Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44482.t1 | CAA62228.1 | 100 | 323 | 0 | 0 | 1 | 323 | 1 | 323 | 8.60E-183 | 649.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44482.t1 | Q43873 | 67.4 | 325 | 101 | 1 | 1 | 320 | 1 | 325 | 2.0e-124 | 446.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44482.t1 | O24080 | 100.0 | 323 | 0 | 0 | 1 | 323 | 1 | 323 | 6.2e-183 | 649.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene80170 | MS.gene44482 | PPI |
MS.gene09575 | MS.gene44482 | PPI |
MS.gene029047 | MS.gene44482 | PPI |
MS.gene014924 | MS.gene44482 | PPI |
MS.gene44482 | MS.gene040455 | PPI |
MS.gene060053 | MS.gene44482 | PPI |
MS.gene067613 | MS.gene44482 | PPI |
MS.gene32635 | MS.gene44482 | PPI |
MS.gene44482 | MS.gene072888 | PPI |
MS.gene014836 | MS.gene44482 | PPI |
MS.gene48740 | MS.gene44482 | PPI |
MS.gene53782 | MS.gene44482 | PPI |
MS.gene20276 | MS.gene44482 | PPI |
MS.gene48733 | MS.gene44482 | PPI |
MS.gene67066 | MS.gene44482 | PPI |
MS.gene88144 | MS.gene44482 | PPI |
MS.gene35931 | MS.gene44482 | PPI |
MS.gene44482 | MS.gene48746 | PPI |
MS.gene44482 | MS.gene88044 | PPI |
MS.gene44482 | MS.gene45786 | PPI |
MS.gene32715 | MS.gene44482 | PPI |
MS.gene043054 | MS.gene44482 | PPI |
MS.gene043043 | MS.gene44482 | PPI |
MS.gene44482 | MS.gene35853 | PPI |
MS.gene44482 | MS.gene071284 | PPI |
MS.gene44482 | MS.gene015231 | PPI |
MS.gene57204 | MS.gene44482 | PPI |
MS.gene35795 | MS.gene44482 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44482.t1 | MTR_4g095450 | 99.071 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 0.0 | 661 |
MS.gene44482.t1 | MTR_5g016010 | 70.427 | 328 | 92 | 1 | 1 | 323 | 1 | 328 | 5.91e-178 | 495 |
MS.gene44482.t1 | MTR_4g127670 | 68.771 | 301 | 86 | 2 | 26 | 321 | 23 | 320 | 5.55e-152 | 429 |
MS.gene44482.t1 | MTR_1g009750 | 61.585 | 328 | 120 | 2 | 1 | 323 | 1 | 327 | 7.18e-145 | 411 |
MS.gene44482.t1 | MTR_7g029030 | 60.194 | 309 | 115 | 4 | 18 | 321 | 12 | 317 | 8.90e-131 | 375 |
MS.gene44482.t1 | MTR_1g009750 | 56.707 | 328 | 119 | 3 | 1 | 323 | 1 | 310 | 7.73e-129 | 370 |
MS.gene44482.t1 | MTR_8g062780 | 44.025 | 318 | 168 | 5 | 9 | 320 | 7 | 320 | 2.10e-85 | 260 |
MS.gene44482.t1 | MTR_3g092990 | 42.767 | 318 | 173 | 5 | 12 | 323 | 11 | 325 | 1.29e-81 | 251 |
MS.gene44482.t1 | MTR_4g087965 | 42.857 | 308 | 161 | 6 | 26 | 322 | 41 | 344 | 3.77e-80 | 247 |
MS.gene44482.t1 | MTR_1g025980 | 42.453 | 318 | 165 | 8 | 14 | 323 | 10 | 317 | 1.24e-79 | 245 |
MS.gene44482.t1 | MTR_8g075100 | 45.574 | 305 | 146 | 8 | 27 | 323 | 26 | 318 | 7.26e-79 | 243 |
MS.gene44482.t1 | MTR_5g022870 | 42.724 | 323 | 165 | 8 | 6 | 320 | 2 | 312 | 1.72e-78 | 242 |
MS.gene44482.t1 | MTR_0286s0010 | 43.189 | 301 | 164 | 4 | 25 | 320 | 32 | 330 | 2.17e-78 | 243 |
MS.gene44482.t1 | MTR_6g008075 | 43.189 | 301 | 164 | 4 | 25 | 320 | 32 | 330 | 2.17e-78 | 243 |
MS.gene44482.t1 | MTR_2g029750 | 46.474 | 312 | 151 | 8 | 19 | 320 | 21 | 326 | 6.93e-78 | 242 |
MS.gene44482.t1 | MTR_1g090760 | 39.939 | 328 | 187 | 5 | 1 | 320 | 1 | 326 | 5.07e-77 | 239 |
MS.gene44482.t1 | MTR_2g029815 | 43.558 | 326 | 163 | 7 | 11 | 320 | 6 | 326 | 8.66e-77 | 239 |
MS.gene44482.t1 | MTR_2g029820 | 43.865 | 326 | 162 | 7 | 11 | 320 | 6 | 326 | 5.75e-76 | 237 |
MS.gene44482.t1 | MTR_7g107520 | 43.119 | 327 | 171 | 8 | 3 | 323 | 2 | 319 | 2.12e-75 | 234 |
MS.gene44482.t1 | MTR_2g029860 | 43.269 | 312 | 166 | 5 | 19 | 323 | 22 | 329 | 3.99e-74 | 232 |
MS.gene44482.t1 | MTR_1g101830 | 42.951 | 305 | 160 | 7 | 25 | 323 | 25 | 321 | 7.09e-74 | 231 |
MS.gene44482.t1 | MTR_2g028980 | 43.533 | 317 | 167 | 6 | 12 | 320 | 14 | 326 | 1.02e-73 | 231 |
MS.gene44482.t1 | MTR_7g086820 | 40.924 | 303 | 168 | 5 | 24 | 323 | 17 | 311 | 1.70e-73 | 229 |
MS.gene44482.t1 | MTR_2g029830 | 44.516 | 310 | 158 | 6 | 20 | 320 | 21 | 325 | 2.28e-73 | 230 |
MS.gene44482.t1 | MTR_2g029800 | 42.718 | 309 | 167 | 5 | 19 | 320 | 21 | 326 | 6.75e-73 | 229 |
MS.gene44482.t1 | MTR_7g093370 | 41.745 | 321 | 172 | 7 | 9 | 320 | 53 | 367 | 1.86e-72 | 229 |
MS.gene44482.t1 | MTR_1g054205 | 42.284 | 324 | 169 | 7 | 6 | 320 | 8 | 322 | 3.53e-72 | 226 |
MS.gene44482.t1 | MTR_2g029740 | 43.810 | 315 | 161 | 8 | 19 | 323 | 21 | 329 | 4.57e-72 | 227 |
MS.gene44482.t1 | MTR_4g046713 | 40.566 | 318 | 177 | 4 | 14 | 323 | 12 | 325 | 1.34e-71 | 225 |
MS.gene44482.t1 | MTR_3g092990 | 41.509 | 318 | 166 | 7 | 12 | 323 | 11 | 314 | 1.41e-71 | 224 |
MS.gene44482.t1 | MTR_3g094650 | 40.810 | 321 | 172 | 6 | 7 | 320 | 9 | 318 | 3.18e-71 | 224 |
MS.gene44482.t1 | MTR_2g084090 | 41.558 | 308 | 172 | 5 | 18 | 323 | 16 | 317 | 3.59e-71 | 223 |
MS.gene44482.t1 | MTR_2g084080 | 40.523 | 306 | 177 | 3 | 18 | 323 | 16 | 316 | 1.22e-70 | 222 |
MS.gene44482.t1 | MTR_2g084000 | 40.764 | 314 | 180 | 4 | 11 | 323 | 10 | 318 | 1.81e-70 | 222 |
MS.gene44482.t1 | MTR_2g088770 | 39.748 | 317 | 179 | 6 | 14 | 323 | 13 | 324 | 2.08e-70 | 222 |
MS.gene44482.t1 | MTR_4g125940 | 39.634 | 328 | 178 | 7 | 10 | 323 | 7 | 328 | 5.04e-70 | 221 |
MS.gene44482.t1 | MTR_1g077000 | 39.796 | 294 | 168 | 5 | 27 | 320 | 39 | 323 | 8.45e-70 | 220 |
MS.gene44482.t1 | MTR_7g072510 | 39.423 | 312 | 183 | 4 | 12 | 323 | 6 | 311 | 1.33e-69 | 219 |
MS.gene44482.t1 | MTR_4g114210 | 40.717 | 307 | 164 | 6 | 25 | 321 | 19 | 317 | 3.12e-69 | 219 |
MS.gene44482.t1 | MTR_6g043240 | 41.751 | 297 | 165 | 5 | 27 | 323 | 42 | 330 | 3.39e-69 | 219 |
MS.gene44482.t1 | MTR_2g084110 | 40.196 | 306 | 178 | 3 | 18 | 323 | 16 | 316 | 4.69e-69 | 218 |
MS.gene44482.t1 | MTR_2g008710 | 39.755 | 327 | 175 | 7 | 6 | 323 | 11 | 324 | 6.54e-69 | 218 |
MS.gene44482.t1 | MTR_2g029850 | 40.606 | 330 | 182 | 6 | 1 | 320 | 1 | 326 | 1.29e-68 | 218 |
MS.gene44482.t1 | MTR_2g029910 | 44.516 | 310 | 159 | 7 | 20 | 320 | 23 | 328 | 2.37e-68 | 217 |
MS.gene44482.t1 | MTR_2g084010 | 40.453 | 309 | 178 | 4 | 16 | 323 | 14 | 317 | 4.92e-68 | 215 |
MS.gene44482.t1 | MTR_4g029170 | 38.199 | 322 | 192 | 5 | 1 | 320 | 1 | 317 | 6.52e-68 | 215 |
MS.gene44482.t1 | MTR_2g040000 | 38.835 | 309 | 172 | 6 | 26 | 323 | 28 | 330 | 1.57e-67 | 214 |
MS.gene44482.t1 | MTR_7g072480 | 40.968 | 310 | 167 | 6 | 16 | 320 | 14 | 312 | 1.64e-67 | 214 |
MS.gene44482.t1 | MTR_3g105790 | 39.241 | 316 | 177 | 6 | 12 | 320 | 11 | 318 | 6.29e-67 | 213 |
MS.gene44482.t1 | MTR_2g029730 | 39.939 | 328 | 183 | 6 | 1 | 320 | 1 | 322 | 3.58e-66 | 211 |
MS.gene44482.t1 | MTR_5g021060 | 42.333 | 300 | 164 | 5 | 27 | 320 | 30 | 326 | 4.00e-66 | 211 |
MS.gene44482.t1 | MTR_2g084020 | 40.065 | 307 | 178 | 4 | 18 | 323 | 16 | 317 | 4.37e-66 | 210 |
MS.gene44482.t1 | MTR_1g086320 | 37.685 | 337 | 191 | 8 | 1 | 323 | 1 | 332 | 5.91e-66 | 211 |
MS.gene44482.t1 | MTR_6g043280 | 36.585 | 328 | 194 | 6 | 4 | 323 | 10 | 331 | 7.15e-66 | 210 |
MS.gene44482.t1 | MTR_1g038680 | 41.447 | 304 | 160 | 9 | 32 | 323 | 34 | 331 | 1.13e-65 | 210 |
MS.gene44482.t1 | MTR_7g086870 | 39.604 | 303 | 167 | 7 | 25 | 323 | 20 | 310 | 1.44e-65 | 209 |
MS.gene44482.t1 | MTR_2g029560 | 38.554 | 332 | 187 | 6 | 1 | 323 | 1 | 324 | 3.72e-65 | 209 |
MS.gene44482.t1 | MTR_8g076820 | 39.490 | 314 | 181 | 4 | 16 | 323 | 19 | 329 | 5.34e-65 | 208 |
MS.gene44482.t1 | MTR_4g083710 | 38.125 | 320 | 190 | 5 | 8 | 323 | 8 | 323 | 7.28e-65 | 207 |
MS.gene44482.t1 | MTR_3g072190 | 40.000 | 295 | 172 | 3 | 26 | 320 | 25 | 314 | 1.86e-64 | 206 |
MS.gene44482.t1 | MTR_4g122640 | 38.079 | 302 | 180 | 4 | 23 | 320 | 34 | 332 | 3.17e-64 | 206 |
MS.gene44482.t1 | MTR_5g074970 | 40.752 | 319 | 174 | 9 | 9 | 320 | 12 | 322 | 3.48e-64 | 206 |
MS.gene44482.t1 | MTR_1g086490 | 37.500 | 336 | 182 | 8 | 6 | 323 | 14 | 339 | 5.52e-64 | 206 |
MS.gene44482.t1 | MTR_4g029200 | 39.159 | 309 | 181 | 4 | 14 | 321 | 33 | 335 | 1.31e-63 | 205 |
MS.gene44482.t1 | MTR_6g043460 | 39.116 | 294 | 174 | 4 | 27 | 320 | 36 | 324 | 1.32e-63 | 205 |
MS.gene44482.t1 | MTR_0155s0040 | 36.364 | 319 | 187 | 7 | 5 | 320 | 6 | 311 | 2.78e-63 | 203 |
MS.gene44482.t1 | MTR_3g466200 | 38.679 | 318 | 182 | 8 | 11 | 323 | 10 | 319 | 6.24e-63 | 202 |
MS.gene44482.t1 | MTR_4g029180 | 39.590 | 293 | 170 | 5 | 30 | 320 | 30 | 317 | 3.29e-62 | 201 |
MS.gene44482.t1 | MTR_5g017860 | 37.695 | 321 | 186 | 7 | 12 | 323 | 10 | 325 | 4.18e-62 | 200 |
MS.gene44482.t1 | MTR_5g083860 | 37.152 | 323 | 184 | 7 | 5 | 320 | 11 | 321 | 6.88e-62 | 200 |
MS.gene44482.t1 | MTR_3g094670 | 39.024 | 328 | 182 | 6 | 1 | 320 | 1 | 318 | 1.36e-61 | 199 |
MS.gene44482.t1 | MTR_4g133800 | 38.462 | 299 | 167 | 6 | 28 | 320 | 42 | 329 | 3.23e-61 | 198 |
MS.gene44482.t1 | MTR_4g125940 | 42.647 | 272 | 140 | 6 | 62 | 323 | 8 | 273 | 4.16e-61 | 196 |
MS.gene44482.t1 | MTR_5g074860 | 39.077 | 325 | 176 | 11 | 6 | 320 | 9 | 321 | 5.30e-61 | 197 |
MS.gene44482.t1 | MTR_1g115900 | 39.571 | 326 | 182 | 8 | 1 | 320 | 1 | 317 | 1.09e-60 | 197 |
MS.gene44482.t1 | MTR_6g027440 | 37.658 | 316 | 186 | 6 | 8 | 320 | 3 | 310 | 1.40e-60 | 196 |
MS.gene44482.t1 | MTR_2g008160 | 37.621 | 311 | 172 | 7 | 25 | 323 | 22 | 322 | 1.65e-60 | 196 |
MS.gene44482.t1 | MTR_4g074995 | 38.050 | 318 | 174 | 7 | 11 | 323 | 8 | 307 | 2.48e-60 | 195 |
MS.gene44482.t1 | MTR_5g017850 | 37.380 | 313 | 184 | 6 | 16 | 320 | 14 | 322 | 3.61e-60 | 196 |
MS.gene44482.t1 | MTR_4g031140 | 34.641 | 306 | 189 | 5 | 23 | 323 | 24 | 323 | 5.52e-59 | 193 |
MS.gene44482.t1 | MTR_3g094630 | 38.629 | 321 | 179 | 6 | 7 | 320 | 9 | 318 | 1.31e-58 | 191 |
MS.gene44482.t1 | MTR_2g029830 | 45.349 | 258 | 127 | 6 | 72 | 320 | 5 | 257 | 4.25e-58 | 189 |
MS.gene44482.t1 | MTR_5g074760 | 37.654 | 324 | 186 | 8 | 3 | 320 | 4 | 317 | 6.13e-58 | 189 |
MS.gene44482.t1 | MTR_3g467600 | 39.867 | 301 | 171 | 6 | 25 | 320 | 25 | 320 | 7.80e-58 | 189 |
MS.gene44482.t1 | MTR_4g030890 | 35.197 | 304 | 186 | 5 | 25 | 323 | 98 | 395 | 7.82e-58 | 192 |
MS.gene44482.t1 | MTR_4g029190 | 38.387 | 310 | 176 | 8 | 18 | 321 | 37 | 337 | 2.50e-57 | 189 |
MS.gene44482.t1 | MTR_5g074710 | 37.812 | 320 | 186 | 7 | 7 | 320 | 5 | 317 | 4.00e-57 | 187 |
MS.gene44482.t1 | MTR_2g437770 | 35.333 | 300 | 176 | 7 | 27 | 320 | 50 | 337 | 2.87e-56 | 186 |
MS.gene44482.t1 | MTR_5g074740 | 37.460 | 315 | 184 | 7 | 12 | 320 | 10 | 317 | 6.42e-56 | 184 |
MS.gene44482.t1 | MTR_1g022970 | 37.209 | 301 | 179 | 4 | 27 | 320 | 46 | 343 | 1.78e-55 | 184 |
MS.gene44482.t1 | MTR_5g014100 | 37.908 | 306 | 174 | 7 | 27 | 320 | 26 | 327 | 1.25e-54 | 181 |
MS.gene44482.t1 | MTR_7g026990 | 36.050 | 319 | 192 | 7 | 6 | 320 | 8 | 318 | 1.48e-54 | 181 |
MS.gene44482.t1 | MTR_4g074990 | 35.938 | 320 | 181 | 7 | 8 | 323 | 5 | 304 | 2.43e-54 | 180 |
MS.gene44482.t1 | MTR_3g466180 | 36.808 | 307 | 189 | 3 | 14 | 320 | 18 | 319 | 1.28e-53 | 178 |
MS.gene44482.t1 | MTR_3g072190 | 39.841 | 251 | 146 | 3 | 70 | 320 | 2 | 247 | 2.09e-52 | 173 |
MS.gene44482.t1 | MTR_4g132490 | 34.395 | 314 | 175 | 6 | 26 | 323 | 28 | 326 | 2.13e-52 | 175 |
MS.gene44482.t1 | MTR_3g105790 | 40.984 | 244 | 132 | 4 | 84 | 320 | 4 | 242 | 6.32e-52 | 172 |
MS.gene44482.t1 | MTR_1g066710 | 35.117 | 299 | 187 | 4 | 25 | 320 | 25 | 319 | 2.25e-51 | 172 |
MS.gene44482.t1 | MTR_2g008160 | 34.853 | 307 | 151 | 7 | 25 | 323 | 22 | 287 | 5.22e-50 | 168 |
MS.gene44482.t1 | MTR_5g049280 | 33.119 | 311 | 193 | 7 | 21 | 320 | 27 | 333 | 9.79e-50 | 169 |
MS.gene44482.t1 | MTR_1g066380 | 34.333 | 300 | 190 | 4 | 24 | 320 | 24 | 319 | 2.61e-49 | 167 |
MS.gene44482.t1 | MTR_2g008730 | 35.216 | 301 | 154 | 6 | 32 | 323 | 32 | 300 | 4.35e-49 | 166 |
MS.gene44482.t1 | MTR_1g066640 | 34.783 | 299 | 188 | 4 | 25 | 320 | 25 | 319 | 4.69e-49 | 167 |
MS.gene44482.t1 | MTR_4g132110 | 32.432 | 296 | 193 | 4 | 30 | 322 | 35 | 326 | 6.78e-49 | 166 |
MS.gene44482.t1 | MTR_2g099175 | 34.426 | 305 | 182 | 7 | 26 | 320 | 35 | 331 | 8.97e-49 | 166 |
MS.gene44482.t1 | MTR_2g067440 | 32.229 | 332 | 185 | 6 | 25 | 321 | 58 | 384 | 3.36e-48 | 166 |
MS.gene44482.t1 | MTR_4g074980 | 34.268 | 321 | 174 | 9 | 8 | 323 | 5 | 293 | 8.41e-48 | 162 |
MS.gene44482.t1 | MTR_4g132110 | 31.894 | 301 | 193 | 6 | 30 | 322 | 35 | 331 | 2.84e-47 | 162 |
MS.gene44482.t1 | MTR_2g077990 | 32.440 | 336 | 186 | 7 | 25 | 323 | 74 | 405 | 4.79e-46 | 161 |
MS.gene44482.t1 | MTR_4g074980 | 37.008 | 254 | 150 | 6 | 8 | 256 | 5 | 253 | 1.58e-45 | 155 |
MS.gene44482.t1 | MTR_2g078610 | 31.845 | 336 | 188 | 7 | 25 | 323 | 74 | 405 | 2.31e-45 | 159 |
MS.gene44482.t1 | MTR_1g066680 | 33.333 | 300 | 190 | 5 | 25 | 320 | 25 | 318 | 5.28e-44 | 153 |
MS.gene44482.t1 | MTR_5g033470 | 33.651 | 315 | 190 | 10 | 20 | 320 | 64 | 373 | 3.16e-43 | 153 |
MS.gene44482.t1 | MTR_2g078280 | 32.817 | 323 | 176 | 7 | 25 | 310 | 74 | 392 | 5.05e-43 | 152 |
MS.gene44482.t1 | MTR_0147s0010 | 31.875 | 320 | 176 | 7 | 27 | 321 | 77 | 379 | 3.11e-41 | 147 |
MS.gene44482.t1 | MTR_5g074860 | 33.022 | 321 | 162 | 9 | 6 | 320 | 9 | 282 | 2.99e-40 | 142 |
MS.gene44482.t1 | MTR_1g066380 | 35.178 | 253 | 157 | 4 | 71 | 320 | 3 | 251 | 5.57e-38 | 136 |
MS.gene44482.t1 | MTR_2g008160 | 40.816 | 196 | 98 | 6 | 25 | 217 | 22 | 202 | 3.91e-37 | 132 |
MS.gene44482.t1 | MTR_2g067450 | 32.581 | 310 | 185 | 9 | 25 | 321 | 9 | 307 | 2.59e-36 | 133 |
MS.gene44482.t1 | MTR_3g072210 | 41.848 | 184 | 99 | 4 | 141 | 320 | 55 | 234 | 7.98e-35 | 127 |
MS.gene44482.t1 | MTR_5g074700 | 36.486 | 222 | 119 | 7 | 103 | 320 | 7 | 210 | 7.30e-33 | 121 |
MS.gene44482.t1 | MTR_2g029880 | 40.741 | 189 | 93 | 5 | 140 | 320 | 7 | 184 | 1.53e-32 | 120 |
MS.gene44482.t1 | MTR_7g086790 | 39.247 | 186 | 93 | 7 | 74 | 259 | 17 | 182 | 7.97e-29 | 110 |
MS.gene44482.t1 | MTR_7g072490 | 33.621 | 232 | 95 | 6 | 73 | 304 | 2 | 174 | 1.35e-27 | 107 |
MS.gene44482.t1 | MTR_5g058120 | 36.129 | 155 | 93 | 2 | 166 | 320 | 7 | 155 | 4.59e-22 | 93.6 |
MS.gene44482.t1 | MTR_4g031040 | 34.028 | 144 | 81 | 3 | 121 | 262 | 4 | 135 | 4.76e-21 | 87.8 |
MS.gene44482.t1 | MTR_3g107060 | 27.389 | 314 | 164 | 10 | 7 | 309 | 56 | 316 | 8.42e-21 | 91.3 |
MS.gene44482.t1 | MTR_2g078560 | 26.697 | 221 | 126 | 4 | 139 | 323 | 99 | 319 | 3.33e-18 | 84.0 |
MS.gene44482.t1 | MTR_1g098320 | 46.053 | 76 | 41 | 0 | 247 | 322 | 47 | 122 | 5.33e-18 | 79.7 |
MS.gene44482.t1 | MTR_3g072260 | 39.286 | 112 | 65 | 2 | 26 | 137 | 25 | 133 | 1.71e-16 | 75.5 |
MS.gene44482.t1 | MTR_5g022510 | 27.757 | 263 | 141 | 7 | 53 | 307 | 22 | 243 | 2.12e-16 | 78.6 |
MS.gene44482.t1 | MTR_5g022510 | 29.474 | 190 | 96 | 3 | 122 | 307 | 63 | 218 | 1.30e-14 | 72.8 |
MS.gene44482.t1 | MTR_4g073410 | 26.667 | 270 | 153 | 8 | 58 | 323 | 32 | 260 | 1.45e-14 | 73.2 |
MS.gene44482.t1 | MTR_7g107500 | 44.444 | 81 | 44 | 1 | 243 | 323 | 17 | 96 | 7.51e-14 | 67.0 |
MS.gene44482.t1 | MTR_6g048160 | 51.351 | 74 | 29 | 3 | 66 | 139 | 22 | 88 | 2.59e-13 | 65.1 |
MS.gene44482.t1 | MTR_4g114220 | 45.679 | 81 | 31 | 3 | 59 | 139 | 35 | 102 | 2.75e-13 | 66.6 |
MS.gene44482.t1 | MTR_4g012865 | 45.161 | 62 | 34 | 0 | 32 | 93 | 82 | 143 | 6.39e-13 | 65.9 |
MS.gene44482.t1 | MTR_1g089005 | 38.636 | 132 | 62 | 7 | 16 | 135 | 1 | 125 | 6.83e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44482.t1 | AT5G67400 | 67.385 | 325 | 101 | 1 | 1 | 320 | 1 | 325 | 2.22e-164 | 461 |
MS.gene44482.t1 | AT3G49960 | 66.769 | 325 | 103 | 1 | 1 | 320 | 1 | 325 | 6.52e-162 | 455 |
MS.gene44482.t1 | AT4G37520 | 70.764 | 301 | 83 | 1 | 25 | 320 | 25 | 325 | 1.15e-159 | 449 |
MS.gene44482.t1 | AT4G37530 | 69.767 | 301 | 86 | 1 | 25 | 320 | 25 | 325 | 4.06e-159 | 447 |
MS.gene44482.t1 | AT4G37520 | 70.100 | 301 | 82 | 2 | 25 | 320 | 25 | 322 | 1.03e-155 | 439 |
MS.gene44482.t1 | AT2G18980 | 66.349 | 315 | 97 | 2 | 12 | 321 | 10 | 320 | 7.98e-152 | 429 |
MS.gene44482.t1 | AT4G30170 | 66.887 | 302 | 91 | 2 | 25 | 321 | 25 | 322 | 3.86e-150 | 425 |
MS.gene44482.t1 | AT4G37530 | 72.093 | 258 | 67 | 1 | 25 | 277 | 25 | 282 | 3.55e-140 | 398 |
MS.gene44482.t1 | AT5G14130 | 54.969 | 322 | 136 | 4 | 7 | 323 | 12 | 329 | 2.57e-120 | 349 |
MS.gene44482.t1 | AT5G14130 | 54.969 | 322 | 136 | 4 | 7 | 323 | 53 | 370 | 4.18e-120 | 350 |
MS.gene44482.t1 | AT4G17690 | 47.458 | 295 | 152 | 2 | 27 | 320 | 26 | 318 | 4.68e-93 | 280 |
MS.gene44482.t1 | AT5G47000 | 44.304 | 316 | 171 | 4 | 7 | 320 | 14 | 326 | 7.92e-88 | 267 |
MS.gene44482.t1 | AT5G40150 | 43.791 | 306 | 169 | 2 | 19 | 323 | 24 | 327 | 2.50e-83 | 255 |
MS.gene44482.t1 | AT3G28200 | 43.046 | 302 | 164 | 4 | 25 | 323 | 19 | 315 | 2.03e-81 | 249 |
MS.gene44482.t1 | AT2G34060 | 41.558 | 308 | 167 | 6 | 26 | 323 | 41 | 345 | 3.61e-81 | 250 |
MS.gene44482.t1 | AT5G42180 | 44.000 | 300 | 153 | 7 | 27 | 320 | 23 | 313 | 2.34e-79 | 244 |
MS.gene44482.t1 | AT1G71695 | 41.284 | 327 | 178 | 4 | 6 | 321 | 13 | 336 | 3.02e-78 | 243 |
MS.gene44482.t1 | AT5G06730 | 42.284 | 324 | 175 | 5 | 8 | 323 | 14 | 333 | 5.84e-77 | 239 |
MS.gene44482.t1 | AT1G24110 | 40.635 | 315 | 175 | 4 | 16 | 320 | 6 | 318 | 2.89e-76 | 237 |
MS.gene44482.t1 | AT5G51890 | 40.125 | 319 | 176 | 8 | 8 | 319 | 7 | 317 | 6.04e-75 | 233 |
MS.gene44482.t1 | AT1G05260 | 41.231 | 325 | 177 | 7 | 6 | 322 | 5 | 323 | 9.42e-75 | 233 |
MS.gene44482.t1 | AT2G18140 | 40.483 | 331 | 183 | 6 | 1 | 320 | 4 | 331 | 2.50e-74 | 232 |
MS.gene44482.t1 | AT5G06720 | 41.304 | 322 | 177 | 5 | 7 | 320 | 12 | 329 | 4.61e-74 | 231 |
MS.gene44482.t1 | AT4G36430 | 41.479 | 311 | 173 | 4 | 16 | 320 | 19 | 326 | 1.05e-72 | 228 |
MS.gene44482.t1 | AT2G18150 | 39.759 | 332 | 185 | 5 | 1 | 320 | 4 | 332 | 1.10e-70 | 223 |
MS.gene44482.t1 | AT3G21770 | 41.830 | 306 | 164 | 8 | 25 | 322 | 27 | 326 | 1.60e-70 | 222 |
MS.gene44482.t1 | AT3G32980 | 39.759 | 332 | 185 | 8 | 4 | 323 | 5 | 333 | 7.86e-70 | 221 |
MS.gene44482.t1 | AT5G19880 | 39.264 | 326 | 180 | 6 | 10 | 320 | 3 | 325 | 2.45e-69 | 219 |
MS.gene44482.t1 | AT3G50990 | 40.432 | 324 | 181 | 5 | 6 | 320 | 17 | 337 | 4.35e-69 | 219 |
MS.gene44482.t1 | AT1G05240 | 40.066 | 302 | 167 | 6 | 27 | 320 | 26 | 321 | 1.27e-68 | 217 |
MS.gene44482.t1 | AT1G05250 | 40.066 | 302 | 167 | 6 | 27 | 320 | 26 | 321 | 1.27e-68 | 217 |
MS.gene44482.t1 | AT4G11290 | 40.491 | 326 | 178 | 9 | 10 | 323 | 4 | 325 | 7.90e-68 | 215 |
MS.gene44482.t1 | AT3G03670 | 37.152 | 323 | 186 | 6 | 7 | 320 | 3 | 317 | 1.13e-67 | 214 |
MS.gene44482.t1 | AT5G66390 | 40.184 | 326 | 180 | 5 | 7 | 320 | 7 | 329 | 1.85e-67 | 214 |
MS.gene44482.t1 | AT4G31760 | 39.286 | 308 | 171 | 6 | 22 | 321 | 24 | 323 | 2.22e-67 | 214 |
MS.gene44482.t1 | AT3G49110 | 39.877 | 326 | 181 | 8 | 10 | 323 | 13 | 335 | 3.39e-67 | 214 |
MS.gene44482.t1 | AT4G08780 | 40.968 | 310 | 171 | 6 | 23 | 323 | 20 | 326 | 4.44e-67 | 214 |
MS.gene44482.t1 | AT3G01190 | 39.683 | 315 | 171 | 8 | 17 | 320 | 11 | 317 | 5.30e-67 | 213 |
MS.gene44482.t1 | AT3G49120 | 39.571 | 326 | 182 | 8 | 10 | 323 | 12 | 334 | 7.07e-67 | 214 |
MS.gene44482.t1 | AT2G38380 | 39.935 | 308 | 172 | 6 | 25 | 323 | 29 | 332 | 8.45e-67 | 213 |
MS.gene44482.t1 | AT5G17820 | 39.557 | 316 | 173 | 7 | 10 | 320 | 7 | 309 | 1.32e-66 | 212 |
MS.gene44482.t1 | AT4G33420 | 37.812 | 320 | 189 | 6 | 1 | 320 | 12 | 321 | 1.71e-66 | 212 |
MS.gene44482.t1 | AT4G33420 | 37.812 | 320 | 189 | 6 | 1 | 320 | 59 | 368 | 8.09e-66 | 211 |
MS.gene44482.t1 | AT4G08770 | 40.323 | 310 | 173 | 6 | 23 | 323 | 20 | 326 | 1.07e-65 | 210 |
MS.gene44482.t1 | AT5G17820 | 39.557 | 316 | 173 | 7 | 10 | 320 | 60 | 362 | 1.13e-65 | 211 |
MS.gene44482.t1 | AT4G16270 | 40.803 | 299 | 164 | 7 | 32 | 323 | 55 | 347 | 1.31e-65 | 210 |
MS.gene44482.t1 | AT5G64120 | 40.404 | 297 | 163 | 7 | 32 | 323 | 40 | 327 | 1.79e-65 | 209 |
MS.gene44482.t1 | AT5G19890 | 39.640 | 333 | 177 | 9 | 1 | 323 | 8 | 326 | 2.67e-65 | 209 |
MS.gene44482.t1 | AT5G15180 | 37.072 | 321 | 187 | 7 | 12 | 323 | 14 | 328 | 4.01e-65 | 208 |
MS.gene44482.t1 | AT5G05340 | 38.436 | 307 | 172 | 5 | 21 | 320 | 24 | 320 | 1.14e-64 | 207 |
MS.gene44482.t1 | AT2G38390 | 38.111 | 307 | 179 | 5 | 25 | 323 | 29 | 332 | 2.91e-64 | 207 |
MS.gene44482.t1 | AT2G24800 | 37.459 | 307 | 177 | 5 | 25 | 323 | 29 | 328 | 2.97e-64 | 206 |
MS.gene44482.t1 | AT1G14540 | 36.677 | 319 | 194 | 5 | 6 | 323 | 3 | 314 | 7.99e-64 | 204 |
MS.gene44482.t1 | AT1G14550 | 37.423 | 326 | 195 | 8 | 1 | 323 | 1 | 320 | 1.16e-63 | 204 |
MS.gene44482.t1 | AT2G41480 | 37.349 | 332 | 186 | 8 | 1 | 321 | 5 | 325 | 2.71e-63 | 204 |
MS.gene44482.t1 | AT5G39580 | 39.264 | 326 | 178 | 10 | 8 | 323 | 3 | 318 | 3.19e-63 | 203 |
MS.gene44482.t1 | AT2G39040 | 39.228 | 311 | 172 | 8 | 25 | 323 | 44 | 349 | 3.73e-63 | 204 |
MS.gene44482.t1 | AT5G64110 | 39.535 | 301 | 165 | 7 | 31 | 323 | 38 | 329 | 8.39e-63 | 202 |
MS.gene44482.t1 | AT1G34510 | 37.460 | 315 | 183 | 7 | 7 | 320 | 4 | 305 | 1.23e-61 | 199 |
MS.gene44482.t1 | AT4G26010 | 35.826 | 321 | 194 | 6 | 4 | 323 | 27 | 336 | 2.24e-61 | 199 |
MS.gene44482.t1 | AT4G26010 | 36.076 | 316 | 190 | 6 | 9 | 323 | 4 | 308 | 5.78e-61 | 197 |
MS.gene44482.t1 | AT2G22420 | 36.593 | 317 | 189 | 6 | 12 | 323 | 9 | 318 | 2.07e-60 | 196 |
MS.gene44482.t1 | AT1G77100 | 37.383 | 321 | 184 | 9 | 11 | 321 | 3 | 316 | 3.38e-59 | 193 |
MS.gene44482.t1 | AT5G58400 | 38.538 | 301 | 173 | 7 | 25 | 320 | 28 | 321 | 6.56e-58 | 189 |
MS.gene44482.t1 | AT4G25980 | 36.036 | 333 | 188 | 9 | 8 | 323 | 1 | 325 | 1.19e-57 | 189 |
MS.gene44482.t1 | AT1G49570 | 37.049 | 305 | 179 | 6 | 25 | 320 | 46 | 346 | 3.90e-57 | 188 |
MS.gene44482.t1 | AT2G43480 | 36.129 | 310 | 177 | 9 | 23 | 320 | 31 | 331 | 1.34e-54 | 181 |
MS.gene44482.t1 | AT5G22410 | 34.347 | 329 | 194 | 11 | 3 | 320 | 4 | 321 | 8.46e-54 | 179 |
MS.gene44482.t1 | AT1G44970 | 35.897 | 312 | 180 | 6 | 24 | 323 | 42 | 345 | 1.79e-53 | 179 |
MS.gene44482.t1 | AT5G58390 | 36.943 | 314 | 186 | 7 | 12 | 320 | 6 | 312 | 1.84e-52 | 175 |
MS.gene44482.t1 | AT5G64100 | 36.333 | 300 | 172 | 8 | 32 | 323 | 42 | 330 | 2.58e-52 | 175 |
MS.gene44482.t1 | AT1G30870 | 36.304 | 303 | 174 | 8 | 27 | 321 | 51 | 342 | 4.30e-52 | 175 |
MS.gene44482.t1 | AT2G35380 | 36.000 | 300 | 178 | 5 | 32 | 320 | 35 | 331 | 8.61e-52 | 174 |
MS.gene44482.t1 | AT5G24070 | 35.738 | 305 | 174 | 9 | 31 | 322 | 38 | 333 | 1.03e-51 | 174 |
MS.gene44482.t1 | AT4G21960 | 32.298 | 322 | 206 | 6 | 6 | 322 | 11 | 325 | 1.68e-51 | 173 |
MS.gene44482.t1 | AT4G33870 | 31.325 | 332 | 184 | 5 | 30 | 321 | 71 | 398 | 1.94e-51 | 175 |
MS.gene44482.t1 | AT2G37130 | 33.333 | 300 | 192 | 5 | 25 | 320 | 28 | 323 | 2.25e-47 | 162 |
MS.gene44482.t1 | AT2G37130 | 33.220 | 295 | 189 | 5 | 30 | 320 | 2 | 292 | 5.16e-47 | 160 |
MS.gene44482.t1 | AT1G68850 | 31.699 | 306 | 193 | 7 | 27 | 320 | 30 | 331 | 8.75e-47 | 161 |
MS.gene44482.t1 | AT3G17070 | 33.951 | 324 | 198 | 7 | 8 | 320 | 17 | 335 | 1.73e-45 | 158 |
MS.gene44482.t1 | AT2G35380 | 35.652 | 230 | 135 | 4 | 102 | 320 | 16 | 243 | 1.74e-36 | 132 |
MS.gene44482.t1 | AT2G24800 | 40.113 | 177 | 97 | 4 | 25 | 201 | 29 | 196 | 4.58e-32 | 120 |
MS.gene44482.t1 | AT3G17070 | 31.923 | 260 | 164 | 6 | 69 | 320 | 18 | 272 | 1.80e-31 | 119 |
MS.gene44482.t1 | AT5G39580 | 41.089 | 202 | 104 | 8 | 8 | 204 | 3 | 194 | 2.02e-30 | 115 |
MS.gene44482.t1 | AT4G25980 | 39.303 | 201 | 107 | 7 | 8 | 201 | 46 | 238 | 6.07e-30 | 115 |
MS.gene44482.t1 | AT4G32320 | 27.586 | 290 | 138 | 10 | 33 | 309 | 95 | 325 | 7.57e-18 | 83.2 |
MS.gene44482.t1 | AT4G35970 | 27.481 | 262 | 138 | 9 | 58 | 312 | 30 | 246 | 2.71e-15 | 75.1 |
MS.gene44482.t1 | AT3G09640 | 25.442 | 283 | 156 | 10 | 37 | 307 | 7 | 246 | 3.54e-15 | 74.3 |
MS.gene44482.t1 | AT3G09640 | 25.442 | 283 | 156 | 10 | 37 | 307 | 7 | 246 | 3.54e-15 | 74.3 |
MS.gene44482.t1 | AT4G35970 | 34.211 | 152 | 83 | 5 | 58 | 206 | 30 | 167 | 4.84e-13 | 67.8 |
MS.gene44482.t1 | AT3G42570 | 35.043 | 117 | 70 | 4 | 83 | 197 | 37 | 149 | 2.29e-11 | 61.6 |
Find 59 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCACTGCCATGACCAAAT+TGG | 0.231586 | 8.1:-25775349 | MS.gene44482:CDS |
TCAAGATCTTCAGATGTAAA+TGG | 0.265657 | 8.1:-25777036 | MS.gene44482:CDS |
CACTGGAGTTTGAATTCTAT+TGG | 0.278166 | 8.1:+25775614 | None:intergenic |
CTAACAATGCTTTGAACATT+AGG | 0.281568 | 8.1:+25777963 | None:intergenic |
AACTCCGATACGACCCAATT+TGG | 0.297935 | 8.1:+25775335 | None:intergenic |
TCCATCCTATACAGTAGAAT+TGG | 0.334491 | 8.1:-25777079 | MS.gene44482:CDS |
TCCATGTTGATGGCTATTCT+TGG | 0.339989 | 8.1:+25775528 | None:intergenic |
TACTCGAGATGTCATTAATC+TGG | 0.348885 | 8.1:-25777569 | MS.gene44482:intron |
AGTTGAGCAAAAGTTGTATA+TGG | 0.351178 | 8.1:+25778014 | None:intergenic |
TTGTGCTGATATTCTTGCTT+TGG | 0.367395 | 8.1:-25777593 | MS.gene44482:CDS |
GGAGTTAAAACTGCAAGAAA+TGG | 0.372756 | 8.1:-25775318 | MS.gene44482:CDS |
ATCACTGCCATGACCAAATT+GGG | 0.372936 | 8.1:-25775348 | MS.gene44482:CDS |
GTAGAATTGGGAAGATTTGA+TGG | 0.379976 | 8.1:-25777066 | MS.gene44482:CDS |
ATTCTTGGATCAACATTCCT+AGG | 0.381533 | 8.1:+25775543 | None:intergenic |
TAGGACAAATGTTAGCATAA+TGG | 0.381734 | 8.1:+25777982 | None:intergenic |
GGTCATGGCAGTGATGAAAT+TGG | 0.384538 | 8.1:+25775356 | None:intergenic |
ACAGACATGATTGCCCTATC+AGG | 0.392047 | 8.1:-25776943 | MS.gene44482:intron |
GGGTTGTGATGCTTCAGTTT+TGG | 0.398402 | 8.1:-25777749 | MS.gene44482:CDS |
AGCTGATTCAAATTGAAACT+TGG | 0.401008 | 8.1:+25777000 | None:intergenic |
GCCTTCGACAATTACCTGAT+AGG | 0.404041 | 8.1:+25776929 | None:intergenic |
AGTTGTTGGGTCCATGTTGA+TGG | 0.405958 | 8.1:+25775518 | None:intergenic |
TTGTTCAATGTGGGGTCCAC+TGG | 0.416775 | 8.1:+25775597 | None:intergenic |
TCTTCCCAATTCTACTGTAT+AGG | 0.418242 | 8.1:+25777074 | None:intergenic |
TCATCCTGAAAATTTGTCAT+TGG | 0.438404 | 8.1:-25777692 | MS.gene44482:CDS |
TTTACAGGTGCACACACTCT+TGG | 0.452317 | 8.1:-25775660 | MS.gene44482:intron |
TCAAATGTTCGAGGAGTTGT+TGG | 0.452682 | 8.1:+25775504 | None:intergenic |
CAAATGTTAGCATAATGGTT+TGG | 0.458482 | 8.1:+25777987 | None:intergenic |
CCATCCTATACAGTAGAATT+GGG | 0.466160 | 8.1:-25777078 | MS.gene44482:CDS |
TCTTCACTGATACAAGATCT+AGG | 0.468897 | 8.1:-25775422 | MS.gene44482:CDS |
CCTGAAAATTTGTCATTGGC+AGG | 0.475184 | 8.1:-25777688 | MS.gene44482:CDS |
AAGAAGAGACGAAGGGTAGC+AGG | 0.477177 | 8.1:+25777897 | None:intergenic |
AGCATATTGTTTGTTCAATG+TGG | 0.491763 | 8.1:+25775587 | None:intergenic |
GCATATTGTTTGTTCAATGT+GGG | 0.494911 | 8.1:+25775588 | None:intergenic |
TTCAAATTGAAACTTGGCTG+AGG | 0.495968 | 8.1:+25777006 | None:intergenic |
GAGTTAAAACTGCAAGAAAT+GGG | 0.498292 | 8.1:-25775317 | MS.gene44482:CDS |
TGATTAAAGCACAGTACAAT+CGG | 0.508842 | 8.1:+25775284 | None:intergenic |
CAAATGTTCGAGGAGTTGTT+GGG | 0.508905 | 8.1:+25775505 | None:intergenic |
TGGAAATAACAAAGCTGAGA+AGG | 0.522465 | 8.1:-25777716 | MS.gene44482:CDS |
CCTTCGACAATTACCTGATA+GGG | 0.524622 | 8.1:+25776930 | None:intergenic |
CATATTGTTTGTTCAATGTG+GGG | 0.540233 | 8.1:+25775589 | None:intergenic |
TAGATCTTGTATCAGTGAAG+AGG | 0.543548 | 8.1:+25775424 | None:intergenic |
AATACTCTCTTTGCAAACAA+TGG | 0.547057 | 8.1:-25776976 | MS.gene44482:CDS |
CCCAATTCTACTGTATAGGA+TGG | 0.557797 | 8.1:+25777078 | None:intergenic |
TTCTTGGATCAACATTCCTA+GGG | 0.569014 | 8.1:+25775544 | None:intergenic |
TGTTATACTAGTGTGGTCAC+TGG | 0.569409 | 8.1:-25778057 | MS.gene44482:CDS |
ATGACCAAATTGGGTCGTAT+CGG | 0.570864 | 8.1:-25775339 | MS.gene44482:CDS |
AGTTGCAACAAATGTGCCCT+AGG | 0.571097 | 8.1:-25775560 | MS.gene44482:CDS |
TAAACATTGTCAAATGTTCG+AGG | 0.575917 | 8.1:+25775495 | None:intergenic |
AATTTGTCATTGGCAGGTGA+TGG | 0.576080 | 8.1:-25777682 | MS.gene44482:CDS |
TCAAATTGAAACTTGGCTGA+GGG | 0.582157 | 8.1:+25777007 | None:intergenic |
GATCTTCAGATGTAAATGGA+AGG | 0.610763 | 8.1:-25777032 | MS.gene44482:CDS |
GTTATAATGTTATACTAGTG+TGG | 0.617631 | 8.1:-25778064 | MS.gene44482:CDS |
GAAACTTTGTTTCTGCACTG+TGG | 0.625737 | 8.1:+25777616 | None:intergenic |
GATACGACCCAATTTGGTCA+TGG | 0.625744 | 8.1:+25775341 | None:intergenic |
AATCGTGAAAGAAGAGACGA+AGG | 0.634613 | 8.1:+25777889 | None:intergenic |
TCCAAGAATAGCCATCAACA+TGG | 0.642698 | 8.1:-25775529 | MS.gene44482:CDS |
CAATAGAATTCAAACTCCAG+TGG | 0.648124 | 8.1:-25775613 | MS.gene44482:CDS |
TTGTGTACACCACAGGCTGG+TGG | 0.679882 | 8.1:-25777102 | MS.gene44482:intron |
ATCGTGAAAGAAGAGACGAA+GGG | 0.698460 | 8.1:+25777890 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGATAAAATAAAAAACAAA+AGG | - | chr8.1:25776684-25776703 | MS.gene44482:intron | 10.0% |
!!! | AATTTTAATATACATAATCA+TGG | - | chr8.1:25777119-25777138 | MS.gene44482:intron | 10.0% |
!! | ATTTATGTCTATTATTAGTT+TGG | - | chr8.1:25777450-25777469 | MS.gene44482:intron | 15.0% |
!! | CATATACAAATAATTATCAT+TGG | - | chr8.1:25776798-25776817 | MS.gene44482:intron | 15.0% |
!! | TGAAAATAGTTTATAAATAG+TGG | - | chr8.1:25775973-25775992 | MS.gene44482:intron | 15.0% |
!! | TTGTTGTAAAAAAATTTCAA+AGG | + | chr8.1:25777077-25777096 | None:intergenic | 15.0% |
!!! | AAAGATAGTGTTATTTTTTT+AGG | - | chr8.1:25776562-25776581 | MS.gene44482:intron | 15.0% |
!!! | ATGATTACTATTTTGTTATA+GGG | - | chr8.1:25775589-25775608 | MS.gene44482:CDS | 15.0% |
!!! | ATTAAAAAGAGTTTTCATAT+TGG | - | chr8.1:25775851-25775870 | MS.gene44482:intron | 15.0% |
!!! | ATTTTTTATTCTTTGCTAAT+TGG | - | chr8.1:25776899-25776918 | MS.gene44482:intron | 15.0% |
!!! | TATGATTACTATTTTGTTAT+AGG | - | chr8.1:25775588-25775607 | MS.gene44482:CDS | 15.0% |
!!! | TTAATGTTATTTTAGAGATT+TGG | + | chr8.1:25777549-25777568 | None:intergenic | 15.0% |
!!! | TTTTCTTTTTCATATTTTAC+AGG | - | chr8.1:25777683-25777702 | MS.gene44482:CDS | 15.0% |
!!! | TTTTTTTGGGTATTATTTTA+AGG | - | chr8.1:25776738-25776757 | MS.gene44482:intron | 15.0% |
!! | ATATAAAAATTGAAAACCGT+AGG | + | chr8.1:25776055-25776074 | None:intergenic | 20.0% |
!! | TAAAAATTGACAAATGATTG+TGG | + | chr8.1:25777411-25777430 | None:intergenic | 20.0% |
!! | TATAAAAATTGAAAACCGTA+GGG | + | chr8.1:25776054-25776073 | None:intergenic | 20.0% |
!!! | AAGTAAACTCAATAATTTGT+AGG | + | chr8.1:25776852-25776871 | None:intergenic | 20.0% |
!!! | AGTAAACTCAATAATTTGTA+GGG | + | chr8.1:25776851-25776870 | None:intergenic | 20.0% |
!!! | ATAAATAGTGGTATTTTTCA+TGG | - | chr8.1:25775985-25776004 | MS.gene44482:intron | 20.0% |
!!! | ATTATTTTTGTTTCTCTATG+CGG | - | chr8.1:25776073-25776092 | MS.gene44482:intron | 20.0% |
! | AAAAATCTTCAACAAGGAAA+AGG | - | chr8.1:25777890-25777909 | MS.gene44482:CDS | 25.0% |
! | AAAATAAGCACATTCATAGA+GGG | + | chr8.1:25777667-25777686 | None:intergenic | 25.0% |
! | ACATAGTACAAATATGCTAA+TGG | + | chr8.1:25776477-25776496 | None:intergenic | 25.0% |
! | CAATACAATTCAAATATGTG+TGG | + | chr8.1:25776107-25776126 | None:intergenic | 25.0% |
! | CATAGTACAAATATGCTAAT+GGG | + | chr8.1:25776476-25776495 | None:intergenic | 25.0% |
! | GTAACCAAAATATTCTTAAG+TGG | + | chr8.1:25776711-25776730 | None:intergenic | 25.0% |
! | GTTATAATGTTATACTAGTG+TGG | - | chr8.1:25775294-25775313 | MS.gene44482:CDS | 25.0% |
! | TAATACCCAAAAAAAAGTTC+TGG | + | chr8.1:25776733-25776752 | None:intergenic | 25.0% |
! | TACTACAAAAATCTTCAACA+AGG | - | chr8.1:25777884-25777903 | MS.gene44482:CDS | 25.0% |
! | TATACATAATCATGGTAGAT+AGG | - | chr8.1:25777127-25777146 | MS.gene44482:intron | 25.0% |
!! | GATCCAAGAAAGTTTTTAAA+TGG | - | chr8.1:25776502-25776521 | MS.gene44482:intron | 25.0% |
!! | GTTGTCACTTAAATTTAATG+TGG | - | chr8.1:25776824-25776843 | MS.gene44482:intron | 25.0% |
!! | TTTAAGAATTTTTGTCCCTA+CGG | - | chr8.1:25776036-25776055 | MS.gene44482:intron | 25.0% |
!!! | AACACTATCTTTTTTTGTCA+AGG | + | chr8.1:25776554-25776573 | None:intergenic | 25.0% |
!!! | GTTATTTTAGAGATTTGGAT+TGG | + | chr8.1:25777544-25777563 | None:intergenic | 25.0% |
!!! | TTGTTGTTTTGTTTACTTGT+TGG | + | chr8.1:25777599-25777618 | None:intergenic | 25.0% |
AATACTCTCTTTGCAAACAA+TGG | - | chr8.1:25776382-25776401 | MS.gene44482:intron | 30.0% | |
AATGATGTCACAATCTTGTT+TGG | - | chr8.1:25777021-25777040 | MS.gene44482:CDS | 30.0% | |
AATTCAAATATGTGTGGTGT+TGG | + | chr8.1:25776101-25776120 | None:intergenic | 30.0% | |
AGCATATTGTTTGTTCAATG+TGG | + | chr8.1:25777774-25777793 | None:intergenic | 30.0% | |
AGTTGAGCAAAAGTTGTATA+TGG | + | chr8.1:25775347-25775366 | None:intergenic | 30.0% | |
CAAATGTTAGCATAATGGTT+TGG | + | chr8.1:25775374-25775393 | None:intergenic | 30.0% | |
CATATTGTTTGTTCAATGTG+GGG | + | chr8.1:25777772-25777791 | None:intergenic | 30.0% | |
GAAAATAAGCACATTCATAG+AGG | + | chr8.1:25777668-25777687 | None:intergenic | 30.0% | |
GACCCATTTAATTAAAATGG+TGG | + | chr8.1:25776454-25776473 | None:intergenic | 30.0% | |
GAGTTAAAACTGCAAGAAAT+GGG | - | chr8.1:25778041-25778060 | MS.gene44482:CDS | 30.0% | |
GCATATTGTTTGTTCAATGT+GGG | + | chr8.1:25777773-25777792 | None:intergenic | 30.0% | |
TAAACATTGTCAAATGTTCG+AGG | + | chr8.1:25777866-25777885 | None:intergenic | 30.0% | |
TAACTGATCATTTGTCAAAG+AGG | + | chr8.1:25776660-25776679 | None:intergenic | 30.0% | |
TAGGACAAATGTTAGCATAA+TGG | + | chr8.1:25775379-25775398 | None:intergenic | 30.0% | |
TCAAGATCTTCAGATGTAAA+TGG | - | chr8.1:25776322-25776341 | MS.gene44482:intron | 30.0% | |
TCATCCTGAAAATTTGTCAT+TGG | - | chr8.1:25775666-25775685 | MS.gene44482:intron | 30.0% | |
TGGGACCCATTTAATTAAAA+TGG | + | chr8.1:25776457-25776476 | None:intergenic | 30.0% | |
TTATTTGAGTGCACAAAACT+CGG | + | chr8.1:25776153-25776172 | None:intergenic | 30.0% | |
TTGCTAATTGGAGTTCAATA+TGG | - | chr8.1:25776911-25776930 | MS.gene44482:intron | 30.0% | |
! | AGCTGATTCAAATTGAAACT+TGG | + | chr8.1:25776361-25776380 | None:intergenic | 30.0% |
! | AGGACCACTTAAGAATATTT+TGG | - | chr8.1:25776704-25776723 | MS.gene44482:intron | 30.0% |
! | CATGTTTTATACTGTTCTCT+AGG | - | chr8.1:25777288-25777307 | MS.gene44482:intron | 30.0% |
! | CCAAGAAAGTTTTTAAATGG+CGG | - | chr8.1:25776505-25776524 | MS.gene44482:intron | 30.0% |
! | CTAACAATGCTTTGAACATT+AGG | + | chr8.1:25775398-25775417 | None:intergenic | 30.0% |
! | GTTAACTCTTTTGCAACTAA+TGG | - | chr8.1:25777965-25777984 | MS.gene44482:CDS | 30.0% |
!!! | AGGCCACCATTTTAATTAAA+TGG | - | chr8.1:25776448-25776467 | MS.gene44482:intron | 30.0% |
!!! | GGCCACCATTTTAATTAAAT+GGG | - | chr8.1:25776449-25776468 | MS.gene44482:intron | 30.0% |
!!! | GGTTACCAGAACTTTTTTTT+GGG | - | chr8.1:25776725-25776744 | MS.gene44482:intron | 30.0% |
!!! | TGGTTACCAGAACTTTTTTT+TGG | - | chr8.1:25776724-25776743 | MS.gene44482:intron | 30.0% |
AATTGGAGTTCAATATGGTG+TGG | - | chr8.1:25776916-25776935 | MS.gene44482:intron | 35.0% | |
ATTCTTGGATCAACATTCCT+AGG | + | chr8.1:25777818-25777837 | None:intergenic | 35.0% | |
CAATAGAATTCAAACTCCAG+TGG | - | chr8.1:25777745-25777764 | MS.gene44482:CDS | 35.0% | |
CACTGGAGTTTGAATTCTAT+TGG | + | chr8.1:25777747-25777766 | None:intergenic | 35.0% | |
CCATCCTATACAGTAGAATT+GGG | - | chr8.1:25776280-25776299 | MS.gene44482:intron | 35.0% | |
CCGCCATTTAAAAACTTTCT+TGG | + | chr8.1:25776508-25776527 | None:intergenic | 35.0% | |
GATCTTCAGATGTAAATGGA+AGG | - | chr8.1:25776326-25776345 | MS.gene44482:intron | 35.0% | |
GGAGTTAAAACTGCAAGAAA+TGG | - | chr8.1:25778040-25778059 | MS.gene44482:CDS | 35.0% | |
GTAGAATTGGGAAGATTTGA+TGG | - | chr8.1:25776292-25776311 | MS.gene44482:intron | 35.0% | |
TACTCGAGATGTCATTAATC+TGG | - | chr8.1:25775789-25775808 | MS.gene44482:intron | 35.0% | |
TAGATCTTGTATCAGTGAAG+AGG | + | chr8.1:25777937-25777956 | None:intergenic | 35.0% | |
TCAAATTGAAACTTGGCTGA+GGG | + | chr8.1:25776354-25776373 | None:intergenic | 35.0% | |
TCCATCCTATACAGTAGAAT+TGG | - | chr8.1:25776279-25776298 | MS.gene44482:intron | 35.0% | |
TCTTCACTGATACAAGATCT+AGG | - | chr8.1:25777936-25777955 | MS.gene44482:CDS | 35.0% | |
TCTTCCCAATTCTACTGTAT+AGG | + | chr8.1:25776287-25776306 | None:intergenic | 35.0% | |
TGGAAATAACAAAGCTGAGA+AGG | - | chr8.1:25775642-25775661 | MS.gene44482:CDS | 35.0% | |
TTCAAATTGAAACTTGGCTG+AGG | + | chr8.1:25776355-25776374 | None:intergenic | 35.0% | |
TTCTTGGATCAACATTCCTA+GGG | + | chr8.1:25777817-25777836 | None:intergenic | 35.0% | |
! | CTACAAAAGTATGAACTGTC+TGG | + | chr8.1:25777629-25777648 | None:intergenic | 35.0% |
! | TTGTGCTGATATTCTTGCTT+TGG | - | chr8.1:25775765-25775784 | MS.gene44482:intron | 35.0% |
!! | CTTTCACGATTGTTTTGTTC+AGG | - | chr8.1:25775481-25775500 | MS.gene44482:CDS | 35.0% |
AATCGTGAAAGAAGAGACGA+AGG | + | chr8.1:25775472-25775491 | None:intergenic | 40.0% | |
AATTTGTCATTGGCAGGTGA+TGG | - | chr8.1:25775676-25775695 | MS.gene44482:intron | 40.0% | |
ATCACTGCCATGACCAAATT+GGG | - | chr8.1:25778010-25778029 | MS.gene44482:CDS | 40.0% | |
ATCGTGAAAGAAGAGACGAA+GGG | + | chr8.1:25775471-25775490 | None:intergenic | 40.0% | |
ATGACCAAATTGGGTCGTAT+CGG | - | chr8.1:25778019-25778038 | MS.gene44482:CDS | 40.0% | |
CAAATGTTCGAGGAGTTGTT+GGG | + | chr8.1:25777856-25777875 | None:intergenic | 40.0% | |
CCCAATTCTACTGTATAGGA+TGG | + | chr8.1:25776283-25776302 | None:intergenic | 40.0% | |
CCTGAAAATTTGTCATTGGC+AGG | - | chr8.1:25775670-25775689 | MS.gene44482:intron | 40.0% | |
CCTTCGACAATTACCTGATA+GGG | + | chr8.1:25776431-25776450 | None:intergenic | 40.0% | |
TCAAATGTTCGAGGAGTTGT+TGG | + | chr8.1:25777857-25777876 | None:intergenic | 40.0% | |
TCCAAGAATAGCCATCAACA+TGG | - | chr8.1:25777829-25777848 | MS.gene44482:intron | 40.0% | |
TGTTATACTAGTGTGGTCAC+TGG | - | chr8.1:25775301-25775320 | MS.gene44482:CDS | 40.0% | |
TTGTCAATTGTGTACACCAC+AGG | - | chr8.1:25776249-25776268 | MS.gene44482:intron | 40.0% | |
! | CCTGCCAATGACAAATTTTC+AGG | + | chr8.1:25775673-25775692 | None:intergenic | 40.0% |
!! | GAAACTTTGTTTCTGCACTG+TGG | + | chr8.1:25775745-25775764 | None:intergenic | 40.0% |
!! | TCCATGTTGATGGCTATTCT+TGG | + | chr8.1:25777833-25777852 | None:intergenic | 40.0% |
!! | TTGTGATGCTTCAGTTTTGG+TGG | - | chr8.1:25775612-25775631 | MS.gene44482:CDS | 40.0% |
AACTCCGATACGACCCAATT+TGG | + | chr8.1:25778026-25778045 | None:intergenic | 45.0% | |
ACAGACATGATTGCCCTATC+AGG | - | chr8.1:25776415-25776434 | MS.gene44482:intron | 45.0% | |
AGTTGCAACAAATGTGCCCT+AGG | - | chr8.1:25777798-25777817 | MS.gene44482:intron | 45.0% | |
AGTTGTTGGGTCCATGTTGA+TGG | + | chr8.1:25777843-25777862 | None:intergenic | 45.0% | |
CATCACTGCCATGACCAAAT+TGG | - | chr8.1:25778009-25778028 | MS.gene44482:CDS | 45.0% | |
CCCTATCAGGTAATTGTCGA+AGG | - | chr8.1:25776428-25776447 | MS.gene44482:intron | 45.0% | |
GATACGACCCAATTTGGTCA+TGG | + | chr8.1:25778020-25778039 | None:intergenic | 45.0% | |
GCCTTCGACAATTACCTGAT+AGG | + | chr8.1:25776432-25776451 | None:intergenic | 45.0% | |
GGTCATGGCAGTGATGAAAT+TGG | + | chr8.1:25778005-25778024 | None:intergenic | 45.0% | |
TTTACAGGTGCACACACTCT+TGG | - | chr8.1:25777698-25777717 | MS.gene44482:CDS | 45.0% | |
! | GGGTTGTGATGCTTCAGTTT+TGG | - | chr8.1:25775609-25775628 | MS.gene44482:CDS | 45.0% |
!! | TCAGTTTTGGTGGCATCAAG+TGG | - | chr8.1:25775622-25775641 | MS.gene44482:CDS | 45.0% |
!! | TATTAATATATTAATCAAAT+TGG | + | chr8.1:25775535-25775554 | None:intergenic | 5.0% |
AAGAAGAGACGAAGGGTAGC+AGG | + | chr8.1:25775464-25775483 | None:intergenic | 50.0% | |
CAATTGTGTACACCACAGGC+TGG | - | chr8.1:25776253-25776272 | MS.gene44482:intron | 50.0% | |
TTGTTCAATGTGGGGTCCAC+TGG | + | chr8.1:25777764-25777783 | None:intergenic | 50.0% | |
TTGTGTACACCACAGGCTGG+TGG | - | chr8.1:25776256-25776275 | MS.gene44482:intron | 55.0% | |
TAGGATGGACCACCAGCCTG+TGG | + | chr8.1:25776268-25776287 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 25775287 | 25778093 | 25775287 | ID=MS.gene44482 |
chr8.1 | mRNA | 25775287 | 25778093 | 25775287 | ID=MS.gene44482.t1;Parent=MS.gene44482 |
chr8.1 | exon | 25777878 | 25778093 | 25777878 | ID=MS.gene44482.t1.exon1;Parent=MS.gene44482.t1 |
chr8.1 | CDS | 25777878 | 25778093 | 25777878 | ID=cds.MS.gene44482.t1;Parent=MS.gene44482.t1 |
chr8.1 | exon | 25777570 | 25777770 | 25777570 | ID=MS.gene44482.t1.exon2;Parent=MS.gene44482.t1 |
chr8.1 | CDS | 25777570 | 25777770 | 25777570 | ID=cds.MS.gene44482.t1;Parent=MS.gene44482.t1 |
chr8.1 | exon | 25776944 | 25777109 | 25776944 | ID=MS.gene44482.t1.exon3;Parent=MS.gene44482.t1 |
chr8.1 | CDS | 25776944 | 25777109 | 25776944 | ID=cds.MS.gene44482.t1;Parent=MS.gene44482.t1 |
chr8.1 | exon | 25775287 | 25775675 | 25775287 | ID=MS.gene44482.t1.exon4;Parent=MS.gene44482.t1 |
chr8.1 | CDS | 25775287 | 25775675 | 25775287 | ID=cds.MS.gene44482.t1;Parent=MS.gene44482.t1 |
Gene Sequence |
Protein sequence |