGG | + | chr3.1:8938858-8938877 | MS.gene039577:CDS | 45.0% | |
| CCACCTGCTTGATTGCTTAT+AGG | - | chr3.1:8937895-8937914 | None:intergenic | 45.0% | |
| CCCGTAAATGACACTTTAGG+TGG | + | chr3.1:8937967-8937986 | MS.gene039577:CDS | 45.0% | |
| CCTAACAAGAACCTTTCGTG+AGG | - | chr3.1:8938331-8938350 | None:intergenic | 45.0% | |
| CCTATAAGCAATCAAGCAGG+TGG | + | chr3.1:8937892-8937911 | MS.gene039577:CDS | 45.0% | |
| CCTCAATGTAGGCCAAAGAT+TGG | - | chr3.1:8938861-8938880 | None:intergenic | 45.0% | |
| CCTCACGAAAGGTTCTTGTT+AGG | + | chr3.1:8938328-8938347 | MS.gene039577:CDS | 45.0% | |
| CGAAGAACTCTGGTATCTTC+AGG | + | chr3.1:8942039-8942058 | MS.gene039577:CDS | 45.0% | |
| GCAGGTGAAGATGACAAACA+AGG | + | chr3.1:8938087-8938106 | MS.gene039577:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3.1:8939685-8939704 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3.1:8939688-8939707 | None:intergenic | 45.0% | |
| GGAAACCAACAACACTCATC+AGG | - | chr3.1:8939945-8939964 | None:intergenic | 45.0% | |
| GGTTCTTGTTAGGATCTACG+GGG | + | chr3.1:8938338-8938357 | MS.gene039577:CDS | 45.0% | |
| GTAAAACGTCCTAGTAGACG+AGG | - | chr3.1:8938438-8938457 | None:intergenic | 45.0% | |
| GTTCAGTTGAAGGAGGAAAC+AGG | - | chr3.1:8939562-8939581 | None:intergenic | 45.0% | |
| GTTGCAAAAGACCAAGCAGT+TGG | + | chr3.1:8937934-8937953 | MS.gene039577:CDS | 45.0% | |
| GTTGTGTAACTCAAAGGGGA+GGG | - | chr3.1:8939802-8939821 | None:intergenic | 45.0% | |
| TGAATGCTTCAGAAAGCCAC+AGG | - | chr3.1:8940362-8940381 | None:intergenic | 45.0% | |
| TGCTGAGAATCCTGTAAACC+AGG | + | chr3.1:8937849-8937868 | MS.gene039577:CDS | 45.0% | |
| TGTTGTGTAACTCAAAGGGG+AGG | - | chr3.1:8939803-8939822 | None:intergenic | 45.0% | |
| TTACAGGTGATCCCTCTCAA+GGG | + | chr3.1:8938252-8938271 | MS.gene039577:CDS | 45.0% | |
| TTATTTGGACACGGTCGACA+AGG | + | chr3.1:8939052-8939071 | MS.gene039577:CDS | 45.0% | |
| TTGTGTAACTCAAAGGGGAG+GGG | - | chr3.1:8939801-8939820 | None:intergenic | 45.0% | |
| ! | CACTAGGTTTTTGTGCACCA+AGG | + | chr3.1:8940947-8940966 | MS.gene039577:intron | 45.0% |
| ! | GCCGGATAGCATTTTGAATG+TGG | + | chr3.1:8939888-8939907 | MS.gene039577:intron | 45.0% |
| ! | GGGCCTTTGGGGAATAATTT+CGG | + | chr3.1:8940823-8940842 | MS.gene039577:CDS | 45.0% |
| ! | GGTGCTATGAAAGACAAAGC+AGG | + | chr3.1:8938069-8938088 | MS.gene039577:CDS | 45.0% |
| ! | TTGGCTTGAGACCTTGGAAA+GGG | + | chr3.1:8940905-8940924 | MS.gene039577:intron | 45.0% |
| !! | GCAGGTGATGATGGAAAAGA+AGG | + | chr3.1:8938048-8938067 | MS.gene039577:CDS | 45.0% |
| !! | GGTTTCAAGAGTATTGGGCA+AGG | + | chr3.1:8941808-8941827 | MS.gene039577:CDS | 45.0% |
| !! | TTTGGCTTGAGACCTTGGAA+AGG | + | chr3.1:8940904-8940923 | MS.gene039577:intron | 45.0% |
| !!! | ATCATCTTTTCTGGGGCCTT+TGG | + | chr3.1:8940810-8940829 | MS.gene039577:CDS | 45.0% |
| !!! | TCATCTTTTCTGGGGCCTTT+GGG | + | chr3.1:8940811-8940830 | MS.gene039577:CDS | 45.0% |
| !!! | TTTTGGGTCTTGGCTTGTTC+AGG | + | chr3.1:8942075-8942094 | MS.gene039577:CDS | 45.0% |
| !!! | CTTTTTTTTTTTTTTTTTTT+TGG | + | chr3.1:8940523-8940542 | MS.gene039577:intron | 5.0% |
| AAAGTGGCCAGCTACAACTG+AGG | + | chr3.1:8938302-8938321 | MS.gene039577:CDS | 50.0% | |
| ACAGGGGTTTCAATGGCATC+TGG | - | chr3.1:8938141-8938160 | None:intergenic | 50.0% | |
| CAAGGGGGCAATGACAAATG+AGG | + | chr3.1:8938269-8938288 | MS.gene039577:CDS | 50.0% | |
| CTTGTTAGGATCTACGGGGA+GGG | + | chr3.1:8938342-8938361 | MS.gene039577:CDS | 50.0% | |
| GAAAGCCACAGGTTCATACC+AGG | - | chr3.1:8940351-8940370 | None:intergenic | 50.0% | |
| GAGGTTTCCTCAGTTGTAGC+TGG | - | chr3.1:8938312-8938331 | None:intergenic | 50.0% | |
| GCCAAAGGATCGAAGAACTC+TGG | + | chr3.1:8942029-8942048 | MS.gene039577:CDS | 50.0% | |
| GCTGCTTACAGGGGTTTCAA+TGG | - | chr3.1:8938148-8938167 | None:intergenic | 50.0% | |
| GGCCGCTATAAGAGCAGAAA+TGG | - | chr3.1:8938792-8938811 | None:intergenic | 50.0% | |
| GGTTCTCTTGACAGACGTTG+AGG | + | chr3.1:8940423-8940442 | MS.gene039577:intron | 50.0% | |
| GTTACAGGTGATCCCTCTCA+AGG | + | chr3.1:8938251-8938270 | MS.gene039577:CDS | 50.0% | |
| TACAGGTGATCCCTCTCAAG+GGG | + | chr3.1:8938253-8938272 | MS.gene039577:CDS | 50.0% | |
| TCAAAGGGGAGGGGATTTAC+AGG | - | chr3.1:8939792-8939811 | None:intergenic | 50.0% | |
| TCGCAGCCATCTCACAAAAG+TGG | - | chr3.1:8940284-8940303 | None:intergenic | 50.0% | |
| TCTCCTTTGCTTCTGCTGGA+AGG | - | chr3.1:8938182-8938201 | None:intergenic | 50.0% | |
| TCTTGTTAGGATCTACGGGG+AGG | + | chr3.1:8938341-8938360 | MS.gene039577:CDS | 50.0% | |
| TGCTCCACTTCACTCTCACT+TGG | - | chr3.1:8940755-8940774 | None:intergenic | 50.0% | |
| TTGTCATTGCCCCCTTGAGA+GGG | - | chr3.1:8938266-8938285 | None:intergenic | 50.0% | |
| TTTCTGTAGTAGGAGTCGCC+TGG | - | chr3.1:8937870-8937889 | None:intergenic | 50.0% | |
| TTTGTCATTGCCCCCTTGAG+AGG | - | chr3.1:8938267-8938286 | None:intergenic | 50.0% | |
| ! | GACAGCCTGATGAGTGTTGT+TGG | + | chr3.1:8939937-8939956 | MS.gene039577:intron | 50.0% |
| ! | GGTCAGCTTTGCTGCTTACA+GGG | - | chr3.1:8938158-8938177 | None:intergenic | 50.0% |
| ! | GGTTTTCTGCACCAACTGCT+TGG | - | chr3.1:8937948-8937967 | None:intergenic | 50.0% |
| ! | GTCAGCTTTGCTGCTTACAG+GGG | - | chr3.1:8938157-8938176 | None:intergenic | 50.0% |
| !! | GATGGTTTGGCTTGAGACCT+TGG | + | chr3.1:8940899-8940918 | MS.gene039577:intron | 50.0% |
| !!! | CATCTTTTCTGGGGCCTTTG+GGG | + | chr3.1:8940812-8940831 | MS.gene039577:CDS | 50.0% |
| ACAGGTGATCCCTCTCAAGG+GGG | + | chr3.1:8938254-8938273 | MS.gene039577:CDS | 55.0% | |
| AGCTGTCAGGCTCGCATCAA+CGG | + | chr3.1:8939096-8939115 | MS.gene039577:CDS | 55.0% | |
| CAGGCTCGCATCAACGGATA+GGG | + | chr3.1:8939102-8939121 | MS.gene039577:CDS | 55.0% | |
| CCTTTGCTTCTGCTGGAAGG+CGG | - | chr3.1:8938179-8938198 | None:intergenic | 55.0% | |
| GTAGGAGTCGCCTGGTTTAC+AGG | - | chr3.1:8937862-8937881 | None:intergenic | 55.0% | |
| TCAGGCTCGCATCAACGGAT+AGG | + | chr3.1:8939101-8939120 | MS.gene039577:CDS | 55.0% | |
| ! | CGGTCAGCTTTGCTGCTTAC+AGG | - | chr3.1:8938159-8938178 | None:intergenic | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3.1:8939644-8939663 | MS.gene039577:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3.1:8939640-8939659 | None:intergenic | 60.0% | |
| CCGCCTTCCAGCAGAAGCAA+AGG | + | chr3.1:8938176-8938195 | MS.gene039577:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3.1:8939645-8939664 | MS.gene039577:intron | 60.0% | |
| GGTCAGGGACCTCGTCTACT+AGG | + | chr3.1:8938426-8938445 | MS.gene039577:CDS | 60.0% | |
| TAGGATCTACGGGGAGGGTG+TGG | + | chr3.1:8938347-8938366 | MS.gene039577:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3.1:8939672-8939691 | None:intergenic | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr3.1:8939657-8939676 | MS.gene039577:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3.1:8939670-8939689 | MS.gene039577:intron | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr3.1:8939657-8939676 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr3.1:8939656-8939675 | MS.gene039577:intron | 65.0% | |
| GCGTCTGCAGCGCATGCCAA+AGG | + | chr3.1:8942014-8942033 | MS.gene039577:CDS | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3.1:8939639-8939658 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3.1:8939656-8939675 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr3.1:8939655-8939674 | MS.gene039577:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3.1:8939651-8939670 | MS.gene039577:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3.1:8939650-8939669 | MS.gene039577:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 8937808 | 8942109 | 8937808 | ID=MS.gene039577 |
| chr3.1 | mRNA | 8937808 | 8942109 | 8937808 | ID=MS.gene039577.t1;Parent=MS.gene039577 |
| chr3.1 | exon | 8937808 | 8938491 | 8937808 | ID=MS.gene039577.t1.exon1;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8937808 | 8938491 | 8937808 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8938758 | 8938879 | 8938758 | ID=MS.gene039577.t1.exon2;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8938758 | 8938879 | 8938758 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8938998 | 8939193 | 8938998 | ID=MS.gene039577.t1.exon3;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8938998 | 8939193 | 8938998 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8940234 | 8940351 | 8940234 | ID=MS.gene039577.t1.exon4;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8940234 | 8940351 | 8940234 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8940437 | 8940484 | 8940437 | ID=MS.gene039577.t1.exon5;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8940437 | 8940484 | 8940437 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8940744 | 8940844 | 8940744 | ID=MS.gene039577.t1.exon6;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8940744 | 8940844 | 8940744 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8941759 | 8941888 | 8941759 | ID=MS.gene039577.t1.exon7;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8941759 | 8941888 | 8941759 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| chr3.1 | exon | 8942006 | 8942109 | 8942006 | ID=MS.gene039577.t1.exon8;Parent=MS.gene039577.t1 |
| chr3.1 | CDS | 8942006 | 8942109 | 8942006 | ID=cds.MS.gene039577.t1;Parent=MS.gene039577.t1 |
| Gene Sequence |
| Protein sequence |
