Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09575.t1 | AAB41812.1 | 98.8 | 325 | 4 | 0 | 4 | 328 | 1 | 325 | 1.30E-183 | 652.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09575.t1 | Q9SZE7 | 64.0 | 325 | 117 | 0 | 1 | 325 | 1 | 325 | 1.3e-118 | 427.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09575.t1 | Q40367 | 98.8 | 325 | 4 | 0 | 4 | 328 | 1 | 325 | 9.7e-184 | 652.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049190 | MS.gene09575 | 0.848514 | 5.84E-60 | -1.69E-46 |
MS.gene049328 | MS.gene09575 | 0.808882 | 2.49E-50 | -1.69E-46 |
MS.gene049418 | MS.gene09575 | 0.83848 | 2.81E-57 | -1.69E-46 |
MS.gene051018 | MS.gene09575 | 0.802421 | 5.66E-49 | -1.69E-46 |
MS.gene051279 | MS.gene09575 | 0.816644 | 4.97E-52 | -1.69E-46 |
MS.gene05157 | MS.gene09575 | 0.808865 | 2.51E-50 | -1.69E-46 |
MS.gene051648 | MS.gene09575 | 0.800332 | 1.51E-48 | -1.69E-46 |
MS.gene053122 | MS.gene09575 | 0.826011 | 3.43E-54 | -1.69E-46 |
MS.gene053144 | MS.gene09575 | 0.84549 | 3.93E-59 | -1.69E-46 |
MS.gene053536 | MS.gene09575 | 0.801636 | 8.20E-49 | -1.69E-46 |
MS.gene053581 | MS.gene09575 | 0.803313 | 3.70E-49 | -1.69E-46 |
MS.gene054584 | MS.gene09575 | 0.853727 | 1.97E-61 | -1.69E-46 |
MS.gene055465 | MS.gene09575 | 0.828414 | 9.11E-55 | -1.69E-46 |
MS.gene055466 | MS.gene09575 | 0.822696 | 2.06E-53 | -1.69E-46 |
MS.gene055468 | MS.gene09575 | 0.809255 | 2.07E-50 | -1.69E-46 |
MS.gene055537 | MS.gene09575 | 0.826302 | 2.92E-54 | -1.69E-46 |
MS.gene055580 | MS.gene09575 | -0.841805 | 3.80E-58 | -1.69E-46 |
MS.gene055890 | MS.gene09575 | 0.804789 | 1.83E-49 | -1.69E-46 |
MS.gene056005 | MS.gene09575 | 0.801837 | 7.46E-49 | -1.69E-46 |
MS.gene056043 | MS.gene09575 | -0.804967 | 1.68E-49 | -1.69E-46 |
MS.gene056228 | MS.gene09575 | 0.820562 | 6.42E-53 | -1.69E-46 |
MS.gene057082 | MS.gene09575 | 0.816961 | 4.22E-52 | -1.69E-46 |
MS.gene05894 | MS.gene09575 | 0.833004 | 6.84E-56 | -1.69E-46 |
MS.gene060519 | MS.gene09575 | 0.844731 | 6.30E-59 | -1.69E-46 |
MS.gene060587 | MS.gene09575 | 0.813787 | 2.14E-51 | -1.69E-46 |
MS.gene060603 | MS.gene09575 | 0.823819 | 1.13E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene09575 | MS.gene35795 | PPI |
MS.gene09575 | MS.gene44482 | PPI |
MS.gene53782 | MS.gene09575 | PPI |
MS.gene48733 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene80170 | PPI |
MS.gene67066 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene48740 | PPI |
MS.gene35931 | MS.gene09575 | PPI |
MS.gene20276 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene88144 | PPI |
MS.gene043054 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene32635 | PPI |
MS.gene09575 | MS.gene48746 | PPI |
MS.gene09575 | MS.gene88044 | PPI |
MS.gene09575 | MS.gene45786 | PPI |
MS.gene029047 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene35853 | PPI |
MS.gene014924 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene071284 | PPI |
MS.gene09575 | MS.gene015231 | PPI |
MS.gene060053 | MS.gene09575 | PPI |
MS.gene32715 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene067613 | PPI |
MS.gene09575 | MS.gene040455 | PPI |
MS.gene014836 | MS.gene09575 | PPI |
MS.gene09575 | MS.gene57204 | PPI |
MS.gene09575 | MS.gene043043 | PPI |
MS.gene09575 | MS.gene072888 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09575.t1 | MTR_5g016010 | 96.646 | 328 | 11 | 0 | 1 | 328 | 1 | 328 | 0.0 | 657 |
MS.gene09575.t1 | MTR_4g095450 | 71.037 | 328 | 90 | 1 | 1 | 328 | 1 | 323 | 5.16e-179 | 498 |
MS.gene09575.t1 | MTR_4g127670 | 67.110 | 301 | 96 | 2 | 26 | 326 | 23 | 320 | 2.85e-151 | 427 |
MS.gene09575.t1 | MTR_1g009750 | 61.006 | 318 | 120 | 3 | 12 | 328 | 13 | 327 | 1.77e-142 | 405 |
MS.gene09575.t1 | MTR_7g029030 | 58.307 | 319 | 126 | 3 | 8 | 326 | 6 | 317 | 1.23e-128 | 370 |
MS.gene09575.t1 | MTR_1g009750 | 55.975 | 318 | 119 | 4 | 12 | 328 | 13 | 310 | 2.92e-126 | 364 |
MS.gene09575.t1 | MTR_8g062780 | 43.789 | 322 | 177 | 3 | 6 | 325 | 1 | 320 | 1.33e-89 | 271 |
MS.gene09575.t1 | MTR_0286s0010 | 42.679 | 321 | 178 | 4 | 10 | 328 | 17 | 333 | 4.50e-85 | 260 |
MS.gene09575.t1 | MTR_6g008075 | 42.679 | 321 | 178 | 4 | 10 | 328 | 17 | 333 | 4.50e-85 | 260 |
MS.gene09575.t1 | MTR_3g092990 | 42.947 | 319 | 178 | 3 | 11 | 328 | 10 | 325 | 4.53e-84 | 257 |
MS.gene09575.t1 | MTR_1g090760 | 41.956 | 317 | 177 | 4 | 14 | 325 | 12 | 326 | 3.67e-83 | 255 |
MS.gene09575.t1 | MTR_4g087965 | 42.810 | 306 | 169 | 4 | 26 | 327 | 41 | 344 | 2.62e-81 | 251 |
MS.gene09575.t1 | MTR_1g101830 | 41.641 | 329 | 177 | 8 | 2 | 328 | 6 | 321 | 4.76e-79 | 244 |
MS.gene09575.t1 | MTR_2g029860 | 41.772 | 316 | 178 | 4 | 16 | 328 | 17 | 329 | 1.71e-78 | 244 |
MS.gene09575.t1 | MTR_2g029815 | 41.141 | 333 | 187 | 5 | 1 | 328 | 1 | 329 | 1.72e-78 | 243 |
MS.gene09575.t1 | MTR_2g029850 | 41.141 | 333 | 187 | 5 | 1 | 328 | 1 | 329 | 9.59e-78 | 241 |
MS.gene09575.t1 | MTR_5g022870 | 41.538 | 325 | 175 | 7 | 7 | 328 | 3 | 315 | 2.43e-77 | 239 |
MS.gene09575.t1 | MTR_2g029820 | 41.141 | 333 | 187 | 5 | 1 | 328 | 1 | 329 | 4.00e-77 | 240 |
MS.gene09575.t1 | MTR_1g025980 | 40.248 | 323 | 179 | 7 | 8 | 328 | 7 | 317 | 6.49e-76 | 236 |
MS.gene09575.t1 | MTR_8g075100 | 42.532 | 308 | 164 | 5 | 23 | 328 | 22 | 318 | 1.52e-75 | 235 |
MS.gene09575.t1 | MTR_2g029800 | 39.458 | 332 | 194 | 4 | 1 | 328 | 1 | 329 | 6.89e-75 | 234 |
MS.gene09575.t1 | MTR_3g092990 | 41.693 | 319 | 171 | 5 | 11 | 328 | 10 | 314 | 1.31e-74 | 233 |
MS.gene09575.t1 | MTR_1g077000 | 39.222 | 334 | 183 | 7 | 1 | 328 | 7 | 326 | 2.93e-74 | 232 |
MS.gene09575.t1 | MTR_2g088770 | 39.875 | 321 | 186 | 5 | 10 | 328 | 9 | 324 | 6.53e-74 | 231 |
MS.gene09575.t1 | MTR_2g029750 | 39.640 | 333 | 192 | 6 | 1 | 328 | 1 | 329 | 9.16e-74 | 231 |
MS.gene09575.t1 | MTR_2g084020 | 38.906 | 329 | 188 | 5 | 1 | 328 | 1 | 317 | 2.41e-73 | 229 |
MS.gene09575.t1 | MTR_4g046713 | 40.752 | 319 | 184 | 2 | 11 | 328 | 11 | 325 | 8.64e-73 | 228 |
MS.gene09575.t1 | MTR_2g084090 | 40.248 | 323 | 175 | 7 | 12 | 328 | 7 | 317 | 9.62e-73 | 228 |
MS.gene09575.t1 | MTR_2g029740 | 38.739 | 333 | 195 | 6 | 1 | 328 | 1 | 329 | 1.83e-72 | 228 |
MS.gene09575.t1 | MTR_2g084010 | 38.906 | 329 | 188 | 5 | 1 | 328 | 1 | 317 | 2.74e-72 | 226 |
MS.gene09575.t1 | MTR_2g028980 | 39.940 | 333 | 191 | 6 | 1 | 328 | 1 | 329 | 3.17e-72 | 228 |
MS.gene09575.t1 | MTR_2g029830 | 41.100 | 309 | 175 | 4 | 23 | 328 | 24 | 328 | 9.03e-72 | 226 |
MS.gene09575.t1 | MTR_7g107520 | 40.673 | 327 | 184 | 7 | 3 | 328 | 2 | 319 | 1.12e-71 | 225 |
MS.gene09575.t1 | MTR_4g114210 | 40.673 | 327 | 177 | 7 | 7 | 326 | 1 | 317 | 4.58e-71 | 223 |
MS.gene09575.t1 | MTR_2g040000 | 37.846 | 325 | 190 | 6 | 10 | 328 | 12 | 330 | 6.66e-71 | 223 |
MS.gene09575.t1 | MTR_7g093370 | 39.319 | 323 | 184 | 6 | 7 | 325 | 53 | 367 | 1.72e-70 | 224 |
MS.gene09575.t1 | MTR_2g084080 | 37.931 | 319 | 187 | 4 | 11 | 328 | 8 | 316 | 1.84e-70 | 222 |
MS.gene09575.t1 | MTR_1g086320 | 39.645 | 338 | 188 | 8 | 1 | 328 | 1 | 332 | 2.61e-70 | 222 |
MS.gene09575.t1 | MTR_4g125940 | 38.700 | 323 | 189 | 4 | 10 | 328 | 11 | 328 | 3.61e-70 | 221 |
MS.gene09575.t1 | MTR_8g076820 | 39.297 | 313 | 182 | 4 | 21 | 328 | 20 | 329 | 9.99e-70 | 220 |
MS.gene09575.t1 | MTR_2g084110 | 38.125 | 320 | 185 | 4 | 12 | 328 | 7 | 316 | 1.00e-69 | 220 |
MS.gene09575.t1 | MTR_3g094650 | 38.485 | 330 | 186 | 7 | 1 | 325 | 1 | 318 | 1.62e-69 | 219 |
MS.gene09575.t1 | MTR_2g029910 | 40.419 | 334 | 187 | 8 | 2 | 328 | 3 | 331 | 3.20e-69 | 220 |
MS.gene09575.t1 | MTR_7g072510 | 37.500 | 328 | 188 | 5 | 1 | 328 | 1 | 311 | 9.19e-69 | 217 |
MS.gene09575.t1 | MTR_1g086490 | 39.420 | 345 | 186 | 8 | 1 | 328 | 1 | 339 | 1.48e-68 | 218 |
MS.gene09575.t1 | MTR_2g029560 | 38.138 | 333 | 192 | 8 | 1 | 328 | 1 | 324 | 1.58e-68 | 218 |
MS.gene09575.t1 | MTR_4g133800 | 39.465 | 299 | 169 | 6 | 31 | 328 | 45 | 332 | 3.59e-68 | 216 |
MS.gene09575.t1 | MTR_7g086820 | 39.934 | 303 | 172 | 5 | 25 | 327 | 18 | 310 | 3.67e-68 | 216 |
MS.gene09575.t1 | MTR_7g072480 | 38.344 | 326 | 189 | 4 | 4 | 328 | 1 | 315 | 5.75e-68 | 215 |
MS.gene09575.t1 | MTR_4g031140 | 37.255 | 306 | 186 | 4 | 23 | 328 | 24 | 323 | 1.16e-67 | 215 |
MS.gene09575.t1 | MTR_2g029730 | 37.462 | 331 | 198 | 5 | 1 | 328 | 1 | 325 | 1.19e-67 | 216 |
MS.gene09575.t1 | MTR_1g054205 | 37.421 | 318 | 192 | 5 | 11 | 325 | 9 | 322 | 1.77e-67 | 214 |
MS.gene09575.t1 | MTR_5g021060 | 39.867 | 301 | 175 | 4 | 30 | 328 | 33 | 329 | 2.13e-67 | 214 |
MS.gene09575.t1 | MTR_1g038680 | 40.132 | 304 | 169 | 8 | 32 | 328 | 34 | 331 | 2.31e-67 | 214 |
MS.gene09575.t1 | MTR_4g029170 | 36.646 | 322 | 185 | 6 | 13 | 325 | 6 | 317 | 2.41e-66 | 211 |
MS.gene09575.t1 | MTR_4g030890 | 38.047 | 297 | 178 | 4 | 32 | 328 | 105 | 395 | 2.32e-65 | 212 |
MS.gene09575.t1 | MTR_4g029200 | 38.312 | 308 | 178 | 5 | 22 | 328 | 41 | 337 | 2.97e-65 | 209 |
MS.gene09575.t1 | MTR_5g074970 | 38.154 | 325 | 181 | 8 | 7 | 325 | 12 | 322 | 6.47e-65 | 208 |
MS.gene09575.t1 | MTR_5g017860 | 34.783 | 322 | 203 | 5 | 9 | 328 | 9 | 325 | 7.52e-65 | 207 |
MS.gene09575.t1 | MTR_6g043240 | 38.788 | 330 | 181 | 8 | 6 | 328 | 15 | 330 | 9.52e-65 | 208 |
MS.gene09575.t1 | MTR_5g017850 | 35.276 | 326 | 197 | 7 | 6 | 328 | 11 | 325 | 1.82e-64 | 207 |
MS.gene09575.t1 | MTR_0155s0040 | 37.117 | 326 | 185 | 6 | 8 | 328 | 4 | 314 | 1.87e-64 | 206 |
MS.gene09575.t1 | MTR_2g008710 | 34.862 | 327 | 200 | 6 | 5 | 326 | 4 | 322 | 2.01e-64 | 206 |
MS.gene09575.t1 | MTR_2g084000 | 36.615 | 325 | 193 | 6 | 7 | 328 | 4 | 318 | 1.14e-63 | 204 |
MS.gene09575.t1 | MTR_7g086870 | 40.404 | 297 | 162 | 6 | 32 | 327 | 27 | 309 | 1.18e-63 | 204 |
MS.gene09575.t1 | MTR_5g083860 | 37.037 | 324 | 188 | 6 | 5 | 325 | 11 | 321 | 1.93e-63 | 204 |
MS.gene09575.t1 | MTR_3g094670 | 38.066 | 331 | 186 | 7 | 1 | 325 | 1 | 318 | 3.20e-63 | 203 |
MS.gene09575.t1 | MTR_3g072190 | 37.072 | 321 | 192 | 3 | 8 | 328 | 7 | 317 | 5.56e-63 | 202 |
MS.gene09575.t1 | MTR_3g105790 | 35.976 | 328 | 199 | 5 | 1 | 326 | 1 | 319 | 6.11e-63 | 202 |
MS.gene09575.t1 | MTR_2g437770 | 37.624 | 303 | 176 | 7 | 27 | 328 | 50 | 340 | 7.53e-63 | 203 |
MS.gene09575.t1 | MTR_3g466200 | 37.846 | 325 | 178 | 8 | 6 | 325 | 11 | 316 | 7.54e-63 | 202 |
MS.gene09575.t1 | MTR_4g083710 | 37.618 | 319 | 186 | 5 | 14 | 328 | 14 | 323 | 1.24e-62 | 202 |
MS.gene09575.t1 | MTR_4g029180 | 37.037 | 297 | 177 | 4 | 30 | 325 | 30 | 317 | 1.29e-62 | 202 |
MS.gene09575.t1 | MTR_6g043280 | 35.258 | 329 | 196 | 6 | 6 | 328 | 14 | 331 | 1.09e-61 | 200 |
MS.gene09575.t1 | MTR_5g074860 | 36.420 | 324 | 190 | 8 | 7 | 325 | 9 | 321 | 1.48e-61 | 199 |
MS.gene09575.t1 | MTR_2g008160 | 37.742 | 310 | 178 | 7 | 23 | 326 | 20 | 320 | 4.52e-61 | 198 |
MS.gene09575.t1 | MTR_3g094630 | 38.066 | 331 | 186 | 7 | 1 | 325 | 1 | 318 | 1.18e-60 | 197 |
MS.gene09575.t1 | MTR_2g029830 | 41.923 | 260 | 144 | 4 | 72 | 328 | 5 | 260 | 4.54e-60 | 194 |
MS.gene09575.t1 | MTR_4g122640 | 35.922 | 309 | 188 | 7 | 23 | 328 | 34 | 335 | 6.38e-60 | 195 |
MS.gene09575.t1 | MTR_4g125940 | 40.959 | 271 | 151 | 4 | 62 | 328 | 8 | 273 | 1.08e-59 | 193 |
MS.gene09575.t1 | MTR_4g074995 | 37.072 | 321 | 176 | 6 | 12 | 328 | 9 | 307 | 1.23e-59 | 194 |
MS.gene09575.t1 | MTR_5g074760 | 36.778 | 329 | 189 | 8 | 2 | 325 | 3 | 317 | 1.54e-58 | 191 |
MS.gene09575.t1 | MTR_6g043460 | 36.503 | 326 | 189 | 6 | 7 | 325 | 10 | 324 | 1.57e-58 | 192 |
MS.gene09575.t1 | MTR_6g027440 | 36.957 | 322 | 191 | 6 | 4 | 325 | 1 | 310 | 2.21e-58 | 191 |
MS.gene09575.t1 | MTR_5g074740 | 36.474 | 329 | 190 | 8 | 2 | 325 | 3 | 317 | 4.64e-58 | 190 |
MS.gene09575.t1 | MTR_4g029190 | 37.500 | 296 | 171 | 6 | 36 | 328 | 55 | 339 | 6.94e-58 | 190 |
MS.gene09575.t1 | MTR_3g467600 | 36.890 | 328 | 187 | 8 | 6 | 328 | 11 | 323 | 4.34e-57 | 187 |
MS.gene09575.t1 | MTR_5g014100 | 35.737 | 319 | 192 | 5 | 18 | 328 | 17 | 330 | 6.75e-57 | 187 |
MS.gene09575.t1 | MTR_5g074710 | 36.170 | 329 | 191 | 8 | 2 | 325 | 3 | 317 | 7.38e-57 | 187 |
MS.gene09575.t1 | MTR_1g115900 | 37.346 | 324 | 183 | 9 | 13 | 328 | 9 | 320 | 9.41e-57 | 187 |
MS.gene09575.t1 | MTR_5g049280 | 33.861 | 316 | 191 | 8 | 23 | 328 | 29 | 336 | 7.82e-56 | 185 |
MS.gene09575.t1 | MTR_1g022970 | 35.880 | 301 | 188 | 3 | 27 | 325 | 46 | 343 | 1.27e-55 | 184 |
MS.gene09575.t1 | MTR_2g099175 | 33.981 | 309 | 183 | 5 | 26 | 325 | 35 | 331 | 1.78e-55 | 184 |
MS.gene09575.t1 | MTR_2g067440 | 32.749 | 342 | 195 | 6 | 17 | 328 | 50 | 386 | 2.21e-55 | 185 |
MS.gene09575.t1 | MTR_7g026990 | 33.846 | 325 | 202 | 7 | 6 | 328 | 8 | 321 | 5.46e-55 | 182 |
MS.gene09575.t1 | MTR_4g132490 | 32.219 | 329 | 210 | 6 | 4 | 325 | 1 | 323 | 1.89e-54 | 181 |
MS.gene09575.t1 | MTR_3g466180 | 35.404 | 322 | 193 | 5 | 5 | 325 | 12 | 319 | 4.66e-53 | 177 |
MS.gene09575.t1 | MTR_4g074990 | 32.923 | 325 | 189 | 6 | 8 | 328 | 5 | 304 | 3.59e-52 | 174 |
MS.gene09575.t1 | MTR_2g077990 | 32.036 | 334 | 191 | 6 | 25 | 326 | 74 | 403 | 1.45e-51 | 176 |
MS.gene09575.t1 | MTR_2g078610 | 31.437 | 334 | 193 | 7 | 25 | 326 | 74 | 403 | 6.32e-51 | 174 |
MS.gene09575.t1 | MTR_3g072190 | 37.838 | 259 | 151 | 3 | 70 | 328 | 2 | 250 | 3.99e-50 | 167 |
MS.gene09575.t1 | MTR_1g066710 | 35.179 | 307 | 187 | 5 | 25 | 328 | 25 | 322 | 2.26e-49 | 167 |
MS.gene09575.t1 | MTR_1g066640 | 35.505 | 307 | 186 | 5 | 25 | 328 | 25 | 322 | 5.70e-49 | 167 |
MS.gene09575.t1 | MTR_4g132110 | 33.882 | 304 | 189 | 5 | 27 | 327 | 32 | 326 | 6.32e-49 | 167 |
MS.gene09575.t1 | MTR_2g078280 | 32.399 | 321 | 181 | 6 | 25 | 313 | 74 | 390 | 9.46e-49 | 168 |
MS.gene09575.t1 | MTR_3g105790 | 37.860 | 243 | 145 | 3 | 86 | 326 | 5 | 243 | 2.84e-48 | 162 |
MS.gene09575.t1 | MTR_1g066380 | 35.048 | 311 | 182 | 6 | 25 | 328 | 25 | 322 | 3.03e-48 | 165 |
MS.gene09575.t1 | MTR_2g008730 | 30.091 | 329 | 193 | 6 | 3 | 326 | 2 | 298 | 1.32e-47 | 162 |
MS.gene09575.t1 | MTR_5g033470 | 33.010 | 309 | 193 | 7 | 25 | 325 | 71 | 373 | 1.52e-47 | 164 |
MS.gene09575.t1 | MTR_2g008160 | 33.333 | 312 | 154 | 7 | 23 | 326 | 20 | 285 | 5.16e-47 | 160 |
MS.gene09575.t1 | MTR_4g132110 | 33.333 | 309 | 189 | 7 | 27 | 327 | 32 | 331 | 5.37e-47 | 162 |
MS.gene09575.t1 | MTR_0147s0010 | 33.230 | 322 | 178 | 7 | 27 | 328 | 77 | 381 | 5.48e-47 | 163 |
MS.gene09575.t1 | MTR_1g066680 | 34.740 | 308 | 186 | 6 | 25 | 328 | 25 | 321 | 1.69e-45 | 157 |
MS.gene09575.t1 | MTR_4g074980 | 35.385 | 260 | 153 | 6 | 6 | 261 | 5 | 253 | 8.30e-44 | 151 |
MS.gene09575.t1 | MTR_4g074980 | 30.887 | 327 | 184 | 8 | 6 | 328 | 5 | 293 | 8.94e-43 | 149 |
MS.gene09575.t1 | MTR_2g067450 | 32.692 | 312 | 191 | 9 | 25 | 328 | 9 | 309 | 2.46e-41 | 146 |
MS.gene09575.t1 | MTR_5g074860 | 30.864 | 324 | 169 | 7 | 7 | 325 | 9 | 282 | 3.77e-40 | 142 |
MS.gene09575.t1 | MTR_2g029880 | 40.206 | 194 | 104 | 3 | 137 | 328 | 4 | 187 | 5.87e-39 | 137 |
MS.gene09575.t1 | MTR_1g066380 | 35.094 | 265 | 152 | 6 | 71 | 328 | 3 | 254 | 3.04e-35 | 129 |
MS.gene09575.t1 | MTR_2g008160 | 37.438 | 203 | 104 | 6 | 23 | 222 | 20 | 202 | 3.98e-35 | 127 |
MS.gene09575.t1 | MTR_5g074700 | 35.808 | 229 | 122 | 7 | 103 | 328 | 7 | 213 | 3.27e-33 | 122 |
MS.gene09575.t1 | MTR_3g072210 | 38.503 | 187 | 106 | 4 | 141 | 325 | 55 | 234 | 6.44e-32 | 119 |
MS.gene09575.t1 | MTR_7g072490 | 31.933 | 238 | 96 | 6 | 73 | 309 | 2 | 174 | 2.35e-26 | 104 |
MS.gene09575.t1 | MTR_7g086790 | 36.126 | 191 | 97 | 6 | 74 | 264 | 17 | 182 | 3.92e-25 | 100 |
MS.gene09575.t1 | MTR_2g078560 | 26.941 | 219 | 129 | 3 | 139 | 326 | 99 | 317 | 1.63e-23 | 99.0 |
MS.gene09575.t1 | MTR_4g031040 | 33.784 | 148 | 79 | 3 | 122 | 267 | 5 | 135 | 1.44e-22 | 92.0 |
MS.gene09575.t1 | MTR_5g058120 | 31.875 | 160 | 98 | 2 | 166 | 325 | 7 | 155 | 7.40e-18 | 82.0 |
MS.gene09575.t1 | MTR_3g072260 | 37.121 | 132 | 76 | 3 | 10 | 137 | 5 | 133 | 3.41e-17 | 77.4 |
MS.gene09575.t1 | MTR_1g098320 | 47.368 | 76 | 40 | 0 | 252 | 327 | 47 | 122 | 3.16e-16 | 74.7 |
MS.gene09575.t1 | MTR_3g107060 | 32.022 | 178 | 93 | 7 | 47 | 212 | 92 | 253 | 2.43e-15 | 75.9 |
MS.gene09575.t1 | MTR_4g114220 | 34.586 | 133 | 56 | 4 | 7 | 139 | 1 | 102 | 6.99e-14 | 68.6 |
MS.gene09575.t1 | MTR_3g462850 | 30.282 | 142 | 90 | 6 | 194 | 328 | 9 | 148 | 1.04e-13 | 68.2 |
MS.gene09575.t1 | MTR_4g012865 | 45.161 | 62 | 34 | 0 | 32 | 93 | 82 | 143 | 4.05e-13 | 66.6 |
MS.gene09575.t1 | MTR_7g107500 | 39.583 | 96 | 56 | 2 | 233 | 328 | 3 | 96 | 4.71e-13 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09575.t1 | AT3G49960 | 62.769 | 325 | 121 | 0 | 1 | 325 | 1 | 325 | 2.65e-153 | 433 |
MS.gene09575.t1 | AT4G37530 | 66.007 | 303 | 103 | 0 | 23 | 325 | 23 | 325 | 1.19e-152 | 431 |
MS.gene09575.t1 | AT5G67400 | 61.846 | 325 | 124 | 0 | 1 | 325 | 1 | 325 | 2.90e-151 | 428 |
MS.gene09575.t1 | AT4G37520 | 64.452 | 301 | 107 | 0 | 25 | 325 | 25 | 325 | 1.96e-149 | 423 |
MS.gene09575.t1 | AT4G30170 | 63.158 | 304 | 108 | 1 | 25 | 328 | 25 | 324 | 8.71e-148 | 419 |
MS.gene09575.t1 | AT4G37520 | 64.120 | 301 | 105 | 1 | 25 | 325 | 25 | 322 | 2.62e-146 | 415 |
MS.gene09575.t1 | AT2G18980 | 61.635 | 318 | 118 | 1 | 11 | 328 | 9 | 322 | 2.66e-146 | 415 |
MS.gene09575.t1 | AT4G37530 | 68.077 | 260 | 83 | 0 | 23 | 282 | 23 | 282 | 1.19e-134 | 384 |
MS.gene09575.t1 | AT5G14130 | 54.688 | 320 | 141 | 3 | 7 | 326 | 12 | 327 | 8.79e-119 | 345 |
MS.gene09575.t1 | AT5G14130 | 54.688 | 320 | 141 | 3 | 7 | 326 | 53 | 368 | 2.05e-118 | 346 |
MS.gene09575.t1 | AT4G17690 | 44.984 | 309 | 161 | 4 | 18 | 325 | 18 | 318 | 1.08e-93 | 281 |
MS.gene09575.t1 | AT5G47000 | 46.358 | 302 | 155 | 3 | 25 | 325 | 31 | 326 | 3.05e-90 | 273 |
MS.gene09575.t1 | AT2G34060 | 43.831 | 308 | 167 | 4 | 24 | 327 | 39 | 344 | 6.38e-87 | 265 |
MS.gene09575.t1 | AT5G40150 | 45.752 | 306 | 158 | 4 | 24 | 328 | 29 | 327 | 1.83e-85 | 261 |
MS.gene09575.t1 | AT3G28200 | 41.883 | 308 | 166 | 4 | 24 | 328 | 18 | 315 | 6.56e-82 | 251 |
MS.gene09575.t1 | AT3G21770 | 42.857 | 308 | 167 | 6 | 23 | 327 | 25 | 326 | 2.01e-78 | 243 |
MS.gene09575.t1 | AT5G51890 | 40.867 | 323 | 181 | 7 | 8 | 328 | 7 | 321 | 2.50e-78 | 242 |
MS.gene09575.t1 | AT5G42180 | 41.975 | 324 | 175 | 8 | 4 | 325 | 1 | 313 | 7.46e-78 | 241 |
MS.gene09575.t1 | AT1G05260 | 41.159 | 328 | 184 | 6 | 4 | 327 | 1 | 323 | 9.40e-78 | 241 |
MS.gene09575.t1 | AT1G24110 | 41.139 | 316 | 182 | 3 | 11 | 325 | 6 | 318 | 1.42e-77 | 240 |
MS.gene09575.t1 | AT1G71695 | 39.940 | 333 | 179 | 6 | 6 | 326 | 13 | 336 | 1.90e-74 | 233 |
MS.gene09575.t1 | AT5G06730 | 38.769 | 325 | 187 | 4 | 6 | 328 | 19 | 333 | 6.56e-74 | 232 |
MS.gene09575.t1 | AT3G49120 | 39.571 | 326 | 187 | 5 | 10 | 328 | 12 | 334 | 7.81e-73 | 229 |
MS.gene09575.t1 | AT3G49110 | 40.184 | 326 | 185 | 5 | 10 | 328 | 13 | 335 | 3.48e-72 | 228 |
MS.gene09575.t1 | AT3G03670 | 38.050 | 318 | 186 | 5 | 11 | 325 | 8 | 317 | 6.77e-72 | 226 |
MS.gene09575.t1 | AT3G32980 | 39.571 | 326 | 187 | 5 | 10 | 328 | 11 | 333 | 7.31e-72 | 226 |
MS.gene09575.t1 | AT3G01190 | 39.264 | 326 | 188 | 7 | 1 | 325 | 1 | 317 | 2.22e-71 | 224 |
MS.gene09575.t1 | AT4G11290 | 38.369 | 331 | 195 | 6 | 1 | 328 | 1 | 325 | 1.22e-70 | 223 |
MS.gene09575.t1 | AT4G08780 | 41.290 | 310 | 175 | 4 | 23 | 328 | 20 | 326 | 1.20e-69 | 221 |
MS.gene09575.t1 | AT4G08770 | 40.968 | 310 | 176 | 4 | 23 | 328 | 20 | 326 | 1.64e-69 | 220 |
MS.gene09575.t1 | AT2G38380 | 37.695 | 321 | 194 | 4 | 11 | 328 | 15 | 332 | 3.52e-69 | 219 |
MS.gene09575.t1 | AT4G36430 | 38.245 | 319 | 193 | 3 | 11 | 328 | 14 | 329 | 6.29e-69 | 218 |
MS.gene09575.t1 | AT5G17820 | 38.318 | 321 | 178 | 6 | 5 | 325 | 9 | 309 | 6.72e-69 | 218 |
MS.gene09575.t1 | AT5G19880 | 37.578 | 322 | 193 | 5 | 9 | 325 | 7 | 325 | 7.53e-69 | 218 |
MS.gene09575.t1 | AT2G18140 | 39.597 | 298 | 176 | 3 | 32 | 328 | 40 | 334 | 7.65e-69 | 218 |
MS.gene09575.t1 | AT5G15180 | 36.527 | 334 | 200 | 7 | 1 | 328 | 1 | 328 | 1.28e-68 | 218 |
MS.gene09575.t1 | AT4G31760 | 39.506 | 324 | 180 | 6 | 11 | 328 | 12 | 325 | 1.45e-68 | 217 |
MS.gene09575.t1 | AT5G06720 | 39.216 | 306 | 179 | 5 | 23 | 325 | 28 | 329 | 1.77e-68 | 217 |
MS.gene09575.t1 | AT2G38390 | 37.383 | 321 | 195 | 4 | 11 | 328 | 15 | 332 | 2.01e-68 | 218 |
MS.gene09575.t1 | AT5G17820 | 39.297 | 313 | 177 | 5 | 13 | 325 | 63 | 362 | 2.98e-68 | 218 |
MS.gene09575.t1 | AT2G18150 | 37.462 | 331 | 196 | 5 | 6 | 328 | 8 | 335 | 9.80e-68 | 216 |
MS.gene09575.t1 | AT4G33420 | 38.226 | 327 | 184 | 7 | 6 | 328 | 12 | 324 | 4.26e-67 | 213 |
MS.gene09575.t1 | AT2G22420 | 37.231 | 325 | 197 | 5 | 4 | 328 | 1 | 318 | 4.53e-67 | 214 |
MS.gene09575.t1 | AT1G05240 | 39.604 | 303 | 174 | 5 | 27 | 326 | 26 | 322 | 8.86e-67 | 213 |
MS.gene09575.t1 | AT1G05250 | 39.604 | 303 | 174 | 5 | 27 | 326 | 26 | 322 | 8.86e-67 | 213 |
MS.gene09575.t1 | AT4G33420 | 38.226 | 327 | 184 | 7 | 6 | 328 | 59 | 371 | 2.62e-66 | 213 |
MS.gene09575.t1 | AT1G14540 | 36.533 | 323 | 190 | 5 | 7 | 328 | 6 | 314 | 1.22e-65 | 209 |
MS.gene09575.t1 | AT5G64120 | 38.047 | 297 | 175 | 5 | 32 | 328 | 40 | 327 | 2.84e-65 | 209 |
MS.gene09575.t1 | AT5G19890 | 37.963 | 324 | 188 | 6 | 9 | 328 | 12 | 326 | 3.13e-65 | 209 |
MS.gene09575.t1 | AT4G16270 | 39.333 | 300 | 172 | 8 | 32 | 328 | 55 | 347 | 4.68e-65 | 209 |
MS.gene09575.t1 | AT5G05340 | 38.361 | 305 | 174 | 5 | 24 | 325 | 27 | 320 | 6.20e-64 | 205 |
MS.gene09575.t1 | AT5G66390 | 39.189 | 296 | 174 | 4 | 32 | 325 | 38 | 329 | 7.57e-64 | 206 |
MS.gene09575.t1 | AT2G41480 | 37.231 | 325 | 191 | 5 | 9 | 328 | 11 | 327 | 8.43e-64 | 205 |
MS.gene09575.t1 | AT2G39040 | 38.782 | 312 | 179 | 7 | 24 | 328 | 43 | 349 | 1.79e-63 | 205 |
MS.gene09575.t1 | AT3G50990 | 35.474 | 327 | 206 | 4 | 1 | 325 | 14 | 337 | 2.26e-63 | 204 |
MS.gene09575.t1 | AT1G34510 | 37.461 | 323 | 183 | 7 | 4 | 325 | 1 | 305 | 4.03e-63 | 203 |
MS.gene09575.t1 | AT5G64110 | 36.533 | 323 | 190 | 6 | 12 | 328 | 16 | 329 | 5.04e-63 | 203 |
MS.gene09575.t1 | AT2G24800 | 37.097 | 310 | 179 | 6 | 25 | 328 | 29 | 328 | 2.25e-62 | 201 |
MS.gene09575.t1 | AT1G14550 | 36.364 | 330 | 198 | 6 | 1 | 328 | 1 | 320 | 2.57e-62 | 201 |
MS.gene09575.t1 | AT5G58400 | 38.080 | 323 | 181 | 8 | 8 | 325 | 13 | 321 | 2.75e-62 | 201 |
MS.gene09575.t1 | AT1G77100 | 37.195 | 328 | 187 | 8 | 6 | 326 | 1 | 316 | 4.62e-62 | 200 |
MS.gene09575.t1 | AT1G49570 | 33.724 | 341 | 202 | 7 | 4 | 325 | 11 | 346 | 2.50e-61 | 199 |
MS.gene09575.t1 | AT5G39580 | 36.615 | 325 | 193 | 9 | 8 | 328 | 3 | 318 | 4.82e-61 | 197 |
MS.gene09575.t1 | AT4G26010 | 35.826 | 321 | 188 | 7 | 8 | 327 | 4 | 307 | 5.21e-61 | 197 |
MS.gene09575.t1 | AT4G26010 | 36.025 | 322 | 186 | 8 | 8 | 327 | 32 | 335 | 9.29e-61 | 197 |
MS.gene09575.t1 | AT1G30870 | 38.312 | 308 | 176 | 7 | 22 | 326 | 46 | 342 | 6.46e-60 | 196 |
MS.gene09575.t1 | AT4G33870 | 32.544 | 338 | 189 | 5 | 24 | 326 | 65 | 398 | 1.50e-59 | 196 |
MS.gene09575.t1 | AT1G44970 | 36.482 | 307 | 190 | 3 | 24 | 328 | 42 | 345 | 3.72e-59 | 194 |
MS.gene09575.t1 | AT2G43480 | 34.084 | 311 | 189 | 6 | 22 | 325 | 30 | 331 | 1.84e-58 | 191 |
MS.gene09575.t1 | AT5G22410 | 34.568 | 324 | 195 | 9 | 7 | 325 | 10 | 321 | 3.05e-57 | 188 |
MS.gene09575.t1 | AT5G58390 | 37.846 | 325 | 184 | 8 | 6 | 325 | 1 | 312 | 6.05e-57 | 187 |
MS.gene09575.t1 | AT5G24070 | 34.951 | 309 | 185 | 6 | 26 | 327 | 34 | 333 | 2.32e-56 | 186 |
MS.gene09575.t1 | AT5G64100 | 35.333 | 300 | 180 | 6 | 32 | 328 | 42 | 330 | 2.73e-55 | 183 |
MS.gene09575.t1 | AT4G25980 | 34.091 | 308 | 189 | 5 | 25 | 326 | 24 | 323 | 5.87e-55 | 182 |
MS.gene09575.t1 | AT2G35380 | 34.441 | 331 | 202 | 7 | 9 | 328 | 8 | 334 | 6.57e-53 | 177 |
MS.gene09575.t1 | AT1G68850 | 31.361 | 338 | 214 | 10 | 4 | 328 | 2 | 334 | 1.43e-51 | 174 |
MS.gene09575.t1 | AT4G21960 | 32.776 | 299 | 189 | 5 | 32 | 327 | 36 | 325 | 4.45e-48 | 164 |
MS.gene09575.t1 | AT2G37130 | 33.657 | 309 | 192 | 6 | 24 | 328 | 27 | 326 | 3.49e-47 | 162 |
MS.gene09575.t1 | AT2G37130 | 33.993 | 303 | 187 | 6 | 30 | 328 | 2 | 295 | 1.29e-46 | 160 |
MS.gene09575.t1 | AT3G17070 | 32.680 | 306 | 191 | 6 | 27 | 325 | 38 | 335 | 1.81e-45 | 158 |
MS.gene09575.t1 | AT2G35380 | 35.897 | 234 | 140 | 5 | 102 | 328 | 16 | 246 | 1.79e-37 | 134 |
MS.gene09575.t1 | AT2G24800 | 38.012 | 171 | 99 | 3 | 25 | 195 | 29 | 192 | 2.97e-31 | 118 |
MS.gene09575.t1 | AT3G17070 | 30.303 | 264 | 168 | 7 | 69 | 325 | 18 | 272 | 2.24e-30 | 116 |
MS.gene09575.t1 | AT5G39580 | 40.719 | 167 | 91 | 5 | 32 | 198 | 30 | 188 | 3.94e-28 | 109 |
MS.gene09575.t1 | AT4G25980 | 38.202 | 178 | 101 | 4 | 25 | 201 | 69 | 238 | 4.02e-28 | 110 |
MS.gene09575.t1 | AT4G32320 | 28.315 | 279 | 153 | 12 | 7 | 267 | 74 | 323 | 5.12e-17 | 80.9 |
Find 77 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAGTGGTGTCTACTTAAT+TGG | 0.165416 | 5.2:+7659948 | None:intergenic |
TCAAAGGCATGTGGAGTAAT+TGG | 0.184890 | 5.2:+7657802 | None:intergenic |
ACAGAAATGATTGCACTTTC+AGG | 0.236725 | 5.2:-7658955 | MS.gene09575:intron |
CCGATAGAGTGTACAATTTC+AGG | 0.237824 | 5.2:-7657927 | MS.gene09575:CDS |
TCTAAAGATTCTGATGTAAA+TGG | 0.264360 | 5.2:-7659048 | MS.gene09575:CDS |
CCAGCCAATGAAAGATTATC+AGG | 0.272485 | 5.2:+7659645 | None:intergenic |
TGTTGCTGCCATGACCAAAT+TGG | 0.291402 | 5.2:-7657647 | MS.gene09575:CDS |
CTTCCATGACTGCTTTGTTC+AGG | 0.296230 | 5.2:-7659828 | MS.gene09575:intron |
GACACCAACTCTACCCAATT+TGG | 0.305325 | 5.2:+7657633 | None:intergenic |
AGCTTAATCTTATACTTGTT+TGG | 0.314208 | 5.2:-7660015 | MS.gene09575:CDS |
ACCATACTATGAGGTAGAAT+TGG | 0.315906 | 5.2:-7659091 | MS.gene09575:CDS |
TCCAAGGGTTGCAGTTGATA+TGG | 0.330440 | 5.2:-7657827 | MS.gene09575:CDS |
CAGCACAAGAAACTTTATTC+TGG | 0.336699 | 5.2:+7659565 | None:intergenic |
AACAGCATCCACAGCTGCTT+TGG | 0.345598 | 5.2:+7659596 | None:intergenic |
CCCAATTCTACCTCATAGTA+TGG | 0.385461 | 5.2:+7659090 | None:intergenic |
AAAAGCATTTACTGCAGCTT+TGG | 0.387024 | 5.2:+7657702 | None:intergenic |
GTAGAATTGGGAAGATTTGA+TGG | 0.400406 | 5.2:-7659078 | MS.gene09575:CDS |
TCACCCTGATAATCTTTCAT+TGG | 0.428396 | 5.2:-7659649 | MS.gene09575:CDS |
CCTGATAATCTTTCATTGGC+TGG | 0.430855 | 5.2:-7659645 | MS.gene09575:CDS |
GTAGTGGTGTCTACTTAATT+GGG | 0.434010 | 5.2:+7659949 | None:intergenic |
CAAAGGCATGTGGAGTAATT+GGG | 0.442444 | 5.2:+7657803 | None:intergenic |
ACCCTTGGATCCACATCCCT+TGG | 0.454377 | 5.2:+7657841 | None:intergenic |
AATCTTTCATTGGCTGGAGA+TGG | 0.460504 | 5.2:-7659639 | MS.gene09575:CDS |
ATCAATGTGCCCAAGGGATG+TGG | 0.460713 | 5.2:-7657851 | MS.gene09575:CDS |
TTGTGCTGATATTCTAGCTA+TGG | 0.463503 | 5.2:-7659550 | MS.gene09575:CDS |
GTTTAAACAATGTATTAAGC+TGG | 0.467335 | 5.2:+7658995 | None:intergenic |
CCATACTATGAGGTAGAATT+GGG | 0.468056 | 5.2:-7659090 | MS.gene09575:CDS |
TTGAATCCGTGAAGAGGACT+TGG | 0.468682 | 5.2:+7657728 | None:intergenic |
TCCATATCAACTGCAACCCT+TGG | 0.475393 | 5.2:+7657826 | None:intergenic |
CTATTTCAAGAATCTACAAA+AGG | 0.475878 | 5.2:-7657773 | MS.gene09575:CDS |
AGCTGGTTCAAGTTGAATCC+TGG | 0.480998 | 5.2:+7659012 | None:intergenic |
GTTGCTGCCATGACCAAATT+GGG | 0.483030 | 5.2:-7657646 | MS.gene09575:CDS |
GCGTAGTGTAAGTCTAATGT+AGG | 0.483647 | 5.2:+7657886 | None:intergenic |
CTCAGACCAAGTCCTCTTCA+CGG | 0.486562 | 5.2:-7657734 | MS.gene09575:CDS |
ATACATTGTTTAAACATCAC+GGG | 0.490569 | 5.2:-7658987 | MS.gene09575:CDS |
CAAGAATCTACAAAAGGGAA+AGG | 0.501575 | 5.2:-7657767 | MS.gene09575:CDS |
AAGAAGAGACGTAGAGTGGC+AGG | 0.502656 | 5.2:+7659848 | None:intergenic |
CCCTTGGATCCACATCCCTT+GGG | 0.505679 | 5.2:+7657842 | None:intergenic |
AAGAATCTACAAAAGGGAAA+GGG | 0.508178 | 5.2:-7657766 | MS.gene09575:CDS |
AATACATTGTTTAAACATCA+CGG | 0.513218 | 5.2:-7658988 | MS.gene09575:CDS |
GTGTCAAGAATTCACACAAT+GGG | 0.518226 | 5.2:-7657615 | MS.gene09575:CDS |
AACCCGTGATGTTATTGCAT+TGG | 0.520448 | 5.2:-7659526 | MS.gene09575:intron |
TTCAAGTTGAATCCTGGCTC+AGG | 0.520683 | 5.2:+7659018 | None:intergenic |
TTACCTGAACAAAGCAGTCA+TGG | 0.532969 | 5.2:+7659825 | None:intergenic |
AATGGAAAACTTCCTGAGCC+AGG | 0.533024 | 5.2:-7659030 | MS.gene09575:CDS |
TCCCTCTCTGCTCTATTATG+TGG | 0.534283 | 5.2:+7659672 | None:intergenic |
TCTGTAGGTGCTCACACCGT+TGG | 0.536753 | 5.2:-7657973 | MS.gene09575:intron |
GAAACTTTATTCTGGCAAAG+AGG | 0.538555 | 5.2:+7659573 | None:intergenic |
GGTCATGGCAGCAACAAAGT+TGG | 0.538768 | 5.2:+7657654 | None:intergenic |
CCAATTACACAGGGGTGTGA+TGG | 0.539283 | 5.2:-7659717 | MS.gene09575:intron |
CCTGAAATTGTACACTCTAT+CGG | 0.543139 | 5.2:+7657927 | None:intergenic |
AATTAAAATCAATGTGCCCA+AGG | 0.543156 | 5.2:-7657858 | MS.gene09575:CDS |
TAGAATTGGGAAGATTTGAT+GGG | 0.544238 | 5.2:-7659077 | MS.gene09575:CDS |
TATTTCAAGAATCTACAAAA+GGG | 0.560775 | 5.2:-7657772 | MS.gene09575:CDS |
AACCAATGCAATAACATCAC+GGG | 0.563893 | 5.2:+7659524 | None:intergenic |
CTTGAAATAGACATTATCAA+AGG | 0.566475 | 5.2:+7657786 | None:intergenic |
GCCCAAGGGATGTGGATCCA+AGG | 0.566912 | 5.2:-7657843 | MS.gene09575:CDS |
TGGATCTTGAATCCGTGAAG+AGG | 0.581662 | 5.2:+7657722 | None:intergenic |
ACACAATGGGAACATTCGTA+CGG | 0.590337 | 5.2:-7657602 | MS.gene09575:CDS |
GCCACATAATAGAGCAGAGA+GGG | 0.597026 | 5.2:-7659673 | MS.gene09575:CDS |
CTACTTAATTGGGCATGAGT+AGG | 0.598762 | 5.2:+7659959 | None:intergenic |
CCCAAGGGATGTGGATCCAA+GGG | 0.601578 | 5.2:-7657842 | MS.gene09575:CDS |
ATTAAAATCAATGTGCCCAA+GGG | 0.604041 | 5.2:-7657857 | MS.gene09575:CDS |
CGTGAAGAGGACTTGGTCTG+AGG | 0.605078 | 5.2:+7657735 | None:intergenic |
ATGACCAAATTGGGTAGAGT+TGG | 0.605285 | 5.2:-7657637 | MS.gene09575:CDS |
AAACCAATGCAATAACATCA+CGG | 0.605408 | 5.2:+7659523 | None:intergenic |
TATACAAGCCAAAGCAGCTG+TGG | 0.607386 | 5.2:-7659604 | MS.gene09575:CDS |
AACTCTACCCAATTTGGTCA+TGG | 0.620775 | 5.2:+7657639 | None:intergenic |
GGCAGGAGGACCATACTATG+AGG | 0.631628 | 5.2:-7659100 | MS.gene09575:CDS |
CGTAGTGTAAGTCTAATGTA+GGG | 0.631745 | 5.2:+7657887 | None:intergenic |
CAGCCAATGAAAGATTATCA+GGG | 0.640554 | 5.2:+7659646 | None:intergenic |
ATGGAAGAAGAGACGTAGAG+TGG | 0.643216 | 5.2:+7659844 | None:intergenic |
TAGGACAAGAATTCTTGTAG+TGG | 0.645111 | 5.2:+7659933 | None:intergenic |
TAGACATTATCAAAGGCATG+TGG | 0.651893 | 5.2:+7657793 | None:intergenic |
GGTGTCAAGAATTCACACAA+TGG | 0.671153 | 5.2:-7657616 | MS.gene09575:CDS |
GTTGCAATGTGAGAATCCAA+CGG | 0.699363 | 5.2:+7657957 | None:intergenic |
CGCCACATAATAGAGCAGAG+AGG | 0.791379 | 5.2:-7659674 | MS.gene09575:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAATAGATAAAACTT+TGG | - | chr5.2:7659580-7659599 | MS.gene09575:CDS | 10.0% |
!! | AAGTTTAAAAATTAGATTGA+TGG | - | chr5.2:7658329-7658348 | MS.gene09575:intron | 15.0% |
!! | AGAAAAATAAAGATATTGAA+GGG | - | chr5.2:7659269-7659288 | MS.gene09575:intron | 15.0% |
!! | TAGAAAAATAAAGATATTGA+AGG | - | chr5.2:7659268-7659287 | MS.gene09575:intron | 15.0% |
!! | AATAAAAAGTGAAAAAACCA+AGG | + | chr5.2:7659444-7659463 | None:intergenic | 20.0% |
!! | AATACATTGTTTAAACATCA+CGG | - | chr5.2:7658619-7658638 | MS.gene09575:intron | 20.0% |
!! | AGTAATCATTCTTAAAAAGT+TGG | - | chr5.2:7659349-7659368 | MS.gene09575:intron | 20.0% |
!! | GAAAAGGTAACATTTATTTA+TGG | + | chr5.2:7657841-7657860 | None:intergenic | 20.0% |
!! | TAGGATAATTAAAATAGTCA+CGG | + | chr5.2:7658233-7658252 | None:intergenic | 20.0% |
!! | TATTTCAAGAATCTACAAAA+GGG | - | chr5.2:7659835-7659854 | MS.gene09575:CDS | 20.0% |
!! | TCAAAAAAGTTGTCATTAAA+TGG | + | chr5.2:7659418-7659437 | None:intergenic | 20.0% |
!! | TCTAATTATTAGAATAGACT+TGG | - | chr5.2:7658363-7658382 | MS.gene09575:intron | 20.0% |
!! | TGCACAATATAAATTAGAAA+AGG | + | chr5.2:7657857-7657876 | None:intergenic | 20.0% |
!! | TTCACAATATATCAAAGTTA+AGG | + | chr5.2:7658862-7658881 | None:intergenic | 20.0% |
!!! | AATGTGAAATTTGAATTTTC+AGG | - | chr5.2:7658486-7658505 | MS.gene09575:intron | 20.0% |
!!! | ACACTTTTCCAATTAATTAA+AGG | - | chr5.2:7658700-7658719 | MS.gene09575:intron | 20.0% |
!!! | CACTTTTCCAATTAATTAAA+GGG | - | chr5.2:7658701-7658720 | MS.gene09575:intron | 20.0% |
!!! | TAAAGTTACTTTGTAGTATA+TGG | + | chr5.2:7659199-7659218 | None:intergenic | 20.0% |
!!! | TCAATTACATGCATTTTATT+TGG | - | chr5.2:7657811-7657830 | MS.gene09575:CDS | 20.0% |
!!! | TTGGTTTTTTCACTTTTTAT+TGG | - | chr5.2:7659443-7659462 | MS.gene09575:intron | 20.0% |
!!! | TTTTTATTGGTCAAAAACAA+TGG | - | chr5.2:7659456-7659475 | MS.gene09575:intron | 20.0% |
! | AGCTTAATCTTATACTTGTT+TGG | - | chr5.2:7657592-7657611 | MS.gene09575:CDS | 25.0% |
! | ATACATTGTTTAAACATCAC+GGG | - | chr5.2:7658620-7658639 | MS.gene09575:intron | 25.0% |
! | ATCAAAGTTAAGGACAAATT+TGG | + | chr5.2:7658852-7658871 | None:intergenic | 25.0% |
! | CTATTTCAAGAATCTACAAA+AGG | - | chr5.2:7659834-7659853 | MS.gene09575:CDS | 25.0% |
! | CTTGAAATAGACATTATCAA+AGG | + | chr5.2:7659824-7659843 | None:intergenic | 25.0% |
! | GTTTAAACAATGTATTAAGC+TGG | + | chr5.2:7658615-7658634 | None:intergenic | 25.0% |
! | TATGATATTCCAATTACACA+GGG | - | chr5.2:7657881-7657900 | MS.gene09575:CDS | 25.0% |
! | TCTAAAGATTCTGATGTAAA+TGG | - | chr5.2:7658559-7658578 | MS.gene09575:intron | 25.0% |
! | TTACTCGTTATAATAGTGTT+TGG | + | chr5.2:7658412-7658431 | None:intergenic | 25.0% |
! | TTATGATATTCCAATTACAC+AGG | - | chr5.2:7657880-7657899 | MS.gene09575:CDS | 25.0% |
!! | ATTCAGTCTTATAACTAACT+AGG | - | chr5.2:7658449-7658468 | MS.gene09575:intron | 25.0% |
!! | CCAGTCAAATAATTTTAAAC+AGG | - | chr5.2:7658726-7658745 | MS.gene09575:intron | 25.0% |
!! | CCTGTTTAAAATTATTTGAC+TGG | + | chr5.2:7658729-7658748 | None:intergenic | 25.0% |
!!! | CAAAGAAAGTTGATATCTTT+AGG | + | chr5.2:7658252-7658271 | None:intergenic | 25.0% |
AAACCAATGCAATAACATCA+CGG | + | chr5.2:7658087-7658106 | None:intergenic | 30.0% | |
AAGAATCTACAAAAGGGAAA+GGG | - | chr5.2:7659841-7659860 | MS.gene09575:CDS | 30.0% | |
AAGACTGAATTAACTTTCAC+AGG | + | chr5.2:7658439-7658458 | None:intergenic | 30.0% | |
AATTAAAATCAATGTGCCCA+AGG | - | chr5.2:7659749-7659768 | MS.gene09575:intron | 30.0% | |
ACGACTTGACATTGTTTATA+TGG | - | chr5.2:7658937-7658956 | MS.gene09575:intron | 30.0% | |
AGACTGAATTAACTTTCACA+GGG | + | chr5.2:7658438-7658457 | None:intergenic | 30.0% | |
ATGATATTCCAATTACACAG+GGG | - | chr5.2:7657882-7657901 | MS.gene09575:CDS | 30.0% | |
ATTAAAATCAATGTGCCCAA+GGG | - | chr5.2:7659750-7659769 | MS.gene09575:intron | 30.0% | |
GTTCAAAAGTTGTCAAAAAG+TGG | - | chr5.2:7659536-7659555 | MS.gene09575:CDS | 30.0% | |
TAGAATTGGGAAGATTTGAT+GGG | - | chr5.2:7658530-7658549 | MS.gene09575:intron | 30.0% | |
TATTGGTCAAAAACAATGGA+GGG | - | chr5.2:7659460-7659479 | MS.gene09575:intron | 30.0% | |
TTATTGGTCAAAAACAATGG+AGG | - | chr5.2:7659459-7659478 | MS.gene09575:intron | 30.0% | |
! | CTGACAATGTTTTCAACATT+AGG | + | chr5.2:7657696-7657715 | None:intergenic | 30.0% |
!! | TGAAATTTGAATTTTCAGGC+AGG | - | chr5.2:7658490-7658509 | MS.gene09575:intron | 30.0% |
AACCAATGCAATAACATCAC+GGG | + | chr5.2:7658086-7658105 | None:intergenic | 35.0% | |
AAGCATCTGAGTTAGATCTT+AGG | - | chr5.2:7659222-7659241 | MS.gene09575:intron | 35.0% | |
ACAGAAATGATTGCACTTTC+AGG | - | chr5.2:7658652-7658671 | MS.gene09575:intron | 35.0% | |
ACCATACTATGAGGTAGAAT+TGG | - | chr5.2:7658516-7658535 | MS.gene09575:intron | 35.0% | |
ACCCTCAAACAGTATAATGA+GGG | + | chr5.2:7658799-7658818 | None:intergenic | 35.0% | |
ACCCTCATTATACTGTTTGA+GGG | - | chr5.2:7658795-7658814 | MS.gene09575:intron | 35.0% | |
ACTGGCACCCTTTAATTAAT+TGG | + | chr5.2:7658711-7658730 | None:intergenic | 35.0% | |
CAAGAATCTACAAAAGGGAA+AGG | - | chr5.2:7659840-7659859 | MS.gene09575:CDS | 35.0% | |
CAGCACAAGAAACTTTATTC+TGG | + | chr5.2:7658045-7658064 | None:intergenic | 35.0% | |
CAGCCAATGAAAGATTATCA+GGG | + | chr5.2:7657964-7657983 | None:intergenic | 35.0% | |
CCATACTATGAGGTAGAATT+GGG | - | chr5.2:7658517-7658536 | MS.gene09575:intron | 35.0% | |
CCTGAAATTGTACACTCTAT+CGG | + | chr5.2:7659683-7659702 | None:intergenic | 35.0% | |
CGTAGTGTAAGTCTAATGTA+GGG | + | chr5.2:7659723-7659742 | None:intergenic | 35.0% | |
GAAACTTTATTCTGGCAAAG+AGG | + | chr5.2:7658037-7658056 | None:intergenic | 35.0% | |
GAATCATGTCAATCAACACT+AGG | + | chr5.2:7659608-7659627 | None:intergenic | 35.0% | |
GTAGAATTGGGAAGATTTGA+TGG | - | chr5.2:7658529-7658548 | MS.gene09575:intron | 35.0% | |
GTAGTGGTGTCTACTTAATT+GGG | + | chr5.2:7657661-7657680 | None:intergenic | 35.0% | |
GTGTCAAGAATTCACACAAT+GGG | - | chr5.2:7659992-7660011 | MS.gene09575:CDS | 35.0% | |
TACCCTCAAACAGTATAATG+AGG | + | chr5.2:7658800-7658819 | None:intergenic | 35.0% | |
TAGGACAAGAATTCTTGTAG+TGG | + | chr5.2:7657677-7657696 | None:intergenic | 35.0% | |
TCAATATGTCTCATGCATGT+TGG | + | chr5.2:7658754-7658773 | None:intergenic | 35.0% | |
TCACCCTGATAATCTTTCAT+TGG | - | chr5.2:7657958-7657977 | MS.gene09575:CDS | 35.0% | |
TGTAGTGGTGTCTACTTAAT+TGG | + | chr5.2:7657662-7657681 | None:intergenic | 35.0% | |
! | TAGACATTATCAAAGGCATG+TGG | + | chr5.2:7659817-7659836 | None:intergenic | 35.0% |
! | TTGTGCTGATATTCTAGCTA+TGG | - | chr5.2:7658057-7658076 | MS.gene09575:intron | 35.0% |
!! | AAAAGCATTTACTGCAGCTT+TGG | + | chr5.2:7659908-7659927 | None:intergenic | 35.0% |
!! | AATTTGAATTTTCAGGCAGG+AGG | - | chr5.2:7658493-7658512 | MS.gene09575:intron | 35.0% |
!! | GTAGTATTTCTAGTGGTTGT+CGG | - | chr5.2:7659291-7659310 | MS.gene09575:intron | 35.0% |
!! | TTGAAGGGTAGTATTTCTAG+TGG | - | chr5.2:7659284-7659303 | MS.gene09575:intron | 35.0% |
!!! | GACAACTTTTTTGACAACCT+TGG | - | chr5.2:7659424-7659443 | MS.gene09575:intron | 35.0% |
AACCCGTGATGTTATTGCAT+TGG | - | chr5.2:7658081-7658100 | MS.gene09575:intron | 40.0% | |
AACTCTACCCAATTTGGTCA+TGG | + | chr5.2:7659971-7659990 | None:intergenic | 40.0% | |
ACACAATGGGAACATTCGTA+CGG | - | chr5.2:7660005-7660024 | MS.gene09575:CDS | 40.0% | |
ACATGATTCATTCCCTCTGT+AGG | - | chr5.2:7659619-7659638 | MS.gene09575:CDS | 40.0% | |
AGGGAGAAAAAAGAAGAGAG+AGG | - | chr5.2:7659479-7659498 | MS.gene09575:intron | 40.0% | |
ATGACCAAATTGGGTAGAGT+TGG | - | chr5.2:7659970-7659989 | MS.gene09575:CDS | 40.0% | |
CCAGCCAATGAAAGATTATC+AGG | + | chr5.2:7657965-7657984 | None:intergenic | 40.0% | |
CCCAATTCTACCTCATAGTA+TGG | + | chr5.2:7658520-7658539 | None:intergenic | 40.0% | |
CCGATAGAGTGTACAATTTC+AGG | - | chr5.2:7659680-7659699 | MS.gene09575:CDS | 40.0% | |
CCTGATAATCTTTCATTGGC+TGG | - | chr5.2:7657962-7657981 | MS.gene09575:CDS | 40.0% | |
CTACTTAATTGGGCATGAGT+AGG | + | chr5.2:7657651-7657670 | None:intergenic | 40.0% | |
GACCCTCATTATACTGTTTG+AGG | - | chr5.2:7658794-7658813 | MS.gene09575:intron | 40.0% | |
GCGTAGTGTAAGTCTAATGT+AGG | + | chr5.2:7659724-7659743 | None:intergenic | 40.0% | |
GGTGTCAAGAATTCACACAA+TGG | - | chr5.2:7659991-7660010 | MS.gene09575:CDS | 40.0% | |
GTTGCAATGTGAGAATCCAA+CGG | + | chr5.2:7659653-7659672 | None:intergenic | 40.0% | |
TTACCTGAACAAAGCAGTCA+TGG | + | chr5.2:7657785-7657804 | None:intergenic | 40.0% | |
! | AATCTTTCATTGGCTGGAGA+TGG | - | chr5.2:7657968-7657987 | MS.gene09575:CDS | 40.0% |
! | ACTGTTTGAGGGTATGAATG+AGG | - | chr5.2:7658806-7658825 | MS.gene09575:intron | 40.0% |
! | CAAAGGCATGTGGAGTAATT+GGG | + | chr5.2:7659807-7659826 | None:intergenic | 40.0% |
! | CTGTTTGAGGGTATGAATGA+GGG | - | chr5.2:7658807-7658826 | MS.gene09575:intron | 40.0% |
! | GGATCATCTAGAACAGCATT+AGG | - | chr5.2:7658384-7658403 | MS.gene09575:intron | 40.0% |
! | TCAAAGGCATGTGGAGTAAT+TGG | + | chr5.2:7659808-7659827 | None:intergenic | 40.0% |
AATGGAAAACTTCCTGAGCC+AGG | - | chr5.2:7658577-7658596 | MS.gene09575:intron | 45.0% | |
AGTGTAAACCGTAAACCACG+CGG | + | chr5.2:7658685-7658704 | None:intergenic | 45.0% | |
ATGGAAGAAGAGACGTAGAG+TGG | + | chr5.2:7657766-7657785 | None:intergenic | 45.0% | |
GACACCAACTCTACCCAATT+TGG | + | chr5.2:7659977-7659996 | None:intergenic | 45.0% | |
GCCACATAATAGAGCAGAGA+GGG | - | chr5.2:7657934-7657953 | MS.gene09575:CDS | 45.0% | |
GTTGCTGCCATGACCAAATT+GGG | - | chr5.2:7659961-7659980 | MS.gene09575:CDS | 45.0% | |
TAATGAGGGTCGCATAGCAT+AGG | + | chr5.2:7658785-7658804 | None:intergenic | 45.0% | |
TATACAAGCCAAAGCAGCTG+TGG | - | chr5.2:7658003-7658022 | MS.gene09575:intron | 45.0% | |
TCCATATCAACTGCAACCCT+TGG | + | chr5.2:7659784-7659803 | None:intergenic | 45.0% | |
TCCCTCTCTGCTCTATTATG+TGG | + | chr5.2:7657938-7657957 | None:intergenic | 45.0% | |
TGGATCTTGAATCCGTGAAG+AGG | + | chr5.2:7659888-7659907 | None:intergenic | 45.0% | |
TGTTGCTGCCATGACCAAAT+TGG | - | chr5.2:7659960-7659979 | MS.gene09575:CDS | 45.0% | |
TTGAATCCGTGAAGAGGACT+TGG | + | chr5.2:7659882-7659901 | None:intergenic | 45.0% | |
! | CTTCCATGACTGCTTTGTTC+AGG | - | chr5.2:7657779-7657798 | MS.gene09575:CDS | 45.0% |
! | GAGGGTATGAATGAGGGTAT+TGG | - | chr5.2:7658813-7658832 | MS.gene09575:intron | 45.0% |
! | TCCAAGGGTTGCAGTTGATA+TGG | - | chr5.2:7659780-7659799 | MS.gene09575:intron | 45.0% |
!! | AGCTGGTTCAAGTTGAATCC+TGG | + | chr5.2:7658598-7658617 | None:intergenic | 45.0% |
!! | TTCAAGTTGAATCCTGGCTC+AGG | + | chr5.2:7658592-7658611 | None:intergenic | 45.0% |
!!! | ATTATTTTACATTTATAAAT+TGG | + | chr5.2:7659325-7659344 | None:intergenic | 5.0% |
AACAGCATCCACAGCTGCTT+TGG | + | chr5.2:7658014-7658033 | None:intergenic | 50.0% | |
AAGAAGAGACGTAGAGTGGC+AGG | + | chr5.2:7657762-7657781 | None:intergenic | 50.0% | |
ATCAATGTGCCCAAGGGATG+TGG | - | chr5.2:7659756-7659775 | MS.gene09575:intron | 50.0% | |
CCATCACACCCCTGTGTAAT+TGG | + | chr5.2:7657893-7657912 | None:intergenic | 50.0% | |
CGCCACATAATAGAGCAGAG+AGG | - | chr5.2:7657933-7657952 | MS.gene09575:CDS | 50.0% | |
CTCAGACCAAGTCCTCTTCA+CGG | - | chr5.2:7659873-7659892 | MS.gene09575:CDS | 50.0% | |
GGTCATGGCAGCAACAAAGT+TGG | + | chr5.2:7659956-7659975 | None:intergenic | 50.0% | |
GGTCGCATAGCATAGGAACA+TGG | + | chr5.2:7658778-7658797 | None:intergenic | 50.0% | |
! | CCAATTACACAGGGGTGTGA+TGG | - | chr5.2:7657890-7657909 | MS.gene09575:CDS | 50.0% |
AACGGTGTGAGCACCTACAG+AGG | + | chr5.2:7659635-7659654 | None:intergenic | 55.0% | |
ACCCTTGGATCCACATCCCT+TGG | + | chr5.2:7659769-7659788 | None:intergenic | 55.0% | |
ACGGTGTGAGCACCTACAGA+GGG | + | chr5.2:7659634-7659653 | None:intergenic | 55.0% | |
CCCAAGGGATGTGGATCCAA+GGG | - | chr5.2:7659765-7659784 | MS.gene09575:intron | 55.0% | |
CCCTTGGATCCACATCCCTT+GGG | + | chr5.2:7659768-7659787 | None:intergenic | 55.0% | |
GGCAGGAGGACCATACTATG+AGG | - | chr5.2:7658507-7658526 | MS.gene09575:intron | 55.0% | |
GTAATGCGCCGCGTGGTTTA+CGG | - | chr5.2:7658674-7658693 | MS.gene09575:intron | 55.0% | |
TCTGTAGGTGCTCACACCGT+TGG | - | chr5.2:7659634-7659653 | MS.gene09575:CDS | 55.0% | |
! | CGTGAAGAGGACTTGGTCTG+AGG | + | chr5.2:7659875-7659894 | None:intergenic | 55.0% |
GCCCAAGGGATGTGGATCCA+AGG | - | chr5.2:7659764-7659783 | MS.gene09575:intron | 60.0% | |
! | CTTTCAGGTAATGCGCCGCG+TGG | - | chr5.2:7658667-7658686 | MS.gene09575:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 7657585 | 7660044 | 7657585 | ID=MS.gene09575 |
chr5.2 | mRNA | 7657585 | 7660044 | 7657585 | ID=MS.gene09575.t1;Parent=MS.gene09575 |
chr5.2 | exon | 7659829 | 7660044 | 7659829 | ID=MS.gene09575.t1.exon1;Parent=MS.gene09575.t1 |
chr5.2 | CDS | 7659829 | 7660044 | 7659829 | ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1 |
chr5.2 | exon | 7659527 | 7659727 | 7659527 | ID=MS.gene09575.t1.exon2;Parent=MS.gene09575.t1 |
chr5.2 | CDS | 7659527 | 7659727 | 7659527 | ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1 |
chr5.2 | exon | 7658956 | 7659121 | 7658956 | ID=MS.gene09575.t1.exon3;Parent=MS.gene09575.t1 |
chr5.2 | CDS | 7658956 | 7659121 | 7658956 | ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1 |
chr5.2 | exon | 7657585 | 7657988 | 7657585 | ID=MS.gene09575.t1.exon4;Parent=MS.gene09575.t1 |
chr5.2 | CDS | 7657585 | 7657988 | 7657585 | ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1 |
Gene Sequence |
Protein sequence |