AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09575


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09575.t1 MTR_5g016010 96.646 328 11 0 1 328 1 328 0.0 657
MS.gene09575.t1 MTR_4g095450 71.037 328 90 1 1 328 1 323 5.16e-179 498
MS.gene09575.t1 MTR_4g127670 67.110 301 96 2 26 326 23 320 2.85e-151 427
MS.gene09575.t1 MTR_1g009750 61.006 318 120 3 12 328 13 327 1.77e-142 405
MS.gene09575.t1 MTR_7g029030 58.307 319 126 3 8 326 6 317 1.23e-128 370
MS.gene09575.t1 MTR_1g009750 55.975 318 119 4 12 328 13 310 2.92e-126 364
MS.gene09575.t1 MTR_8g062780 43.789 322 177 3 6 325 1 320 1.33e-89 271
MS.gene09575.t1 MTR_0286s0010 42.679 321 178 4 10 328 17 333 4.50e-85 260
MS.gene09575.t1 MTR_6g008075 42.679 321 178 4 10 328 17 333 4.50e-85 260
MS.gene09575.t1 MTR_3g092990 42.947 319 178 3 11 328 10 325 4.53e-84 257
MS.gene09575.t1 MTR_1g090760 41.956 317 177 4 14 325 12 326 3.67e-83 255
MS.gene09575.t1 MTR_4g087965 42.810 306 169 4 26 327 41 344 2.62e-81 251
MS.gene09575.t1 MTR_1g101830 41.641 329 177 8 2 328 6 321 4.76e-79 244
MS.gene09575.t1 MTR_2g029860 41.772 316 178 4 16 328 17 329 1.71e-78 244
MS.gene09575.t1 MTR_2g029815 41.141 333 187 5 1 328 1 329 1.72e-78 243
MS.gene09575.t1 MTR_2g029850 41.141 333 187 5 1 328 1 329 9.59e-78 241
MS.gene09575.t1 MTR_5g022870 41.538 325 175 7 7 328 3 315 2.43e-77 239
MS.gene09575.t1 MTR_2g029820 41.141 333 187 5 1 328 1 329 4.00e-77 240
MS.gene09575.t1 MTR_1g025980 40.248 323 179 7 8 328 7 317 6.49e-76 236
MS.gene09575.t1 MTR_8g075100 42.532 308 164 5 23 328 22 318 1.52e-75 235
MS.gene09575.t1 MTR_2g029800 39.458 332 194 4 1 328 1 329 6.89e-75 234
MS.gene09575.t1 MTR_3g092990 41.693 319 171 5 11 328 10 314 1.31e-74 233
MS.gene09575.t1 MTR_1g077000 39.222 334 183 7 1 328 7 326 2.93e-74 232
MS.gene09575.t1 MTR_2g088770 39.875 321 186 5 10 328 9 324 6.53e-74 231
MS.gene09575.t1 MTR_2g029750 39.640 333 192 6 1 328 1 329 9.16e-74 231
MS.gene09575.t1 MTR_2g084020 38.906 329 188 5 1 328 1 317 2.41e-73 229
MS.gene09575.t1 MTR_4g046713 40.752 319 184 2 11 328 11 325 8.64e-73 228
MS.gene09575.t1 MTR_2g084090 40.248 323 175 7 12 328 7 317 9.62e-73 228
MS.gene09575.t1 MTR_2g029740 38.739 333 195 6 1 328 1 329 1.83e-72 228
MS.gene09575.t1 MTR_2g084010 38.906 329 188 5 1 328 1 317 2.74e-72 226
MS.gene09575.t1 MTR_2g028980 39.940 333 191 6 1 328 1 329 3.17e-72 228
MS.gene09575.t1 MTR_2g029830 41.100 309 175 4 23 328 24 328 9.03e-72 226
MS.gene09575.t1 MTR_7g107520 40.673 327 184 7 3 328 2 319 1.12e-71 225
MS.gene09575.t1 MTR_4g114210 40.673 327 177 7 7 326 1 317 4.58e-71 223
MS.gene09575.t1 MTR_2g040000 37.846 325 190 6 10 328 12 330 6.66e-71 223
MS.gene09575.t1 MTR_7g093370 39.319 323 184 6 7 325 53 367 1.72e-70 224
MS.gene09575.t1 MTR_2g084080 37.931 319 187 4 11 328 8 316 1.84e-70 222
MS.gene09575.t1 MTR_1g086320 39.645 338 188 8 1 328 1 332 2.61e-70 222
MS.gene09575.t1 MTR_4g125940 38.700 323 189 4 10 328 11 328 3.61e-70 221
MS.gene09575.t1 MTR_8g076820 39.297 313 182 4 21 328 20 329 9.99e-70 220
MS.gene09575.t1 MTR_2g084110 38.125 320 185 4 12 328 7 316 1.00e-69 220
MS.gene09575.t1 MTR_3g094650 38.485 330 186 7 1 325 1 318 1.62e-69 219
MS.gene09575.t1 MTR_2g029910 40.419 334 187 8 2 328 3 331 3.20e-69 220
MS.gene09575.t1 MTR_7g072510 37.500 328 188 5 1 328 1 311 9.19e-69 217
MS.gene09575.t1 MTR_1g086490 39.420 345 186 8 1 328 1 339 1.48e-68 218
MS.gene09575.t1 MTR_2g029560 38.138 333 192 8 1 328 1 324 1.58e-68 218
MS.gene09575.t1 MTR_4g133800 39.465 299 169 6 31 328 45 332 3.59e-68 216
MS.gene09575.t1 MTR_7g086820 39.934 303 172 5 25 327 18 310 3.67e-68 216
MS.gene09575.t1 MTR_7g072480 38.344 326 189 4 4 328 1 315 5.75e-68 215
MS.gene09575.t1 MTR_4g031140 37.255 306 186 4 23 328 24 323 1.16e-67 215
MS.gene09575.t1 MTR_2g029730 37.462 331 198 5 1 328 1 325 1.19e-67 216
MS.gene09575.t1 MTR_1g054205 37.421 318 192 5 11 325 9 322 1.77e-67 214
MS.gene09575.t1 MTR_5g021060 39.867 301 175 4 30 328 33 329 2.13e-67 214
MS.gene09575.t1 MTR_1g038680 40.132 304 169 8 32 328 34 331 2.31e-67 214
MS.gene09575.t1 MTR_4g029170 36.646 322 185 6 13 325 6 317 2.41e-66 211
MS.gene09575.t1 MTR_4g030890 38.047 297 178 4 32 328 105 395 2.32e-65 212
MS.gene09575.t1 MTR_4g029200 38.312 308 178 5 22 328 41 337 2.97e-65 209
MS.gene09575.t1 MTR_5g074970 38.154 325 181 8 7 325 12 322 6.47e-65 208
MS.gene09575.t1 MTR_5g017860 34.783 322 203 5 9 328 9 325 7.52e-65 207
MS.gene09575.t1 MTR_6g043240 38.788 330 181 8 6 328 15 330 9.52e-65 208
MS.gene09575.t1 MTR_5g017850 35.276 326 197 7 6 328 11 325 1.82e-64 207
MS.gene09575.t1 MTR_0155s0040 37.117 326 185 6 8 328 4 314 1.87e-64 206
MS.gene09575.t1 MTR_2g008710 34.862 327 200 6 5 326 4 322 2.01e-64 206
MS.gene09575.t1 MTR_2g084000 36.615 325 193 6 7 328 4 318 1.14e-63 204
MS.gene09575.t1 MTR_7g086870 40.404 297 162 6 32 327 27 309 1.18e-63 204
MS.gene09575.t1 MTR_5g083860 37.037 324 188 6 5 325 11 321 1.93e-63 204
MS.gene09575.t1 MTR_3g094670 38.066 331 186 7 1 325 1 318 3.20e-63 203
MS.gene09575.t1 MTR_3g072190 37.072 321 192 3 8 328 7 317 5.56e-63 202
MS.gene09575.t1 MTR_3g105790 35.976 328 199 5 1 326 1 319 6.11e-63 202
MS.gene09575.t1 MTR_2g437770 37.624 303 176 7 27 328 50 340 7.53e-63 203
MS.gene09575.t1 MTR_3g466200 37.846 325 178 8 6 325 11 316 7.54e-63 202
MS.gene09575.t1 MTR_4g083710 37.618 319 186 5 14 328 14 323 1.24e-62 202
MS.gene09575.t1 MTR_4g029180 37.037 297 177 4 30 325 30 317 1.29e-62 202
MS.gene09575.t1 MTR_6g043280 35.258 329 196 6 6 328 14 331 1.09e-61 200
MS.gene09575.t1 MTR_5g074860 36.420 324 190 8 7 325 9 321 1.48e-61 199
MS.gene09575.t1 MTR_2g008160 37.742 310 178 7 23 326 20 320 4.52e-61 198
MS.gene09575.t1 MTR_3g094630 38.066 331 186 7 1 325 1 318 1.18e-60 197
MS.gene09575.t1 MTR_2g029830 41.923 260 144 4 72 328 5 260 4.54e-60 194
MS.gene09575.t1 MTR_4g122640 35.922 309 188 7 23 328 34 335 6.38e-60 195
MS.gene09575.t1 MTR_4g125940 40.959 271 151 4 62 328 8 273 1.08e-59 193
MS.gene09575.t1 MTR_4g074995 37.072 321 176 6 12 328 9 307 1.23e-59 194
MS.gene09575.t1 MTR_5g074760 36.778 329 189 8 2 325 3 317 1.54e-58 191
MS.gene09575.t1 MTR_6g043460 36.503 326 189 6 7 325 10 324 1.57e-58 192
MS.gene09575.t1 MTR_6g027440 36.957 322 191 6 4 325 1 310 2.21e-58 191
MS.gene09575.t1 MTR_5g074740 36.474 329 190 8 2 325 3 317 4.64e-58 190
MS.gene09575.t1 MTR_4g029190 37.500 296 171 6 36 328 55 339 6.94e-58 190
MS.gene09575.t1 MTR_3g467600 36.890 328 187 8 6 328 11 323 4.34e-57 187
MS.gene09575.t1 MTR_5g014100 35.737 319 192 5 18 328 17 330 6.75e-57 187
MS.gene09575.t1 MTR_5g074710 36.170 329 191 8 2 325 3 317 7.38e-57 187
MS.gene09575.t1 MTR_1g115900 37.346 324 183 9 13 328 9 320 9.41e-57 187
MS.gene09575.t1 MTR_5g049280 33.861 316 191 8 23 328 29 336 7.82e-56 185
MS.gene09575.t1 MTR_1g022970 35.880 301 188 3 27 325 46 343 1.27e-55 184
MS.gene09575.t1 MTR_2g099175 33.981 309 183 5 26 325 35 331 1.78e-55 184
MS.gene09575.t1 MTR_2g067440 32.749 342 195 6 17 328 50 386 2.21e-55 185
MS.gene09575.t1 MTR_7g026990 33.846 325 202 7 6 328 8 321 5.46e-55 182
MS.gene09575.t1 MTR_4g132490 32.219 329 210 6 4 325 1 323 1.89e-54 181
MS.gene09575.t1 MTR_3g466180 35.404 322 193 5 5 325 12 319 4.66e-53 177
MS.gene09575.t1 MTR_4g074990 32.923 325 189 6 8 328 5 304 3.59e-52 174
MS.gene09575.t1 MTR_2g077990 32.036 334 191 6 25 326 74 403 1.45e-51 176
MS.gene09575.t1 MTR_2g078610 31.437 334 193 7 25 326 74 403 6.32e-51 174
MS.gene09575.t1 MTR_3g072190 37.838 259 151 3 70 328 2 250 3.99e-50 167
MS.gene09575.t1 MTR_1g066710 35.179 307 187 5 25 328 25 322 2.26e-49 167
MS.gene09575.t1 MTR_1g066640 35.505 307 186 5 25 328 25 322 5.70e-49 167
MS.gene09575.t1 MTR_4g132110 33.882 304 189 5 27 327 32 326 6.32e-49 167
MS.gene09575.t1 MTR_2g078280 32.399 321 181 6 25 313 74 390 9.46e-49 168
MS.gene09575.t1 MTR_3g105790 37.860 243 145 3 86 326 5 243 2.84e-48 162
MS.gene09575.t1 MTR_1g066380 35.048 311 182 6 25 328 25 322 3.03e-48 165
MS.gene09575.t1 MTR_2g008730 30.091 329 193 6 3 326 2 298 1.32e-47 162
MS.gene09575.t1 MTR_5g033470 33.010 309 193 7 25 325 71 373 1.52e-47 164
MS.gene09575.t1 MTR_2g008160 33.333 312 154 7 23 326 20 285 5.16e-47 160
MS.gene09575.t1 MTR_4g132110 33.333 309 189 7 27 327 32 331 5.37e-47 162
MS.gene09575.t1 MTR_0147s0010 33.230 322 178 7 27 328 77 381 5.48e-47 163
MS.gene09575.t1 MTR_1g066680 34.740 308 186 6 25 328 25 321 1.69e-45 157
MS.gene09575.t1 MTR_4g074980 35.385 260 153 6 6 261 5 253 8.30e-44 151
MS.gene09575.t1 MTR_4g074980 30.887 327 184 8 6 328 5 293 8.94e-43 149
MS.gene09575.t1 MTR_2g067450 32.692 312 191 9 25 328 9 309 2.46e-41 146
MS.gene09575.t1 MTR_5g074860 30.864 324 169 7 7 325 9 282 3.77e-40 142
MS.gene09575.t1 MTR_2g029880 40.206 194 104 3 137 328 4 187 5.87e-39 137
MS.gene09575.t1 MTR_1g066380 35.094 265 152 6 71 328 3 254 3.04e-35 129
MS.gene09575.t1 MTR_2g008160 37.438 203 104 6 23 222 20 202 3.98e-35 127
MS.gene09575.t1 MTR_5g074700 35.808 229 122 7 103 328 7 213 3.27e-33 122
MS.gene09575.t1 MTR_3g072210 38.503 187 106 4 141 325 55 234 6.44e-32 119
MS.gene09575.t1 MTR_7g072490 31.933 238 96 6 73 309 2 174 2.35e-26 104
MS.gene09575.t1 MTR_7g086790 36.126 191 97 6 74 264 17 182 3.92e-25 100
MS.gene09575.t1 MTR_2g078560 26.941 219 129 3 139 326 99 317 1.63e-23 99.0
MS.gene09575.t1 MTR_4g031040 33.784 148 79 3 122 267 5 135 1.44e-22 92.0
MS.gene09575.t1 MTR_5g058120 31.875 160 98 2 166 325 7 155 7.40e-18 82.0
MS.gene09575.t1 MTR_3g072260 37.121 132 76 3 10 137 5 133 3.41e-17 77.4
MS.gene09575.t1 MTR_1g098320 47.368 76 40 0 252 327 47 122 3.16e-16 74.7
MS.gene09575.t1 MTR_3g107060 32.022 178 93 7 47 212 92 253 2.43e-15 75.9
MS.gene09575.t1 MTR_4g114220 34.586 133 56 4 7 139 1 102 6.99e-14 68.6
MS.gene09575.t1 MTR_3g462850 30.282 142 90 6 194 328 9 148 1.04e-13 68.2
MS.gene09575.t1 MTR_4g012865 45.161 62 34 0 32 93 82 143 4.05e-13 66.6
MS.gene09575.t1 MTR_7g107500 39.583 96 56 2 233 328 3 96 4.71e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09575.t1 AT3G49960 62.769 325 121 0 1 325 1 325 2.65e-153 433
MS.gene09575.t1 AT4G37530 66.007 303 103 0 23 325 23 325 1.19e-152 431
MS.gene09575.t1 AT5G67400 61.846 325 124 0 1 325 1 325 2.90e-151 428
MS.gene09575.t1 AT4G37520 64.452 301 107 0 25 325 25 325 1.96e-149 423
MS.gene09575.t1 AT4G30170 63.158 304 108 1 25 328 25 324 8.71e-148 419
MS.gene09575.t1 AT4G37520 64.120 301 105 1 25 325 25 322 2.62e-146 415
MS.gene09575.t1 AT2G18980 61.635 318 118 1 11 328 9 322 2.66e-146 415
MS.gene09575.t1 AT4G37530 68.077 260 83 0 23 282 23 282 1.19e-134 384
MS.gene09575.t1 AT5G14130 54.688 320 141 3 7 326 12 327 8.79e-119 345
MS.gene09575.t1 AT5G14130 54.688 320 141 3 7 326 53 368 2.05e-118 346
MS.gene09575.t1 AT4G17690 44.984 309 161 4 18 325 18 318 1.08e-93 281
MS.gene09575.t1 AT5G47000 46.358 302 155 3 25 325 31 326 3.05e-90 273
MS.gene09575.t1 AT2G34060 43.831 308 167 4 24 327 39 344 6.38e-87 265
MS.gene09575.t1 AT5G40150 45.752 306 158 4 24 328 29 327 1.83e-85 261
MS.gene09575.t1 AT3G28200 41.883 308 166 4 24 328 18 315 6.56e-82 251
MS.gene09575.t1 AT3G21770 42.857 308 167 6 23 327 25 326 2.01e-78 243
MS.gene09575.t1 AT5G51890 40.867 323 181 7 8 328 7 321 2.50e-78 242
MS.gene09575.t1 AT5G42180 41.975 324 175 8 4 325 1 313 7.46e-78 241
MS.gene09575.t1 AT1G05260 41.159 328 184 6 4 327 1 323 9.40e-78 241
MS.gene09575.t1 AT1G24110 41.139 316 182 3 11 325 6 318 1.42e-77 240
MS.gene09575.t1 AT1G71695 39.940 333 179 6 6 326 13 336 1.90e-74 233
MS.gene09575.t1 AT5G06730 38.769 325 187 4 6 328 19 333 6.56e-74 232
MS.gene09575.t1 AT3G49120 39.571 326 187 5 10 328 12 334 7.81e-73 229
MS.gene09575.t1 AT3G49110 40.184 326 185 5 10 328 13 335 3.48e-72 228
MS.gene09575.t1 AT3G03670 38.050 318 186 5 11 325 8 317 6.77e-72 226
MS.gene09575.t1 AT3G32980 39.571 326 187 5 10 328 11 333 7.31e-72 226
MS.gene09575.t1 AT3G01190 39.264 326 188 7 1 325 1 317 2.22e-71 224
MS.gene09575.t1 AT4G11290 38.369 331 195 6 1 328 1 325 1.22e-70 223
MS.gene09575.t1 AT4G08780 41.290 310 175 4 23 328 20 326 1.20e-69 221
MS.gene09575.t1 AT4G08770 40.968 310 176 4 23 328 20 326 1.64e-69 220
MS.gene09575.t1 AT2G38380 37.695 321 194 4 11 328 15 332 3.52e-69 219
MS.gene09575.t1 AT4G36430 38.245 319 193 3 11 328 14 329 6.29e-69 218
MS.gene09575.t1 AT5G17820 38.318 321 178 6 5 325 9 309 6.72e-69 218
MS.gene09575.t1 AT5G19880 37.578 322 193 5 9 325 7 325 7.53e-69 218
MS.gene09575.t1 AT2G18140 39.597 298 176 3 32 328 40 334 7.65e-69 218
MS.gene09575.t1 AT5G15180 36.527 334 200 7 1 328 1 328 1.28e-68 218
MS.gene09575.t1 AT4G31760 39.506 324 180 6 11 328 12 325 1.45e-68 217
MS.gene09575.t1 AT5G06720 39.216 306 179 5 23 325 28 329 1.77e-68 217
MS.gene09575.t1 AT2G38390 37.383 321 195 4 11 328 15 332 2.01e-68 218
MS.gene09575.t1 AT5G17820 39.297 313 177 5 13 325 63 362 2.98e-68 218
MS.gene09575.t1 AT2G18150 37.462 331 196 5 6 328 8 335 9.80e-68 216
MS.gene09575.t1 AT4G33420 38.226 327 184 7 6 328 12 324 4.26e-67 213
MS.gene09575.t1 AT2G22420 37.231 325 197 5 4 328 1 318 4.53e-67 214
MS.gene09575.t1 AT1G05240 39.604 303 174 5 27 326 26 322 8.86e-67 213
MS.gene09575.t1 AT1G05250 39.604 303 174 5 27 326 26 322 8.86e-67 213
MS.gene09575.t1 AT4G33420 38.226 327 184 7 6 328 59 371 2.62e-66 213
MS.gene09575.t1 AT1G14540 36.533 323 190 5 7 328 6 314 1.22e-65 209
MS.gene09575.t1 AT5G64120 38.047 297 175 5 32 328 40 327 2.84e-65 209
MS.gene09575.t1 AT5G19890 37.963 324 188 6 9 328 12 326 3.13e-65 209
MS.gene09575.t1 AT4G16270 39.333 300 172 8 32 328 55 347 4.68e-65 209
MS.gene09575.t1 AT5G05340 38.361 305 174 5 24 325 27 320 6.20e-64 205
MS.gene09575.t1 AT5G66390 39.189 296 174 4 32 325 38 329 7.57e-64 206
MS.gene09575.t1 AT2G41480 37.231 325 191 5 9 328 11 327 8.43e-64 205
MS.gene09575.t1 AT2G39040 38.782 312 179 7 24 328 43 349 1.79e-63 205
MS.gene09575.t1 AT3G50990 35.474 327 206 4 1 325 14 337 2.26e-63 204
MS.gene09575.t1 AT1G34510 37.461 323 183 7 4 325 1 305 4.03e-63 203
MS.gene09575.t1 AT5G64110 36.533 323 190 6 12 328 16 329 5.04e-63 203
MS.gene09575.t1 AT2G24800 37.097 310 179 6 25 328 29 328 2.25e-62 201
MS.gene09575.t1 AT1G14550 36.364 330 198 6 1 328 1 320 2.57e-62 201
MS.gene09575.t1 AT5G58400 38.080 323 181 8 8 325 13 321 2.75e-62 201
MS.gene09575.t1 AT1G77100 37.195 328 187 8 6 326 1 316 4.62e-62 200
MS.gene09575.t1 AT1G49570 33.724 341 202 7 4 325 11 346 2.50e-61 199
MS.gene09575.t1 AT5G39580 36.615 325 193 9 8 328 3 318 4.82e-61 197
MS.gene09575.t1 AT4G26010 35.826 321 188 7 8 327 4 307 5.21e-61 197
MS.gene09575.t1 AT4G26010 36.025 322 186 8 8 327 32 335 9.29e-61 197
MS.gene09575.t1 AT1G30870 38.312 308 176 7 22 326 46 342 6.46e-60 196
MS.gene09575.t1 AT4G33870 32.544 338 189 5 24 326 65 398 1.50e-59 196
MS.gene09575.t1 AT1G44970 36.482 307 190 3 24 328 42 345 3.72e-59 194
MS.gene09575.t1 AT2G43480 34.084 311 189 6 22 325 30 331 1.84e-58 191
MS.gene09575.t1 AT5G22410 34.568 324 195 9 7 325 10 321 3.05e-57 188
MS.gene09575.t1 AT5G58390 37.846 325 184 8 6 325 1 312 6.05e-57 187
MS.gene09575.t1 AT5G24070 34.951 309 185 6 26 327 34 333 2.32e-56 186
MS.gene09575.t1 AT5G64100 35.333 300 180 6 32 328 42 330 2.73e-55 183
MS.gene09575.t1 AT4G25980 34.091 308 189 5 25 326 24 323 5.87e-55 182
MS.gene09575.t1 AT2G35380 34.441 331 202 7 9 328 8 334 6.57e-53 177
MS.gene09575.t1 AT1G68850 31.361 338 214 10 4 328 2 334 1.43e-51 174
MS.gene09575.t1 AT4G21960 32.776 299 189 5 32 327 36 325 4.45e-48 164
MS.gene09575.t1 AT2G37130 33.657 309 192 6 24 328 27 326 3.49e-47 162
MS.gene09575.t1 AT2G37130 33.993 303 187 6 30 328 2 295 1.29e-46 160
MS.gene09575.t1 AT3G17070 32.680 306 191 6 27 325 38 335 1.81e-45 158
MS.gene09575.t1 AT2G35380 35.897 234 140 5 102 328 16 246 1.79e-37 134
MS.gene09575.t1 AT2G24800 38.012 171 99 3 25 195 29 192 2.97e-31 118
MS.gene09575.t1 AT3G17070 30.303 264 168 7 69 325 18 272 2.24e-30 116
MS.gene09575.t1 AT5G39580 40.719 167 91 5 32 198 30 188 3.94e-28 109
MS.gene09575.t1 AT4G25980 38.202 178 101 4 25 201 69 238 4.02e-28 110
MS.gene09575.t1 AT4G32320 28.315 279 153 12 7 267 74 323 5.12e-17 80.9

Find 77 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGTGGTGTCTACTTAAT+TGG 0.165416 5.2:+7659948 None:intergenic
TCAAAGGCATGTGGAGTAAT+TGG 0.184890 5.2:+7657802 None:intergenic
ACAGAAATGATTGCACTTTC+AGG 0.236725 5.2:-7658955 MS.gene09575:intron
CCGATAGAGTGTACAATTTC+AGG 0.237824 5.2:-7657927 MS.gene09575:CDS
TCTAAAGATTCTGATGTAAA+TGG 0.264360 5.2:-7659048 MS.gene09575:CDS
CCAGCCAATGAAAGATTATC+AGG 0.272485 5.2:+7659645 None:intergenic
TGTTGCTGCCATGACCAAAT+TGG 0.291402 5.2:-7657647 MS.gene09575:CDS
CTTCCATGACTGCTTTGTTC+AGG 0.296230 5.2:-7659828 MS.gene09575:intron
GACACCAACTCTACCCAATT+TGG 0.305325 5.2:+7657633 None:intergenic
AGCTTAATCTTATACTTGTT+TGG 0.314208 5.2:-7660015 MS.gene09575:CDS
ACCATACTATGAGGTAGAAT+TGG 0.315906 5.2:-7659091 MS.gene09575:CDS
TCCAAGGGTTGCAGTTGATA+TGG 0.330440 5.2:-7657827 MS.gene09575:CDS
CAGCACAAGAAACTTTATTC+TGG 0.336699 5.2:+7659565 None:intergenic
AACAGCATCCACAGCTGCTT+TGG 0.345598 5.2:+7659596 None:intergenic
CCCAATTCTACCTCATAGTA+TGG 0.385461 5.2:+7659090 None:intergenic
AAAAGCATTTACTGCAGCTT+TGG 0.387024 5.2:+7657702 None:intergenic
GTAGAATTGGGAAGATTTGA+TGG 0.400406 5.2:-7659078 MS.gene09575:CDS
TCACCCTGATAATCTTTCAT+TGG 0.428396 5.2:-7659649 MS.gene09575:CDS
CCTGATAATCTTTCATTGGC+TGG 0.430855 5.2:-7659645 MS.gene09575:CDS
GTAGTGGTGTCTACTTAATT+GGG 0.434010 5.2:+7659949 None:intergenic
CAAAGGCATGTGGAGTAATT+GGG 0.442444 5.2:+7657803 None:intergenic
ACCCTTGGATCCACATCCCT+TGG 0.454377 5.2:+7657841 None:intergenic
AATCTTTCATTGGCTGGAGA+TGG 0.460504 5.2:-7659639 MS.gene09575:CDS
ATCAATGTGCCCAAGGGATG+TGG 0.460713 5.2:-7657851 MS.gene09575:CDS
TTGTGCTGATATTCTAGCTA+TGG 0.463503 5.2:-7659550 MS.gene09575:CDS
GTTTAAACAATGTATTAAGC+TGG 0.467335 5.2:+7658995 None:intergenic
CCATACTATGAGGTAGAATT+GGG 0.468056 5.2:-7659090 MS.gene09575:CDS
TTGAATCCGTGAAGAGGACT+TGG 0.468682 5.2:+7657728 None:intergenic
TCCATATCAACTGCAACCCT+TGG 0.475393 5.2:+7657826 None:intergenic
CTATTTCAAGAATCTACAAA+AGG 0.475878 5.2:-7657773 MS.gene09575:CDS
AGCTGGTTCAAGTTGAATCC+TGG 0.480998 5.2:+7659012 None:intergenic
GTTGCTGCCATGACCAAATT+GGG 0.483030 5.2:-7657646 MS.gene09575:CDS
GCGTAGTGTAAGTCTAATGT+AGG 0.483647 5.2:+7657886 None:intergenic
CTCAGACCAAGTCCTCTTCA+CGG 0.486562 5.2:-7657734 MS.gene09575:CDS
ATACATTGTTTAAACATCAC+GGG 0.490569 5.2:-7658987 MS.gene09575:CDS
CAAGAATCTACAAAAGGGAA+AGG 0.501575 5.2:-7657767 MS.gene09575:CDS
AAGAAGAGACGTAGAGTGGC+AGG 0.502656 5.2:+7659848 None:intergenic
CCCTTGGATCCACATCCCTT+GGG 0.505679 5.2:+7657842 None:intergenic
AAGAATCTACAAAAGGGAAA+GGG 0.508178 5.2:-7657766 MS.gene09575:CDS
AATACATTGTTTAAACATCA+CGG 0.513218 5.2:-7658988 MS.gene09575:CDS
GTGTCAAGAATTCACACAAT+GGG 0.518226 5.2:-7657615 MS.gene09575:CDS
AACCCGTGATGTTATTGCAT+TGG 0.520448 5.2:-7659526 MS.gene09575:intron
TTCAAGTTGAATCCTGGCTC+AGG 0.520683 5.2:+7659018 None:intergenic
TTACCTGAACAAAGCAGTCA+TGG 0.532969 5.2:+7659825 None:intergenic
AATGGAAAACTTCCTGAGCC+AGG 0.533024 5.2:-7659030 MS.gene09575:CDS
TCCCTCTCTGCTCTATTATG+TGG 0.534283 5.2:+7659672 None:intergenic
TCTGTAGGTGCTCACACCGT+TGG 0.536753 5.2:-7657973 MS.gene09575:intron
GAAACTTTATTCTGGCAAAG+AGG 0.538555 5.2:+7659573 None:intergenic
GGTCATGGCAGCAACAAAGT+TGG 0.538768 5.2:+7657654 None:intergenic
CCAATTACACAGGGGTGTGA+TGG 0.539283 5.2:-7659717 MS.gene09575:intron
CCTGAAATTGTACACTCTAT+CGG 0.543139 5.2:+7657927 None:intergenic
AATTAAAATCAATGTGCCCA+AGG 0.543156 5.2:-7657858 MS.gene09575:CDS
TAGAATTGGGAAGATTTGAT+GGG 0.544238 5.2:-7659077 MS.gene09575:CDS
TATTTCAAGAATCTACAAAA+GGG 0.560775 5.2:-7657772 MS.gene09575:CDS
AACCAATGCAATAACATCAC+GGG 0.563893 5.2:+7659524 None:intergenic
CTTGAAATAGACATTATCAA+AGG 0.566475 5.2:+7657786 None:intergenic
GCCCAAGGGATGTGGATCCA+AGG 0.566912 5.2:-7657843 MS.gene09575:CDS
TGGATCTTGAATCCGTGAAG+AGG 0.581662 5.2:+7657722 None:intergenic
ACACAATGGGAACATTCGTA+CGG 0.590337 5.2:-7657602 MS.gene09575:CDS
GCCACATAATAGAGCAGAGA+GGG 0.597026 5.2:-7659673 MS.gene09575:CDS
CTACTTAATTGGGCATGAGT+AGG 0.598762 5.2:+7659959 None:intergenic
CCCAAGGGATGTGGATCCAA+GGG 0.601578 5.2:-7657842 MS.gene09575:CDS
ATTAAAATCAATGTGCCCAA+GGG 0.604041 5.2:-7657857 MS.gene09575:CDS
CGTGAAGAGGACTTGGTCTG+AGG 0.605078 5.2:+7657735 None:intergenic
ATGACCAAATTGGGTAGAGT+TGG 0.605285 5.2:-7657637 MS.gene09575:CDS
AAACCAATGCAATAACATCA+CGG 0.605408 5.2:+7659523 None:intergenic
TATACAAGCCAAAGCAGCTG+TGG 0.607386 5.2:-7659604 MS.gene09575:CDS
AACTCTACCCAATTTGGTCA+TGG 0.620775 5.2:+7657639 None:intergenic
GGCAGGAGGACCATACTATG+AGG 0.631628 5.2:-7659100 MS.gene09575:CDS
CGTAGTGTAAGTCTAATGTA+GGG 0.631745 5.2:+7657887 None:intergenic
CAGCCAATGAAAGATTATCA+GGG 0.640554 5.2:+7659646 None:intergenic
ATGGAAGAAGAGACGTAGAG+TGG 0.643216 5.2:+7659844 None:intergenic
TAGGACAAGAATTCTTGTAG+TGG 0.645111 5.2:+7659933 None:intergenic
TAGACATTATCAAAGGCATG+TGG 0.651893 5.2:+7657793 None:intergenic
GGTGTCAAGAATTCACACAA+TGG 0.671153 5.2:-7657616 MS.gene09575:CDS
GTTGCAATGTGAGAATCCAA+CGG 0.699363 5.2:+7657957 None:intergenic
CGCCACATAATAGAGCAGAG+AGG 0.791379 5.2:-7659674 MS.gene09575:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAATAGATAAAACTT+TGG - chr5.2:7659580-7659599 MS.gene09575:CDS 10.0%
!! AAGTTTAAAAATTAGATTGA+TGG - chr5.2:7658329-7658348 MS.gene09575:intron 15.0%
!! AGAAAAATAAAGATATTGAA+GGG - chr5.2:7659269-7659288 MS.gene09575:intron 15.0%
!! TAGAAAAATAAAGATATTGA+AGG - chr5.2:7659268-7659287 MS.gene09575:intron 15.0%
!! AATAAAAAGTGAAAAAACCA+AGG + chr5.2:7659444-7659463 None:intergenic 20.0%
!! AATACATTGTTTAAACATCA+CGG - chr5.2:7658619-7658638 MS.gene09575:intron 20.0%
!! AGTAATCATTCTTAAAAAGT+TGG - chr5.2:7659349-7659368 MS.gene09575:intron 20.0%
!! GAAAAGGTAACATTTATTTA+TGG + chr5.2:7657841-7657860 None:intergenic 20.0%
!! TAGGATAATTAAAATAGTCA+CGG + chr5.2:7658233-7658252 None:intergenic 20.0%
!! TATTTCAAGAATCTACAAAA+GGG - chr5.2:7659835-7659854 MS.gene09575:CDS 20.0%
!! TCAAAAAAGTTGTCATTAAA+TGG + chr5.2:7659418-7659437 None:intergenic 20.0%
!! TCTAATTATTAGAATAGACT+TGG - chr5.2:7658363-7658382 MS.gene09575:intron 20.0%
!! TGCACAATATAAATTAGAAA+AGG + chr5.2:7657857-7657876 None:intergenic 20.0%
!! TTCACAATATATCAAAGTTA+AGG + chr5.2:7658862-7658881 None:intergenic 20.0%
!!! AATGTGAAATTTGAATTTTC+AGG - chr5.2:7658486-7658505 MS.gene09575:intron 20.0%
!!! ACACTTTTCCAATTAATTAA+AGG - chr5.2:7658700-7658719 MS.gene09575:intron 20.0%
!!! CACTTTTCCAATTAATTAAA+GGG - chr5.2:7658701-7658720 MS.gene09575:intron 20.0%
!!! TAAAGTTACTTTGTAGTATA+TGG + chr5.2:7659199-7659218 None:intergenic 20.0%
!!! TCAATTACATGCATTTTATT+TGG - chr5.2:7657811-7657830 MS.gene09575:CDS 20.0%
!!! TTGGTTTTTTCACTTTTTAT+TGG - chr5.2:7659443-7659462 MS.gene09575:intron 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG - chr5.2:7659456-7659475 MS.gene09575:intron 20.0%
! AGCTTAATCTTATACTTGTT+TGG - chr5.2:7657592-7657611 MS.gene09575:CDS 25.0%
! ATACATTGTTTAAACATCAC+GGG - chr5.2:7658620-7658639 MS.gene09575:intron 25.0%
! ATCAAAGTTAAGGACAAATT+TGG + chr5.2:7658852-7658871 None:intergenic 25.0%
! CTATTTCAAGAATCTACAAA+AGG - chr5.2:7659834-7659853 MS.gene09575:CDS 25.0%
! CTTGAAATAGACATTATCAA+AGG + chr5.2:7659824-7659843 None:intergenic 25.0%
! GTTTAAACAATGTATTAAGC+TGG + chr5.2:7658615-7658634 None:intergenic 25.0%
! TATGATATTCCAATTACACA+GGG - chr5.2:7657881-7657900 MS.gene09575:CDS 25.0%
! TCTAAAGATTCTGATGTAAA+TGG - chr5.2:7658559-7658578 MS.gene09575:intron 25.0%
! TTACTCGTTATAATAGTGTT+TGG + chr5.2:7658412-7658431 None:intergenic 25.0%
! TTATGATATTCCAATTACAC+AGG - chr5.2:7657880-7657899 MS.gene09575:CDS 25.0%
!! ATTCAGTCTTATAACTAACT+AGG - chr5.2:7658449-7658468 MS.gene09575:intron 25.0%
!! CCAGTCAAATAATTTTAAAC+AGG - chr5.2:7658726-7658745 MS.gene09575:intron 25.0%
!! CCTGTTTAAAATTATTTGAC+TGG + chr5.2:7658729-7658748 None:intergenic 25.0%
!!! CAAAGAAAGTTGATATCTTT+AGG + chr5.2:7658252-7658271 None:intergenic 25.0%
AAACCAATGCAATAACATCA+CGG + chr5.2:7658087-7658106 None:intergenic 30.0%
AAGAATCTACAAAAGGGAAA+GGG - chr5.2:7659841-7659860 MS.gene09575:CDS 30.0%
AAGACTGAATTAACTTTCAC+AGG + chr5.2:7658439-7658458 None:intergenic 30.0%
AATTAAAATCAATGTGCCCA+AGG - chr5.2:7659749-7659768 MS.gene09575:intron 30.0%
ACGACTTGACATTGTTTATA+TGG - chr5.2:7658937-7658956 MS.gene09575:intron 30.0%
AGACTGAATTAACTTTCACA+GGG + chr5.2:7658438-7658457 None:intergenic 30.0%
ATGATATTCCAATTACACAG+GGG - chr5.2:7657882-7657901 MS.gene09575:CDS 30.0%
ATTAAAATCAATGTGCCCAA+GGG - chr5.2:7659750-7659769 MS.gene09575:intron 30.0%
GTTCAAAAGTTGTCAAAAAG+TGG - chr5.2:7659536-7659555 MS.gene09575:CDS 30.0%
TAGAATTGGGAAGATTTGAT+GGG - chr5.2:7658530-7658549 MS.gene09575:intron 30.0%
TATTGGTCAAAAACAATGGA+GGG - chr5.2:7659460-7659479 MS.gene09575:intron 30.0%
TTATTGGTCAAAAACAATGG+AGG - chr5.2:7659459-7659478 MS.gene09575:intron 30.0%
! CTGACAATGTTTTCAACATT+AGG + chr5.2:7657696-7657715 None:intergenic 30.0%
!! TGAAATTTGAATTTTCAGGC+AGG - chr5.2:7658490-7658509 MS.gene09575:intron 30.0%
AACCAATGCAATAACATCAC+GGG + chr5.2:7658086-7658105 None:intergenic 35.0%
AAGCATCTGAGTTAGATCTT+AGG - chr5.2:7659222-7659241 MS.gene09575:intron 35.0%
ACAGAAATGATTGCACTTTC+AGG - chr5.2:7658652-7658671 MS.gene09575:intron 35.0%
ACCATACTATGAGGTAGAAT+TGG - chr5.2:7658516-7658535 MS.gene09575:intron 35.0%
ACCCTCAAACAGTATAATGA+GGG + chr5.2:7658799-7658818 None:intergenic 35.0%
ACCCTCATTATACTGTTTGA+GGG - chr5.2:7658795-7658814 MS.gene09575:intron 35.0%
ACTGGCACCCTTTAATTAAT+TGG + chr5.2:7658711-7658730 None:intergenic 35.0%
CAAGAATCTACAAAAGGGAA+AGG - chr5.2:7659840-7659859 MS.gene09575:CDS 35.0%
CAGCACAAGAAACTTTATTC+TGG + chr5.2:7658045-7658064 None:intergenic 35.0%
CAGCCAATGAAAGATTATCA+GGG + chr5.2:7657964-7657983 None:intergenic 35.0%
CCATACTATGAGGTAGAATT+GGG - chr5.2:7658517-7658536 MS.gene09575:intron 35.0%
CCTGAAATTGTACACTCTAT+CGG + chr5.2:7659683-7659702 None:intergenic 35.0%
CGTAGTGTAAGTCTAATGTA+GGG + chr5.2:7659723-7659742 None:intergenic 35.0%
GAAACTTTATTCTGGCAAAG+AGG + chr5.2:7658037-7658056 None:intergenic 35.0%
GAATCATGTCAATCAACACT+AGG + chr5.2:7659608-7659627 None:intergenic 35.0%
GTAGAATTGGGAAGATTTGA+TGG - chr5.2:7658529-7658548 MS.gene09575:intron 35.0%
GTAGTGGTGTCTACTTAATT+GGG + chr5.2:7657661-7657680 None:intergenic 35.0%
GTGTCAAGAATTCACACAAT+GGG - chr5.2:7659992-7660011 MS.gene09575:CDS 35.0%
TACCCTCAAACAGTATAATG+AGG + chr5.2:7658800-7658819 None:intergenic 35.0%
TAGGACAAGAATTCTTGTAG+TGG + chr5.2:7657677-7657696 None:intergenic 35.0%
TCAATATGTCTCATGCATGT+TGG + chr5.2:7658754-7658773 None:intergenic 35.0%
TCACCCTGATAATCTTTCAT+TGG - chr5.2:7657958-7657977 MS.gene09575:CDS 35.0%
TGTAGTGGTGTCTACTTAAT+TGG + chr5.2:7657662-7657681 None:intergenic 35.0%
! TAGACATTATCAAAGGCATG+TGG + chr5.2:7659817-7659836 None:intergenic 35.0%
! TTGTGCTGATATTCTAGCTA+TGG - chr5.2:7658057-7658076 MS.gene09575:intron 35.0%
!! AAAAGCATTTACTGCAGCTT+TGG + chr5.2:7659908-7659927 None:intergenic 35.0%
!! AATTTGAATTTTCAGGCAGG+AGG - chr5.2:7658493-7658512 MS.gene09575:intron 35.0%
!! GTAGTATTTCTAGTGGTTGT+CGG - chr5.2:7659291-7659310 MS.gene09575:intron 35.0%
!! TTGAAGGGTAGTATTTCTAG+TGG - chr5.2:7659284-7659303 MS.gene09575:intron 35.0%
!!! GACAACTTTTTTGACAACCT+TGG - chr5.2:7659424-7659443 MS.gene09575:intron 35.0%
AACCCGTGATGTTATTGCAT+TGG - chr5.2:7658081-7658100 MS.gene09575:intron 40.0%
AACTCTACCCAATTTGGTCA+TGG + chr5.2:7659971-7659990 None:intergenic 40.0%
ACACAATGGGAACATTCGTA+CGG - chr5.2:7660005-7660024 MS.gene09575:CDS 40.0%
ACATGATTCATTCCCTCTGT+AGG - chr5.2:7659619-7659638 MS.gene09575:CDS 40.0%
AGGGAGAAAAAAGAAGAGAG+AGG - chr5.2:7659479-7659498 MS.gene09575:intron 40.0%
ATGACCAAATTGGGTAGAGT+TGG - chr5.2:7659970-7659989 MS.gene09575:CDS 40.0%
CCAGCCAATGAAAGATTATC+AGG + chr5.2:7657965-7657984 None:intergenic 40.0%
CCCAATTCTACCTCATAGTA+TGG + chr5.2:7658520-7658539 None:intergenic 40.0%
CCGATAGAGTGTACAATTTC+AGG - chr5.2:7659680-7659699 MS.gene09575:CDS 40.0%
CCTGATAATCTTTCATTGGC+TGG - chr5.2:7657962-7657981 MS.gene09575:CDS 40.0%
CTACTTAATTGGGCATGAGT+AGG + chr5.2:7657651-7657670 None:intergenic 40.0%
GACCCTCATTATACTGTTTG+AGG - chr5.2:7658794-7658813 MS.gene09575:intron 40.0%
GCGTAGTGTAAGTCTAATGT+AGG + chr5.2:7659724-7659743 None:intergenic 40.0%
GGTGTCAAGAATTCACACAA+TGG - chr5.2:7659991-7660010 MS.gene09575:CDS 40.0%
GTTGCAATGTGAGAATCCAA+CGG + chr5.2:7659653-7659672 None:intergenic 40.0%
TTACCTGAACAAAGCAGTCA+TGG + chr5.2:7657785-7657804 None:intergenic 40.0%
! AATCTTTCATTGGCTGGAGA+TGG - chr5.2:7657968-7657987 MS.gene09575:CDS 40.0%
! ACTGTTTGAGGGTATGAATG+AGG - chr5.2:7658806-7658825 MS.gene09575:intron 40.0%
! CAAAGGCATGTGGAGTAATT+GGG + chr5.2:7659807-7659826 None:intergenic 40.0%
! CTGTTTGAGGGTATGAATGA+GGG - chr5.2:7658807-7658826 MS.gene09575:intron 40.0%
! GGATCATCTAGAACAGCATT+AGG - chr5.2:7658384-7658403 MS.gene09575:intron 40.0%
! TCAAAGGCATGTGGAGTAAT+TGG + chr5.2:7659808-7659827 None:intergenic 40.0%
AATGGAAAACTTCCTGAGCC+AGG - chr5.2:7658577-7658596 MS.gene09575:intron 45.0%
AGTGTAAACCGTAAACCACG+CGG + chr5.2:7658685-7658704 None:intergenic 45.0%
ATGGAAGAAGAGACGTAGAG+TGG + chr5.2:7657766-7657785 None:intergenic 45.0%
GACACCAACTCTACCCAATT+TGG + chr5.2:7659977-7659996 None:intergenic 45.0%
GCCACATAATAGAGCAGAGA+GGG - chr5.2:7657934-7657953 MS.gene09575:CDS 45.0%
GTTGCTGCCATGACCAAATT+GGG - chr5.2:7659961-7659980 MS.gene09575:CDS 45.0%
TAATGAGGGTCGCATAGCAT+AGG + chr5.2:7658785-7658804 None:intergenic 45.0%
TATACAAGCCAAAGCAGCTG+TGG - chr5.2:7658003-7658022 MS.gene09575:intron 45.0%
TCCATATCAACTGCAACCCT+TGG + chr5.2:7659784-7659803 None:intergenic 45.0%
TCCCTCTCTGCTCTATTATG+TGG + chr5.2:7657938-7657957 None:intergenic 45.0%
TGGATCTTGAATCCGTGAAG+AGG + chr5.2:7659888-7659907 None:intergenic 45.0%
TGTTGCTGCCATGACCAAAT+TGG - chr5.2:7659960-7659979 MS.gene09575:CDS 45.0%
TTGAATCCGTGAAGAGGACT+TGG + chr5.2:7659882-7659901 None:intergenic 45.0%
! CTTCCATGACTGCTTTGTTC+AGG - chr5.2:7657779-7657798 MS.gene09575:CDS 45.0%
! GAGGGTATGAATGAGGGTAT+TGG - chr5.2:7658813-7658832 MS.gene09575:intron 45.0%
! TCCAAGGGTTGCAGTTGATA+TGG - chr5.2:7659780-7659799 MS.gene09575:intron 45.0%
!! AGCTGGTTCAAGTTGAATCC+TGG + chr5.2:7658598-7658617 None:intergenic 45.0%
!! TTCAAGTTGAATCCTGGCTC+AGG + chr5.2:7658592-7658611 None:intergenic 45.0%
!!! ATTATTTTACATTTATAAAT+TGG + chr5.2:7659325-7659344 None:intergenic 5.0%
AACAGCATCCACAGCTGCTT+TGG + chr5.2:7658014-7658033 None:intergenic 50.0%
AAGAAGAGACGTAGAGTGGC+AGG + chr5.2:7657762-7657781 None:intergenic 50.0%
ATCAATGTGCCCAAGGGATG+TGG - chr5.2:7659756-7659775 MS.gene09575:intron 50.0%
CCATCACACCCCTGTGTAAT+TGG + chr5.2:7657893-7657912 None:intergenic 50.0%
CGCCACATAATAGAGCAGAG+AGG - chr5.2:7657933-7657952 MS.gene09575:CDS 50.0%
CTCAGACCAAGTCCTCTTCA+CGG - chr5.2:7659873-7659892 MS.gene09575:CDS 50.0%
GGTCATGGCAGCAACAAAGT+TGG + chr5.2:7659956-7659975 None:intergenic 50.0%
GGTCGCATAGCATAGGAACA+TGG + chr5.2:7658778-7658797 None:intergenic 50.0%
! CCAATTACACAGGGGTGTGA+TGG - chr5.2:7657890-7657909 MS.gene09575:CDS 50.0%
AACGGTGTGAGCACCTACAG+AGG + chr5.2:7659635-7659654 None:intergenic 55.0%
ACCCTTGGATCCACATCCCT+TGG + chr5.2:7659769-7659788 None:intergenic 55.0%
ACGGTGTGAGCACCTACAGA+GGG + chr5.2:7659634-7659653 None:intergenic 55.0%
CCCAAGGGATGTGGATCCAA+GGG - chr5.2:7659765-7659784 MS.gene09575:intron 55.0%
CCCTTGGATCCACATCCCTT+GGG + chr5.2:7659768-7659787 None:intergenic 55.0%
GGCAGGAGGACCATACTATG+AGG - chr5.2:7658507-7658526 MS.gene09575:intron 55.0%
GTAATGCGCCGCGTGGTTTA+CGG - chr5.2:7658674-7658693 MS.gene09575:intron 55.0%
TCTGTAGGTGCTCACACCGT+TGG - chr5.2:7659634-7659653 MS.gene09575:CDS 55.0%
! CGTGAAGAGGACTTGGTCTG+AGG + chr5.2:7659875-7659894 None:intergenic 55.0%
GCCCAAGGGATGTGGATCCA+AGG - chr5.2:7659764-7659783 MS.gene09575:intron 60.0%
! CTTTCAGGTAATGCGCCGCG+TGG - chr5.2:7658667-7658686 MS.gene09575:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 7657585 7660044 7657585 ID=MS.gene09575
chr5.2 mRNA 7657585 7660044 7657585 ID=MS.gene09575.t1;Parent=MS.gene09575
chr5.2 exon 7659829 7660044 7659829 ID=MS.gene09575.t1.exon1;Parent=MS.gene09575.t1
chr5.2 CDS 7659829 7660044 7659829 ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1
chr5.2 exon 7659527 7659727 7659527 ID=MS.gene09575.t1.exon2;Parent=MS.gene09575.t1
chr5.2 CDS 7659527 7659727 7659527 ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1
chr5.2 exon 7658956 7659121 7658956 ID=MS.gene09575.t1.exon3;Parent=MS.gene09575.t1
chr5.2 CDS 7658956 7659121 7658956 ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1
chr5.2 exon 7657585 7657988 7657585 ID=MS.gene09575.t1.exon4;Parent=MS.gene09575.t1
chr5.2 CDS 7657585 7657988 7657585 ID=cds.MS.gene09575.t1;Parent=MS.gene09575.t1
Gene Sequence

>MS.gene09575

ATGGCTCAGCTTAATCTTATACTTGTTTGGTTACTCTTCTTAACTCTCTTTCTTCATTCATGTCCTACTCATGCCCAATTAAGTAGACACCACTACAAGAATTCTTGTCCTAATGTTGAAAACATTGTCAGACAAGCTGTCAAAAAGAAATTTCATCAAACATTTACAACAGTTCCTGCCACTCTACGTCTCTTCTTCCATGACTGCTTTGTTCAGGTAATTAATTTCAATTACATGCATTTTATTTGGTTCACCATAAATAAATGTTACCTTTTCTAATTTATATTGTGCATGTTTATGATATTCCAATTACACAGGGGTGTGATGGTTCTATTCTTGTAGCATCAACGCCACATAATAGAGCAGAGAGGGATCACCCTGATAATCTTTCATTGGCTGGAGATGGATTTGATACTGTTATACAAGCCAAAGCAGCTGTGGATGCTGTTCCTCTTTGCCAGAATAAAGTTTCTTGTGCTGATATTCTAGCTATGGCAACCCGTGATGTTATTGCATTGGTTTGTTTGTTTCTCAATTGATTCTAGAATTAATTAATCAATTTTTTCTCTAAACTAATTTTGTTCTATAGTATATAAAATTCGTCAATTTAATCTCTACTATTAAGATATATGATGTTATAGACTACCGTGACTATTTTAATTATCCTAAAGATATCAACTTTCTTTGAACAAATATTTCTTATTATTTTTATATACTTTAGAAATTAAATTTAAGAGACATTGAAAGTTTAAAAATTAGATTGATGGTTTATCTTTATTCTAATTATTAGAATAGACTTGGATCATCTAGAACAGCATTAGGATCCAAACACTATTATAACGAGTAATGACCCTGTGAAAGTTAATTCAGTCTTATAACTAACTAGGAGTTGAATTGAATTAATGTGAAATTTGAATTTTCAGGCAGGAGGACCATACTATGAGGTAGAATTGGGAAGATTTGATGGGCTAAGATCTAAAGATTCTGATGTAAATGGAAAACTTCCTGAGCCAGGATTCAACTTGAACCAGCTTAATACATTGTTTAAACATCACGGGCTTACACAAACAGAAATGATTGCACTTTCAGGTAATGCGCCGCGTGGTTTACGGTTTACACTTTTCCAATTAATTAAAGGGTGCCAGTCAAATAATTTTAAACAGGTGCCAACATGCATGAGACATATTGATCCATGTTCCTATGCTATGCGACCCTCATTATACTGTTTGAGGGTATGAATGAGGGTATTGGATAAAGTAAAATACCAAATTTGTCCTTAACTTTGATATATTGTGAACATTAAAAAAATTCAGAAAGTGCACTGTATGAGACTTCGTTAATGATAGCATTTAACGACTTGACATTGTTTATATGGATCGTAAACAATGAATTTGAGAAGAATAAATTTATATTTGATCAATGAAAATGAAAACAAGTTTGTGACAAGAGTTTTTAGTTCACTATTACTGATTCAAATCAACATATCATATTATAATTCTACGTCATTAATGAGTATGTCACTTTATTAAGAATAATGAATAAGTCAGAAACTAAATCATATAGAAAAAAAATGATATACTAAAAGTGCACTATATGAACTCAATTATTAATCCATATACTACAAAGTAACTTTACTCAAGCATCTGAGTTAGATCTTAGGAGTCTTTTTCAACTTAATCAATGTAGAAAAATAAAGATATTGAAGGGTAGTATTTCTAGTGGTTGTCGGCAACATATCCAATTTATAAATGTAAAATAATATAAAGTAATCATTCTTAAAAAGTTGGAAAAGATCATCGAATAAAAATAAGTGTAATGATATTTTGACATCCATTTAATGACAACTTTTTTGACAACCTTGGTTTTTTCACTTTTTATTGGTCAAAAACAATGGAGGGAGAAAAAAGAAGAGAGAGGATAACAACATCATGTGAGTATGAGAGAGAAAGTTGTTCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCTAAAAATAATAGATAAAACTTTGGATCCTAGTGTTGATTGACATGATTCATTCCCTCTGTAGGTGCTCACACCGTTGGATTCTCACATTGCAACAAATTCACCGATAGAGTGTACAATTTCAGGACAACAAGTCGAGTAGACCCTACATTAGACTTACACTACGCAGCAAAATTAAAATCAATGTGCCCAAGGGATGTGGATCCAAGGGTTGCAGTTGATATGGACCCAATTACTCCACATGCCTTTGATAATGTCTATTTCAAGAATCTACAAAAGGGAAAGGGTTTATTCACCTCAGACCAAGTCCTCTTCACGGATTCAAGATCCAAAGCTGCAGTAAATGCTTTTGCTAGTAGTAACAAAATATTTCGTGCCAACTTTGTTGCTGCCATGACCAAATTGGGTAGAGTTGGTGTCAAGAATTCACACAATGGGAACATTCGTACGGATTGTTCTGTGATTTAA

Protein sequence

>MS.gene09575.t1

MAQLNLILVWLLFLTLFLHSCPTHAQLSRHHYKNSCPNVENIVRQAVKKKFHQTFTTVPATLRLFFHDCFVQGCDGSILVASTPHNRAERDHPDNLSLAGDGFDTVIQAKAAVDAVPLCQNKVSCADILAMATRDVIALAGGPYYEVELGRFDGLRSKDSDVNGKLPEPGFNLNQLNTLFKHHGLTQTEMIALSGAHTVGFSHCNKFTDRVYNFRTTSRVDPTLDLHYAAKLKSMCPRDVDPRVAVDMDPITPHAFDNVYFKNLQKGKGLFTSDQVLFTDSRSKAAVNAFASSNKIFRANFVAAMTKLGRVGVKNSHNGNIRTDCSVI