Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20276.t1 | AAB41812.1 | 99.1 | 325 | 2 | 1 | 4 | 327 | 1 | 325 | 2.50E-182 | 647.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20276.t1 | Q9SZE7 | 64.8 | 324 | 112 | 1 | 1 | 324 | 4 | 325 | 3.4e-119 | 429.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20276.t1 | Q40367 | 99.1 | 325 | 2 | 1 | 4 | 327 | 1 | 325 | 1.8e-182 | 647.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene20276 | 0.836253 | 1.04E-56 | -1.69E-46 |
| MS.gene050877 | MS.gene20276 | 0.806713 | 7.20E-50 | -1.69E-46 |
| MS.gene051067 | MS.gene20276 | 0.816477 | 5.42E-52 | -1.69E-46 |
| MS.gene051478 | MS.gene20276 | 0.805007 | 1.64E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene20276 | 0.818054 | 2.39E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene20276 | 0.80481 | 1.81E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene20276 | 0.82029 | 7.42E-53 | -1.69E-46 |
| MS.gene055764 | MS.gene20276 | 0.801179 | 1.02E-48 | -1.69E-46 |
| MS.gene057082 | MS.gene20276 | 0.800785 | 1.22E-48 | -1.69E-46 |
| MS.gene058909 | MS.gene20276 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene058912 | MS.gene20276 | 0.800031 | 1.74E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20276 | MS.gene48746 | PPI |
| MS.gene20276 | MS.gene88044 | PPI |
| MS.gene20276 | MS.gene45786 | PPI |
| MS.gene48733 | MS.gene20276 | PPI |
| MS.gene20276 | MS.gene35853 | PPI |
| MS.gene20276 | MS.gene071284 | PPI |
| MS.gene20276 | MS.gene015231 | PPI |
| MS.gene20276 | MS.gene067613 | PPI |
| MS.gene20276 | MS.gene040455 | PPI |
| MS.gene53782 | MS.gene20276 | PPI |
| MS.gene35931 | MS.gene20276 | PPI |
| MS.gene20276 | MS.gene57204 | PPI |
| MS.gene20276 | MS.gene09575 | PPI |
| MS.gene67066 | MS.gene20276 | PPI |
| MS.gene20276 | MS.gene043043 | PPI |
| MS.gene20276 | MS.gene072888 | PPI |
| MS.gene20276 | MS.gene35795 | PPI |
| MS.gene20276 | MS.gene44482 | PPI |
| MS.gene20276 | MS.gene80170 | PPI |
| MS.gene20276 | MS.gene48740 | PPI |
| MS.gene32715 | MS.gene20276 | PPI |
| MS.gene043054 | MS.gene20276 | PPI |
| MS.gene014836 | MS.gene20276 | PPI |
| MS.gene20276 | MS.gene88144 | PPI |
| MS.gene029047 | MS.gene20276 | PPI |
| MS.gene014924 | MS.gene20276 | PPI |
| MS.gene060053 | MS.gene20276 | PPI |
| MS.gene20276 | MS.gene32635 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20276.t1 | MTR_5g016010 | 96.951 | 328 | 9 | 1 | 1 | 327 | 1 | 328 | 0.0 | 653 |
| MS.gene20276.t1 | MTR_4g095450 | 71.341 | 328 | 88 | 2 | 1 | 327 | 1 | 323 | 1.71e-178 | 496 |
| MS.gene20276.t1 | MTR_4g127670 | 67.442 | 301 | 95 | 2 | 25 | 325 | 23 | 320 | 2.82e-152 | 430 |
| MS.gene20276.t1 | MTR_1g009750 | 61.059 | 321 | 121 | 3 | 8 | 327 | 10 | 327 | 4.68e-143 | 407 |
| MS.gene20276.t1 | MTR_7g029030 | 57.538 | 325 | 130 | 4 | 1 | 325 | 1 | 317 | 5.87e-130 | 374 |
| MS.gene20276.t1 | MTR_1g009750 | 56.075 | 321 | 120 | 4 | 8 | 327 | 10 | 310 | 1.02e-126 | 365 |
| MS.gene20276.t1 | MTR_8g062780 | 44.172 | 326 | 174 | 4 | 1 | 324 | 1 | 320 | 1.54e-90 | 273 |
| MS.gene20276.t1 | MTR_0286s0010 | 42.500 | 320 | 178 | 4 | 10 | 327 | 18 | 333 | 2.26e-84 | 258 |
| MS.gene20276.t1 | MTR_6g008075 | 42.500 | 320 | 178 | 4 | 10 | 327 | 18 | 333 | 2.26e-84 | 258 |
| MS.gene20276.t1 | MTR_3g092990 | 43.082 | 318 | 177 | 3 | 11 | 327 | 11 | 325 | 3.49e-84 | 257 |
| MS.gene20276.t1 | MTR_1g090760 | 40.994 | 322 | 183 | 4 | 8 | 324 | 7 | 326 | 2.92e-83 | 255 |
| MS.gene20276.t1 | MTR_4g087965 | 42.484 | 306 | 170 | 4 | 25 | 326 | 41 | 344 | 4.89e-81 | 250 |
| MS.gene20276.t1 | MTR_1g101830 | 42.073 | 328 | 176 | 8 | 2 | 327 | 6 | 321 | 3.31e-80 | 247 |
| MS.gene20276.t1 | MTR_2g029815 | 42.903 | 310 | 170 | 4 | 21 | 327 | 24 | 329 | 1.32e-78 | 244 |
| MS.gene20276.t1 | MTR_5g022870 | 41.896 | 327 | 168 | 8 | 4 | 327 | 8 | 315 | 7.78e-78 | 241 |
| MS.gene20276.t1 | MTR_2g029860 | 41.456 | 316 | 179 | 4 | 15 | 327 | 17 | 329 | 9.76e-78 | 241 |
| MS.gene20276.t1 | MTR_1g025980 | 40.248 | 323 | 181 | 6 | 7 | 327 | 5 | 317 | 1.02e-76 | 238 |
| MS.gene20276.t1 | MTR_8g075100 | 42.857 | 308 | 163 | 5 | 22 | 327 | 22 | 318 | 1.62e-76 | 237 |
| MS.gene20276.t1 | MTR_2g029820 | 42.718 | 309 | 170 | 4 | 22 | 327 | 25 | 329 | 3.58e-76 | 238 |
| MS.gene20276.t1 | MTR_2g029850 | 40.841 | 333 | 187 | 6 | 1 | 327 | 1 | 329 | 1.20e-75 | 236 |
| MS.gene20276.t1 | MTR_2g088770 | 40.566 | 318 | 182 | 5 | 12 | 327 | 12 | 324 | 1.08e-74 | 233 |
| MS.gene20276.t1 | MTR_3g092990 | 41.824 | 318 | 170 | 5 | 11 | 327 | 11 | 314 | 1.31e-74 | 232 |
| MS.gene20276.t1 | MTR_1g077000 | 39.521 | 334 | 181 | 6 | 1 | 327 | 7 | 326 | 1.80e-74 | 232 |
| MS.gene20276.t1 | MTR_4g046713 | 40.881 | 318 | 183 | 2 | 11 | 327 | 12 | 325 | 2.60e-73 | 229 |
| MS.gene20276.t1 | MTR_2g029800 | 40.260 | 308 | 179 | 3 | 22 | 327 | 25 | 329 | 3.25e-73 | 230 |
| MS.gene20276.t1 | MTR_2g084020 | 39.024 | 328 | 188 | 5 | 1 | 327 | 1 | 317 | 6.37e-73 | 228 |
| MS.gene20276.t1 | MTR_2g084090 | 39.628 | 323 | 179 | 7 | 9 | 327 | 7 | 317 | 6.44e-73 | 228 |
| MS.gene20276.t1 | MTR_7g107520 | 40.491 | 326 | 185 | 6 | 3 | 327 | 2 | 319 | 1.59e-72 | 227 |
| MS.gene20276.t1 | MTR_2g029750 | 40.453 | 309 | 177 | 5 | 22 | 327 | 25 | 329 | 3.83e-72 | 227 |
| MS.gene20276.t1 | MTR_2g029830 | 41.100 | 309 | 175 | 4 | 22 | 327 | 24 | 328 | 7.05e-72 | 227 |
| MS.gene20276.t1 | MTR_2g084010 | 39.210 | 329 | 186 | 6 | 1 | 327 | 1 | 317 | 7.10e-72 | 225 |
| MS.gene20276.t1 | MTR_2g084080 | 38.125 | 320 | 187 | 4 | 9 | 327 | 7 | 316 | 8.02e-72 | 225 |
| MS.gene20276.t1 | MTR_2g029740 | 40.129 | 309 | 178 | 5 | 22 | 327 | 25 | 329 | 1.92e-71 | 226 |
| MS.gene20276.t1 | MTR_2g040000 | 37.963 | 324 | 190 | 5 | 10 | 327 | 12 | 330 | 1.99e-71 | 225 |
| MS.gene20276.t1 | MTR_4g125940 | 39.441 | 322 | 186 | 4 | 10 | 327 | 12 | 328 | 2.30e-71 | 224 |
| MS.gene20276.t1 | MTR_2g028980 | 41.100 | 309 | 175 | 5 | 22 | 327 | 25 | 329 | 7.55e-71 | 224 |
| MS.gene20276.t1 | MTR_1g086320 | 39.645 | 338 | 187 | 8 | 1 | 327 | 1 | 332 | 9.79e-71 | 223 |
| MS.gene20276.t1 | MTR_7g093370 | 39.130 | 322 | 182 | 6 | 7 | 324 | 56 | 367 | 1.14e-70 | 224 |
| MS.gene20276.t1 | MTR_2g084110 | 37.812 | 320 | 188 | 4 | 9 | 327 | 7 | 316 | 3.83e-70 | 221 |
| MS.gene20276.t1 | MTR_2g029560 | 38.554 | 332 | 191 | 7 | 1 | 327 | 1 | 324 | 5.19e-70 | 221 |
| MS.gene20276.t1 | MTR_4g114210 | 40.061 | 327 | 179 | 7 | 6 | 325 | 1 | 317 | 8.36e-70 | 220 |
| MS.gene20276.t1 | MTR_8g076820 | 39.297 | 313 | 182 | 4 | 20 | 327 | 20 | 329 | 8.50e-70 | 221 |
| MS.gene20276.t1 | MTR_1g086490 | 39.420 | 345 | 185 | 8 | 1 | 327 | 1 | 339 | 4.37e-69 | 219 |
| MS.gene20276.t1 | MTR_7g072510 | 38.816 | 304 | 176 | 3 | 24 | 327 | 18 | 311 | 6.44e-69 | 218 |
| MS.gene20276.t1 | MTR_4g133800 | 39.799 | 299 | 168 | 6 | 30 | 327 | 45 | 332 | 6.60e-69 | 218 |
| MS.gene20276.t1 | MTR_3g094650 | 38.199 | 322 | 183 | 6 | 7 | 324 | 9 | 318 | 7.93e-69 | 218 |
| MS.gene20276.t1 | MTR_2g029910 | 41.479 | 311 | 172 | 7 | 22 | 327 | 26 | 331 | 2.40e-68 | 218 |
| MS.gene20276.t1 | MTR_1g038680 | 40.461 | 304 | 168 | 8 | 31 | 327 | 34 | 331 | 3.62e-68 | 216 |
| MS.gene20276.t1 | MTR_4g031140 | 37.255 | 306 | 186 | 4 | 22 | 327 | 24 | 323 | 6.72e-68 | 216 |
| MS.gene20276.t1 | MTR_7g086820 | 39.604 | 303 | 173 | 5 | 24 | 326 | 18 | 310 | 7.80e-68 | 215 |
| MS.gene20276.t1 | MTR_5g021060 | 39.867 | 301 | 175 | 4 | 29 | 327 | 33 | 329 | 1.49e-67 | 215 |
| MS.gene20276.t1 | MTR_2g029730 | 38.066 | 331 | 195 | 6 | 1 | 327 | 1 | 325 | 1.83e-67 | 215 |
| MS.gene20276.t1 | MTR_1g054205 | 37.072 | 321 | 192 | 5 | 7 | 324 | 9 | 322 | 3.04e-67 | 214 |
| MS.gene20276.t1 | MTR_2g008710 | 35.604 | 323 | 195 | 6 | 8 | 325 | 8 | 322 | 2.92e-66 | 211 |
| MS.gene20276.t1 | MTR_7g072480 | 38.486 | 317 | 183 | 4 | 12 | 327 | 10 | 315 | 3.25e-66 | 211 |
| MS.gene20276.t1 | MTR_4g029200 | 38.636 | 308 | 177 | 5 | 21 | 327 | 41 | 337 | 5.79e-66 | 211 |
| MS.gene20276.t1 | MTR_4g030890 | 38.047 | 297 | 178 | 4 | 31 | 327 | 105 | 395 | 1.01e-65 | 213 |
| MS.gene20276.t1 | MTR_4g029170 | 37.705 | 305 | 178 | 5 | 22 | 324 | 23 | 317 | 2.76e-65 | 209 |
| MS.gene20276.t1 | MTR_6g043240 | 38.788 | 330 | 180 | 8 | 6 | 327 | 15 | 330 | 2.83e-65 | 209 |
| MS.gene20276.t1 | MTR_5g017860 | 35.077 | 325 | 199 | 7 | 7 | 327 | 9 | 325 | 4.21e-65 | 208 |
| MS.gene20276.t1 | MTR_2g084000 | 37.538 | 325 | 190 | 6 | 6 | 327 | 4 | 318 | 4.70e-65 | 208 |
| MS.gene20276.t1 | MTR_5g074970 | 37.994 | 329 | 186 | 7 | 2 | 324 | 6 | 322 | 8.75e-65 | 207 |
| MS.gene20276.t1 | MTR_5g017850 | 34.568 | 324 | 202 | 7 | 7 | 327 | 9 | 325 | 4.90e-64 | 206 |
| MS.gene20276.t1 | MTR_7g086870 | 40.404 | 297 | 162 | 6 | 31 | 326 | 27 | 309 | 9.02e-64 | 204 |
| MS.gene20276.t1 | MTR_5g074860 | 37.037 | 324 | 188 | 8 | 6 | 324 | 9 | 321 | 1.19e-63 | 204 |
| MS.gene20276.t1 | MTR_5g083860 | 37.461 | 323 | 187 | 6 | 5 | 324 | 11 | 321 | 1.37e-63 | 204 |
| MS.gene20276.t1 | MTR_3g072190 | 37.003 | 327 | 196 | 3 | 1 | 327 | 1 | 317 | 1.67e-63 | 204 |
| MS.gene20276.t1 | MTR_4g083710 | 36.923 | 325 | 192 | 5 | 7 | 327 | 8 | 323 | 1.68e-63 | 204 |
| MS.gene20276.t1 | MTR_0155s0040 | 37.908 | 306 | 174 | 5 | 23 | 327 | 24 | 314 | 1.74e-63 | 204 |
| MS.gene20276.t1 | MTR_2g437770 | 37.954 | 303 | 175 | 7 | 26 | 327 | 50 | 340 | 2.21e-63 | 204 |
| MS.gene20276.t1 | MTR_3g466200 | 37.654 | 324 | 179 | 8 | 6 | 324 | 11 | 316 | 7.07e-63 | 202 |
| MS.gene20276.t1 | MTR_3g105790 | 36.223 | 323 | 195 | 5 | 5 | 325 | 6 | 319 | 1.42e-62 | 202 |
| MS.gene20276.t1 | MTR_3g094670 | 37.879 | 330 | 187 | 7 | 1 | 324 | 1 | 318 | 5.65e-62 | 200 |
| MS.gene20276.t1 | MTR_4g029180 | 36.700 | 297 | 178 | 4 | 29 | 324 | 30 | 317 | 5.68e-62 | 200 |
| MS.gene20276.t1 | MTR_6g043280 | 35.604 | 323 | 191 | 6 | 11 | 327 | 20 | 331 | 2.24e-61 | 199 |
| MS.gene20276.t1 | MTR_2g008160 | 37.742 | 310 | 178 | 7 | 22 | 325 | 20 | 320 | 2.45e-61 | 198 |
| MS.gene20276.t1 | MTR_6g043460 | 37.273 | 330 | 189 | 6 | 2 | 324 | 6 | 324 | 1.56e-60 | 197 |
| MS.gene20276.t1 | MTR_4g125940 | 41.328 | 271 | 150 | 4 | 61 | 327 | 8 | 273 | 1.83e-60 | 195 |
| MS.gene20276.t1 | MTR_3g094630 | 37.879 | 330 | 187 | 7 | 1 | 324 | 1 | 318 | 2.11e-60 | 196 |
| MS.gene20276.t1 | MTR_2g029830 | 41.923 | 260 | 144 | 4 | 71 | 327 | 5 | 260 | 3.67e-60 | 194 |
| MS.gene20276.t1 | MTR_4g074995 | 36.615 | 325 | 180 | 6 | 7 | 327 | 5 | 307 | 1.55e-59 | 193 |
| MS.gene20276.t1 | MTR_4g122640 | 35.599 | 309 | 189 | 7 | 22 | 327 | 34 | 335 | 1.68e-59 | 194 |
| MS.gene20276.t1 | MTR_5g074760 | 37.578 | 322 | 185 | 7 | 8 | 324 | 7 | 317 | 7.43e-59 | 192 |
| MS.gene20276.t1 | MTR_6g027440 | 37.460 | 315 | 187 | 6 | 11 | 324 | 5 | 310 | 1.28e-58 | 191 |
| MS.gene20276.t1 | MTR_4g029190 | 37.838 | 296 | 170 | 6 | 35 | 327 | 55 | 339 | 1.38e-58 | 192 |
| MS.gene20276.t1 | MTR_3g467600 | 36.615 | 325 | 190 | 7 | 8 | 327 | 10 | 323 | 1.56e-57 | 189 |
| MS.gene20276.t1 | MTR_5g074710 | 36.957 | 322 | 187 | 7 | 8 | 324 | 7 | 317 | 2.30e-57 | 188 |
| MS.gene20276.t1 | MTR_5g014100 | 35.737 | 319 | 192 | 5 | 17 | 327 | 17 | 330 | 3.06e-57 | 188 |
| MS.gene20276.t1 | MTR_5g074740 | 36.646 | 322 | 188 | 7 | 8 | 324 | 7 | 317 | 7.01e-57 | 187 |
| MS.gene20276.t1 | MTR_1g115900 | 37.383 | 321 | 185 | 8 | 11 | 327 | 12 | 320 | 8.11e-57 | 187 |
| MS.gene20276.t1 | MTR_5g049280 | 33.861 | 316 | 191 | 8 | 22 | 327 | 29 | 336 | 4.21e-56 | 186 |
| MS.gene20276.t1 | MTR_2g067440 | 32.749 | 342 | 195 | 6 | 16 | 327 | 50 | 386 | 1.16e-55 | 186 |
| MS.gene20276.t1 | MTR_1g022970 | 35.880 | 301 | 188 | 3 | 26 | 324 | 46 | 343 | 1.22e-55 | 184 |
| MS.gene20276.t1 | MTR_2g099175 | 33.657 | 309 | 184 | 5 | 25 | 324 | 35 | 331 | 6.51e-55 | 182 |
| MS.gene20276.t1 | MTR_7g026990 | 34.154 | 325 | 200 | 8 | 6 | 327 | 8 | 321 | 7.07e-55 | 182 |
| MS.gene20276.t1 | MTR_4g132490 | 33.775 | 302 | 192 | 5 | 25 | 324 | 28 | 323 | 1.42e-54 | 181 |
| MS.gene20276.t1 | MTR_3g466180 | 35.714 | 322 | 191 | 5 | 5 | 324 | 12 | 319 | 2.92e-53 | 177 |
| MS.gene20276.t1 | MTR_4g074990 | 32.923 | 325 | 189 | 6 | 7 | 327 | 5 | 304 | 9.57e-53 | 176 |
| MS.gene20276.t1 | MTR_2g077990 | 32.036 | 334 | 191 | 6 | 24 | 325 | 74 | 403 | 8.32e-52 | 176 |
| MS.gene20276.t1 | MTR_2g078610 | 31.437 | 334 | 193 | 7 | 24 | 325 | 74 | 403 | 3.12e-51 | 175 |
| MS.gene20276.t1 | MTR_3g072190 | 37.838 | 259 | 151 | 3 | 69 | 327 | 2 | 250 | 4.19e-50 | 167 |
| MS.gene20276.t1 | MTR_1g066710 | 35.179 | 307 | 187 | 5 | 24 | 327 | 25 | 322 | 1.30e-49 | 168 |
| MS.gene20276.t1 | MTR_1g066640 | 35.505 | 307 | 186 | 5 | 24 | 327 | 25 | 322 | 3.15e-49 | 167 |
| MS.gene20276.t1 | MTR_4g132110 | 33.882 | 304 | 189 | 5 | 26 | 326 | 32 | 326 | 3.18e-49 | 167 |
| MS.gene20276.t1 | MTR_2g008730 | 31.077 | 325 | 187 | 6 | 6 | 325 | 6 | 298 | 3.18e-49 | 166 |
| MS.gene20276.t1 | MTR_2g078280 | 32.399 | 321 | 181 | 6 | 24 | 312 | 74 | 390 | 4.48e-49 | 169 |
| MS.gene20276.t1 | MTR_1g066380 | 35.048 | 311 | 182 | 6 | 24 | 327 | 25 | 322 | 1.61e-48 | 165 |
| MS.gene20276.t1 | MTR_3g105790 | 37.449 | 243 | 146 | 3 | 85 | 325 | 5 | 243 | 5.59e-48 | 162 |
| MS.gene20276.t1 | MTR_0147s0010 | 33.540 | 322 | 177 | 7 | 26 | 327 | 77 | 381 | 6.53e-48 | 165 |
| MS.gene20276.t1 | MTR_5g033470 | 33.010 | 309 | 193 | 7 | 24 | 324 | 71 | 373 | 2.14e-47 | 164 |
| MS.gene20276.t1 | MTR_4g132110 | 33.333 | 309 | 189 | 7 | 26 | 326 | 32 | 331 | 2.73e-47 | 162 |
| MS.gene20276.t1 | MTR_2g008160 | 33.333 | 312 | 154 | 7 | 22 | 325 | 20 | 285 | 4.23e-47 | 160 |
| MS.gene20276.t1 | MTR_1g066680 | 34.740 | 308 | 186 | 6 | 24 | 327 | 25 | 321 | 9.07e-46 | 158 |
| MS.gene20276.t1 | MTR_4g074980 | 34.749 | 259 | 155 | 5 | 6 | 260 | 5 | 253 | 6.26e-45 | 154 |
| MS.gene20276.t1 | MTR_4g074980 | 30.368 | 326 | 186 | 7 | 6 | 327 | 5 | 293 | 1.11e-43 | 152 |
| MS.gene20276.t1 | MTR_5g074860 | 31.481 | 324 | 167 | 8 | 6 | 324 | 9 | 282 | 7.41e-42 | 147 |
| MS.gene20276.t1 | MTR_2g067450 | 32.692 | 312 | 191 | 9 | 24 | 327 | 9 | 309 | 1.73e-41 | 147 |
| MS.gene20276.t1 | MTR_2g029880 | 39.691 | 194 | 105 | 3 | 136 | 327 | 4 | 187 | 3.13e-38 | 135 |
| MS.gene20276.t1 | MTR_2g008160 | 37.931 | 203 | 103 | 6 | 22 | 221 | 20 | 202 | 1.60e-35 | 128 |
| MS.gene20276.t1 | MTR_1g066380 | 35.094 | 265 | 152 | 6 | 70 | 327 | 3 | 254 | 1.68e-35 | 129 |
| MS.gene20276.t1 | MTR_5g074700 | 36.245 | 229 | 121 | 7 | 102 | 327 | 7 | 213 | 6.93e-34 | 124 |
| MS.gene20276.t1 | MTR_3g072210 | 38.503 | 187 | 106 | 4 | 140 | 324 | 55 | 234 | 7.45e-32 | 119 |
| MS.gene20276.t1 | MTR_7g072490 | 31.933 | 238 | 96 | 6 | 72 | 308 | 2 | 174 | 2.08e-26 | 104 |
| MS.gene20276.t1 | MTR_7g086790 | 36.126 | 191 | 97 | 6 | 73 | 263 | 17 | 182 | 4.14e-25 | 100 |
| MS.gene20276.t1 | MTR_2g078560 | 26.941 | 219 | 129 | 3 | 138 | 325 | 99 | 317 | 1.07e-23 | 99.8 |
| MS.gene20276.t1 | MTR_4g031040 | 33.784 | 148 | 79 | 3 | 121 | 266 | 5 | 135 | 1.33e-22 | 92.0 |
| MS.gene20276.t1 | MTR_3g072260 | 36.765 | 136 | 83 | 2 | 1 | 136 | 1 | 133 | 2.20e-18 | 80.9 |
| MS.gene20276.t1 | MTR_5g058120 | 31.875 | 160 | 98 | 2 | 165 | 324 | 7 | 155 | 4.72e-18 | 82.8 |
| MS.gene20276.t1 | MTR_1g098320 | 47.368 | 76 | 40 | 0 | 251 | 326 | 47 | 122 | 2.95e-16 | 75.1 |
| MS.gene20276.t1 | MTR_3g107060 | 32.584 | 178 | 92 | 7 | 46 | 211 | 92 | 253 | 6.54e-16 | 77.4 |
| MS.gene20276.t1 | MTR_4g114220 | 43.820 | 89 | 37 | 3 | 50 | 138 | 27 | 102 | 7.73e-14 | 68.2 |
| MS.gene20276.t1 | MTR_3g462850 | 30.282 | 142 | 90 | 6 | 193 | 327 | 9 | 148 | 7.89e-14 | 68.6 |
| MS.gene20276.t1 | MTR_4g012865 | 45.161 | 62 | 34 | 0 | 31 | 92 | 82 | 143 | 3.57e-13 | 66.6 |
| MS.gene20276.t1 | MTR_7g107500 | 39.583 | 96 | 56 | 2 | 232 | 327 | 3 | 96 | 4.41e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20276.t1 | AT4G37530 | 66.337 | 303 | 102 | 0 | 22 | 324 | 23 | 325 | 2.42e-153 | 433 |
| MS.gene20276.t1 | AT3G49960 | 62.769 | 325 | 120 | 1 | 1 | 324 | 1 | 325 | 1.14e-152 | 431 |
| MS.gene20276.t1 | AT5G67400 | 62.154 | 325 | 122 | 1 | 1 | 324 | 1 | 325 | 1.49e-150 | 426 |
| MS.gene20276.t1 | AT4G37520 | 64.784 | 301 | 106 | 0 | 24 | 324 | 25 | 325 | 3.61e-150 | 425 |
| MS.gene20276.t1 | AT4G30170 | 63.158 | 304 | 108 | 1 | 24 | 327 | 25 | 324 | 3.42e-148 | 420 |
| MS.gene20276.t1 | AT2G18980 | 61.538 | 325 | 119 | 2 | 3 | 327 | 4 | 322 | 1.29e-147 | 418 |
| MS.gene20276.t1 | AT4G37520 | 64.452 | 301 | 104 | 1 | 24 | 324 | 25 | 322 | 4.29e-147 | 417 |
| MS.gene20276.t1 | AT4G37530 | 68.462 | 260 | 82 | 0 | 22 | 281 | 23 | 282 | 2.41e-135 | 386 |
| MS.gene20276.t1 | AT5G14130 | 55.000 | 320 | 139 | 4 | 7 | 325 | 12 | 327 | 1.22e-118 | 345 |
| MS.gene20276.t1 | AT5G14130 | 55.000 | 320 | 139 | 4 | 7 | 325 | 53 | 368 | 5.20e-118 | 345 |
| MS.gene20276.t1 | AT4G17690 | 45.307 | 309 | 160 | 4 | 17 | 324 | 18 | 318 | 1.98e-94 | 283 |
| MS.gene20276.t1 | AT5G47000 | 46.026 | 302 | 156 | 3 | 24 | 324 | 31 | 326 | 1.05e-89 | 271 |
| MS.gene20276.t1 | AT2G34060 | 44.156 | 308 | 166 | 4 | 23 | 326 | 39 | 344 | 1.52e-87 | 266 |
| MS.gene20276.t1 | AT5G40150 | 46.078 | 306 | 157 | 4 | 23 | 327 | 29 | 327 | 2.09e-86 | 263 |
| MS.gene20276.t1 | AT3G28200 | 41.883 | 308 | 166 | 4 | 23 | 327 | 18 | 315 | 3.81e-82 | 252 |
| MS.gene20276.t1 | AT3G21770 | 41.945 | 329 | 182 | 6 | 1 | 326 | 4 | 326 | 1.23e-79 | 246 |
| MS.gene20276.t1 | AT1G05260 | 42.154 | 325 | 179 | 6 | 6 | 326 | 4 | 323 | 9.57e-79 | 243 |
| MS.gene20276.t1 | AT1G24110 | 41.720 | 314 | 179 | 3 | 12 | 324 | 8 | 318 | 2.62e-78 | 242 |
| MS.gene20276.t1 | AT5G51890 | 42.395 | 309 | 168 | 7 | 21 | 327 | 21 | 321 | 2.97e-78 | 242 |
| MS.gene20276.t1 | AT5G42180 | 42.500 | 320 | 171 | 8 | 7 | 324 | 5 | 313 | 4.78e-78 | 241 |
| MS.gene20276.t1 | AT5G06730 | 39.441 | 322 | 187 | 4 | 8 | 327 | 18 | 333 | 9.70e-75 | 234 |
| MS.gene20276.t1 | AT1G71695 | 40.717 | 307 | 171 | 5 | 21 | 325 | 39 | 336 | 7.67e-73 | 229 |
| MS.gene20276.t1 | AT4G11290 | 39.091 | 330 | 193 | 6 | 1 | 327 | 1 | 325 | 8.84e-72 | 226 |
| MS.gene20276.t1 | AT3G03670 | 38.170 | 317 | 185 | 5 | 11 | 324 | 9 | 317 | 9.16e-72 | 225 |
| MS.gene20276.t1 | AT3G49120 | 39.264 | 326 | 187 | 5 | 10 | 327 | 12 | 334 | 1.16e-71 | 226 |
| MS.gene20276.t1 | AT3G01190 | 39.077 | 325 | 189 | 6 | 1 | 324 | 1 | 317 | 1.52e-71 | 225 |
| MS.gene20276.t1 | AT3G49110 | 39.877 | 326 | 185 | 5 | 10 | 327 | 13 | 335 | 6.61e-71 | 224 |
| MS.gene20276.t1 | AT3G32980 | 39.748 | 317 | 184 | 4 | 15 | 327 | 20 | 333 | 8.26e-71 | 224 |
| MS.gene20276.t1 | AT2G18140 | 37.685 | 337 | 197 | 4 | 1 | 327 | 1 | 334 | 3.70e-70 | 222 |
| MS.gene20276.t1 | AT5G19880 | 37.730 | 326 | 195 | 5 | 4 | 324 | 3 | 325 | 1.31e-69 | 220 |
| MS.gene20276.t1 | AT5G06720 | 39.542 | 306 | 178 | 5 | 22 | 324 | 28 | 329 | 2.92e-69 | 219 |
| MS.gene20276.t1 | AT2G38380 | 37.812 | 320 | 193 | 4 | 11 | 327 | 16 | 332 | 3.23e-69 | 219 |
| MS.gene20276.t1 | AT4G08780 | 40.968 | 310 | 176 | 4 | 22 | 327 | 20 | 326 | 4.32e-69 | 219 |
| MS.gene20276.t1 | AT4G08770 | 40.645 | 310 | 177 | 4 | 22 | 327 | 20 | 326 | 5.65e-69 | 219 |
| MS.gene20276.t1 | AT5G17820 | 39.297 | 313 | 177 | 5 | 12 | 324 | 10 | 309 | 6.44e-69 | 218 |
| MS.gene20276.t1 | AT2G18150 | 37.462 | 331 | 195 | 4 | 6 | 327 | 8 | 335 | 7.87e-69 | 218 |
| MS.gene20276.t1 | AT4G36430 | 39.465 | 299 | 177 | 3 | 30 | 327 | 34 | 329 | 8.70e-69 | 218 |
| MS.gene20276.t1 | AT5G15180 | 37.117 | 326 | 194 | 7 | 4 | 327 | 12 | 328 | 1.02e-68 | 218 |
| MS.gene20276.t1 | AT5G17820 | 39.297 | 313 | 177 | 5 | 12 | 324 | 63 | 362 | 2.38e-68 | 218 |
| MS.gene20276.t1 | AT2G38390 | 37.658 | 316 | 191 | 4 | 15 | 327 | 20 | 332 | 2.39e-68 | 218 |
| MS.gene20276.t1 | AT4G31760 | 39.319 | 323 | 180 | 6 | 11 | 327 | 13 | 325 | 4.97e-68 | 216 |
| MS.gene20276.t1 | AT4G33420 | 38.720 | 328 | 185 | 7 | 1 | 327 | 12 | 324 | 2.09e-67 | 214 |
| MS.gene20276.t1 | AT2G22420 | 37.578 | 322 | 191 | 5 | 6 | 327 | 7 | 318 | 2.32e-67 | 214 |
| MS.gene20276.t1 | AT1G05240 | 39.604 | 303 | 174 | 5 | 26 | 325 | 26 | 322 | 6.41e-67 | 213 |
| MS.gene20276.t1 | AT1G05250 | 39.604 | 303 | 174 | 5 | 26 | 325 | 26 | 322 | 6.41e-67 | 213 |
| MS.gene20276.t1 | AT4G33420 | 38.720 | 328 | 185 | 7 | 1 | 327 | 59 | 371 | 1.27e-66 | 214 |
| MS.gene20276.t1 | AT5G64120 | 38.384 | 297 | 174 | 5 | 31 | 327 | 40 | 327 | 4.41e-66 | 211 |
| MS.gene20276.t1 | AT1G14540 | 35.294 | 323 | 199 | 4 | 6 | 327 | 1 | 314 | 8.53e-66 | 210 |
| MS.gene20276.t1 | AT4G16270 | 39.333 | 300 | 172 | 8 | 31 | 327 | 55 | 347 | 3.25e-65 | 209 |
| MS.gene20276.t1 | AT5G19890 | 38.125 | 320 | 185 | 6 | 12 | 327 | 16 | 326 | 3.38e-65 | 209 |
| MS.gene20276.t1 | AT5G66390 | 37.386 | 329 | 194 | 5 | 4 | 324 | 5 | 329 | 1.28e-64 | 207 |
| MS.gene20276.t1 | AT5G05340 | 38.361 | 305 | 174 | 5 | 23 | 324 | 27 | 320 | 5.76e-64 | 205 |
| MS.gene20276.t1 | AT2G41480 | 37.231 | 325 | 191 | 5 | 8 | 327 | 11 | 327 | 6.52e-64 | 205 |
| MS.gene20276.t1 | AT2G39040 | 38.782 | 312 | 179 | 7 | 23 | 327 | 43 | 349 | 1.00e-63 | 206 |
| MS.gene20276.t1 | AT1G14550 | 35.866 | 329 | 200 | 5 | 1 | 327 | 1 | 320 | 3.19e-63 | 203 |
| MS.gene20276.t1 | AT3G50990 | 35.168 | 327 | 206 | 4 | 1 | 324 | 14 | 337 | 3.67e-63 | 204 |
| MS.gene20276.t1 | AT2G24800 | 37.419 | 310 | 178 | 6 | 24 | 327 | 29 | 328 | 5.12e-63 | 203 |
| MS.gene20276.t1 | AT5G39580 | 36.890 | 328 | 193 | 10 | 4 | 327 | 1 | 318 | 1.23e-62 | 202 |
| MS.gene20276.t1 | AT1G34510 | 37.461 | 323 | 182 | 8 | 4 | 324 | 1 | 305 | 1.50e-62 | 201 |
| MS.gene20276.t1 | AT5G58400 | 38.509 | 322 | 180 | 8 | 8 | 324 | 13 | 321 | 2.02e-62 | 201 |
| MS.gene20276.t1 | AT5G64110 | 36.446 | 332 | 194 | 7 | 4 | 327 | 7 | 329 | 2.56e-62 | 201 |
| MS.gene20276.t1 | AT1G49570 | 36.275 | 306 | 185 | 6 | 24 | 324 | 46 | 346 | 1.00e-61 | 200 |
| MS.gene20276.t1 | AT1G77100 | 37.003 | 327 | 187 | 8 | 6 | 325 | 2 | 316 | 2.48e-61 | 198 |
| MS.gene20276.t1 | AT4G33870 | 32.840 | 338 | 188 | 5 | 23 | 325 | 65 | 398 | 1.58e-60 | 199 |
| MS.gene20276.t1 | AT1G30870 | 38.312 | 308 | 176 | 7 | 21 | 325 | 46 | 342 | 2.69e-60 | 197 |
| MS.gene20276.t1 | AT4G26010 | 35.312 | 320 | 189 | 7 | 9 | 326 | 4 | 307 | 4.11e-60 | 195 |
| MS.gene20276.t1 | AT4G26010 | 35.312 | 320 | 189 | 7 | 9 | 326 | 32 | 335 | 7.95e-60 | 195 |
| MS.gene20276.t1 | AT1G44970 | 36.482 | 307 | 190 | 3 | 23 | 327 | 42 | 345 | 3.28e-59 | 194 |
| MS.gene20276.t1 | AT5G58390 | 37.654 | 324 | 185 | 7 | 6 | 324 | 1 | 312 | 2.09e-58 | 191 |
| MS.gene20276.t1 | AT2G43480 | 33.762 | 311 | 190 | 6 | 21 | 324 | 30 | 331 | 7.76e-58 | 190 |
| MS.gene20276.t1 | AT5G22410 | 33.435 | 329 | 202 | 9 | 1 | 324 | 5 | 321 | 1.09e-56 | 187 |
| MS.gene20276.t1 | AT5G24070 | 34.951 | 309 | 185 | 6 | 25 | 326 | 34 | 333 | 4.27e-56 | 186 |
| MS.gene20276.t1 | AT5G64100 | 35.333 | 300 | 180 | 6 | 31 | 327 | 42 | 330 | 1.21e-55 | 184 |
| MS.gene20276.t1 | AT4G25980 | 33.333 | 330 | 204 | 6 | 2 | 325 | 4 | 323 | 3.23e-55 | 183 |
| MS.gene20276.t1 | AT2G35380 | 34.940 | 332 | 198 | 8 | 9 | 327 | 8 | 334 | 1.11e-52 | 176 |
| MS.gene20276.t1 | AT1G68850 | 32.258 | 310 | 197 | 8 | 26 | 327 | 30 | 334 | 2.50e-51 | 173 |
| MS.gene20276.t1 | AT4G21960 | 31.173 | 324 | 211 | 5 | 6 | 326 | 11 | 325 | 1.77e-48 | 166 |
| MS.gene20276.t1 | AT2G37130 | 33.657 | 309 | 192 | 6 | 23 | 327 | 27 | 326 | 1.81e-47 | 163 |
| MS.gene20276.t1 | AT2G37130 | 33.993 | 303 | 187 | 6 | 29 | 327 | 2 | 295 | 5.53e-47 | 160 |
| MS.gene20276.t1 | AT3G17070 | 32.680 | 306 | 191 | 6 | 26 | 324 | 38 | 335 | 7.30e-46 | 159 |
| MS.gene20276.t1 | AT2G35380 | 35.897 | 234 | 140 | 5 | 101 | 327 | 16 | 246 | 8.77e-38 | 135 |
| MS.gene20276.t1 | AT2G24800 | 38.012 | 171 | 99 | 3 | 24 | 194 | 29 | 192 | 2.75e-31 | 118 |
| MS.gene20276.t1 | AT3G17070 | 30.303 | 264 | 168 | 7 | 68 | 324 | 18 | 272 | 1.35e-30 | 117 |
| MS.gene20276.t1 | AT5G39580 | 38.579 | 197 | 109 | 8 | 4 | 197 | 1 | 188 | 1.06e-28 | 111 |
| MS.gene20276.t1 | AT4G25980 | 38.202 | 178 | 101 | 4 | 24 | 200 | 69 | 238 | 3.90e-28 | 110 |
| MS.gene20276.t1 | AT4G32320 | 30.120 | 249 | 132 | 11 | 36 | 266 | 99 | 323 | 1.64e-17 | 82.4 |
Find 77 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGTGGTGTCTACTTAAT+TGG | 0.165416 | 5.1:+8332459 | None:intergenic |
| TCAAAGGCATGTGGAGTAAT+TGG | 0.184890 | 5.1:+8329883 | None:intergenic |
| ACAGAAATGATTGCACTTTC+AGG | 0.236725 | 5.1:-8331469 | MS.gene20276:intron |
| TCTAAAGATTCTGATGTAAA+TGG | 0.264360 | 5.1:-8331562 | MS.gene20276:CDS |
| CCAGCCAATGAAAGATTATC+AGG | 0.272485 | 5.1:+8332156 | None:intergenic |
| TGTTGCTGCCATGACCAAAT+TGG | 0.277940 | 5.1:-8329728 | MS.gene20276:CDS |
| CTTCCATGACTGCTTTGTTC+AGG | 0.296230 | 5.1:-8332339 | MS.gene20276:intron |
| GACACCAACTCGACCCAATT+TGG | 0.314627 | 5.1:+8329714 | None:intergenic |
| ACCATACTATGAGGTAGAAT+TGG | 0.315906 | 5.1:-8331605 | MS.gene20276:CDS |
| TCCAAGGGTTGCAGTTGATA+TGG | 0.330440 | 5.1:-8329908 | MS.gene20276:CDS |
| CTTGAAATTGTACACTCTAT+TGG | 0.334476 | 5.1:+8330008 | None:intergenic |
| CAGCACAAGAAACTTTATTC+TGG | 0.336699 | 5.1:+8332076 | None:intergenic |
| AACAGCATCCACAGCTGCTT+TGG | 0.345598 | 5.1:+8332107 | None:intergenic |
| AACTTAATCTTATACTTGTC+TGG | 0.357377 | 5.1:-8332523 | MS.gene20276:CDS |
| CCCAATTCTACCTCATAGTA+TGG | 0.385461 | 5.1:+8331604 | None:intergenic |
| AAAAGCATTTACTGCAGCTT+TGG | 0.387024 | 5.1:+8329783 | None:intergenic |
| GTAGAATTGGGAAGATTTGA+TGG | 0.400406 | 5.1:-8331592 | MS.gene20276:CDS |
| CTACTTCAAGAATCTACAAA+AGG | 0.426539 | 5.1:-8329854 | MS.gene20276:CDS |
| TCACCCTGATAATCTTTCAT+TGG | 0.428396 | 5.1:-8332160 | MS.gene20276:CDS |
| CCTGATAATCTTTCATTGGC+TGG | 0.430855 | 5.1:-8332156 | MS.gene20276:CDS |
| GTAGTGGTGTCTACTTAATT+GGG | 0.434010 | 5.1:+8332460 | None:intergenic |
| GTTGCTGCCATGACCAAATT+GGG | 0.437082 | 5.1:-8329727 | MS.gene20276:CDS |
| CAAAGGCATGTGGAGTAATT+GGG | 0.442444 | 5.1:+8329884 | None:intergenic |
| ACCCTTGGATCCACATCCCT+TGG | 0.454377 | 5.1:+8329922 | None:intergenic |
| AATCTTTCATTGGCTGGAGA+TGG | 0.460504 | 5.1:-8332150 | MS.gene20276:CDS |
| ATCAATGTGCCCAAGGGATG+TGG | 0.460713 | 5.1:-8329932 | MS.gene20276:CDS |
| TTGTGCTGATATTCTAGCTA+TGG | 0.463503 | 5.1:-8332061 | MS.gene20276:CDS |
| GTTTAAACAATGTATTAAGC+TGG | 0.467335 | 5.1:+8331509 | None:intergenic |
| CCATACTATGAGGTAGAATT+GGG | 0.468056 | 5.1:-8331604 | MS.gene20276:CDS |
| TTGAATCCGTGAAGAGGACT+TGG | 0.468682 | 5.1:+8329809 | None:intergenic |
| TCCATATCAACTGCAACCCT+TGG | 0.475393 | 5.1:+8329907 | None:intergenic |
| AGCTGGTTCAAGTTGAATCC+TGG | 0.480998 | 5.1:+8331526 | None:intergenic |
| GCGTAGTGTAAGTCTAATGT+AGG | 0.483647 | 5.1:+8329967 | None:intergenic |
| CTCAGACCAAGTCCTCTTCA+CGG | 0.486562 | 5.1:-8329815 | MS.gene20276:CDS |
| ATACATTGTTTAAACATCAC+GGG | 0.490569 | 5.1:-8331501 | MS.gene20276:CDS |
| TACTTCAAGAATCTACAAAA+GGG | 0.492708 | 5.1:-8329853 | MS.gene20276:CDS |
| AAGAAGAGACGTAGAGTGGC+AGG | 0.502656 | 5.1:+8332359 | None:intergenic |
| CCCTTGGATCCACATCCCTT+GGG | 0.505679 | 5.1:+8329923 | None:intergenic |
| AATACATTGTTTAAACATCA+CGG | 0.513218 | 5.1:-8331502 | MS.gene20276:CDS |
| GTGTCAAGAATTCACACAAT+GGG | 0.518226 | 5.1:-8329696 | MS.gene20276:CDS |
| AACCCGTGATGTTATTGCAT+TGG | 0.520448 | 5.1:-8332037 | MS.gene20276:intron |
| TTCAAGTTGAATCCTGGCTC+AGG | 0.520683 | 5.1:+8331532 | None:intergenic |
| CCAATTACACAGGGTTGTGA+TGG | 0.520878 | 5.1:-8332228 | MS.gene20276:intron |
| TTACCTGAACAAAGCAGTCA+TGG | 0.532969 | 5.1:+8332336 | None:intergenic |
| AATGGAAAACTTCCTGAGCC+AGG | 0.533024 | 5.1:-8331544 | MS.gene20276:CDS |
| TCCCTCTCTGCTCTATTATG+TGG | 0.534283 | 5.1:+8332183 | None:intergenic |
| TCTGTAGGTGCTCACACCGT+TGG | 0.536753 | 5.1:-8330054 | MS.gene20276:intron |
| GAAACTTTATTCTGGCAAAG+AGG | 0.538555 | 5.1:+8332084 | None:intergenic |
| GGTCATGGCAGCAACAAAGT+TGG | 0.538768 | 5.1:+8329735 | None:intergenic |
| CAAGAATCTACAAAAGGGGA+AGG | 0.541599 | 5.1:-8329848 | MS.gene20276:CDS |
| AATTAAAATCAATGTGCCCA+AGG | 0.543156 | 5.1:-8329939 | MS.gene20276:CDS |
| TAGAATTGGGAAGATTTGAT+GGG | 0.544238 | 5.1:-8331591 | MS.gene20276:CDS |
| AACCAATGCAATAACATCAC+GGG | 0.563893 | 5.1:+8332035 | None:intergenic |
| GCCCAAGGGATGTGGATCCA+AGG | 0.566912 | 5.1:-8329924 | MS.gene20276:CDS |
| CTTGAAGTAGACATTATCAA+AGG | 0.575943 | 5.1:+8329867 | None:intergenic |
| TGGATCTTGAATCCGTGAAG+AGG | 0.581662 | 5.1:+8329803 | None:intergenic |
| ACACAATGGGAACATTCGTA+CGG | 0.590337 | 5.1:-8329683 | MS.gene20276:CDS |
| GCCACATAATAGAGCAGAGA+GGG | 0.597026 | 5.1:-8332184 | MS.gene20276:CDS |
| CTACTTAATTGGGCATGAGT+AGG | 0.598762 | 5.1:+8332470 | None:intergenic |
| CCCAAGGGATGTGGATCCAA+GGG | 0.601578 | 5.1:-8329923 | MS.gene20276:CDS |
| ATTAAAATCAATGTGCCCAA+GGG | 0.604041 | 5.1:-8329938 | MS.gene20276:CDS |
| CGTGAAGAGGACTTGGTCTG+AGG | 0.605078 | 5.1:+8329816 | None:intergenic |
| AAACCAATGCAATAACATCA+CGG | 0.605408 | 5.1:+8332034 | None:intergenic |
| AAGAATCTACAAAAGGGGAA+GGG | 0.605692 | 5.1:-8329847 | MS.gene20276:CDS |
| TATACAAGCCAAAGCAGCTG+TGG | 0.607386 | 5.1:-8332115 | MS.gene20276:CDS |
| AACTCGACCCAATTTGGTCA+TGG | 0.625747 | 5.1:+8329720 | None:intergenic |
| ATGACCAAATTGGGTCGAGT+TGG | 0.628391 | 5.1:-8329718 | MS.gene20276:CDS |
| ACTTCAAGAATCTACAAAAG+GGG | 0.631131 | 5.1:-8329852 | MS.gene20276:CDS |
| GGCAGGAGGACCATACTATG+AGG | 0.631628 | 5.1:-8331614 | MS.gene20276:CDS |
| CGTAGTGTAAGTCTAATGTA+GGG | 0.631745 | 5.1:+8329968 | None:intergenic |
| CAGCCAATGAAAGATTATCA+GGG | 0.640554 | 5.1:+8332157 | None:intergenic |
| ATGGAAGAAGAGACGTAGAG+TGG | 0.643216 | 5.1:+8332355 | None:intergenic |
| TAGGACATGAATTCTTGTAG+TGG | 0.645111 | 5.1:+8332444 | None:intergenic |
| TAGACATTATCAAAGGCATG+TGG | 0.660951 | 5.1:+8329874 | None:intergenic |
| GGTGTCAAGAATTCACACAA+TGG | 0.671153 | 5.1:-8329697 | MS.gene20276:CDS |
| GTTGCAATGTGAGAATCCAA+CGG | 0.699363 | 5.1:+8330038 | None:intergenic |
| CGCCACATAATAGAGCAGAG+AGG | 0.791379 | 5.1:-8332185 | MS.gene20276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATAGATAAAACTT+TGG | - | chr5.1:8332088-8332107 | MS.gene20276:CDS | 10.0% |
| !! | AAATAAAATAATTTGATGAG+AGG | + | chr5.1:8331453-8331472 | None:intergenic | 15.0% |
| !! | AGAAAAATAAAGATATTGAA+GGG | - | chr5.1:8331970-8331989 | MS.gene20276:intron | 15.0% |
| !! | AGTTTAAAAATTAGATTTGA+TGG | - | chr5.1:8330404-8330423 | MS.gene20276:intron | 15.0% |
| !! | GAAAATGTAACATTTATTTA+TGG | + | chr5.1:8329919-8329938 | None:intergenic | 15.0% |
| !! | TAGAAAAATAAAGATATTGA+AGG | - | chr5.1:8331969-8331988 | MS.gene20276:intron | 15.0% |
| !! | AATACATTGTTTAAACATCA+CGG | - | chr5.1:8330694-8330713 | MS.gene20276:intron | 20.0% |
| !! | AGAAAAAAAATGATACACTA+AGG | - | chr5.1:8331244-8331263 | MS.gene20276:intron | 20.0% |
| !! | ATTAAAGAACATCAAAGTTA+AGG | + | chr5.1:8330935-8330954 | None:intergenic | 20.0% |
| !! | GAAAAAAAATGATACACTAA+GGG | - | chr5.1:8331245-8331264 | MS.gene20276:intron | 20.0% |
| !! | TAAACTCAGTTTAATAATTG+AGG | + | chr5.1:8331512-8331531 | None:intergenic | 20.0% |
| !! | TAACTTTGATGTTCTTTAAT+AGG | - | chr5.1:8330935-8330954 | MS.gene20276:intron | 20.0% |
| !! | TAGGATAATTAAAATAGTCA+CGG | + | chr5.1:8330307-8330326 | None:intergenic | 20.0% |
| !! | TCTAATTATTAGAATAGACT+TGG | - | chr5.1:8330438-8330457 | MS.gene20276:intron | 20.0% |
| !! | TGATATAATAACAACAACAT+AGG | - | chr5.1:8331608-8331627 | MS.gene20276:CDS | 20.0% |
| !!! | AATGTGAAATTTGAATTTTC+AGG | - | chr5.1:8330561-8330580 | MS.gene20276:intron | 20.0% |
| !!! | ACACTTTTCCAATTAATTAA+AGG | - | chr5.1:8330775-8330794 | MS.gene20276:intron | 20.0% |
| !!! | AGTCAAAAGTAATTTTAAAC+AGG | - | chr5.1:8330803-8330822 | MS.gene20276:intron | 20.0% |
| !!! | TAAAGTTACTTTGTAGTATA+TGG | + | chr5.1:8331900-8331919 | None:intergenic | 20.0% |
| !!! | TCAATTACATGCATTTTATT+TGG | - | chr5.1:8329889-8329908 | MS.gene20276:CDS | 20.0% |
| !!! | TGTTTAAAATTACTTTTGAC+TGG | + | chr5.1:8330804-8330823 | None:intergenic | 20.0% |
| !!! | TTGATTATTTTTGAAAGTAC+AGG | - | chr5.1:8331411-8331430 | MS.gene20276:intron | 20.0% |
| ! | AACTTAATCTTATACTTGTC+TGG | - | chr5.1:8329673-8329692 | MS.gene20276:CDS | 25.0% |
| ! | ACGACTTGACATTATTTATA+TGG | - | chr5.1:8331035-8331054 | MS.gene20276:intron | 25.0% |
| ! | AGATATCAAAGAGAGAAATA+GGG | + | chr5.1:8331810-8331829 | None:intergenic | 25.0% |
| ! | AGTAGATTTGATGTATTGTT+TGG | - | chr5.1:8331349-8331368 | MS.gene20276:intron | 25.0% |
| ! | ATACATTGTTTAAACATCAC+GGG | - | chr5.1:8330695-8330714 | MS.gene20276:intron | 25.0% |
| ! | ATCAAAGTTAAGGACAAATT+TGG | + | chr5.1:8330925-8330944 | None:intergenic | 25.0% |
| ! | GTTTAAACAATGTATTAAGC+TGG | + | chr5.1:8330690-8330709 | None:intergenic | 25.0% |
| ! | TACTTCAAGAATCTACAAAA+GGG | - | chr5.1:8332343-8332362 | MS.gene20276:CDS | 25.0% |
| ! | TATGATATTCCAATTACACA+GGG | - | chr5.1:8329959-8329978 | MS.gene20276:CDS | 25.0% |
| ! | TCTAAAGATTCTGATGTAAA+TGG | - | chr5.1:8330634-8330653 | MS.gene20276:intron | 25.0% |
| ! | TTACTCGTTATAATAGTGTT+TGG | + | chr5.1:8330487-8330506 | None:intergenic | 25.0% |
| !! | ATTCAGTCTTATAACTAACT+AGG | - | chr5.1:8330524-8330543 | MS.gene20276:intron | 25.0% |
| !!! | ATGTGACTTTTTTTTTCCTT+GGG | + | chr5.1:8331586-8331605 | None:intergenic | 25.0% |
| !!! | CAAAGAAAGTTGATATCTTT+AGG | + | chr5.1:8330326-8330345 | None:intergenic | 25.0% |
| !!! | TTTGATGAGAGGATTTTTTA+AGG | + | chr5.1:8331442-8331461 | None:intergenic | 25.0% |
| AAACCAATGCAATAACATCA+CGG | + | chr5.1:8330165-8330184 | None:intergenic | 30.0% | |
| AAGACTGAATTAACTTTCAC+AGG | + | chr5.1:8330514-8330533 | None:intergenic | 30.0% | |
| AATTAAAATCAATGTGCCCA+AGG | - | chr5.1:8332257-8332276 | MS.gene20276:intron | 30.0% | |
| ACTGGCATCCTTTAATTAAT+TGG | + | chr5.1:8330786-8330805 | None:intergenic | 30.0% | |
| ACTTCAAGAATCTACAAAAG+GGG | - | chr5.1:8332344-8332363 | MS.gene20276:CDS | 30.0% | |
| AGACTGAATTAACTTTCACA+GGG | + | chr5.1:8330513-8330532 | None:intergenic | 30.0% | |
| ATAATTAATGGTTGAACCCA+AGG | - | chr5.1:8331567-8331586 | MS.gene20276:CDS | 30.0% | |
| ATTAAAATCAATGTGCCCAA+GGG | - | chr5.1:8332258-8332277 | MS.gene20276:intron | 30.0% | |
| CTACTTCAAGAATCTACAAA+AGG | - | chr5.1:8332342-8332361 | MS.gene20276:CDS | 30.0% | |
| CTATGATATTCCAATTACAC+AGG | - | chr5.1:8329958-8329977 | MS.gene20276:CDS | 30.0% | |
| CTTGAAATTGTACACTCTAT+TGG | + | chr5.1:8332191-8332210 | None:intergenic | 30.0% | |
| CTTGAAGTAGACATTATCAA+AGG | + | chr5.1:8332332-8332351 | None:intergenic | 30.0% | |
| GAAAATAAGAAGAGAGAAAG+AGG | - | chr5.1:8331286-8331305 | MS.gene20276:intron | 30.0% | |
| GAGATATCAAAGAGAGAAAT+AGG | + | chr5.1:8331811-8331830 | None:intergenic | 30.0% | |
| GATATCAAAGAGAGAAATAG+GGG | + | chr5.1:8331809-8331828 | None:intergenic | 30.0% | |
| GCACTACATCACAAATTAAA+GGG | - | chr5.1:8331637-8331656 | MS.gene20276:intron | 30.0% | |
| TAGAATTGGGAAGATTTGAT+GGG | - | chr5.1:8330605-8330624 | MS.gene20276:intron | 30.0% | |
| TCACAAATTAAAGGGTGAAA+AGG | - | chr5.1:8331645-8331664 | MS.gene20276:intron | 30.0% | |
| TGCACTACATCACAAATTAA+AGG | - | chr5.1:8331636-8331655 | MS.gene20276:intron | 30.0% | |
| ! | AACTAGCATTTTCTCTTGTT+TGG | + | chr5.1:8331783-8331802 | None:intergenic | 30.0% |
| ! | CTGACAATGTTTTCAACATT+AGG | + | chr5.1:8329774-8329793 | None:intergenic | 30.0% |
| !! | TGAAATTTGAATTTTCAGGC+AGG | - | chr5.1:8330565-8330584 | MS.gene20276:intron | 30.0% |
| !!! | CATGTGACTTTTTTTTTCCT+TGG | + | chr5.1:8331587-8331606 | None:intergenic | 30.0% |
| AACCAATGCAATAACATCAC+GGG | + | chr5.1:8330164-8330183 | None:intergenic | 35.0% | |
| AAGAATCTACAAAAGGGGAA+GGG | - | chr5.1:8332349-8332368 | MS.gene20276:CDS | 35.0% | |
| AAGCATCTGAGTTAGATCTT+GGG | - | chr5.1:8331923-8331942 | MS.gene20276:intron | 35.0% | |
| ACAGAAATGATTGCACTTTC+AGG | - | chr5.1:8330727-8330746 | MS.gene20276:intron | 35.0% | |
| ACCATACTATGAGGTAGAAT+TGG | - | chr5.1:8330591-8330610 | MS.gene20276:intron | 35.0% | |
| ACCCTCAAACAGTATAATGA+GGG | + | chr5.1:8330876-8330895 | None:intergenic | 35.0% | |
| ACCCTCATTATACTGTTTGA+GGG | - | chr5.1:8330872-8330891 | MS.gene20276:intron | 35.0% | |
| CAGCACAAGAAACTTTATTC+TGG | + | chr5.1:8330123-8330142 | None:intergenic | 35.0% | |
| CAGCCAATGAAAGATTATCA+GGG | + | chr5.1:8330042-8330061 | None:intergenic | 35.0% | |
| CCATACTATGAGGTAGAATT+GGG | - | chr5.1:8330592-8330611 | MS.gene20276:intron | 35.0% | |
| CGTAGTGTAAGTCTAATGTA+GGG | + | chr5.1:8332231-8332250 | None:intergenic | 35.0% | |
| GAAACTTTATTCTGGCAAAG+AGG | + | chr5.1:8330115-8330134 | None:intergenic | 35.0% | |
| GAATCATGTCAATCAACACT+AGG | + | chr5.1:8332116-8332135 | None:intergenic | 35.0% | |
| GTAGAATTGGGAAGATTTGA+TGG | - | chr5.1:8330604-8330623 | MS.gene20276:intron | 35.0% | |
| GTAGTGGTGTCTACTTAATT+GGG | + | chr5.1:8329739-8329758 | None:intergenic | 35.0% | |
| GTGTCAAGAATTCACACAAT+GGG | - | chr5.1:8332500-8332519 | MS.gene20276:CDS | 35.0% | |
| TACCCTCAAACAGTATAATG+AGG | + | chr5.1:8330877-8330896 | None:intergenic | 35.0% | |
| TAGGACATGAATTCTTGTAG+TGG | + | chr5.1:8329755-8329774 | None:intergenic | 35.0% | |
| TCAATATGTCTCATGCATGT+TGG | + | chr5.1:8330831-8330850 | None:intergenic | 35.0% | |
| TCACCCTGATAATCTTTCAT+TGG | - | chr5.1:8330036-8330055 | MS.gene20276:CDS | 35.0% | |
| TGTAGTGGTGTCTACTTAAT+TGG | + | chr5.1:8329740-8329759 | None:intergenic | 35.0% | |
| ! | AAGAGAGACAAATCTGAGAT+GGG | + | chr5.1:8331742-8331761 | None:intergenic | 35.0% |
| ! | GTGCACTTTTACACTTTGTT+TGG | + | chr5.1:8331856-8331875 | None:intergenic | 35.0% |
| ! | TAGACATTATCAAAGGCATG+TGG | + | chr5.1:8332325-8332344 | None:intergenic | 35.0% |
| ! | TATACTGTTTGAGGGTATGA+GGG | - | chr5.1:8330880-8330899 | MS.gene20276:intron | 35.0% |
| ! | TTATACTGTTTGAGGGTATG+AGG | - | chr5.1:8330879-8330898 | MS.gene20276:intron | 35.0% |
| ! | TTGTGCTGATATTCTAGCTA+TGG | - | chr5.1:8330135-8330154 | MS.gene20276:intron | 35.0% |
| !! | AAAAGCATTTACTGCAGCTT+TGG | + | chr5.1:8332416-8332435 | None:intergenic | 35.0% |
| !! | AATTTGAATTTTCAGGCAGG+AGG | - | chr5.1:8330568-8330587 | MS.gene20276:intron | 35.0% |
| !! | GTAGTATTTCTAGTGGTTGT+CGG | - | chr5.1:8331992-8332011 | MS.gene20276:intron | 35.0% |
| !! | TTGAAGGGTAGTATTTCTAG+TGG | - | chr5.1:8331985-8332004 | MS.gene20276:intron | 35.0% |
| AAAGAGGTGAGAGAGAGTAA+GGG | - | chr5.1:8331302-8331321 | MS.gene20276:intron | 40.0% | |
| AACCCGTGATGTTATTGCAT+TGG | - | chr5.1:8330159-8330178 | MS.gene20276:intron | 40.0% | |
| ACACAATGGGAACATTCGTA+CGG | - | chr5.1:8332513-8332532 | MS.gene20276:CDS | 40.0% | |
| ACATGATTCATTCCCTCTGT+AGG | - | chr5.1:8332127-8332146 | MS.gene20276:CDS | 40.0% | |
| CAAGAATCTACAAAAGGGGA+AGG | - | chr5.1:8332348-8332367 | MS.gene20276:CDS | 40.0% | |
| CAAGCATCTGAGTTAGATCT+TGG | - | chr5.1:8331922-8331941 | MS.gene20276:intron | 40.0% | |
| CCAGCCAATGAAAGATTATC+AGG | + | chr5.1:8330043-8330062 | None:intergenic | 40.0% | |
| CCCAATTCTACCTCATAGTA+TGG | + | chr5.1:8330595-8330614 | None:intergenic | 40.0% | |
| CCTGATAATCTTTCATTGGC+TGG | - | chr5.1:8330040-8330059 | MS.gene20276:CDS | 40.0% | |
| CTACTTAATTGGGCATGAGT+AGG | + | chr5.1:8329729-8329748 | None:intergenic | 40.0% | |
| GAAGAGAGACAAATCTGAGA+TGG | + | chr5.1:8331743-8331762 | None:intergenic | 40.0% | |
| GACCCTCATTATACTGTTTG+AGG | - | chr5.1:8330871-8330890 | MS.gene20276:intron | 40.0% | |
| GCGTAGTGTAAGTCTAATGT+AGG | + | chr5.1:8332232-8332251 | None:intergenic | 40.0% | |
| GGAGAGAAGAAAAACCATGT+GGG | - | chr5.1:8331715-8331734 | MS.gene20276:intron | 40.0% | |
| GGTGTCAAGAATTCACACAA+TGG | - | chr5.1:8332499-8332518 | MS.gene20276:CDS | 40.0% | |
| GTTGCAATGTGAGAATCCAA+CGG | + | chr5.1:8332161-8332180 | None:intergenic | 40.0% | |
| TAATGAGGGTCACATAGCAT+AGG | + | chr5.1:8330862-8330881 | None:intergenic | 40.0% | |
| TGGAGAGAAGAAAAACCATG+TGG | - | chr5.1:8331714-8331733 | MS.gene20276:intron | 40.0% | |
| TTACCTGAACAAAGCAGTCA+TGG | + | chr5.1:8329863-8329882 | None:intergenic | 40.0% | |
| ! | AATCTTTCATTGGCTGGAGA+TGG | - | chr5.1:8330046-8330065 | MS.gene20276:CDS | 40.0% |
| ! | AGAGAGACAAATCTGAGATG+GGG | + | chr5.1:8331741-8331760 | None:intergenic | 40.0% |
| ! | CAAAGGCATGTGGAGTAATT+GGG | + | chr5.1:8332315-8332334 | None:intergenic | 40.0% |
| ! | GGATCATCTAGAACAGCATT+AGG | - | chr5.1:8330459-8330478 | MS.gene20276:intron | 40.0% |
| ! | TCAAAGGCATGTGGAGTAAT+TGG | + | chr5.1:8332316-8332335 | None:intergenic | 40.0% |
| !! | CTAGACTTTCTCTGCTGTTT+TGG | - | chr5.1:8331694-8331713 | MS.gene20276:intron | 40.0% |
| AACTCGACCCAATTTGGTCA+TGG | + | chr5.1:8332479-8332498 | None:intergenic | 45.0% | |
| AATGGAAAACTTCCTGAGCC+AGG | - | chr5.1:8330652-8330671 | MS.gene20276:intron | 45.0% | |
| AGTGTAAACCGTAAACCACG+CGG | + | chr5.1:8330760-8330779 | None:intergenic | 45.0% | |
| ATGACCAAATTGGGTCGAGT+TGG | - | chr5.1:8332478-8332497 | MS.gene20276:CDS | 45.0% | |
| ATGGAAGAAGAGACGTAGAG+TGG | + | chr5.1:8329844-8329863 | None:intergenic | 45.0% | |
| CCAATTACACAGGGTTGTGA+TGG | - | chr5.1:8329968-8329987 | MS.gene20276:CDS | 45.0% | |
| CCATCACAACCCTGTGTAAT+TGG | + | chr5.1:8329971-8329990 | None:intergenic | 45.0% | |
| GAAAGAGGTGAGAGAGAGTA+AGG | - | chr5.1:8331301-8331320 | MS.gene20276:intron | 45.0% | |
| GAGTAAGGGAAGAGAGAAAG+AGG | - | chr5.1:8331316-8331335 | MS.gene20276:intron | 45.0% | |
| GCCACATAATAGAGCAGAGA+GGG | - | chr5.1:8330012-8330031 | MS.gene20276:CDS | 45.0% | |
| GGTCACATAGCATAGGAACA+CGG | + | chr5.1:8330855-8330874 | None:intergenic | 45.0% | |
| GTTGCTGCCATGACCAAATT+GGG | - | chr5.1:8332469-8332488 | MS.gene20276:CDS | 45.0% | |
| TATACAAGCCAAAGCAGCTG+TGG | - | chr5.1:8330081-8330100 | MS.gene20276:intron | 45.0% | |
| TCCATATCAACTGCAACCCT+TGG | + | chr5.1:8332292-8332311 | None:intergenic | 45.0% | |
| TCCCTCTCTGCTCTATTATG+TGG | + | chr5.1:8330016-8330035 | None:intergenic | 45.0% | |
| TGGATCTTGAATCCGTGAAG+AGG | + | chr5.1:8332396-8332415 | None:intergenic | 45.0% | |
| TGTTGCTGCCATGACCAAAT+TGG | - | chr5.1:8332468-8332487 | MS.gene20276:CDS | 45.0% | |
| TTGAATCCGTGAAGAGGACT+TGG | + | chr5.1:8332390-8332409 | None:intergenic | 45.0% | |
| ! | CTTCCATGACTGCTTTGTTC+AGG | - | chr5.1:8329857-8329876 | MS.gene20276:CDS | 45.0% |
| ! | GTTTGAGGGTATGAGGGTAT+TGG | - | chr5.1:8330886-8330905 | MS.gene20276:intron | 45.0% |
| ! | TCCAAGGGTTGCAGTTGATA+TGG | - | chr5.1:8332288-8332307 | MS.gene20276:intron | 45.0% |
| ! | TGATACACTAAGGGTGCGTT+TGG | - | chr5.1:8331254-8331273 | MS.gene20276:intron | 45.0% |
| !! | AGCTGGTTCAAGTTGAATCC+TGG | + | chr5.1:8330673-8330692 | None:intergenic | 45.0% |
| !! | TTCAAGTTGAATCCTGGCTC+AGG | + | chr5.1:8330667-8330686 | None:intergenic | 45.0% |
| !! | TTAATCAATAAAATAATTAA+TGG | - | chr5.1:8331555-8331574 | MS.gene20276:CDS | 5.0% |
| !!! | ATTATTTTACATTTATAAAT+TGG | + | chr5.1:8332026-8332045 | None:intergenic | 5.0% |
| AACAGCATCCACAGCTGCTT+TGG | + | chr5.1:8330092-8330111 | None:intergenic | 50.0% | |
| AAGAAGAGACGTAGAGTGGC+AGG | + | chr5.1:8329840-8329859 | None:intergenic | 50.0% | |
| ATCAATGTGCCCAAGGGATG+TGG | - | chr5.1:8332264-8332283 | MS.gene20276:intron | 50.0% | |
| CGCCACATAATAGAGCAGAG+AGG | - | chr5.1:8330011-8330030 | MS.gene20276:CDS | 50.0% | |
| CTCAGACCAAGTCCTCTTCA+CGG | - | chr5.1:8332381-8332400 | MS.gene20276:CDS | 50.0% | |
| GACACCAACTCGACCCAATT+TGG | + | chr5.1:8332485-8332504 | None:intergenic | 50.0% | |
| GGTCATGGCAGCAACAAAGT+TGG | + | chr5.1:8332464-8332483 | None:intergenic | 50.0% | |
| AACGGTGTGAGCACCTACAG+AGG | + | chr5.1:8332143-8332162 | None:intergenic | 55.0% | |
| ACCCTTGGATCCACATCCCT+TGG | + | chr5.1:8332277-8332296 | None:intergenic | 55.0% | |
| ACGGTGTGAGCACCTACAGA+GGG | + | chr5.1:8332142-8332161 | None:intergenic | 55.0% | |
| CCCAAGGGATGTGGATCCAA+GGG | - | chr5.1:8332273-8332292 | MS.gene20276:intron | 55.0% | |
| CCCTTGGATCCACATCCCTT+GGG | + | chr5.1:8332276-8332295 | None:intergenic | 55.0% | |
| GGCAGGAGGACCATACTATG+AGG | - | chr5.1:8330582-8330601 | MS.gene20276:intron | 55.0% | |
| GTAATGCGCCGCGTGGTTTA+CGG | - | chr5.1:8330749-8330768 | MS.gene20276:intron | 55.0% | |
| TCTGTAGGTGCTCACACCGT+TGG | - | chr5.1:8332142-8332161 | MS.gene20276:CDS | 55.0% | |
| ! | AATCTGAGATGGGGCCCACA+TGG | + | chr5.1:8331732-8331751 | None:intergenic | 55.0% |
| ! | CGTGAAGAGGACTTGGTCTG+AGG | + | chr5.1:8332383-8332402 | None:intergenic | 55.0% |
| GCCCAAGGGATGTGGATCCA+AGG | - | chr5.1:8332272-8332291 | MS.gene20276:intron | 60.0% | |
| ! | CTTTCAGGTAATGCGCCGCG+TGG | - | chr5.1:8330742-8330761 | MS.gene20276:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8329666 | 8332552 | 8329666 | ID=MS.gene20276 |
| chr5.1 | mRNA | 8329666 | 8332552 | 8329666 | ID=MS.gene20276.t1;Parent=MS.gene20276 |
| chr5.1 | exon | 8332340 | 8332552 | 8332340 | ID=MS.gene20276.t1.exon1;Parent=MS.gene20276.t1 |
| chr5.1 | CDS | 8332340 | 8332552 | 8332340 | ID=cds.MS.gene20276.t1;Parent=MS.gene20276.t1 |
| chr5.1 | exon | 8332038 | 8332238 | 8332038 | ID=MS.gene20276.t1.exon2;Parent=MS.gene20276.t1 |
| chr5.1 | CDS | 8332038 | 8332238 | 8332038 | ID=cds.MS.gene20276.t1;Parent=MS.gene20276.t1 |
| chr5.1 | exon | 8331470 | 8331635 | 8331470 | ID=MS.gene20276.t1.exon3;Parent=MS.gene20276.t1 |
| chr5.1 | CDS | 8331470 | 8331635 | 8331470 | ID=cds.MS.gene20276.t1;Parent=MS.gene20276.t1 |
| chr5.1 | exon | 8329666 | 8330069 | 8329666 | ID=MS.gene20276.t1.exon4;Parent=MS.gene20276.t1 |
| chr5.1 | CDS | 8329666 | 8330069 | 8329666 | ID=cds.MS.gene20276.t1;Parent=MS.gene20276.t1 |
| Gene Sequence |
| Protein sequence |
