AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040564

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040564.t1 MTR_2g069090 94.624 372 19 1 1 371 1 372 0.0 726
MS.gene040564.t1 MTR_2g069190 90.027 371 37 0 1 371 1 371 0.0 704
MS.gene040564.t1 MTR_2g069210 81.132 371 66 1 1 371 1 367 0.0 633
MS.gene040564.t1 MTR_2g069300 70.868 357 103 1 16 371 2 358 0.0 551
MS.gene040564.t1 MTR_8g028435 71.671 353 96 2 20 371 15 364 0.0 538
MS.gene040564.t1 MTR_8g009090 68.548 372 108 3 1 371 1 364 0.0 522
MS.gene040564.t1 MTR_8g009160 68.272 353 108 2 20 371 15 364 0.0 515
MS.gene040564.t1 MTR_8g008930 67.560 373 111 4 1 371 1 365 0.0 514
MS.gene040564.t1 MTR_8g009110 67.308 364 113 4 11 371 5 365 0.0 510
MS.gene040564.t1 MTR_8g009170 67.887 355 108 4 20 371 15 366 2.80e-179 502
MS.gene040564.t1 MTR_8g009080 61.186 371 144 0 1 371 27 397 7.11e-171 482
MS.gene040564.t1 MTR_4g117880 63.514 370 126 5 5 371 3 366 3.32e-168 474
MS.gene040564.t1 MTR_1g043770 61.173 358 132 3 16 371 3 355 1.26e-162 459
MS.gene040564.t1 MTR_8g009150 61.017 354 113 4 20 371 15 345 1.63e-157 446
MS.gene040564.t1 MTR_1g043810 58.028 355 146 3 18 371 5 357 1.04e-155 442
MS.gene040564.t1 MTR_1g043775 58.592 355 144 3 18 371 5 357 6.99e-155 440
MS.gene040564.t1 MTR_8g009120 61.864 354 118 5 20 371 15 353 2.07e-153 436
MS.gene040564.t1 MTR_1g043760 59.207 353 142 2 18 370 5 355 3.79e-151 431
MS.gene040564.t1 MTR_8g041620 54.717 371 165 2 4 371 4 374 1.95e-146 419
MS.gene040564.t1 MTR_8g041600 54.717 371 165 2 4 371 4 374 8.53e-146 418
MS.gene040564.t1 MTR_7g056347 53.514 370 166 3 6 371 6 373 1.15e-140 404
MS.gene040564.t1 MTR_2g069010 52.394 376 172 4 1 371 2 375 3.00e-138 399
MS.gene040564.t1 MTR_1g093120 52.381 357 167 2 18 371 14 370 1.73e-137 396
MS.gene040564.t1 MTR_4g119410 54.400 375 165 3 1 371 1 373 2.30e-136 394
MS.gene040564.t1 MTR_1g093140 50.275 364 171 3 18 371 15 378 1.58e-134 389
MS.gene040564.t1 MTR_0032s0040 56.044 364 147 4 18 371 13 373 5.70e-134 387
MS.gene040564.t1 MTR_1g093110 52.486 362 162 4 18 371 15 374 2.11e-133 386
MS.gene040564.t1 MTR_8g006930 52.703 370 169 3 6 371 6 373 3.88e-133 385
MS.gene040564.t1 MTR_7g056393 53.784 370 165 3 6 371 6 373 3.55e-132 383
MS.gene040564.t1 MTR_8g063070 51.397 358 168 3 18 371 18 373 2.01e-131 381
MS.gene040564.t1 MTR_7g029655 52.893 363 161 4 16 371 11 370 2.07e-131 381
MS.gene040564.t1 MTR_2g069060 52.022 371 156 3 1 371 1 349 1.82e-130 378
MS.gene040564.t1 MTR_8g009170 66.421 271 86 3 20 288 15 282 6.46e-130 374
MS.gene040564.t1 MTR_8g062600 50.559 358 171 3 18 371 18 373 1.20e-128 374
MS.gene040564.t1 MTR_8g009080 60.764 288 113 0 1 288 27 314 4.15e-128 371
MS.gene040564.t1 MTR_2g069020 49.730 370 182 4 4 371 3 370 2.78e-127 370
MS.gene040564.t1 MTR_2g069020 49.730 370 182 4 4 371 3 370 1.26e-126 369
MS.gene040564.t1 MTR_2g068950 50.696 359 171 3 18 371 12 369 3.02e-126 368
MS.gene040564.t1 MTR_7g078010 50.811 370 176 3 6 371 6 373 3.46e-126 368
MS.gene040564.t1 MTR_8g009080 60.351 285 113 0 1 285 27 311 2.28e-125 364
MS.gene040564.t1 MTR_4g024660 49.441 358 175 3 18 371 18 373 3.60e-125 365
MS.gene040564.t1 MTR_1g043770 63.636 275 93 3 16 288 3 272 5.84e-125 362
MS.gene040564.t1 MTR_2g068960 50.418 359 172 3 18 371 12 369 4.15e-123 360
MS.gene040564.t1 MTR_1g043810 61.397 272 102 3 18 288 5 274 2.38e-122 356
MS.gene040564.t1 MTR_1g070185 49.157 356 176 2 16 371 17 367 4.97e-122 357
MS.gene040564.t1 MTR_1g043775 62.132 272 100 3 18 288 5 274 1.22e-121 353
MS.gene040564.t1 MTR_8g469400 48.324 358 166 5 18 371 18 360 2.15e-116 342
MS.gene040564.t1 MTR_8g009180 62.857 245 75 1 138 366 45 289 1.16e-106 315
MS.gene040564.t1 MTR_8g041600 52.083 288 136 1 4 289 4 291 1.32e-106 315
MS.gene040564.t1 MTR_7g105070 42.817 355 201 2 18 371 9 362 4.14e-104 311
MS.gene040564.t1 MTR_7g056353 46.070 369 165 5 6 370 8 346 9.44e-102 310
MS.gene040564.t1 MTR_7g078010 50.526 285 138 2 6 289 6 288 3.14e-94 284
MS.gene040564.t1 MTR_1g032140 43.944 355 192 4 18 370 15 364 1.07e-93 285
MS.gene040564.t1 MTR_1g032220 42.254 355 198 4 18 370 22 371 9.79e-93 282
MS.gene040564.t1 MTR_1g032250 41.690 355 200 4 18 370 22 371 1.81e-89 274
MS.gene040564.t1 MTR_2g069060 54.310 232 106 0 58 289 17 248 2.13e-88 267
MS.gene040564.t1 MTR_1g043840 56.250 176 73 1 182 353 50 225 1.33e-64 209
MS.gene040564.t1 MTR_1g043840 59.740 77 30 1 75 151 253 328 1.68e-25 105
MS.gene040564.t1 MTR_4g015790 34.540 359 209 8 33 369 14 368 2.45e-62 204
MS.gene040564.t1 MTR_7g068650 34.540 359 218 7 24 369 6 360 4.00e-62 203
MS.gene040564.t1 MTR_1g044105 55.882 170 69 3 16 180 3 171 1.50e-60 193
MS.gene040564.t1 MTR_3g045230 36.648 352 197 10 32 371 17 354 7.56e-60 197
MS.gene040564.t1 MTR_2g068840 34.473 351 209 8 32 371 21 361 1.03e-59 197
MS.gene040564.t1 MTR_7g102820 33.681 383 217 13 16 371 8 380 3.41e-57 191
MS.gene040564.t1 MTR_3g043900 35.411 353 199 12 32 371 17 353 1.54e-56 188
MS.gene040564.t1 MTR_3g092890 33.333 309 190 5 68 370 38 336 1.42e-55 186
MS.gene040564.t1 MTR_1g062110 34.270 356 210 11 32 371 26 373 4.67e-55 185
MS.gene040564.t1 MTR_5g055690 32.479 351 221 7 23 366 3 344 5.72e-55 184
MS.gene040564.t1 MTR_5g055900 33.138 341 213 8 32 366 12 343 3.73e-54 182
MS.gene040564.t1 MTR_7g102720 34.700 317 184 7 64 371 33 335 4.96e-54 181
MS.gene040564.t1 MTR_0009s0050 30.994 342 219 8 32 366 12 343 9.21e-54 181
MS.gene040564.t1 MTR_0009s0050 30.994 342 219 8 32 366 12 343 1.29e-53 181
MS.gene040564.t1 MTR_5g055680 32.456 342 212 7 33 366 13 343 2.50e-53 180
MS.gene040564.t1 MTR_1g034140 37.785 307 157 9 68 353 27 320 2.55e-53 180
MS.gene040564.t1 MTR_8g024120 31.975 319 195 4 63 371 37 343 2.98e-53 179
MS.gene040564.t1 MTR_5g048850 33.623 345 211 11 32 369 12 345 1.05e-52 178
MS.gene040564.t1 MTR_1g034120 31.657 338 199 7 37 353 4 330 1.43e-52 178
MS.gene040564.t1 MTR_3g063180 32.665 349 201 8 33 362 10 343 2.32e-52 177
MS.gene040564.t1 MTR_4g087110 32.508 323 185 7 68 365 26 340 2.47e-52 177
MS.gene040564.t1 MTR_0328s0030 31.304 345 224 6 32 371 10 346 2.64e-52 177
MS.gene040564.t1 MTR_5g082750 34.405 311 192 6 68 370 49 355 7.63e-52 176
MS.gene040564.t1 MTR_5g055820 32.277 347 219 9 32 371 12 349 1.29e-51 176
MS.gene040564.t1 MTR_1g070135 33.333 327 195 7 52 370 27 338 1.41e-51 175
MS.gene040564.t1 MTR_6g015950 35.241 332 197 9 44 368 16 336 1.47e-51 175
MS.gene040564.t1 MTR_1g070120 35.599 309 183 9 68 369 38 337 1.64e-51 175
MS.gene040564.t1 MTR_5g048470 30.725 345 228 5 32 371 17 355 1.71e-51 176
MS.gene040564.t1 MTR_8g064200 31.014 345 226 6 32 371 17 354 1.97e-51 175
MS.gene040564.t1 MTR_8g064200 31.014 345 226 6 32 371 22 359 3.70e-51 175
MS.gene040564.t1 MTR_5g048570 30.994 342 217 9 32 366 12 341 6.27e-51 174
MS.gene040564.t1 MTR_3g070860 30.919 359 236 6 20 370 2 356 8.82e-51 174
MS.gene040564.t1 MTR_2g068800 33.571 280 155 5 32 303 21 277 1.13e-50 171
MS.gene040564.t1 MTR_5g048740 32.551 341 216 8 32 366 10 342 1.72e-50 172
MS.gene040564.t1 MTR_5g032870 33.227 313 195 6 68 371 38 345 2.17e-50 172
MS.gene040564.t1 MTR_1g034060 31.065 338 201 7 37 353 4 330 2.82e-50 172
MS.gene040564.t1 MTR_2g072890 29.878 328 214 6 52 371 36 355 3.60e-50 172
MS.gene040564.t1 MTR_0009s0480 32.845 341 214 8 32 366 11 342 4.70e-50 171
MS.gene040564.t1 MTR_2g072910 30.612 343 221 7 32 366 16 349 2.59e-49 170
MS.gene040564.t1 MTR_4g087090 34.098 305 171 9 68 351 30 325 3.50e-49 169
MS.gene040564.t1 MTR_5g065010 32.817 323 202 7 55 371 29 342 8.02e-49 168
MS.gene040564.t1 MTR_4g087120 32.051 312 179 7 68 354 26 329 6.01e-48 166
MS.gene040564.t1 MTR_5g048550 29.855 345 229 7 32 371 12 348 6.94e-48 166
MS.gene040564.t1 MTR_1g070085 30.056 356 223 7 23 370 1 338 1.27e-47 165
MS.gene040564.t1 MTR_1g070085 30.056 356 223 7 23 370 1 338 1.27e-47 165
MS.gene040564.t1 MTR_2g083030 34.495 287 172 4 68 351 37 310 5.08e-47 163
MS.gene040564.t1 MTR_4g087100 33.016 315 168 10 68 352 26 327 1.26e-46 162
MS.gene040564.t1 MTR_5g032880 33.226 310 187 6 68 369 38 335 1.67e-46 168
MS.gene040564.t1 MTR_5g032880 31.511 311 203 5 68 371 376 683 9.17e-45 164
MS.gene040564.t1 MTR_1g033810 32.177 317 204 7 57 368 37 347 1.73e-46 162
MS.gene040564.t1 MTR_4g087140 31.310 313 181 7 68 354 26 330 2.21e-46 162
MS.gene040564.t1 MTR_5g055800 30.435 345 226 7 32 371 12 347 2.66e-46 162
MS.gene040564.t1 MTR_3g091350 31.231 333 208 8 14 340 14 331 2.90e-46 162
MS.gene040564.t1 MTR_7g081710 29.942 344 226 6 35 371 16 351 9.94e-46 160
MS.gene040564.t1 MTR_4g093840 33.535 331 203 10 50 371 44 366 1.32e-45 160
MS.gene040564.t1 MTR_7g056370 42.623 183 102 2 27 208 6 186 3.53e-45 155
MS.gene040564.t1 MTR_3g083370 35.099 302 167 11 68 358 4 287 1.19e-44 156
MS.gene040564.t1 MTR_7g016080 32.615 325 190 11 44 359 16 320 1.80e-44 156
MS.gene040564.t1 MTR_7g016090 34.740 308 175 9 63 359 34 326 2.65e-44 156
MS.gene040564.t1 MTR_7g016090 34.740 308 175 9 63 359 36 328 2.75e-44 156
MS.gene040564.t1 MTR_2g025120 33.453 278 164 7 69 338 5 269 3.19e-44 155
MS.gene040564.t1 MTR_5g011250 32.047 337 210 9 33 354 8 340 5.48e-44 155
MS.gene040564.t1 MTR_5g085330 32.862 283 169 7 69 343 6 275 2.41e-43 153
MS.gene040564.t1 MTR_2g437380 31.629 313 199 6 68 371 50 356 2.78e-43 154
MS.gene040564.t1 MTR_3g091360 30.357 336 221 8 23 352 7 335 3.54e-43 154
MS.gene040564.t1 MTR_1g070080 30.351 313 198 7 68 371 38 339 2.05e-42 151
MS.gene040564.t1 MTR_4g099380 45.614 171 81 3 15 181 120 282 2.50e-42 149
MS.gene040564.t1 MTR_2g069070 42.541 181 85 1 1 181 1 162 4.83e-42 145
MS.gene040564.t1 MTR_5g022020 33.955 268 164 6 57 316 30 292 8.41e-42 150
MS.gene040564.t1 MTR_7g062580 27.893 337 227 8 32 361 19 346 9.99e-42 150
MS.gene040564.t1 MTR_3g058610 34.457 267 164 5 57 316 30 292 1.26e-41 149
MS.gene040564.t1 MTR_5g059130 31.056 322 204 6 44 358 20 330 3.57e-41 147
MS.gene040564.t1 MTR_7g062570 30.592 304 195 8 68 364 55 349 1.01e-40 147
MS.gene040564.t1 MTR_8g075890 32.463 268 168 6 57 316 30 292 2.60e-40 146
MS.gene040564.t1 MTR_5g055690 33.212 274 170 6 23 289 3 270 5.51e-40 143
MS.gene040564.t1 MTR_1g062110 34.672 274 158 10 32 289 26 294 8.30e-40 144
MS.gene040564.t1 MTR_1g048940 31.013 316 196 11 68 371 45 350 9.63e-40 144
MS.gene040564.t1 MTR_7g063730 30.263 304 196 9 68 364 64 358 1.97e-39 144
MS.gene040564.t1 MTR_3g088565 32.841 271 152 10 68 323 3 258 1.98e-39 142
MS.gene040564.t1 MTR_8g075830 32.210 267 170 6 57 316 30 292 2.81e-39 143
MS.gene040564.t1 MTR_2g083000 31.488 289 177 6 68 351 33 305 2.91e-39 142
MS.gene040564.t1 MTR_8g074050 31.190 311 199 9 68 371 52 354 2.76e-38 140
MS.gene040564.t1 MTR_3g072820 31.788 302 187 7 60 351 32 324 6.40e-38 139
MS.gene040564.t1 MTR_1g070135 34.146 246 142 6 52 289 27 260 2.21e-37 136
MS.gene040564.t1 MTR_5g059140 28.846 312 195 7 44 341 18 316 4.03e-37 137
MS.gene040564.t1 MTR_7g062600 27.434 339 233 6 32 364 15 346 4.69e-37 137
MS.gene040564.t1 MTR_7g062550 27.988 343 225 8 32 364 24 354 5.62e-37 137
MS.gene040564.t1 MTR_0009s0480 33.333 267 165 8 32 292 11 270 1.47e-36 134
MS.gene040564.t1 MTR_1g102070 31.034 348 208 10 28 354 17 353 1.81e-36 136
MS.gene040564.t1 MTR_4g087130 30.351 313 182 8 68 354 26 328 2.42e-36 135
MS.gene040564.t1 MTR_3g117420 29.766 299 198 7 68 359 52 345 2.70e-36 135
MS.gene040564.t1 MTR_2g102570 30.120 332 175 11 63 365 47 350 2.93e-36 135
MS.gene040564.t1 MTR_5g048850 34.586 266 160 9 32 290 12 270 3.12e-36 133
MS.gene040564.t1 MTR_5g005570 32.700 263 149 8 68 317 37 284 9.37e-36 133
MS.gene040564.t1 MTR_4g074130 33.333 261 152 8 68 317 40 289 1.02e-35 133
MS.gene040564.t1 MTR_3g464530 32.955 264 145 9 68 317 34 279 1.13e-35 133
MS.gene040564.t1 MTR_6g464620 32.082 293 181 6 68 347 64 351 1.64e-35 134
MS.gene040564.t1 MTR_8g074070 30.351 313 199 10 68 371 52 354 1.71e-35 133
MS.gene040564.t1 MTR_0009s0050 32.743 226 140 5 148 366 25 245 2.62e-35 130
MS.gene040564.t1 MTR_0056s0160 34.112 214 133 3 156 364 16 226 2.63e-35 129
MS.gene040564.t1 MTR_0009s0050 32.743 226 140 5 148 366 25 245 2.79e-35 130
MS.gene040564.t1 MTR_1g081840 29.518 332 211 9 52 369 40 362 3.25e-35 133
MS.gene040564.t1 MTR_7g451860 31.923 260 158 7 68 317 41 291 5.59e-35 131
MS.gene040564.t1 MTR_7g047670 31.923 260 158 7 68 317 41 291 5.59e-35 131
MS.gene040564.t1 MTR_3g040410 32.302 291 169 10 67 344 5 280 5.63e-35 130
MS.gene040564.t1 MTR_1g011580 29.518 332 181 12 56 366 51 350 6.33e-35 132
MS.gene040564.t1 MTR_1g070085 31.274 259 163 4 120 370 9 260 9.91e-35 129
MS.gene040564.t1 MTR_7g062560 26.174 298 202 6 68 362 62 344 3.02e-34 130
MS.gene040564.t1 MTR_7g045650 30.686 277 179 7 32 301 24 294 4.10e-34 129
MS.gene040564.t1 MTR_1g070100 30.888 259 164 4 120 370 5 256 1.09e-33 126
MS.gene040564.t1 MTR_4g116010 30.097 309 191 9 50 344 26 323 1.39e-33 128
MS.gene040564.t1 MTR_8g074070 31.169 308 184 11 68 371 52 335 2.89e-33 127
MS.gene040564.t1 MTR_1g032240 37.500 200 95 3 172 370 7 177 2.29e-32 120
MS.gene040564.t1 MTR_6g092620 29.758 289 166 11 68 339 3 271 2.60e-32 123
MS.gene040564.t1 MTR_3g026150 28.617 311 208 9 61 365 53 355 3.53e-32 124
MS.gene040564.t1 MTR_3g117485 30.868 311 189 11 61 358 43 340 4.31e-32 124
MS.gene040564.t1 MTR_3g096500 29.206 315 203 6 69 369 67 375 1.65e-31 123
MS.gene040564.t1 MTR_2g070870 27.707 314 193 11 61 360 21 314 2.59e-31 121
MS.gene040564.t1 MTR_3g072810 28.369 282 174 7 86 351 52 321 3.47e-31 121
MS.gene040564.t1 MTR_4g123020 29.393 313 200 9 67 370 19 319 3.69e-31 120
MS.gene040564.t1 MTR_2g025120 31.004 229 140 6 69 289 5 223 6.78e-31 117
MS.gene040564.t1 MTR_3g088745 29.063 320 197 7 69 369 37 345 1.22e-30 120
MS.gene040564.t1 MTR_0009s0050 35.119 168 101 4 202 366 1 163 1.26e-30 115
MS.gene040564.t1 MTR_2g019370 28.736 348 170 15 61 371 21 327 2.41e-30 119
MS.gene040564.t1 MTR_2g072910 30.112 269 174 6 32 292 16 278 4.46e-30 117
MS.gene040564.t1 MTR_3g083370 33.047 233 132 8 68 289 4 223 5.14e-30 115
MS.gene040564.t1 MTR_2g437380 29.323 266 178 4 112 371 1 262 5.64e-30 116
MS.gene040564.t1 MTR_8g033380 29.866 298 194 6 68 354 54 347 1.10e-29 117
MS.gene040564.t1 MTR_8g461330 27.215 316 189 11 68 361 27 323 4.34e-29 115
MS.gene040564.t1 MTR_1g086550 30.861 337 176 14 68 371 20 332 1.09e-28 114
MS.gene040564.t1 MTR_3g464530 31.356 236 131 8 68 289 34 252 7.73e-28 110
MS.gene040564.t1 MTR_7g077670 29.167 312 184 11 61 354 3 295 1.90e-27 110
MS.gene040564.t1 MTR_0009s0400 36.986 146 88 2 227 371 2 144 3.38e-27 105
MS.gene040564.t1 MTR_8g093930 28.076 317 204 6 68 369 47 354 2.64e-26 108
MS.gene040564.t1 MTR_3g117485 30.000 270 167 8 100 358 10 268 3.65e-26 106
MS.gene040564.t1 MTR_8g008960 56.757 74 32 0 298 371 29 102 9.60e-26 100
MS.gene040564.t1 MTR_4g132770 43.636 110 58 2 229 337 32 138 1.11e-25 101
MS.gene040564.t1 MTR_1g070110 27.881 269 151 6 109 370 1 233 6.28e-24 99.4
MS.gene040564.t1 MTR_5g025050 27.365 296 186 11 67 353 4 279 7.77e-24 100
MS.gene040564.t1 MTR_2g033270 29.448 326 203 14 58 370 5 316 8.00e-24 100
MS.gene040564.t1 MTR_8g093980 24.779 339 231 6 44 369 38 365 8.79e-24 101
MS.gene040564.t1 MTR_8g030880 28.477 302 188 10 69 354 6 295 1.36e-23 100
MS.gene040564.t1 MTR_5g025090 25.705 319 202 10 65 371 2 297 2.68e-23 99.0
MS.gene040564.t1 MTR_3g026150 29.787 235 154 8 61 289 53 282 5.40e-22 95.1
MS.gene040564.t1 MTR_3g026150 27.237 257 176 7 115 365 1 252 8.46e-22 94.0
MS.gene040564.t1 MTR_6g088665 26.349 315 198 9 67 356 20 325 2.14e-21 94.4
MS.gene040564.t1 MTR_4g099390 51.190 84 39 1 290 371 1 84 7.74e-21 86.3
MS.gene040564.t1 MTR_8g102600 25.159 314 203 8 63 353 7 311 2.70e-20 90.9
MS.gene040564.t1 MTR_6g088665 26.266 316 198 10 67 356 20 326 2.82e-20 90.9
MS.gene040564.t1 MTR_4g096840 26.282 312 193 11 68 360 29 322 3.04e-20 90.9
MS.gene040564.t1 MTR_5g027230 27.333 300 183 12 64 351 2 278 5.43e-20 89.7
MS.gene040564.t1 MTR_1g027290 26.646 319 210 9 68 371 29 338 1.47e-19 89.0
MS.gene040564.t1 MTR_4g115990 28.214 280 175 10 68 344 46 302 1.70e-19 88.6
MS.gene040564.t1 MTR_3g108520 22.930 314 224 9 68 369 7 314 1.28e-16 80.1
MS.gene040564.t1 MTR_7g084360 37.647 170 56 4 179 344 7 130 2.49e-16 75.5
MS.gene040564.t1 MTR_1g032230 33.813 139 69 2 18 155 16 132 3.82e-16 78.2
MS.gene040564.t1 MTR_2g068850 32.903 155 93 6 32 182 21 168 6.95e-16 76.3
MS.gene040564.t1 MTR_3g040440 40.217 92 49 2 223 310 1 90 1.65e-15 75.9
MS.gene040564.t1 MTR_4g100600 24.834 302 200 9 68 352 9 300 2.51e-15 76.6
MS.gene040564.t1 MTR_8g102600 28.571 182 117 5 181 353 84 261 4.52e-15 75.1
MS.gene040564.t1 MTR_4g011720 22.903 310 201 11 68 358 9 299 6.43e-14 72.0
MS.gene040564.t1 MTR_4g021380 22.222 306 214 11 68 357 7 304 1.18e-13 71.6
MS.gene040564.t1 MTR_4g021360 23.179 302 211 9 68 356 7 300 1.42e-13 71.2
MS.gene040564.t1 MTR_0009s0410 34.951 103 63 2 32 134 11 109 9.70e-12 63.2
MS.gene040564.t1 MTR_2g069130 40.217 92 49 2 72 161 12 99 3.13e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040564.t1 AT1G06620 60.734 354 139 0 18 371 12 365 3.26e-160 454
MS.gene040564.t1 AT1G06650 58.496 359 144 3 18 371 11 369 7.36e-151 430
MS.gene040564.t1 AT2G30830 56.704 358 150 4 16 371 4 358 6.65e-147 420
MS.gene040564.t1 AT5G59540 55.899 356 148 4 22 371 14 366 6.20e-146 417
MS.gene040564.t1 AT2G30840 57.618 361 142 5 18 371 6 362 3.81e-145 416
MS.gene040564.t1 AT5G59530 56.583 357 151 4 18 371 9 364 3.59e-144 413
MS.gene040564.t1 AT1G06640 56.131 367 140 4 18 371 11 369 2.85e-142 408
MS.gene040564.t1 AT1G03410 56.765 340 143 3 16 351 3 342 2.67e-140 403
MS.gene040564.t1 AT1G03410 56.765 340 143 3 16 351 40 379 1.09e-139 403
MS.gene040564.t1 AT2G30840 56.510 361 140 6 18 371 6 356 4.83e-139 400
MS.gene040564.t1 AT1G04350 54.167 360 153 5 18 371 7 360 2.92e-137 395
MS.gene040564.t1 AT1G06645 56.233 361 146 6 18 371 24 379 1.71e-136 394
MS.gene040564.t1 AT3G61400 53.056 360 159 5 17 367 9 367 8.25e-136 392
MS.gene040564.t1 AT5G43440 52.514 358 163 4 19 371 10 365 5.58e-134 387
MS.gene040564.t1 AT2G25450 52.925 359 163 5 16 371 4 359 1.65e-133 386
MS.gene040564.t1 AT5G43450 51.811 359 163 3 18 371 9 362 1.05e-131 381
MS.gene040564.t1 AT1G03400 51.955 358 161 4 16 371 3 351 1.70e-129 375
MS.gene040564.t1 AT1G04380 49.036 363 165 4 9 371 3 345 8.74e-129 373
MS.gene040564.t1 AT1G03400 48.187 386 161 5 16 371 3 379 6.33e-123 360
MS.gene040564.t1 AT1G06620 60.886 271 106 0 18 288 12 282 4.73e-121 351
MS.gene040564.t1 AT2G30840 57.401 277 109 3 18 288 6 279 7.16e-111 326
MS.gene040564.t1 AT1G06650 57.246 276 114 2 18 289 11 286 6.44e-110 324
MS.gene040564.t1 AT5G59540 55.839 274 112 4 22 289 14 284 1.65e-107 317
MS.gene040564.t1 AT1G06640 54.483 290 112 3 18 295 11 292 3.06e-105 312
MS.gene040564.t1 AT1G06640 55.282 284 107 3 18 289 11 286 5.00e-104 308
MS.gene040564.t1 AT3G61400 53.737 281 121 4 17 289 9 288 1.63e-103 307
MS.gene040564.t1 AT5G43440 52.500 280 126 4 19 293 10 287 7.50e-102 303
MS.gene040564.t1 AT5G43450 51.786 280 131 2 18 295 9 286 3.51e-101 301
MS.gene040564.t1 AT1G04380 47.687 281 127 4 9 289 3 263 3.45e-92 277
MS.gene040564.t1 AT3G13610 36.676 349 199 6 32 371 26 361 1.42e-70 225
MS.gene040564.t1 AT1G55290 36.103 349 197 9 32 369 25 358 4.28e-66 213
MS.gene040564.t1 AT3G12900 35.777 341 208 7 32 369 21 353 5.20e-62 203
MS.gene040564.t1 AT4G10500 34.516 310 188 6 68 370 44 345 8.25e-59 194
MS.gene040564.t1 AT4G10490 33.762 311 190 6 68 370 42 344 1.27e-58 194
MS.gene040564.t1 AT2G36690 32.764 351 222 6 30 371 18 363 4.88e-57 190
MS.gene040564.t1 AT2G36690 32.764 351 222 6 30 371 18 363 4.88e-57 190
MS.gene040564.t1 AT5G24530 33.227 313 186 4 68 369 38 338 1.65e-55 186
MS.gene040564.t1 AT2G38240 32.951 349 213 8 25 362 4 342 6.13e-55 184
MS.gene040564.t1 AT5G05600 30.812 357 227 7 23 367 17 365 4.15e-52 177
MS.gene040564.t1 AT4G25300 33.832 334 207 9 45 371 30 356 2.34e-51 175
MS.gene040564.t1 AT1G17020 33.013 312 195 8 68 371 53 358 4.22e-50 172
MS.gene040564.t1 AT3G11180 31.884 345 213 8 33 364 56 391 1.22e-49 172
MS.gene040564.t1 AT3G11180 31.143 350 219 8 33 369 56 396 1.90e-49 171
MS.gene040564.t1 AT4G25310 35.161 310 187 8 63 366 47 348 3.30e-49 169
MS.gene040564.t1 AT2G44800 31.672 341 219 9 22 355 5 338 5.53e-48 166
MS.gene040564.t1 AT1G78550 32.372 312 201 6 60 366 45 351 1.03e-47 166
MS.gene040564.t1 AT3G19010 34.797 296 167 7 68 344 28 316 5.93e-46 160
MS.gene040564.t1 AT3G19010 34.797 296 167 7 68 344 28 316 5.93e-46 160
MS.gene040564.t1 AT3G19000 30.861 337 205 8 35 352 2 329 8.64e-46 160
MS.gene040564.t1 AT1G17010 29.412 340 215 9 45 371 31 358 1.08e-45 160
MS.gene040564.t1 AT3G55970 33.444 302 187 7 68 359 52 349 1.98e-45 160
MS.gene040564.t1 AT4G16330 32.131 305 181 8 68 362 67 355 2.14e-45 159
MS.gene040564.t1 AT5G12270 30.618 356 219 13 30 371 18 359 1.16e-44 157
MS.gene040564.t1 AT4G22880 31.965 341 206 11 33 354 7 340 1.78e-44 157
MS.gene040564.t1 AT4G22880 31.965 341 206 11 33 354 7 340 1.78e-44 157
MS.gene040564.t1 AT4G22880 31.965 341 206 11 33 354 7 340 1.78e-44 157
MS.gene040564.t1 AT3G60290 32.722 327 206 9 36 355 19 338 2.54e-44 157
MS.gene040564.t1 AT3G21420 31.714 350 219 9 33 369 17 359 4.47e-43 154
MS.gene040564.t1 AT4G25420 30.794 315 199 5 68 369 61 369 5.07e-43 154
MS.gene040564.t1 AT3G51240 35.938 256 155 5 68 316 38 291 1.05e-42 152
MS.gene040564.t1 AT5G08640 32.192 292 181 7 68 351 43 325 1.38e-42 151
MS.gene040564.t1 AT5G08640 32.192 292 181 7 68 351 43 325 1.38e-42 151
MS.gene040564.t1 AT1G77330 32.107 299 174 10 68 352 3 286 7.56e-41 146
MS.gene040564.t1 AT1G05010 34.351 262 153 7 68 320 4 255 1.07e-40 146
MS.gene040564.t1 AT3G19010 33.566 286 154 8 68 344 28 286 1.24e-40 146
MS.gene040564.t1 AT1G78550 31.136 273 179 4 99 366 5 273 1.39e-40 144
MS.gene040564.t1 AT4G21200 33.206 262 146 9 68 316 42 287 1.32e-39 144
MS.gene040564.t1 AT1G12010 30.405 296 186 8 68 357 7 288 9.69e-39 141
MS.gene040564.t1 AT1G62380 31.208 298 181 10 68 357 7 288 2.03e-38 140
MS.gene040564.t1 AT5G20400 32.209 326 200 11 44 358 19 334 3.13e-38 140
MS.gene040564.t1 AT5G07480 30.031 323 206 8 44 355 24 337 4.19e-38 140
MS.gene040564.t1 AT5G20550 31.402 328 207 10 44 359 19 340 7.78e-37 136
MS.gene040564.t1 AT5G05600 31.227 269 168 6 33 289 27 290 1.32e-36 134
MS.gene040564.t1 AT1G60980 29.355 310 198 5 68 361 57 361 7.60e-36 134
MS.gene040564.t1 AT4G16330 33.803 213 126 4 156 362 46 249 1.31e-35 131
MS.gene040564.t1 AT4G25300 38.342 193 114 4 181 371 73 262 1.89e-35 130
MS.gene040564.t1 AT1G15550 30.189 318 179 10 55 352 44 338 3.77e-35 132
MS.gene040564.t1 AT1G80330 30.030 333 189 11 58 366 39 351 5.37e-35 132
MS.gene040564.t1 AT3G19000 29.078 282 175 7 35 297 2 277 8.46e-35 129
MS.gene040564.t1 AT1G49390 30.341 323 209 8 44 356 19 335 2.41e-34 130
MS.gene040564.t1 AT5G63590 32.895 304 176 11 64 351 6 297 2.79e-34 129
MS.gene040564.t1 AT4G25310 30.421 309 175 8 63 366 47 320 1.86e-33 127
MS.gene040564.t1 AT5G07200 27.778 342 224 7 49 371 35 372 2.84e-33 127
MS.gene040564.t1 AT3G55970 34.483 232 141 6 68 289 52 282 7.12e-33 125
MS.gene040564.t1 AT1G50960 29.537 281 181 7 59 329 28 301 1.00e-32 125
MS.gene040564.t1 AT5G54000 29.667 300 198 8 68 359 46 340 1.86e-32 125
MS.gene040564.t1 AT4G25420 32.035 231 141 4 68 285 61 288 3.01e-32 123
MS.gene040564.t1 AT5G51810 28.859 298 193 4 68 354 63 352 4.98e-32 124
MS.gene040564.t1 AT3G19010 33.197 244 140 6 68 292 28 267 5.58e-32 122
MS.gene040564.t1 AT5G63595 29.889 271 166 5 49 318 8 255 1.25e-30 118
MS.gene040564.t1 AT2G19590 28.727 275 176 8 68 335 11 272 6.11e-30 117
MS.gene040564.t1 AT3G51240 40.278 144 84 1 175 316 64 207 8.27e-30 116
MS.gene040564.t1 AT1G78440 28.302 318 195 11 67 367 17 318 2.30e-29 116
MS.gene040564.t1 AT1G80340 26.126 333 207 10 42 353 18 332 6.60e-29 115
MS.gene040564.t1 AT5G63600 28.041 296 184 9 68 352 33 310 1.90e-28 113
MS.gene040564.t1 AT1G47990 28.571 322 175 11 68 361 15 309 2.96e-27 110
MS.gene040564.t1 AT5G63600 27.946 297 184 10 68 352 33 311 3.14e-27 110
MS.gene040564.t1 AT5G58660 26.736 288 154 8 68 317 34 302 5.19e-27 110
MS.gene040564.t1 AT1G30040 28.395 324 192 13 64 371 27 326 7.06e-27 109
MS.gene040564.t1 AT1G49390 30.153 262 169 7 103 356 1 256 1.56e-25 104
MS.gene040564.t1 AT5G54000 28.679 265 176 8 103 359 1 260 4.23e-25 103
MS.gene040564.t1 AT5G51810 29.661 236 150 3 68 292 63 293 4.24e-25 103
MS.gene040564.t1 AT4G21690 29.221 308 186 11 63 353 42 334 3.90e-24 102
MS.gene040564.t1 AT5G43935 25.658 304 168 11 68 352 19 283 6.05e-24 100
MS.gene040564.t1 AT4G23340 28.520 277 171 9 93 354 30 294 1.21e-23 100
MS.gene040564.t1 AT5G63580 30.736 231 142 7 68 289 19 240 3.75e-23 97.1
MS.gene040564.t1 AT2G34555 27.476 313 186 12 67 360 26 316 4.66e-23 99.0
MS.gene040564.t1 AT5G63580 31.004 229 140 7 68 287 19 238 4.68e-23 97.1
MS.gene040564.t1 AT1G02400 27.885 312 203 9 62 361 18 319 7.74e-23 98.2
MS.gene040564.t1 AT5G51310 29.151 271 160 9 68 317 5 264 1.28e-22 97.4
MS.gene040564.t1 AT2G19590 27.572 243 158 7 100 335 26 257 1.57e-22 96.7
MS.gene040564.t1 AT1G44090 26.752 314 214 6 68 369 63 372 3.62e-22 97.1
MS.gene040564.t1 AT5G07480 32.418 182 112 5 181 355 51 228 5.42e-22 94.0
MS.gene040564.t1 AT3G47190 26.459 257 149 8 68 302 32 270 5.30e-21 93.2
MS.gene040564.t1 AT1G14130 27.148 291 177 10 67 344 8 276 7.68e-21 92.0
MS.gene040564.t1 AT5G58660 25.769 260 136 8 68 289 34 274 1.24e-20 90.9
MS.gene040564.t1 AT1G14120 29.008 262 158 10 67 317 7 251 1.38e-20 91.7
MS.gene040564.t1 AT1G14120 29.008 262 158 10 67 317 7 251 1.38e-20 91.7
MS.gene040564.t1 AT1G14120 29.008 262 158 10 67 317 7 251 1.38e-20 91.7
MS.gene040564.t1 AT4G23340 30.726 179 113 5 184 354 1 176 1.87e-19 86.3
MS.gene040564.t1 AT2G06960 36.232 138 71 3 221 358 25 145 2.59e-19 84.0
MS.gene040564.t1 AT3G46490 24.841 314 208 7 67 356 11 320 1.27e-18 86.3
MS.gene040564.t1 AT3G46490 25.000 264 174 5 67 306 11 274 7.39e-16 77.8
MS.gene040564.t1 AT1G30040 26.033 242 148 11 64 289 27 253 2.59e-15 75.9
MS.gene040564.t1 AT3G46500 26.415 318 198 11 61 356 10 313 2.84e-15 76.3
MS.gene040564.t1 AT4G16765 35.556 135 75 4 223 352 63 190 9.12e-14 70.1
MS.gene040564.t1 AT4G16765 35.833 120 68 3 238 352 121 236 2.43e-13 69.7
MS.gene040564.t1 AT4G16765 35.833 120 68 3 238 352 121 236 2.43e-13 69.7
MS.gene040564.t1 AT4G16765 35.833 120 68 3 238 352 121 236 2.43e-13 69.7
MS.gene040564.t1 AT3G46500 34.426 122 71 3 240 356 60 177 5.23e-13 67.4
MS.gene040564.t1 AT3G46480 35.200 125 72 3 240 359 156 276 9.27e-13 68.6
MS.gene040564.t1 AT4G16765 37.838 111 60 3 238 343 121 227 1.55e-12 67.0
MS.gene040564.t1 AT3G46500 34.426 122 71 3 240 356 122 239 1.58e-12 67.4
MS.gene040564.t1 AT3G46500 34.426 122 71 3 240 356 122 239 1.58e-12 67.4
MS.gene040564.t1 AT4G22870 33.981 103 63 3 258 358 2 101 1.32e-11 61.6

Find 86 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGTTCTTGCCTTGTATT+TGG 0.182635 2.3:-26863752 None:intergenic
AGAGCAAAAGAAAAGCTTTA+TGG 0.189457 2.3:+26865735 MS.gene040564:CDS
TCTGATAATAATTCTGTTAT+AGG 0.196985 2.3:-26865759 None:intergenic
ATAATTCACCAGCACTTAAT+TGG 0.225616 2.3:+26863966 MS.gene040564:CDS
GTGGTTCCCATTGTTAAATC+TGG 0.266613 2.3:-26864793 None:intergenic
TTCTTGTAGGGATATACTTA+TGG 0.267473 2.3:+26864624 MS.gene040564:intron
TACTGGCAAATCTTCTAGTT+TGG 0.270653 2.3:-26864026 None:intergenic
ATCAGGTGGGTGATGAAATA+AGG 0.285101 2.3:-26863651 None:intergenic
GTGGCAATTCCATATTTATC+AGG 0.293337 2.3:-26863668 None:intergenic
GTTATAGACTTAGCAAATAT+TGG 0.306010 2.3:+26863722 MS.gene040564:CDS
CCCATTGTTAAATCTGGTTC+AGG 0.324070 2.3:-26864787 None:intergenic
ACTGGCAAATCTTCTAGTTT+GGG 0.330376 2.3:-26864025 None:intergenic
TCCAAGTCCTTCAAATGGTT+TGG 0.334182 2.3:-26864718 None:intergenic
CATCACCCACCTGATAAATA+TGG 0.338981 2.3:+26863659 MS.gene040564:CDS
AGGGATATACTTATGGAATA+TGG 0.343303 2.3:+26864631 MS.gene040564:intron
AAGCATGCAACAGATATTCT+TGG 0.361845 2.3:-26865696 None:intergenic
ACAGTGGTTTCTTTGTATCT+TGG 0.373408 2.3:-26865792 None:intergenic
GAACTTGAAGGCCACCAATA+TGG 0.382940 2.3:-26864858 None:intergenic
AAAACTAACATCAGAATGTT+TGG 0.384264 2.3:-26864815 None:intergenic
TCCAAACCATTTGAAGGACT+TGG 0.385772 2.3:+26864717 MS.gene040564:CDS
TTCTTTCAAGTGGTTAATCA+TGG 0.390468 2.3:+26863809 MS.gene040564:CDS
ATAGCCTACTTGTATGCAAA+AGG 0.392224 2.3:+26865825 MS.gene040564:CDS
TTGTGTGCTGGTTGAATTTG+TGG 0.393817 2.3:-26863687 None:intergenic
TTGTATGCAAAAGGGCTTGA+TGG 0.397445 2.3:+26865834 MS.gene040564:CDS
TGTGAGGGGAATATGATAAT+TGG 0.401343 2.3:+26864745 MS.gene040564:CDS
ACTTCAAATTCAACTCTGAT+AGG 0.413547 2.3:+26863549 MS.gene040564:CDS
GAGGCTCTTGTTGTTAATAT+CGG 0.417974 2.3:+26864919 MS.gene040564:CDS
GAAACAAAAGCTGGTGTTAA+GGG 0.418359 2.3:+26863596 MS.gene040564:CDS
ATATTTGCTAAGTCTATAAC+AGG 0.421815 2.3:-26863719 None:intergenic
GTGGTTTCTTTGTATCTTGG+AGG 0.425809 2.3:-26865789 None:intergenic
CCTGAACCAGATTTAACAAT+GGG 0.452342 2.3:+26864787 MS.gene040564:CDS
GTGCTTCTCCAAGACCATAT+TGG 0.458917 2.3:+26864844 MS.gene040564:CDS
TGAAACAAAAGCTGGTGTTA+AGG 0.463989 2.3:+26863595 MS.gene040564:CDS
ATTGCATCCAAACCATTTGA+AGG 0.465821 2.3:+26864711 MS.gene040564:CDS
ACTGCTACAGATGAAGTTGA+AGG 0.466404 2.3:+26863524 MS.gene040564:CDS
GTTAAGGGCCTTGTTGATCA+AGG 0.478281 2.3:+26863611 MS.gene040564:CDS
AACAATCCAAGTCCTTCAAA+TGG 0.482362 2.3:-26864723 None:intergenic
GGAACACGTCTAATGAAACT+TGG 0.489800 2.3:+26864652 MS.gene040564:CDS
TGTCTTGGTGAAGAACTTGA+AGG 0.500847 2.3:-26864870 None:intergenic
GAAGGCCACCAATATGGTCT+TGG 0.505190 2.3:-26864852 None:intergenic
TGGTTTCTTTGTATCTTGGA+GGG 0.505650 2.3:-26865788 None:intergenic
TAGCCTACTTGTATGCAAAA+GGG 0.512449 2.3:+26865826 MS.gene040564:CDS
ACAACAAGAGCCTCGGGTAC+CGG 0.518536 2.3:-26864910 None:intergenic
GAACATAGAGTACTGGCAAA+TGG 0.522198 2.3:+26865666 MS.gene040564:CDS
AAAGCAAGCATCTGAGACAT+GGG 0.525014 2.3:+26863784 MS.gene040564:CDS
AGAGTACTGGCAAATGGCAT+TGG 0.528477 2.3:+26865672 MS.gene040564:CDS
GAGTGTTGAACATAGAGTAC+TGG 0.528504 2.3:+26865659 MS.gene040564:CDS
AGAACTCACCTGCATACTAC+TGG 0.532177 2.3:-26864043 None:intergenic
GACATGGGGTTTCTTTCAAG+TGG 0.533789 2.3:+26863799 MS.gene040564:CDS
AATTCCTTTGAATGTTCTTG+AGG 0.534752 2.3:+26863832 MS.gene040564:CDS
TAATATCGGTGATCTTCTGC+AGG 0.536414 2.3:+26864933 MS.gene040564:CDS
GTATCCCTCCAATTAAGTGC+TGG 0.539300 2.3:-26863974 None:intergenic
AAGATTTGCCAGTAGTATGC+AGG 0.541922 2.3:+26864035 MS.gene040564:CDS
AGGAATAATGTGTTGTGTGC+TGG 0.542487 2.3:-26863699 None:intergenic
AAGTTCTTCACCAAGACAAG+TGG 0.543727 2.3:+26864875 MS.gene040564:CDS
GCAATTCCATATTTATCAGG+TGG 0.545391 2.3:-26863665 None:intergenic
TAAAGCAAGCATCTGAGACA+TGG 0.546038 2.3:+26863783 MS.gene040564:CDS
AAGGACTTGGATTGTTGTGA+GGG 0.551518 2.3:+26864730 MS.gene040564:CDS
ATTCACCAGCACTTAATTGG+AGG 0.552924 2.3:+26863969 MS.gene040564:CDS
GGTGGGTGATGAAATAAGGT+TGG 0.553153 2.3:-26863647 None:intergenic
AAATCTGGTTCAGGACAAGC+AGG 0.553285 2.3:-26864778 None:intergenic
TTCACCAGCACTTAATTGGA+GGG 0.567190 2.3:+26863970 MS.gene040564:CDS
GTACATCGATCCACTTGTCT+TGG 0.567378 2.3:-26864885 None:intergenic
TAGAGATCGAACAAGGCCAT+TGG 0.568280 2.3:+26863919 MS.gene040564:CDS
ATATCCTCAAGAACATTCAA+AGG 0.568458 2.3:-26863836 None:intergenic
CTGGCAAATCTTCTAGTTTG+GGG 0.572765 2.3:-26864024 None:intergenic
GATATTAACAACAAGAGCCT+CGG 0.577587 2.3:-26864917 None:intergenic
GCATTTGATGAAACAAAAGC+TGG 0.578863 2.3:+26863587 MS.gene040564:CDS
GTTCTTGAGGATATGAAAGA+TGG 0.581083 2.3:+26863845 MS.gene040564:CDS
CAATTCCATATTTATCAGGT+GGG 0.582719 2.3:-26863664 None:intergenic
ATATTAACAACAAGAGCCTC+GGG 0.583768 2.3:-26864916 None:intergenic
TCCTGAACCAGATTTAACAA+TGG 0.591414 2.3:+26864786 MS.gene040564:CDS
ACTAACATCAGAATGTTTGG+TGG 0.592456 2.3:-26864812 None:intergenic
CTTCTCCAAGACCATATTGG+TGG 0.609639 2.3:+26864847 MS.gene040564:CDS
GGCTATAAAATCAGCAACAG+TGG 0.612431 2.3:-26865808 None:intergenic
TGAGAATACCTTGATCAACA+AGG 0.613971 2.3:-26863619 None:intergenic
TTGGCAAAGATCCAAATACA+AGG 0.617367 2.3:+26863741 MS.gene040564:CDS
CAAGTGGATCGATGTACCAC+CGG 0.625765 2.3:+26864891 MS.gene040564:CDS
TGGCAAATCTTCTAGTTTGG+GGG 0.628895 2.3:-26864023 None:intergenic
AAATTGCTATTATAAACCAA+TGG 0.628916 2.3:-26863935 None:intergenic
GAAGGACTTGGATTGTTGTG+AGG 0.634606 2.3:+26864729 MS.gene040564:CDS
CGATGTACCACCGGTACCCG+AGG 0.639699 2.3:+26864900 MS.gene040564:CDS
TGTATACTAGAGATCGAACA+AGG 0.655001 2.3:+26863912 MS.gene040564:CDS
AGGACTTGGATTGTTGTGAG+GGG 0.665627 2.3:+26864731 MS.gene040564:CDS
ACAAGAGCCTCGGGTACCGG+TGG 0.668974 2.3:-26864907 None:intergenic
AAGCAAGCATCTGAGACATG+GGG 0.705652 2.3:+26863785 MS.gene040564:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATTGTTATAAAAATT+TGG - chr2.3:26864242-26864261 None:intergenic 10.0%
!! AAATTGAAACAAACTATTAT+TGG - chr2.3:26864217-26864236 None:intergenic 15.0%
!! ATTAAGCAACTAATTATAAA+AGG + chr2.3:26864533-26864552 MS.gene040564:intron 15.0%
!! TTTCTATTAATTAGCAAAAT+AGG + chr2.3:26864158-26864177 MS.gene040564:intron 15.0%
!!! ATTTTTATAACAATTTTGTC+CGG + chr2.3:26864243-26864262 MS.gene040564:intron 15.0%
!! AACATGATATTCCTATTATA+GGG + chr2.3:26864572-26864591 MS.gene040564:intron 20.0%
!! ATTATATTCTTGTGATGATA+TGG + chr2.3:26864416-26864435 MS.gene040564:intron 20.0%
!! TAAATAACCTTAACATGAAT+TGG + chr2.3:26865088-26865107 MS.gene040564:intron 20.0%
!! TAAATTAAGTTCCCTATAAT+AGG - chr2.3:26864586-26864605 None:intergenic 20.0%
!! TAACATGATATTCCTATTAT+AGG + chr2.3:26864571-26864590 MS.gene040564:intron 20.0%
!! TATATAACACTAACACATAT+AGG + chr2.3:26864364-26864383 MS.gene040564:intron 20.0%
!! TCTGATAATAATTCTGTTAT+AGG - chr2.3:26865762-26865781 None:intergenic 20.0%
!!! AAATTGCTATTATAAACCAA+TGG - chr2.3:26863938-26863957 None:intergenic 20.0%
!!! TTTTTATAACAATTTTGTCC+GGG + chr2.3:26864244-26864263 MS.gene040564:intron 20.0%
! AAAACTAACATCAGAATGTT+TGG - chr2.3:26864818-26864837 None:intergenic 25.0%
! CAAGTTCTCTATTTACTATT+AGG + chr2.3:26864956-26864975 MS.gene040564:intron 25.0%
! GTTATAGACTTAGCAAATAT+TGG + chr2.3:26863722-26863741 MS.gene040564:CDS 25.0%
! TAACACCAAAAAGATGTATT+TGG + chr2.3:26864320-26864339 MS.gene040564:intron 25.0%
!! ATATTTGCTAAGTCTATAAC+AGG - chr2.3:26863722-26863741 None:intergenic 25.0%
!! TATATACTGCCTCAAATTTT+AGG + chr2.3:26864074-26864093 MS.gene040564:intron 25.0%
AATTCCTTTGAATGTTCTTG+AGG + chr2.3:26863832-26863851 MS.gene040564:CDS 30.0%
ACTAATTATAAAAGGCTAGG+AGG + chr2.3:26864541-26864560 MS.gene040564:intron 30.0%
ACTTCAAATTCAACTCTGAT+AGG + chr2.3:26863549-26863568 MS.gene040564:CDS 30.0%
AGAGCAAAAGAAAAGCTTTA+TGG + chr2.3:26865735-26865754 MS.gene040564:CDS 30.0%
AGCCCTTAAGAATATATTGA+CGG - chr2.3:26865318-26865337 None:intergenic 30.0%
AGGGAACTTAATTTATTGCT+TGG + chr2.3:26864591-26864610 MS.gene040564:intron 30.0%
AGGGATATACTTATGGAATA+TGG + chr2.3:26864631-26864650 MS.gene040564:intron 30.0%
ATAAAGGAAAATGATCAACC+CGG - chr2.3:26864265-26864284 None:intergenic 30.0%
ATAAGTTCTTGCCTTGTATT+TGG - chr2.3:26863755-26863774 None:intergenic 30.0%
ATAATTCACCAGCACTTAAT+TGG + chr2.3:26863966-26863985 MS.gene040564:CDS 30.0%
ATATCCTCAAGAACATTCAA+AGG - chr2.3:26863839-26863858 None:intergenic 30.0%
CAATTCCATATTTATCAGGT+GGG - chr2.3:26863667-26863686 None:intergenic 30.0%
GACCGTCAATATATTCTTAA+GGG + chr2.3:26865313-26865332 MS.gene040564:intron 30.0%
GAGCTTAGTAAAAAGACTTA+AGG + chr2.3:26865440-26865459 MS.gene040564:intron 30.0%
GAGTACAGTATTAGAAACTA+GGG - chr2.3:26865567-26865586 None:intergenic 30.0%
GCAACTAATTATAAAAGGCT+AGG + chr2.3:26864538-26864557 MS.gene040564:intron 30.0%
GGTGATTTCATATTCTTGTA+GGG + chr2.3:26864612-26864631 MS.gene040564:intron 30.0%
TGAAAGTGACCTAAAATTTG+AGG - chr2.3:26864086-26864105 None:intergenic 30.0%
TGAGTACAGTATTAGAAACT+AGG - chr2.3:26865568-26865587 None:intergenic 30.0%
TGGTGATTTCATATTCTTGT+AGG + chr2.3:26864611-26864630 MS.gene040564:intron 30.0%
TTCTTGTAGGGATATACTTA+TGG + chr2.3:26864624-26864643 MS.gene040564:intron 30.0%
! TTCTTTCAAGTGGTTAATCA+TGG + chr2.3:26863809-26863828 MS.gene040564:CDS 30.0%
AACAATCCAAGTCCTTCAAA+TGG - chr2.3:26864726-26864745 None:intergenic 35.0%
AAGCATGCAACAGATATTCT+TGG - chr2.3:26865699-26865718 None:intergenic 35.0%
ACAGTGGTTTCTTTGTATCT+TGG - chr2.3:26865795-26865814 None:intergenic 35.0%
ACTAACATCAGAATGTTTGG+TGG - chr2.3:26864815-26864834 None:intergenic 35.0%
AGCCCTTAGGAATATATTGA+CGG - chr2.3:26865115-26865134 None:intergenic 35.0%
ATAGCCTACTTGTATGCAAA+AGG + chr2.3:26865825-26865844 MS.gene040564:CDS 35.0%
ATATAGATACATGTAGCCGT+AGG - chr2.3:26864349-26864368 None:intergenic 35.0%
ATATTAACAACAAGAGCCTC+GGG - chr2.3:26864919-26864938 None:intergenic 35.0%
ATTCATGGTGTAGGTCATAA+AGG - chr2.3:26864281-26864300 None:intergenic 35.0%
ATTGCATCCAAACCATTTGA+AGG + chr2.3:26864711-26864730 MS.gene040564:CDS 35.0%
CCAAACTCTACTAATGAACA+TGG + chr2.3:26864480-26864499 MS.gene040564:intron 35.0%
CCATGTTCATTAGTAGAGTT+TGG - chr2.3:26864483-26864502 None:intergenic 35.0%
CCTGAACCAGATTTAACAAT+GGG + chr2.3:26864787-26864806 MS.gene040564:CDS 35.0%
GACCGTCAATATATTCCTAA+GGG + chr2.3:26865110-26865129 MS.gene040564:intron 35.0%
GATATTAACAACAAGAGCCT+CGG - chr2.3:26864920-26864939 None:intergenic 35.0%
GCAATTCCATATTTATCAGG+TGG - chr2.3:26863668-26863687 None:intergenic 35.0%
GCATTTGATGAAACAAAAGC+TGG + chr2.3:26863587-26863606 MS.gene040564:CDS 35.0%
GGACCGTCAATATATTCTTA+AGG + chr2.3:26865312-26865331 MS.gene040564:intron 35.0%
GTGGCAATTCCATATTTATC+AGG - chr2.3:26863671-26863690 None:intergenic 35.0%
GTTCTTGAGGATATGAAAGA+TGG + chr2.3:26863845-26863864 MS.gene040564:CDS 35.0%
TAGCCTACTTGTATGCAAAA+GGG + chr2.3:26865826-26865845 MS.gene040564:CDS 35.0%
TCCTGAACCAGATTTAACAA+TGG + chr2.3:26864786-26864805 MS.gene040564:CDS 35.0%
TGAGAATACCTTGATCAACA+AGG - chr2.3:26863622-26863641 None:intergenic 35.0%
TGGTTTCTTTGTATCTTGGA+GGG - chr2.3:26865791-26865810 None:intergenic 35.0%
TGTATACTAGAGATCGAACA+AGG + chr2.3:26863912-26863931 MS.gene040564:CDS 35.0%
TGTGAGGGGAATATGATAAT+TGG + chr2.3:26864745-26864764 MS.gene040564:CDS 35.0%
TTGGCAAAGATCCAAATACA+AGG + chr2.3:26863741-26863760 MS.gene040564:CDS 35.0%
! GAAACAAAAGCTGGTGTTAA+GGG + chr2.3:26863596-26863615 MS.gene040564:CDS 35.0%
! GGACACCAAATACATCTTTT+TGG - chr2.3:26864328-26864347 None:intergenic 35.0%
! TACTGGCAAATCTTCTAGTT+TGG - chr2.3:26864029-26864048 None:intergenic 35.0%
! TGAAACAAAAGCTGGTGTTA+AGG + chr2.3:26863595-26863614 MS.gene040564:CDS 35.0%
!! AAGATGTATTTGGTGTCCTA+CGG + chr2.3:26864330-26864349 MS.gene040564:intron 35.0%
!! ACTGGCAAATCTTCTAGTTT+GGG - chr2.3:26864028-26864047 None:intergenic 35.0%
!! GAGGCTCTTGTTGTTAATAT+CGG + chr2.3:26864919-26864938 MS.gene040564:CDS 35.0%
!!! ATCTGTTGCATGCTTTTTCA+AGG + chr2.3:26865704-26865723 MS.gene040564:CDS 35.0%
!!! TCTTTTTGGTGTTACCTAGT+TGG - chr2.3:26864314-26864333 None:intergenic 35.0%
AAGATTTGCCAGTAGTATGC+AGG + chr2.3:26864035-26864054 MS.gene040564:CDS 40.0%
AAGGACTTGGATTGTTGTGA+GGG + chr2.3:26864730-26864749 MS.gene040564:CDS 40.0%
AAGTTCTTCACCAAGACAAG+TGG + chr2.3:26864875-26864894 MS.gene040564:CDS 40.0%
ACTGCTACAGATGAAGTTGA+AGG + chr2.3:26863524-26863543 MS.gene040564:CDS 40.0%
AGGAATAATGTGTTGTGTGC+TGG - chr2.3:26863702-26863721 None:intergenic 40.0%
ATCAGGTGGGTGATGAAATA+AGG - chr2.3:26863654-26863673 None:intergenic 40.0%
ATCGTTTCATTGTGCGACTA+AGG + chr2.3:26865044-26865063 MS.gene040564:intron 40.0%
ATTCACCAGCACTTAATTGG+AGG + chr2.3:26863969-26863988 MS.gene040564:CDS 40.0%
CATCACCCACCTGATAAATA+TGG + chr2.3:26863659-26863678 MS.gene040564:CDS 40.0%
GGAACACGTCTAATGAAACT+TGG + chr2.3:26864652-26864671 MS.gene040564:CDS 40.0%
GGACCGTCAATATATTCCTA+AGG + chr2.3:26865109-26865128 MS.gene040564:intron 40.0%
GGCTATAAAATCAGCAACAG+TGG - chr2.3:26865811-26865830 None:intergenic 40.0%
GGGTATTTATAGCCCTTTGT+GGG - chr2.3:26865503-26865522 None:intergenic 40.0%
GTGGTTCCCATTGTTAAATC+TGG - chr2.3:26864796-26864815 None:intergenic 40.0%
GTGGTTTCTTTGTATCTTGG+AGG - chr2.3:26865792-26865811 None:intergenic 40.0%
TAATATCGGTGATCTTCTGC+AGG + chr2.3:26864933-26864952 MS.gene040564:CDS 40.0%
TCCAAACCATTTGAAGGACT+TGG + chr2.3:26864717-26864736 MS.gene040564:CDS 40.0%
TCCAAGTCCTTCAAATGGTT+TGG - chr2.3:26864721-26864740 None:intergenic 40.0%
TCGTTTCATTGTGCGACTAA+GGG + chr2.3:26865045-26865064 MS.gene040564:intron 40.0%
TCTCAAGGCATGACAAAAAC+AGG + chr2.3:26865536-26865555 MS.gene040564:intron 40.0%
TGACGGTCCAATTCATGTTA+AGG - chr2.3:26865098-26865117 None:intergenic 40.0%
TGGTTCGTCTTGAATCGATT+TGG - chr2.3:26864197-26864216 None:intergenic 40.0%
TGTCTTGGTGAAGAACTTGA+AGG - chr2.3:26864873-26864892 None:intergenic 40.0%
TTCACCAGCACTTAATTGGA+GGG + chr2.3:26863970-26863989 MS.gene040564:CDS 40.0%
TTGTATGCAAAAGGGCTTGA+TGG + chr2.3:26865834-26865853 MS.gene040564:CDS 40.0%
! AAAGCAAGCATCTGAGACAT+GGG + chr2.3:26863784-26863803 MS.gene040564:CDS 40.0%
! AAGCCCTTTTGCATACAAGT+AGG - chr2.3:26865832-26865851 None:intergenic 40.0%
! ATGCTTCTAGAAGCTAGTTG+AGG - chr2.3:26865417-26865436 None:intergenic 40.0%
! CCCATTGTTAAATCTGGTTC+AGG - chr2.3:26864790-26864809 None:intergenic 40.0%
! TAAAGCAAGCATCTGAGACA+TGG + chr2.3:26863783-26863802 MS.gene040564:CDS 40.0%
!! CTGGCAAATCTTCTAGTTTG+GGG - chr2.3:26864027-26864046 None:intergenic 40.0%
!! GAACATAGAGTACTGGCAAA+TGG + chr2.3:26865666-26865685 MS.gene040564:CDS 40.0%
!! GAGTGTTGAACATAGAGTAC+TGG + chr2.3:26865659-26865678 MS.gene040564:CDS 40.0%
!! TGGCAAATCTTCTAGTTTGG+GGG - chr2.3:26864026-26864045 None:intergenic 40.0%
!! TTGTGTGCTGGTTGAATTTG+TGG - chr2.3:26863690-26863709 None:intergenic 40.0%
ACGCGAAAACAATCCCACAA+AGG + chr2.3:26865487-26865506 MS.gene040564:intron 45.0%
AGAACTCACCTGCATACTAC+TGG - chr2.3:26864046-26864065 None:intergenic 45.0%
AGGACTTGGATTGTTGTGAG+GGG + chr2.3:26864731-26864750 MS.gene040564:CDS 45.0%
AGGGCTATAAATACCCCTCT+TGG + chr2.3:26865507-26865526 MS.gene040564:intron 45.0%
CCTTGAGAATGATCCCAAGA+GGG - chr2.3:26865524-26865543 None:intergenic 45.0%
CGCGAAAACAATCCCACAAA+GGG + chr2.3:26865488-26865507 MS.gene040564:intron 45.0%
CTTCTCCAAGACCATATTGG+TGG + chr2.3:26864847-26864866 MS.gene040564:CDS 45.0%
CTTGAGAATGATCCCAAGAG+GGG - chr2.3:26865523-26865542 None:intergenic 45.0%
GAACTTGAAGGCCACCAATA+TGG - chr2.3:26864861-26864880 None:intergenic 45.0%
GAAGGACTTGGATTGTTGTG+AGG + chr2.3:26864729-26864748 MS.gene040564:CDS 45.0%
GAATAGTCCCATCTCCAACT+AGG + chr2.3:26864297-26864316 MS.gene040564:intron 45.0%
GACATGGGGTTTCTTTCAAG+TGG + chr2.3:26863799-26863818 MS.gene040564:CDS 45.0%
GATGGGACTATTCATGGTGT+AGG - chr2.3:26864290-26864309 None:intergenic 45.0%
GGGCTATAAATACCCCTCTT+GGG + chr2.3:26865508-26865527 MS.gene040564:intron 45.0%
GGTGGGTGATGAAATAAGGT+TGG - chr2.3:26863650-26863669 None:intergenic 45.0%
GTACATCGATCCACTTGTCT+TGG - chr2.3:26864888-26864907 None:intergenic 45.0%
GTATCCCTCCAATTAAGTGC+TGG - chr2.3:26863977-26863996 None:intergenic 45.0%
GTGCTTCTCCAAGACCATAT+TGG + chr2.3:26864844-26864863 MS.gene040564:CDS 45.0%
GTTGGAGATGGGACTATTCA+TGG - chr2.3:26864296-26864315 None:intergenic 45.0%
TAGAGATCGAACAAGGCCAT+TGG + chr2.3:26863919-26863938 MS.gene040564:CDS 45.0%
TATTCCCAAAGCACGTGCTT+GGG + chr2.3:26865283-26865302 MS.gene040564:intron 45.0%
! AAATCTGGTTCAGGACAAGC+AGG - chr2.3:26864781-26864800 None:intergenic 45.0%
! AAGCAAGCATCTGAGACATG+GGG + chr2.3:26863785-26863804 MS.gene040564:CDS 45.0%
! AATGCCCTCTAGAAAGGCTT+AGG + chr2.3:26865340-26865359 MS.gene040564:intron 45.0%
! CTTCTAGAAGCTAGTTGAGG+CGG - chr2.3:26865414-26865433 None:intergenic 45.0%
! GGGGTATTTATAGCCCTTTG+TGG - chr2.3:26865504-26865523 None:intergenic 45.0%
! GGTGTTACCTAGTTGGAGAT+GGG - chr2.3:26864307-26864326 None:intergenic 45.0%
!! AGAGTACTGGCAAATGGCAT+TGG + chr2.3:26865672-26865691 MS.gene040564:CDS 45.0%
!! GTTAAGGGCCTTGTTGATCA+AGG + chr2.3:26863611-26863630 MS.gene040564:CDS 45.0%
!! TGGTGTTACCTAGTTGGAGA+TGG - chr2.3:26864308-26864327 None:intergenic 45.0%
!!! GTTGCATGCTTTTTCAAGGC+AGG + chr2.3:26865708-26865727 MS.gene040564:CDS 45.0%
!!! ATATTTCTTTTTTTTTTTTT+TGG + chr2.3:26864118-26864137 MS.gene040564:intron 5.0%
ACTTAAGCCCCAAGCAAGCA+GGG - chr2.3:26865466-26865485 None:intergenic 50.0%
ACTTAAGGCCCTGCTTGCTT+GGG + chr2.3:26865455-26865474 MS.gene040564:intron 50.0%
ATTCCCAAAGCACGTGCTTG+GGG + chr2.3:26865284-26865303 MS.gene040564:intron 50.0%
CAAAAGGCTCCATGAAGCCT+GGG + chr2.3:26865167-26865186 MS.gene040564:intron 50.0%
CAAAAGGGCTCCTGAGTTCT+GGG + chr2.3:26865370-26865389 MS.gene040564:intron 50.0%
CAAGTGGATCGATGTACCAC+CGG + chr2.3:26864891-26864910 MS.gene040564:CDS 50.0%
CCCTCTTGGGATCATTCTCA+AGG + chr2.3:26865521-26865540 MS.gene040564:intron 50.0%
CTATTCCCAAAGCACGTGCT+TGG + chr2.3:26865282-26865301 MS.gene040564:intron 50.0%
GAAGGCCACCAATATGGTCT+TGG - chr2.3:26864855-26864874 None:intergenic 50.0%
GCCTTGAGAATGATCCCAAG+AGG - chr2.3:26865525-26865544 None:intergenic 50.0%
GGCACCTAAGCCTTTCTAGA+GGG - chr2.3:26865347-26865366 None:intergenic 50.0%
TGATATGGTCGTGTCGTGTC+TGG + chr2.3:26864431-26864450 MS.gene040564:intron 50.0%
TGCGCTTTCAGATGCTTGCT+AGG - chr2.3:26865218-26865237 None:intergenic 50.0%
! AACTCAGGAGCCCTTTTGGA+GGG - chr2.3:26865368-26865387 None:intergenic 50.0%
! CGCTTTCAGATGCTTGCTAG+GGG - chr2.3:26865216-26865235 None:intergenic 50.0%
! GCGCTTTCAGATGCTTGCTA+GGG - chr2.3:26865217-26865236 None:intergenic 50.0%
! GCTTCATGGAGCCTTTTGGA+GGG - chr2.3:26865165-26865184 None:intergenic 50.0%
! GCTTTCAGATGCTTGCTAGG+GGG - chr2.3:26865215-26865234 None:intergenic 50.0%
!! CAAGCACGTGCTTTGGGAAT+AGG - chr2.3:26865284-26865303 None:intergenic 50.0%
ACAACAAGAGCCTCGGGTAC+CGG - chr2.3:26864913-26864932 None:intergenic 55.0%
AGGCTTAGGTGCCCTCCAAA+AGG + chr2.3:26865354-26865373 MS.gene040564:intron 55.0%
CCAAAAGGCTCCATGAAGCC+TGG + chr2.3:26865166-26865185 MS.gene040564:intron 55.0%
CCAAAAGGGCTCCTGAGTTC+TGG + chr2.3:26865369-26865388 MS.gene040564:intron 55.0%
CTTAAGGCCCTGCTTGCTTG+GGG + chr2.3:26865456-26865475 MS.gene040564:intron 55.0%
GACTTAAGCCCCAAGCAAGC+AGG - chr2.3:26865467-26865486 None:intergenic 55.0%
GACTTAAGGCCCTGCTTGCT+TGG + chr2.3:26865454-26865473 MS.gene040564:intron 55.0%
GGCTTAGGTGCCCTCCAAAA+GGG + chr2.3:26865355-26865374 MS.gene040564:intron 55.0%
GGGCACCTAAGCCTTTCTAG+AGG - chr2.3:26865348-26865367 None:intergenic 55.0%
TTCCCAAAGCACGTGCTTGG+GGG + chr2.3:26865285-26865304 MS.gene040564:intron 55.0%
! AATGCCCTCTAGAAAGGCCC+AGG + chr2.3:26865137-26865156 MS.gene040564:intron 55.0%
! CCAGAACTCAGGAGCCCTTT+TGG - chr2.3:26865372-26865391 None:intergenic 55.0%
! CCAGGCTTCATGGAGCCTTT+TGG - chr2.3:26865169-26865188 None:intergenic 55.0%
! GAACTCAGGAGCCCTTTTGG+AGG - chr2.3:26865369-26865388 None:intergenic 55.0%
! GGCTCGAATGCCCTCTAGAA+AGG + chr2.3:26865131-26865150 MS.gene040564:intron 55.0%
! GGCTTCATGGAGCCTTTTGG+AGG - chr2.3:26865166-26865185 None:intergenic 55.0%
! TTCAGATGCTTGCTAGGGGG+TGG - chr2.3:26865212-26865231 None:intergenic 55.0%
!! TAGAGGGCATTCGAGCCCTT+AGG - chr2.3:26865128-26865147 None:intergenic 55.0%
AGCCCCCAAGCACGTGCTTT+GGG - chr2.3:26865290-26865309 None:intergenic 60.0%
CTAGGGGGTGGTGTCCTTTG+GGG - chr2.3:26865200-26865219 None:intergenic 60.0%
GCTAGGGGGTGGTGTCCTTT+GGG - chr2.3:26865201-26865220 None:intergenic 60.0%
GGCACCTGGGCCTTTCTAGA+GGG - chr2.3:26865144-26865163 None:intergenic 60.0%
GGTCGTGTCGTGTCTGGTGT+CGG + chr2.3:26864437-26864456 MS.gene040564:intron 60.0%
TAGGGGGTGGTGTCCTTTGG+GGG - chr2.3:26865199-26865218 None:intergenic 60.0%
TGCTAGGGGGTGGTGTCCTT+TGG - chr2.3:26865202-26865221 None:intergenic 60.0%
!!! GAGCCTTTTGGAGGGCACCT+GGG - chr2.3:26865157-26865176 None:intergenic 60.0%
AAGCACGTGCTTGGGGGCTG+TGG + chr2.3:26865291-26865310 MS.gene040564:intron 65.0%
AGGCCCAGGTGCCCTCCAAA+AGG + chr2.3:26865151-26865170 MS.gene040564:intron 65.0%
AGGGGGTGGTGTCCTTTGGG+GGG - chr2.3:26865198-26865217 None:intergenic 65.0%
CAGCCCCCAAGCACGTGCTT+TGG - chr2.3:26865291-26865310 None:intergenic 65.0%
CGATGTACCACCGGTACCCG+AGG + chr2.3:26864900-26864919 MS.gene040564:CDS 65.0%
GGGCACCTGGGCCTTTCTAG+AGG - chr2.3:26865145-26865164 None:intergenic 65.0%
! TTGAGGCGGCGCCTCTGGAA+GGG - chr2.3:26865400-26865419 None:intergenic 65.0%
!! ACAAGAGCCTCGGGTACCGG+TGG - chr2.3:26864910-26864929 None:intergenic 65.0%
!!! GGAGCCTTTTGGAGGGCACC+TGG - chr2.3:26865158-26865177 None:intergenic 65.0%
GCTAGTTGAGGCGGCGCCTC+TGG - chr2.3:26865405-26865424 None:intergenic 70.0%
GGGGACACGCCCAGGCTTCA+TGG - chr2.3:26865179-26865198 None:intergenic 70.0%
GTTGAGGCGGCGCCTCTGGA+AGG - chr2.3:26865401-26865420 None:intergenic 70.0%
TTCTGGGCGCGCCCTTCCAG+AGG + chr2.3:26865386-26865405 MS.gene040564:intron 70.0%
! GAAGGGCGCGCCCAGAACTC+AGG - chr2.3:26865383-26865402 None:intergenic 70.0%
! TCCTTTGGGGGGACACGCCC+AGG - chr2.3:26865187-26865206 None:intergenic 70.0%
GCCTGGGCGTGTCCCCCCAA+AGG + chr2.3:26865183-26865202 MS.gene040564:intron 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 26863515 26865887 26863515 ID=MS.gene040564
chr2.3 mRNA 26863515 26865887 26863515 ID=MS.gene040564.t1;Parent=MS.gene040564
chr2.3 exon 26863515 26864056 26863515 ID=MS.gene040564.t1.exon1;Parent=MS.gene040564.t1
chr2.3 CDS 26863515 26864056 26863515 ID=cds.MS.gene040564.t1;Parent=MS.gene040564.t1
chr2.3 exon 26864633 26864954 26864633 ID=MS.gene040564.t1.exon2;Parent=MS.gene040564.t1
chr2.3 CDS 26864633 26864954 26864633 ID=cds.MS.gene040564.t1;Parent=MS.gene040564.t1
chr2.3 exon 26865636 26865887 26865636 ID=MS.gene040564.t1.exon3;Parent=MS.gene040564.t1
chr2.3 CDS 26865636 26865887 26865636 ID=cds.MS.gene040564.t1;Parent=MS.gene040564.t1
Gene Sequence

>MS.gene040564

ATGGGCTTTACTGCTACAGATGAAGTTGAAGGCAACTTCAAATTCAACTCTGATAGGCTGCAAGAGCTCAAAGCATTTGATGAAACAAAAGCTGGTGTTAAGGGCCTTGTTGATCAAGGTATTCTCAAAATACCAACCTTATTTCATCACCCACCTGATAAATATGGAATTGCCACAAATTCAACCAGCACACAACACATTATTCCTGTTATAGACTTAGCAAATATTGGCAAAGATCCAAATACAAGGCAAGAACTTATAAGCAAAATAAAGCAAGCATCTGAGACATGGGGTTTCTTTCAAGTGGTTAATCATGGAATTCCTTTGAATGTTCTTGAGGATATGAAAGATGGTGTTAGAAGATTCTTTGAACAAGATACTGAAGTGAAGAAAGAGATGTATACTAGAGATCGAACAAGGCCATTGGTTTATAATAGCAATTTTGATTTGTATAATTCACCAGCACTTAATTGGAGGGATACTTTTATATGTGACTTTGCAGTTAATGCCCCCAAACTAGAAGATTTGCCAGTAGTATGCAGGTGAGTTCTTGTTTATATATATACTGCCTCAAATTTTAGGTCACTTTCATCAATATTGAATATATTTCTTTTTTTTTTTTTTGGTCTAGATATTGAATATATTTCTATTAATTAGCAAAATAGGTTAGAATTTGTCTCCAAATCGATTCAAGACGAACCAATAATAGTTTGTTTCAATTTTACCAAATTTTTATAACAATTTTGTCCGGGTTGATCATTTTCCTTTATGACCTACACCATGAATAGTCCCATCTCCAACTAGGTAACACCAAAAAGATGTATTTGGTGTCCTACGGCTACATGTATCTATATAACACTAACACATATAGGTACATTCATTTAATTAATTAATTTTTTAAATTATATTCTTGTGATGATATGGTCGTGTCGTGTCTGGTGTCGGTGTTAGCATTTCATGTGTCTCCAAACTCTACTAATGAACATGGAAAAATTATCAATCAAAGATGTTAAGTGAAATTAAGCAACTAATTATAAAAGGCTAGGAGGTTAAGTTTAACATGATATTCCTATTATAGGGAACTTAATTTATTGCTTGGTGATTTCATATTCTTGTAGGGATATACTTATGGAATATGGAACACGTCTAATGAAACTTGGAATAGTACTCTTTGAATTACTATCAGAAGCTCTTGCATTGCATCCAAACCATTTGAAGGACTTGGATTGTTGTGAGGGGAATATGATAATTGGTCATTACTATCCTGCTTGTCCTGAACCAGATTTAACAATGGGAACCACCAAACATTCTGATGTTAGTTTTCTCACAGTGCTTCTCCAAGACCATATTGGTGGCCTTCAAGTTCTTCACCAAGACAAGTGGATCGATGTACCACCGGTACCCGAGGCTCTTGTTGTTAATATCGGTGATCTTCTGCAGGCAAGTTCTCTATTTACTATTAGGCTTGTAATATTGCATTGAAAATTAAAATTGTTAATAATTTTGTGATTGATTTTTTTTACAAATGAATCGTTTCATTGTGCGACTAAGGGAGAAATTTTTTTTATATGTGTAAATAACCTTAACATGAATTGGACCGTCAATATATTCCTAAGGGCTCGAATGCCCTCTAGAAAGGCCCAGGTGCCCTCCAAAAGGCTCCATGAAGCCTGGGCGTGTCCCCCCAAAGGACACCACCCCCTAGCAAGCATCTGAAAGCGCAAATAGCTCATACGAATGATCAATATCATAGAATCATCACTTCGCCTATTCCCAAAGCACGTGCTTGGGGGCTGTGGACCGTCAATATATTCTTAAGGGCTCGAATGCCCTCTAGAAAGGCTTAGGTGCCCTCCAAAAGGGCTCCTGAGTTCTGGGCGCGCCCTTCCAGAGGCGCCGCCTCAACTAGCTTCTAGAAGCATCTAGAGCTTAGTAAAAAGACTTAAGGCCCTGCTTGCTTGGGGCTTAAGTCACGCGAAAACAATCCCACAAAGGGCTATAAATACCCCTCTTGGGATCATTCTCAAGGCATGACAAAAACAGGCTAAACCCTAGTTTCTAATACTGTACTCACTGCAAGTACATGAATTTATCTAATTAGAAATTTTTAATGAACTACAGCTCATAACAAATGACAAATTCAAGAGTGTTGAACATAGAGTACTGGCAAATGGCATTGGTCCAAGAATATCTGTTGCATGCTTTTTCAAGGCAGGTCTTAGAGCAAAAGAAAAGCTTTATGGACCTATAACAGAATTATTATCAGAAAACAACCCTCCAAGATACAAAGAAACCACTGTTGCTGATTTTATAGCCTACTTGTATGCAAAAGGGCTTGATGGCACTTCTGTTCTTCAAGACTTCAAGCTTTGA
Protein sequence

>MS.gene040564.t1

MGFTATDEVEGNFKFNSDRLQELKAFDETKAGVKGLVDQGILKIPTLFHHPPDKYGIATNSTSTQHIIPVIDLANIGKDPNTRQELISKIKQASETWGFFQVVNHGIPLNVLEDMKDGVRRFFEQDTEVKKEMYTRDRTRPLVYNSNFDLYNSPALNWRDTFICDFAVNAPKLEDLPVVCRDILMEYGTRLMKLGIVLFELLSEALALHPNHLKDLDCCEGNMIIGHYYPACPEPDLTMGTTKHSDVSFLTVLLQDHIGGLQVLHQDKWIDVPPVPEALVVNIGDLLQLITNDKFKSVEHRVLANGIGPRISVACFFKAGLRAKEKLYGPITELLSENNPPRYKETTVADFIAYLYAKGLDGTSVLQDFKL