AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39687

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39687.t1 MTR_8g009080 93.850 374 21 1 1 372 27 400 0.0 722
MS.gene39687.t1 MTR_8g009080 92.014 288 21 1 1 286 27 314 0.0 548
MS.gene39687.t1 MTR_8g009080 91.930 285 21 1 1 283 27 311 0.0 540
MS.gene39687.t1 MTR_2g069210 66.017 359 120 1 13 369 9 367 0.0 510
MS.gene39687.t1 MTR_8g009160 65.278 360 122 3 12 369 6 364 1.75e-180 505
MS.gene39687.t1 MTR_2g069190 63.342 371 134 1 1 369 1 371 2.11e-178 500
MS.gene39687.t1 MTR_8g028435 65.143 350 120 2 21 369 16 364 3.80e-177 497
MS.gene39687.t1 MTR_8g009090 65.000 360 123 3 12 369 6 364 2.21e-176 495
MS.gene39687.t1 MTR_8g008930 65.527 351 118 3 21 369 16 365 1.20e-174 490
MS.gene39687.t1 MTR_8g009110 64.103 351 123 3 21 369 16 365 3.64e-174 489
MS.gene39687.t1 MTR_2g069090 62.097 372 138 2 1 369 1 372 5.26e-174 489
MS.gene39687.t1 MTR_8g009170 62.431 362 131 5 12 369 6 366 2.65e-168 474
MS.gene39687.t1 MTR_2g069300 60.563 355 137 2 18 369 4 358 7.10e-168 473
MS.gene39687.t1 MTR_1g043770 62.500 352 131 1 18 369 5 355 7.04e-166 468
MS.gene39687.t1 MTR_4g117880 60.497 362 138 5 12 369 6 366 1.44e-160 455
MS.gene39687.t1 MTR_1g043775 61.582 354 133 3 18 369 5 357 4.18e-159 451
MS.gene39687.t1 MTR_1g043810 60.169 354 138 3 18 369 5 357 1.46e-155 442
MS.gene39687.t1 MTR_8g041620 55.041 367 160 3 8 369 8 374 3.36e-152 434
MS.gene39687.t1 MTR_1g043760 59.375 352 141 2 18 368 5 355 1.28e-151 432
MS.gene39687.t1 MTR_8g009150 58.120 351 124 4 21 369 16 345 6.34e-151 429
MS.gene39687.t1 MTR_2g069010 56.354 362 150 3 17 371 17 377 1.55e-149 427
MS.gene39687.t1 MTR_8g041600 53.951 367 164 3 8 369 8 374 4.68e-149 426
MS.gene39687.t1 MTR_1g093120 54.545 374 161 3 1 369 1 370 2.78e-148 424
MS.gene39687.t1 MTR_8g009120 57.265 351 135 5 21 369 16 353 8.16e-145 414
MS.gene39687.t1 MTR_7g056347 52.815 373 172 2 1 369 1 373 1.38e-144 414
MS.gene39687.t1 MTR_8g063070 53.619 373 169 2 1 369 1 373 4.40e-144 413
MS.gene39687.t1 MTR_1g093140 52.480 383 163 5 1 369 1 378 1.31e-141 407
MS.gene39687.t1 MTR_2g069060 52.304 369 156 3 1 369 1 349 8.25e-140 401
MS.gene39687.t1 MTR_1g093110 52.406 374 167 4 4 369 4 374 1.29e-139 402
MS.gene39687.t1 MTR_0032s0040 53.067 375 160 5 8 369 2 373 1.22e-138 399
MS.gene39687.t1 MTR_2g068950 53.889 360 158 3 17 369 11 369 1.33e-138 399
MS.gene39687.t1 MTR_2g069020 54.624 346 153 2 17 358 15 360 5.76e-137 395
MS.gene39687.t1 MTR_2g068960 53.056 360 161 3 17 369 11 369 1.10e-136 394
MS.gene39687.t1 MTR_2g069020 54.624 346 153 2 17 358 15 360 1.18e-136 395
MS.gene39687.t1 MTR_8g006930 52.533 375 170 3 1 369 1 373 3.58e-136 393
MS.gene39687.t1 MTR_4g119410 52.547 373 173 2 1 369 1 373 8.47e-136 392
MS.gene39687.t1 MTR_8g062600 51.475 373 177 2 1 369 1 373 1.53e-135 391
MS.gene39687.t1 MTR_4g024660 50.670 373 180 2 1 369 1 373 1.78e-135 391
MS.gene39687.t1 MTR_7g056393 51.743 373 176 2 1 369 1 373 1.87e-132 384
MS.gene39687.t1 MTR_7g078010 50.938 373 179 2 1 369 1 373 2.83e-132 383
MS.gene39687.t1 MTR_7g029655 50.276 362 168 5 17 369 12 370 4.55e-130 377
MS.gene39687.t1 MTR_8g469400 50.402 373 168 4 1 369 1 360 3.81e-129 375
MS.gene39687.t1 MTR_1g070185 50.704 355 168 3 17 369 18 367 5.52e-126 367
MS.gene39687.t1 MTR_1g043770 62.825 269 99 1 18 286 5 272 1.06e-122 356
MS.gene39687.t1 MTR_8g009170 60.432 278 106 4 12 286 6 282 1.28e-122 356
MS.gene39687.t1 MTR_1g043775 60.000 290 112 4 18 304 5 293 2.13e-120 350
MS.gene39687.t1 MTR_1g043810 61.993 271 100 3 18 286 5 274 1.21e-119 349
MS.gene39687.t1 MTR_8g041600 53.521 284 128 2 8 287 8 291 5.98e-115 337
MS.gene39687.t1 MTR_8g009180 62.097 248 78 4 138 369 47 294 1.14e-110 325
MS.gene39687.t1 MTR_7g056353 46.761 355 159 4 17 368 19 346 1.22e-103 315
MS.gene39687.t1 MTR_7g078010 52.083 288 137 1 1 287 1 288 2.98e-103 306
MS.gene39687.t1 MTR_7g105070 41.620 358 205 3 17 371 8 364 2.99e-101 304
MS.gene39687.t1 MTR_2g069060 54.656 247 109 1 44 287 2 248 1.24e-98 293
MS.gene39687.t1 MTR_1g032140 43.820 356 191 4 17 368 14 364 4.77e-92 280
MS.gene39687.t1 MTR_1g032220 42.416 356 196 5 17 368 21 371 6.05e-92 280
MS.gene39687.t1 MTR_1g032250 41.292 356 200 4 17 368 21 371 1.27e-87 269
MS.gene39687.t1 MTR_1g043840 53.191 188 83 2 180 363 50 236 1.86e-66 214
MS.gene39687.t1 MTR_1g043840 61.842 76 28 1 74 149 254 328 4.85e-24 101
MS.gene39687.t1 MTR_7g068650 35.876 354 208 8 24 362 6 355 7.06e-63 205
MS.gene39687.t1 MTR_4g015790 33.799 358 201 8 33 362 14 363 2.09e-59 196
MS.gene39687.t1 MTR_5g065010 33.721 344 216 9 33 369 4 342 3.05e-59 195
MS.gene39687.t1 MTR_3g092890 36.774 310 178 6 66 368 38 336 3.97e-59 195
MS.gene39687.t1 MTR_1g044105 57.143 168 64 3 18 178 5 171 1.97e-58 187
MS.gene39687.t1 MTR_5g082750 35.088 342 204 8 33 362 14 349 7.94e-57 189
MS.gene39687.t1 MTR_8g024120 33.442 308 195 4 66 369 42 343 9.62e-57 189
MS.gene39687.t1 MTR_2g068840 33.903 351 211 7 31 369 20 361 6.77e-56 187
MS.gene39687.t1 MTR_5g055690 29.942 344 227 6 33 369 13 349 8.64e-54 181
MS.gene39687.t1 MTR_1g070120 36.093 302 170 10 57 347 33 322 4.06e-53 179
MS.gene39687.t1 MTR_1g070135 36.301 292 172 8 66 351 38 321 1.01e-52 178
MS.gene39687.t1 MTR_7g056370 48.352 182 93 1 27 207 6 187 1.64e-52 174
MS.gene39687.t1 MTR_6g015950 34.906 318 185 8 42 349 14 319 2.53e-52 177
MS.gene39687.t1 MTR_5g048850 28.488 344 235 6 33 371 13 350 1.49e-51 176
MS.gene39687.t1 MTR_0009s0050 29.191 346 232 7 32 371 12 350 3.16e-51 175
MS.gene39687.t1 MTR_5g055820 29.855 345 226 8 33 369 13 349 3.24e-51 175
MS.gene39687.t1 MTR_0009s0050 29.191 346 232 7 32 371 12 350 4.60e-51 174
MS.gene39687.t1 MTR_3g063180 32.647 340 211 10 33 360 10 343 8.45e-51 174
MS.gene39687.t1 MTR_1g070085 34.967 306 176 9 65 359 36 329 1.27e-50 173
MS.gene39687.t1 MTR_1g070085 34.967 306 176 9 65 359 36 329 1.27e-50 173
MS.gene39687.t1 MTR_2g072890 29.217 332 222 9 38 362 23 348 7.58e-50 171
MS.gene39687.t1 MTR_5g032870 35.789 285 171 5 66 342 38 318 1.68e-49 170
MS.gene39687.t1 MTR_0328s0030 29.738 343 228 7 33 369 11 346 3.19e-49 169
MS.gene39687.t1 MTR_5g048570 28.940 349 227 10 32 371 12 348 3.66e-49 169
MS.gene39687.t1 MTR_5g048740 30.347 346 227 7 33 371 11 349 4.78e-49 169
MS.gene39687.t1 MTR_8g064200 29.586 338 218 8 33 360 18 345 5.97e-49 169
MS.gene39687.t1 MTR_8g064200 29.586 338 218 8 33 360 23 350 6.59e-49 169
MS.gene39687.t1 MTR_1g034140 34.516 310 176 7 61 351 19 320 8.29e-49 168
MS.gene39687.t1 MTR_2g072910 28.324 346 233 9 32 369 16 354 8.40e-49 168
MS.gene39687.t1 MTR_8g008960 97.403 77 2 0 296 372 29 105 2.60e-48 159
MS.gene39687.t1 MTR_4g087110 34.219 301 167 9 66 342 26 319 2.89e-48 167
MS.gene39687.t1 MTR_3g070860 31.562 320 205 7 58 368 42 356 3.42e-48 167
MS.gene39687.t1 MTR_5g055680 30.938 320 207 7 58 371 39 350 7.85e-48 166
MS.gene39687.t1 MTR_3g045230 30.946 349 221 7 31 369 16 354 9.59e-48 166
MS.gene39687.t1 MTR_7g102720 33.447 293 181 4 84 369 50 335 1.05e-47 165
MS.gene39687.t1 MTR_5g048470 29.586 338 221 8 32 360 17 346 2.53e-47 164
MS.gene39687.t1 MTR_5g048550 28.161 348 231 7 33 371 13 350 2.60e-47 164
MS.gene39687.t1 MTR_1g062110 31.751 337 208 8 32 352 26 356 3.29e-47 165
MS.gene39687.t1 MTR_1g034120 33.775 302 169 7 66 342 26 321 4.00e-47 164
MS.gene39687.t1 MTR_5g055900 29.769 346 226 9 32 369 12 348 6.88e-47 163
MS.gene39687.t1 MTR_0009s0480 29.480 346 229 8 33 371 12 349 7.00e-47 163
MS.gene39687.t1 MTR_4g093840 32.372 312 196 9 66 369 62 366 1.20e-46 163
MS.gene39687.t1 MTR_1g034060 33.444 302 170 7 66 342 26 321 1.38e-46 162
MS.gene39687.t1 MTR_2g025120 33.007 306 183 8 67 363 5 297 2.05e-46 161
MS.gene39687.t1 MTR_2g068800 32.384 281 157 5 31 301 20 277 2.47e-46 160
MS.gene39687.t1 MTR_7g102820 31.818 308 190 5 64 356 65 367 2.67e-46 162
MS.gene39687.t1 MTR_4g087100 33.444 302 168 9 66 342 26 319 3.41e-46 161
MS.gene39687.t1 MTR_8g075890 35.055 271 166 5 66 330 39 305 6.90e-46 161
MS.gene39687.t1 MTR_2g069070 43.575 179 84 1 1 179 1 162 9.42e-46 155
MS.gene39687.t1 MTR_1g033810 29.819 332 218 8 28 349 4 330 1.09e-45 160
MS.gene39687.t1 MTR_4g099380 46.341 164 80 2 19 179 124 282 2.61e-45 157
MS.gene39687.t1 MTR_7g016090 32.915 319 181 8 61 368 34 330 2.80e-45 159
MS.gene39687.t1 MTR_7g016090 32.915 319 181 8 61 368 36 332 2.84e-45 159
MS.gene39687.t1 MTR_5g032880 35.636 275 165 5 84 350 48 318 3.09e-45 165
MS.gene39687.t1 MTR_5g032880 35.088 285 173 5 66 342 376 656 9.99e-44 160
MS.gene39687.t1 MTR_3g091350 28.308 325 219 7 33 349 23 341 3.09e-45 159
MS.gene39687.t1 MTR_2g437380 32.302 291 187 4 85 369 70 356 1.55e-44 157
MS.gene39687.t1 MTR_3g058610 35.271 258 154 4 66 314 39 292 2.63e-44 156
MS.gene39687.t1 MTR_5g059130 32.515 326 191 10 40 350 16 327 2.90e-44 156
MS.gene39687.t1 MTR_8g075830 34.672 274 163 6 66 330 39 305 3.10e-44 157
MS.gene39687.t1 MTR_3g083370 34.528 307 175 10 67 363 5 295 3.36e-44 155
MS.gene39687.t1 MTR_7g081710 31.481 324 209 7 36 352 17 334 3.51e-44 156
MS.gene39687.t1 MTR_3g043900 30.372 349 222 8 31 369 16 353 4.21e-44 156
MS.gene39687.t1 MTR_5g055800 27.826 345 235 7 33 371 13 349 5.80e-44 155
MS.gene39687.t1 MTR_1g070080 33.106 293 178 7 66 350 38 320 8.95e-44 155
MS.gene39687.t1 MTR_1g048940 31.511 311 199 8 69 371 48 352 1.20e-43 155
MS.gene39687.t1 MTR_5g085330 33.673 294 173 8 81 363 18 300 1.26e-43 154
MS.gene39687.t1 MTR_3g091360 31.210 314 200 8 37 338 15 324 1.51e-43 154
MS.gene39687.t1 MTR_3g072820 32.249 338 212 11 28 356 2 331 1.95e-43 154
MS.gene39687.t1 MTR_7g063730 30.796 289 189 6 87 369 82 365 2.12e-43 154
MS.gene39687.t1 MTR_5g022020 33.462 260 164 4 66 318 39 296 5.75e-43 153
MS.gene39687.t1 MTR_7g062580 31.655 278 181 5 87 359 73 346 6.71e-43 153
MS.gene39687.t1 MTR_4g087090 30.745 322 183 11 61 356 22 329 1.27e-42 152
MS.gene39687.t1 MTR_4g087140 31.597 288 169 7 76 342 40 320 1.94e-42 151
MS.gene39687.t1 MTR_4g087120 31.126 302 175 8 66 342 26 319 3.07e-42 151
MS.gene39687.t1 MTR_5g059140 33.441 311 184 11 42 339 16 316 9.77e-42 149
MS.gene39687.t1 MTR_2g083030 31.164 292 175 6 66 349 37 310 1.02e-41 149
MS.gene39687.t1 MTR_7g062570 30.742 283 187 4 85 362 71 349 1.13e-41 149
MS.gene39687.t1 MTR_3g117420 30.347 346 211 8 30 369 33 354 6.11e-41 147
MS.gene39687.t1 MTR_2g102570 33.333 321 178 11 48 351 34 335 6.16e-41 148
MS.gene39687.t1 MTR_2g083000 31.104 299 189 5 59 354 26 310 9.20e-41 146
MS.gene39687.t1 MTR_1g070135 36.564 227 135 6 66 287 38 260 1.46e-40 145
MS.gene39687.t1 MTR_8g074050 31.288 326 203 8 54 369 40 354 2.63e-40 146
MS.gene39687.t1 MTR_5g011250 30.921 304 191 8 66 356 47 344 3.56e-40 145
MS.gene39687.t1 MTR_7g016080 32.765 293 161 9 61 341 36 304 1.23e-39 143
MS.gene39687.t1 MTR_7g062550 30.903 288 190 4 87 369 78 361 1.28e-39 144
MS.gene39687.t1 MTR_1g070085 34.008 247 148 5 121 359 12 251 1.32e-39 142
MS.gene39687.t1 MTR_3g088565 32.333 300 179 10 64 351 1 288 2.55e-39 142
MS.gene39687.t1 MTR_7g062600 30.389 283 185 6 87 362 69 346 2.67e-39 143
MS.gene39687.t1 MTR_8g074070 30.675 326 205 8 54 369 40 354 4.54e-39 142
MS.gene39687.t1 MTR_1g070100 35.808 229 134 4 121 342 8 230 4.75e-39 140
MS.gene39687.t1 MTR_5g055690 30.418 263 172 5 32 287 12 270 5.52e-38 137
MS.gene39687.t1 MTR_7g062560 27.778 288 195 4 87 372 80 356 6.93e-38 139
MS.gene39687.t1 MTR_0009s0050 32.127 221 142 4 156 371 35 252 2.27e-37 135
MS.gene39687.t1 MTR_0009s0050 32.127 221 142 4 156 371 35 252 2.39e-37 135
MS.gene39687.t1 MTR_4g074130 30.952 294 174 9 66 349 40 314 2.64e-37 137
MS.gene39687.t1 MTR_5g005570 31.879 298 177 7 35 318 2 287 1.40e-36 135
MS.gene39687.t1 MTR_3g072810 32.333 300 173 8 64 349 38 321 2.39e-36 135
MS.gene39687.t1 MTR_3g026150 30.519 308 201 8 57 359 52 351 4.98e-36 134
MS.gene39687.t1 MTR_7g451860 31.679 262 162 5 66 318 41 294 1.04e-35 133
MS.gene39687.t1 MTR_7g047670 31.679 262 162 5 66 318 41 294 1.04e-35 133
MS.gene39687.t1 MTR_0056s0160 33.032 221 140 4 156 371 18 235 2.41e-35 129
MS.gene39687.t1 MTR_2g437380 31.855 248 160 3 128 369 18 262 3.64e-35 130
MS.gene39687.t1 MTR_1g011580 29.841 315 180 11 65 364 62 350 3.83e-35 132
MS.gene39687.t1 MTR_4g116010 30.952 294 186 8 56 342 40 323 4.70e-35 132
MS.gene39687.t1 MTR_6g464620 30.421 309 191 5 53 345 51 351 6.04e-35 132
MS.gene39687.t1 MTR_0009s0050 34.682 173 109 2 200 371 1 170 9.88e-35 126
MS.gene39687.t1 MTR_3g040410 30.033 303 184 11 65 354 5 292 1.26e-34 130
MS.gene39687.t1 MTR_6g092620 29.032 279 174 10 64 328 1 269 1.66e-34 129
MS.gene39687.t1 MTR_8g074070 29.874 318 199 8 54 369 40 335 1.69e-34 130
MS.gene39687.t1 MTR_1g081840 31.707 287 169 8 84 353 72 348 1.97e-34 130
MS.gene39687.t1 MTR_0009s0480 29.545 264 175 7 33 290 12 270 2.57e-33 125
MS.gene39687.t1 MTR_1g102070 30.172 348 213 8 27 353 16 354 3.83e-33 127
MS.gene39687.t1 MTR_7g045650 31.557 244 159 4 87 325 78 318 6.09e-33 125
MS.gene39687.t1 MTR_5g048850 28.352 261 179 5 33 288 13 270 6.47e-33 124
MS.gene39687.t1 MTR_1g062110 31.250 272 168 7 32 287 26 294 6.90e-33 125
MS.gene39687.t1 MTR_4g087130 30.132 302 177 8 66 342 26 318 7.62e-33 126
MS.gene39687.t1 MTR_3g464530 29.771 262 155 8 66 314 34 279 7.87e-33 125
MS.gene39687.t1 MTR_3g117485 33.692 279 160 10 85 350 69 335 8.86e-33 125
MS.gene39687.t1 MTR_2g025120 32.314 229 137 6 67 287 5 223 1.91e-31 119
MS.gene39687.t1 MTR_3g096500 27.358 318 200 4 63 353 48 361 2.52e-31 122
MS.gene39687.t1 MTR_8g033380 29.052 327 214 6 39 353 28 348 2.10e-30 119
MS.gene39687.t1 MTR_3g088745 29.703 303 197 6 63 353 33 331 5.89e-30 118
MS.gene39687.t1 MTR_8g093930 26.648 364 240 9 20 367 2 354 1.26e-29 117
MS.gene39687.t1 MTR_3g117485 33.962 265 150 10 98 349 10 262 1.91e-29 115
MS.gene39687.t1 MTR_1g032240 41.558 154 80 2 164 316 1 145 2.07e-29 112
MS.gene39687.t1 MTR_7g077670 31.502 273 170 8 90 352 30 295 2.36e-29 115
MS.gene39687.t1 MTR_3g083370 33.188 229 135 7 67 287 5 223 2.46e-29 113
MS.gene39687.t1 MTR_6g088665 28.923 325 196 12 53 351 7 322 2.56e-29 116
MS.gene39687.t1 MTR_6g088665 29.268 328 192 13 53 351 7 323 4.98e-29 115
MS.gene39687.t1 MTR_4g123020 28.662 314 205 9 56 357 5 311 5.82e-29 115
MS.gene39687.t1 MTR_2g019370 29.260 311 168 11 66 349 28 313 8.46e-29 114
MS.gene39687.t1 MTR_2g072910 26.592 267 184 8 32 290 16 278 8.47e-28 110
MS.gene39687.t1 MTR_8g030880 31.250 304 177 12 67 352 6 295 2.04e-27 110
MS.gene39687.t1 MTR_3g026150 29.365 252 169 5 113 359 1 248 2.51e-27 108
MS.gene39687.t1 MTR_5g027230 28.754 313 180 11 62 356 2 289 3.76e-27 109
MS.gene39687.t1 MTR_0009s0400 33.784 148 94 2 225 371 2 146 6.59e-27 104
MS.gene39687.t1 MTR_8g102600 27.389 314 196 8 61 351 7 311 1.36e-26 108
MS.gene39687.t1 MTR_1g027290 27.900 319 206 10 66 369 29 338 1.98e-26 108
MS.gene39687.t1 MTR_2g070870 27.124 306 172 10 68 349 27 305 3.41e-26 107
MS.gene39687.t1 MTR_5g025050 27.333 300 189 9 65 355 4 283 6.96e-26 106
MS.gene39687.t1 MTR_2g033270 27.675 271 174 8 56 314 5 265 1.03e-25 105
MS.gene39687.t1 MTR_3g464530 28.511 235 139 8 66 287 34 252 1.16e-25 104
MS.gene39687.t1 MTR_4g132770 51.648 91 43 1 227 316 32 122 1.28e-25 101
MS.gene39687.t1 MTR_1g086550 27.811 338 200 12 59 369 12 332 1.70e-25 105
MS.gene39687.t1 MTR_8g461330 26.623 308 181 12 66 349 27 313 7.33e-25 103
MS.gene39687.t1 MTR_8g093980 25.649 308 205 6 59 350 52 351 2.57e-24 103
MS.gene39687.t1 MTR_3g026150 29.661 236 156 6 57 287 52 282 5.68e-24 100
MS.gene39687.t1 MTR_5g025090 25.926 324 191 10 66 370 5 298 6.08e-24 100
MS.gene39687.t1 MTR_1g070110 30.000 250 122 8 110 343 1 213 7.33e-24 99.0
MS.gene39687.t1 MTR_4g115990 29.482 251 159 8 94 342 68 302 9.99e-23 97.8
MS.gene39687.t1 MTR_8g102600 31.818 198 122 5 163 351 68 261 6.49e-22 94.7
MS.gene39687.t1 MTR_5g024940 27.451 306 168 10 62 355 2 265 1.92e-21 93.6
MS.gene39687.t1 MTR_4g100600 27.157 313 195 11 59 351 2 301 1.53e-20 91.7
MS.gene39687.t1 MTR_5g025060 25.862 290 175 9 62 349 2 253 3.19e-20 89.7
MS.gene39687.t1 MTR_4g096840 26.557 305 183 12 66 349 29 313 3.52e-19 87.8
MS.gene39687.t1 MTR_4g099390 45.238 84 44 1 288 369 1 84 1.38e-18 80.1
MS.gene39687.t1 MTR_1g027310 24.919 309 186 9 66 369 49 316 5.96e-18 84.0
MS.gene39687.t1 MTR_4g100590 26.667 300 191 11 68 349 6 294 8.07e-17 80.9
MS.gene39687.t1 MTR_2g069130 46.078 102 48 3 70 168 12 109 1.28e-16 76.3
MS.gene39687.t1 MTR_7g084360 34.118 170 62 3 177 342 7 130 2.36e-15 72.8
MS.gene39687.t1 MTR_3g040440 46.875 64 34 0 237 300 15 78 6.45e-15 74.3
MS.gene39687.t1 MTR_4g100590 30.178 169 102 6 189 349 87 247 3.83e-13 69.3
MS.gene39687.t1 MTR_1g032230 30.714 140 72 2 17 153 15 132 1.21e-12 67.8
MS.gene39687.t1 MTR_4g011720 24.855 173 125 5 185 356 131 299 1.22e-12 68.6
MS.gene39687.t1 MTR_3g108520 21.498 307 218 7 61 352 2 300 2.33e-12 67.8
MS.gene39687.t1 MTR_4g021360 21.908 283 200 7 82 352 25 298 4.23e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39687.t1 AT1G06620 58.630 365 147 2 8 369 2 365 2.72e-160 454
MS.gene39687.t1 AT1G06650 60.000 360 137 3 17 369 10 369 3.18e-159 451
MS.gene39687.t1 AT5G59540 58.101 358 145 3 17 369 9 366 4.38e-159 451
MS.gene39687.t1 AT1G06640 58.056 360 144 3 17 369 10 369 8.18e-154 438
MS.gene39687.t1 AT5G59530 57.423 357 148 4 17 369 8 364 8.60e-152 432
MS.gene39687.t1 AT2G30840 59.331 359 139 4 17 369 5 362 3.58e-151 431
MS.gene39687.t1 AT1G04350 56.425 358 148 4 17 369 6 360 9.66e-150 427
MS.gene39687.t1 AT1G06645 57.500 360 143 5 17 369 23 379 5.76e-149 426
MS.gene39687.t1 AT2G30830 56.901 355 150 3 17 369 5 358 6.58e-149 425
MS.gene39687.t1 AT2G30840 58.217 359 137 5 17 369 5 356 6.19e-145 415
MS.gene39687.t1 AT1G04380 53.258 353 149 2 17 369 9 345 9.85e-142 406
MS.gene39687.t1 AT5G43440 54.342 357 156 4 19 369 10 365 3.87e-141 405
MS.gene39687.t1 AT1G03410 57.692 338 137 3 18 349 5 342 2.41e-139 401
MS.gene39687.t1 AT1G03410 57.692 338 137 3 18 349 42 379 4.56e-139 401
MS.gene39687.t1 AT2G25450 53.371 356 162 4 17 369 5 359 8.70e-138 397
MS.gene39687.t1 AT5G43450 54.213 356 157 3 18 369 9 362 2.84e-137 395
MS.gene39687.t1 AT3G61400 49.448 362 163 6 18 364 10 366 4.34e-128 372
MS.gene39687.t1 AT1G03400 51.524 361 152 5 18 369 5 351 1.79e-126 368
MS.gene39687.t1 AT1G06620 58.511 282 113 2 8 286 2 282 9.64e-121 350
MS.gene39687.t1 AT1G03400 47.815 389 152 6 18 369 5 379 5.49e-120 352
MS.gene39687.t1 AT1G06650 58.845 277 108 2 17 287 10 286 6.57e-118 345
MS.gene39687.t1 AT5G59540 56.884 276 114 3 17 287 9 284 7.26e-118 343
MS.gene39687.t1 AT1G06640 57.609 276 111 2 17 286 10 285 2.08e-116 341
MS.gene39687.t1 AT2G30840 58.545 275 109 2 17 286 5 279 3.02e-116 340
MS.gene39687.t1 AT1G06640 57.040 277 113 2 17 287 10 286 2.51e-115 337
MS.gene39687.t1 AT5G43440 54.380 274 118 4 19 286 10 282 7.35e-108 318
MS.gene39687.t1 AT5G43450 55.000 280 120 3 18 293 9 286 2.80e-107 317
MS.gene39687.t1 AT1G04380 52.030 271 114 2 17 287 9 263 9.65e-103 304
MS.gene39687.t1 AT3G61400 48.944 284 126 5 18 287 10 288 4.54e-97 291
MS.gene39687.t1 AT3G12900 36.047 344 206 9 31 368 20 355 1.24e-64 209
MS.gene39687.t1 AT3G13610 33.333 351 208 8 31 369 25 361 1.01e-61 202
MS.gene39687.t1 AT4G10500 36.570 309 183 6 66 368 44 345 1.55e-60 199
MS.gene39687.t1 AT5G24530 36.755 302 183 5 71 367 40 338 1.16e-59 196
MS.gene39687.t1 AT1G55290 32.682 358 202 9 31 369 24 361 2.59e-57 191
MS.gene39687.t1 AT4G10490 34.091 308 193 5 66 368 42 344 2.23e-56 188
MS.gene39687.t1 AT2G38240 35.000 340 200 9 33 360 12 342 4.65e-56 187
MS.gene39687.t1 AT2G36690 34.320 338 206 8 30 356 18 350 1.36e-54 184
MS.gene39687.t1 AT2G36690 34.320 338 206 8 30 356 18 350 1.36e-54 184
MS.gene39687.t1 AT4G25310 35.274 292 174 8 85 369 70 353 3.38e-52 177
MS.gene39687.t1 AT3G11180 36.806 288 163 7 86 362 112 391 4.10e-52 178
MS.gene39687.t1 AT5G05600 31.700 347 209 9 33 362 27 362 5.74e-52 177
MS.gene39687.t1 AT3G19000 34.824 313 170 9 66 356 32 332 9.71e-52 176
MS.gene39687.t1 AT4G25300 33.904 292 181 7 85 369 70 356 2.05e-51 175
MS.gene39687.t1 AT3G11180 36.749 283 160 7 86 357 112 386 3.25e-51 176
MS.gene39687.t1 AT1G17020 31.287 342 219 10 38 369 23 358 1.92e-50 173
MS.gene39687.t1 AT3G55970 32.059 340 212 9 33 357 14 349 5.21e-49 169
MS.gene39687.t1 AT3G19010 36.149 296 163 7 66 342 28 316 1.56e-48 167
MS.gene39687.t1 AT3G19010 36.149 296 163 7 66 342 28 316 1.56e-48 167
MS.gene39687.t1 AT1G17010 29.619 341 226 8 38 369 23 358 9.11e-48 166
MS.gene39687.t1 AT3G21420 32.676 355 220 10 31 371 15 364 2.92e-46 162
MS.gene39687.t1 AT4G16330 34.539 304 175 10 66 360 67 355 1.72e-45 160
MS.gene39687.t1 AT5G08640 33.447 293 178 7 65 349 42 325 3.95e-45 158
MS.gene39687.t1 AT5G08640 33.447 293 178 7 65 349 42 325 3.95e-45 158
MS.gene39687.t1 AT2G44800 32.441 299 193 5 58 352 44 337 7.40e-45 158
MS.gene39687.t1 AT3G60290 32.558 301 192 6 57 352 43 337 1.06e-44 157
MS.gene39687.t1 AT1G77330 32.890 301 173 9 64 350 1 286 1.07e-44 156
MS.gene39687.t1 AT3G51240 34.926 272 165 6 66 330 38 304 1.53e-44 157
MS.gene39687.t1 AT4G21200 34.296 277 156 7 57 319 28 292 2.69e-44 156
MS.gene39687.t1 AT1G05010 35.117 299 164 10 81 363 17 301 2.71e-44 155
MS.gene39687.t1 AT1G78550 30.690 290 192 4 85 369 71 356 8.58e-44 155
MS.gene39687.t1 AT4G22880 29.395 347 209 10 33 354 7 342 9.40e-42 150
MS.gene39687.t1 AT4G22880 29.395 347 209 10 33 354 7 342 9.40e-42 150
MS.gene39687.t1 AT4G22880 29.395 347 209 10 33 354 7 342 9.40e-42 150
MS.gene39687.t1 AT3G19010 35.211 284 152 10 66 342 28 286 1.68e-40 145
MS.gene39687.t1 AT5G07480 30.195 308 199 7 56 352 34 336 2.28e-40 146
MS.gene39687.t1 AT4G25420 31.746 315 194 6 53 353 48 355 3.03e-40 146
MS.gene39687.t1 AT3G19000 33.730 252 139 7 66 295 32 277 8.49e-40 142
MS.gene39687.t1 AT1G12010 31.373 306 185 9 67 363 8 297 8.71e-40 144
MS.gene39687.t1 AT1G78550 29.856 278 186 4 97 369 5 278 2.01e-39 142
MS.gene39687.t1 AT1G62380 34.191 272 155 9 67 325 8 268 7.80e-39 141
MS.gene39687.t1 AT5G12270 28.531 354 227 10 30 369 18 359 3.63e-38 140
MS.gene39687.t1 AT4G25310 31.615 291 158 9 85 369 70 325 7.69e-38 139
MS.gene39687.t1 AT5G63590 30.537 298 187 8 62 349 10 297 2.03e-37 137
MS.gene39687.t1 AT1G80330 31.081 296 159 10 84 352 59 336 1.70e-36 135
MS.gene39687.t1 AT5G20400 30.945 307 196 8 66 364 45 343 1.03e-35 134
MS.gene39687.t1 AT4G16330 35.714 210 124 4 155 360 47 249 2.07e-35 130
MS.gene39687.t1 AT5G05600 29.044 272 168 8 33 287 27 290 4.63e-35 130
MS.gene39687.t1 AT1G15550 30.476 315 176 11 56 350 47 338 6.71e-35 132
MS.gene39687.t1 AT4G25300 34.715 193 121 3 179 369 73 262 7.57e-35 129
MS.gene39687.t1 AT3G51240 37.895 190 107 5 148 330 35 220 1.28e-34 129
MS.gene39687.t1 AT2G19590 30.216 278 171 10 63 328 8 274 2.05e-34 129
MS.gene39687.t1 AT5G63600 28.750 320 204 8 38 350 8 310 3.09e-34 129
MS.gene39687.t1 AT3G19010 33.607 244 139 6 66 290 28 267 1.55e-33 126
MS.gene39687.t1 AT5G20550 29.967 307 200 8 66 364 45 344 2.40e-33 127
MS.gene39687.t1 AT3G55970 30.370 270 172 8 33 287 14 282 4.29e-33 125
MS.gene39687.t1 AT5G63600 28.660 321 204 9 38 350 8 311 5.35e-33 125
MS.gene39687.t1 AT1G80340 30.293 307 185 9 58 351 42 332 9.29e-33 125
MS.gene39687.t1 AT5G51810 29.487 312 201 5 53 353 50 353 2.30e-32 125
MS.gene39687.t1 AT5G54000 29.965 287 187 7 63 342 45 324 4.29e-32 124
MS.gene39687.t1 AT4G25420 33.469 245 145 5 53 283 48 288 1.61e-31 121
MS.gene39687.t1 AT1G50960 27.152 302 205 7 51 349 25 314 1.67e-31 122
MS.gene39687.t1 AT1G60980 28.616 318 203 6 53 354 44 353 2.65e-31 122
MS.gene39687.t1 AT5G07200 28.165 316 208 6 53 353 45 356 2.97e-31 122
MS.gene39687.t1 AT5G63595 33.725 255 127 9 67 310 26 249 4.66e-31 119
MS.gene39687.t1 AT1G49390 28.328 293 198 6 66 352 45 331 2.07e-29 116
MS.gene39687.t1 AT1G14130 29.260 311 188 10 64 362 7 297 3.06e-29 115
MS.gene39687.t1 AT4G21690 29.181 281 175 8 88 351 61 334 4.59e-29 115
MS.gene39687.t1 AT2G19590 31.687 243 145 9 98 328 26 259 5.20e-29 114
MS.gene39687.t1 AT1G30040 29.137 278 177 8 87 351 44 314 6.44e-28 112
MS.gene39687.t1 AT1G78440 28.289 304 181 11 65 349 17 302 1.99e-27 110
MS.gene39687.t1 AT5G54000 30.120 249 162 6 101 342 1 244 2.13e-27 109
MS.gene39687.t1 AT1G14120 28.485 330 177 13 65 369 7 302 4.21e-27 109
MS.gene39687.t1 AT1G14120 28.485 330 177 13 65 369 7 302 4.21e-27 109
MS.gene39687.t1 AT1G14120 28.485 330 177 13 65 369 7 302 4.21e-27 109
MS.gene39687.t1 AT5G51810 30.522 249 157 4 53 290 50 293 1.60e-26 107
MS.gene39687.t1 AT5G43935 28.904 301 162 13 66 350 19 283 2.01e-26 107
MS.gene39687.t1 AT5G07480 33.862 189 113 6 171 352 44 227 6.53e-26 104
MS.gene39687.t1 AT1G47990 28.383 303 186 11 60 344 4 293 2.77e-25 104
MS.gene39687.t1 AT1G44090 28.710 310 193 9 64 355 61 360 1.09e-24 104
MS.gene39687.t1 AT2G34555 26.168 321 180 10 56 349 17 307 1.49e-24 103
MS.gene39687.t1 AT5G63580 31.381 239 149 7 56 287 10 240 4.46e-24 99.8
MS.gene39687.t1 AT5G63580 31.646 237 147 7 56 285 10 238 5.55e-24 99.8
MS.gene39687.t1 AT5G58660 29.885 261 148 9 86 314 45 302 1.28e-23 100
MS.gene39687.t1 AT3G47190 28.400 250 151 7 85 316 42 281 1.78e-23 100
MS.gene39687.t1 AT1G49390 28.295 258 173 6 101 352 1 252 2.64e-23 98.2
MS.gene39687.t1 AT4G23340 29.181 281 170 8 91 355 30 297 4.72e-23 98.6
MS.gene39687.t1 AT4G23340 32.418 182 112 6 182 355 1 179 1.44e-19 86.3
MS.gene39687.t1 AT5G51310 26.207 290 177 9 88 352 22 299 2.20e-19 88.2
MS.gene39687.t1 AT3G49620 26.459 257 172 5 84 324 60 315 5.50e-19 87.8
MS.gene39687.t1 AT3G46490 25.402 311 200 10 66 351 14 317 7.08e-19 87.0
MS.gene39687.t1 AT3G50210 27.899 276 139 11 84 319 34 289 7.60e-19 87.0
MS.gene39687.t1 AT3G50210 27.899 276 139 11 84 319 34 289 7.60e-19 87.0
MS.gene39687.t1 AT3G50210 27.899 276 139 11 84 319 34 289 7.60e-19 87.0
MS.gene39687.t1 AT3G46500 26.688 311 199 12 61 351 9 310 1.32e-18 86.3
MS.gene39687.t1 AT1G02400 26.537 309 191 10 81 368 34 327 1.98e-18 85.5
MS.gene39687.t1 AT2G06960 35.294 136 71 3 221 356 27 145 5.09e-18 80.5
MS.gene39687.t1 AT5G58660 27.897 233 134 8 86 287 45 274 7.78e-18 83.2
MS.gene39687.t1 AT3G46490 25.475 263 168 8 66 303 14 273 1.18e-17 83.2
MS.gene39687.t1 AT3G49630 26.070 257 173 5 84 324 31 286 4.05e-17 82.0
MS.gene39687.t1 AT3G49630 26.070 257 173 5 84 324 35 290 4.10e-17 82.0
MS.gene39687.t1 AT1G30040 26.389 216 138 7 87 287 44 253 4.48e-17 80.9
MS.gene39687.t1 AT4G16765 30.453 243 140 12 127 350 4 236 4.63e-17 80.5
MS.gene39687.t1 AT4G16765 30.453 243 140 12 127 350 4 236 4.63e-17 80.5
MS.gene39687.t1 AT4G16765 30.453 243 140 12 127 350 4 236 4.63e-17 80.5
MS.gene39687.t1 AT4G16765 31.197 234 132 12 127 341 4 227 3.02e-16 77.8
MS.gene39687.t1 AT3G46500 25.954 262 171 9 61 303 9 266 3.38e-15 75.9
MS.gene39687.t1 AT3G46500 30.049 203 126 8 158 351 41 236 3.39e-15 75.1
MS.gene39687.t1 AT3G46500 30.049 203 126 8 158 351 41 236 3.39e-15 75.1
MS.gene39687.t1 AT3G50210 33.537 164 95 7 167 319 47 207 1.71e-14 73.2
MS.gene39687.t1 AT3G49630 30.488 164 109 5 164 324 56 217 5.57e-14 71.6
MS.gene39687.t1 AT3G46500 29.050 179 113 6 182 351 1 174 5.88e-14 70.1
MS.gene39687.t1 AT1G35190 25.373 268 174 8 60 303 3 268 7.17e-13 69.3
MS.gene39687.t1 AT4G16765 34.711 121 68 4 236 350 75 190 8.60e-13 67.0
MS.gene39687.t1 AT4G16770 26.104 249 159 8 46 275 2 244 3.44e-12 66.6
MS.gene39687.t1 AT3G46500 29.870 154 98 5 158 303 41 192 4.10e-12 65.5
MS.gene39687.t1 AT4G22870 32.000 100 64 2 256 354 2 98 8.52e-12 62.0

Find 78 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGATACTAATTCCTTTAT+AGG 0.151666 8.3:+79970936 None:intergenic
CCTTTGCCATATTTCAAAAT+TGG 0.170092 8.3:-79970831 MS.gene39687:CDS
CTCATATCATTTAAATAGTT+TGG 0.183791 8.3:+79971679 None:intergenic
CAGCCATCAACAAAGCTTTA+TGG 0.211949 8.3:-79970960 MS.gene39687:CDS
CGGAGCCATAAAACAGTAAA+AGG 0.282997 8.3:+79972236 None:intergenic
ATAGTTCACCGGCTGCTAAT+TGG 0.293403 8.3:-79972266 MS.gene39687:CDS
GAAACAAAAGATGGTGTTAA+AGG 0.318707 8.3:-79972630 MS.gene39687:CDS
TCCATGGCAAGAGGCCTTGA+TGG 0.349251 8.3:-79970861 MS.gene39687:CDS
CCTGAACCTGACTTGACTTT+GGG 0.349949 8.3:-79971610 MS.gene39687:CDS
AAAGTCATTATCAGTATGTT+TGG 0.361760 8.3:+79971582 None:intergenic
GTTGATGTATCGCCTGTTCC+TGG 0.363452 8.3:-79971499 MS.gene39687:CDS
TTCTTTCAAGTTGTTAATCA+TGG 0.365642 8.3:-79972423 MS.gene39687:CDS
AAGATAATCCTCCAAAGTAT+AGG 0.371492 8.3:-79970914 MS.gene39687:CDS
AGATAATCCTCCAAAGTATA+GGG 0.390705 8.3:-79970913 MS.gene39687:CDS
AAAGCTTTATGGTCCTATAA+AGG 0.391951 8.3:-79970949 MS.gene39687:CDS
CATACTGATGGTAAATCTTC+CGG 0.398989 8.3:+79972201 None:intergenic
CCCAAAGTCAAGTCAGGTTC+AGG 0.412335 8.3:+79971610 None:intergenic
GATGGTAAATCTTCCGGATT+GGG 0.414025 8.3:+79972207 None:intergenic
TCCTGAACCTGACTTGACTT+TGG 0.416245 8.3:-79971611 MS.gene39687:CDS
TCCAAGTTCTTCATGAAAAT+CGG 0.431534 8.3:-79971525 MS.gene39687:CDS
AACAGAAGGAACAACAAGTT+TGG 0.432421 8.3:+79972527 None:intergenic
GTTGTTTCCCTATACTTTGG+AGG 0.436736 8.3:+79970906 None:intergenic
GGACCATAAAGCTTTGTTGA+TGG 0.447509 8.3:+79970957 None:intergenic
ACAAAACATGTTATGAAACT+TGG 0.454773 8.3:-79971745 MS.gene39687:CDS
GTGCTTCTACAAGATCATAT+TGG 0.458881 8.3:-79971553 MS.gene39687:CDS
ACGTGATCCGGTGAAGCCTT+TGG 0.462405 8.3:-79972313 MS.gene39687:CDS
TGGTATAGAAGTGAGTGTTT+TGG 0.468631 8.3:-79972403 MS.gene39687:CDS
GTTGCTCCCAAAGTCAAGTC+AGG 0.472155 8.3:+79971604 None:intergenic
ACTGTTGTTTCCCTATACTT+TGG 0.480633 8.3:+79970903 None:intergenic
ATGACTAGAGCACCAGGAAC+AGG 0.481185 8.3:+79971487 None:intergenic
TGATGGTAAATCTTCCGGAT+TGG 0.481996 8.3:+79972206 None:intergenic
GGCTCCGAAGTCTCCCAATC+CGG 0.497545 8.3:-79972220 MS.gene39687:CDS
TAACATTGGTGATCTTCTAC+AGG 0.501928 8.3:-79971464 MS.gene39687:intron
AAGCTTGCAACCGATACTCT+TGG 0.505153 8.3:+79970999 None:intergenic
TAGAGAAGCATCTGAGACAT+GGG 0.510723 8.3:-79972448 MS.gene39687:CDS
TGATTATGTTTCTTTCTCCA+TGG 0.512572 8.3:-79970877 MS.gene39687:CDS
AGAATTATACACACGTGATC+CGG 0.515875 8.3:-79972325 MS.gene39687:CDS
AAGATTTACCATCAGTATGC+AGG 0.528722 8.3:-79972197 MS.gene39687:intron
TCCATCAAGGCCTCTTGCCA+TGG 0.529649 8.3:+79970860 None:intergenic
TTATAAACCAAAGGCTTCAC+CGG 0.535396 8.3:+79972306 None:intergenic
GTTCACCGGCTGCTAATTGG+AGG 0.539887 8.3:-79972263 MS.gene39687:CDS
GTTTCTTTCTCCATGGCAAG+AGG 0.545237 8.3:-79970870 MS.gene39687:CDS
CCGATACTCTTGGACCGACA+TGG 0.550782 8.3:+79971009 None:intergenic
AATGATATGAGATGCAATGA+GGG 0.552054 8.3:-79971667 MS.gene39687:CDS
TCTTCCGGATTGGGAGACTT+CGG 0.566775 8.3:+79972216 None:intergenic
AAGTTCTTCATGAAAATCGG+TGG 0.569657 8.3:-79971522 MS.gene39687:CDS
AGTTTGGTGCTGTTGCTTGA+AGG 0.569774 8.3:+79972543 None:intergenic
CTTCTACAAGATCATATTGG+AGG 0.570472 8.3:-79971550 MS.gene39687:CDS
ATTCTTTGAGCAAGATTCTG+AGG 0.571145 8.3:-79972355 MS.gene39687:CDS
GCATTTGATGAAACAAAAGA+TGG 0.578666 8.3:-79972639 MS.gene39687:CDS
CCATGTCGGTCCAAGAGTAT+CGG 0.578969 8.3:-79971009 MS.gene39687:CDS
TGCTTGCAGAGATATAATGC+TGG 0.585679 8.3:-79971773 MS.gene39687:intron
TTAGAGAAGCATCTGAGACA+TGG 0.589154 8.3:-79972449 MS.gene39687:CDS
TTCATCAAGATCCAACAAGA+AGG 0.589955 8.3:-79972491 MS.gene39687:CDS
CTATCATACCTGCATACTGA+TGG 0.590454 8.3:+79972189 None:intergenic
AAATGATATGAGATGCAATG+AGG 0.603518 8.3:-79971668 MS.gene39687:CDS
GTATCCCTCCAATTAGCAGC+CGG 0.605779 8.3:+79972258 None:intergenic
AAATTACTATTATAAACCAA+AGG 0.606180 8.3:+79972297 None:intergenic
GAGTGTTGAGCACAGAGTGG+TGG 0.608516 8.3:-79971036 MS.gene39687:CDS
CAGGACACGAAGGATAGTAA+TGG 0.610611 8.3:+79971629 None:intergenic
AATATGATCTTGTAGAAGCA+CGG 0.612908 8.3:+79971555 None:intergenic
AGTTCTTCATGAAAATCGGT+GGG 0.619127 8.3:-79971521 MS.gene39687:CDS
AGTCCTTGTCGAATTCGTGA+TGG 0.623298 8.3:+79972568 None:intergenic
GAGTTATTATCAGAAGCACT+TGG 0.624454 8.3:-79971709 MS.gene39687:CDS
GCAAAGGAGAAGTTCCATCA+AGG 0.628190 8.3:+79970847 None:intergenic
AATTCGTGATGGAACATGCG+AGG 0.635817 8.3:+79972579 None:intergenic
ATTCGTGATGGAACATGCGA+GGG 0.637054 8.3:+79972580 None:intergenic
ATGTTAATGACTAGAGCACC+AGG 0.639891 8.3:+79971481 None:intergenic
GGTGCTCTAGTCATTAACAT+TGG 0.653493 8.3:-79971478 MS.gene39687:CDS
TTCACCGGCTGCTAATTGGA+GGG 0.653841 8.3:-79972262 MS.gene39687:CDS
AGAGAAGCATCTGAGACATG+GGG 0.666754 8.3:-79972447 MS.gene39687:CDS
ATGATATGAGATGCAATGAG+GGG 0.672675 8.3:-79971666 MS.gene39687:CDS
GGATGAGATGAAGAATGGAG+TGG 0.675495 8.3:-79972382 MS.gene39687:CDS
ATATCAACAAGATCAACAGA+AGG 0.684102 8.3:+79972513 None:intergenic
AGAGTGGTGGCAAACCATGT+CGG 0.690367 8.3:-79971023 MS.gene39687:CDS
CAAGAGTGTTGAGCACAGAG+TGG 0.704603 8.3:-79971039 MS.gene39687:CDS
GTTCCATCACGAATTCGACA+AGG 0.712452 8.3:-79972571 MS.gene39687:CDS
AAGTCAGGTTCAGGACACGA+AGG 0.726655 8.3:+79971619 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAATTTTTTTAAATGAC+AGG + chr8.3:79972142-79972161 None:intergenic 10.0%
!! AAATTACTATTATAAACCAA+AGG + chr8.3:79971238-79971257 None:intergenic 15.0%
!! ATTTAATATCTATAACCTAA+CGG - chr8.3:79972155-79972174 MS.gene39687:intron 15.0%
!!! AAATTTCCAATTTTGAAATA+TGG + chr8.3:79972710-79972729 None:intergenic 15.0%
!!! TAAGTTATAATCATTTTCAT+CGG - chr8.3:79972203-79972222 MS.gene39687:CDS 15.0%
!!! TATAATTCTTTGGAATATTA+AGG + chr8.3:79971454-79971473 None:intergenic 15.0%
!! CTCATATCATTTAAATAGTT+TGG + chr8.3:79971856-79971875 None:intergenic 20.0%
!! TGATATAATATGATTGAATG+TGG + chr8.3:79971679-79971698 None:intergenic 20.0%
!!! AAGTTATAATCATTTTCATC+GGG - chr8.3:79972204-79972223 MS.gene39687:CDS 20.0%
!!! TATAAAGTATTGTTTGTGAT+TGG - chr8.3:79972317-79972336 MS.gene39687:CDS 20.0%
! AAAATAAGATATCATGACTG+TGG - chr8.3:79971422-79971441 MS.gene39687:intron 25.0%
! AAACATTGAAAACTTTGATG+CGG - chr8.3:79971511-79971530 MS.gene39687:CDS 25.0%
! AAAGTCATTATCAGTATGTT+TGG + chr8.3:79971953-79971972 None:intergenic 25.0%
! ACAAAACATGTTATGAAACT+TGG - chr8.3:79971787-79971806 MS.gene39687:intron 25.0%
! ACCTTGTAAAATTTGACATT+CGG - chr8.3:79972409-79972428 MS.gene39687:CDS 25.0%
! ATAGTTGTGATTAAAGCTTT+AGG - chr8.3:79971722-79971741 MS.gene39687:CDS 25.0%
! CTCATTTGACTATAATTCTT+TGG + chr8.3:79971464-79971483 None:intergenic 25.0%
! GATACTATCTTGAATTTATC+TGG - chr8.3:79971578-79971597 MS.gene39687:CDS 25.0%
! TCTGATACTAATTCCTTTAT+AGG + chr8.3:79972599-79972618 None:intergenic 25.0%
! TTTAAATGACAGGATAAGAA+AGG + chr8.3:79972132-79972151 None:intergenic 25.0%
!! TTTTGATCTTTATAGTTCAC+CGG - chr8.3:79971255-79971274 MS.gene39687:intron 25.0%
!!! TTCTTTCAAGTTGTTAATCA+TGG - chr8.3:79971109-79971128 MS.gene39687:intron 25.0%
AAATGATATGAGATGCAATG+AGG - chr8.3:79971864-79971883 MS.gene39687:intron 30.0%
AACGATGAAAATTACTCTGT+CGG + chr8.3:79972246-79972265 None:intergenic 30.0%
AAGATAATCCTCCAAAGTAT+AGG - chr8.3:79972618-79972637 MS.gene39687:CDS 30.0%
AATATGATCTTGTAGAAGCA+CGG + chr8.3:79971980-79971999 None:intergenic 30.0%
AATGATATGAGATGCAATGA+GGG - chr8.3:79971865-79971884 MS.gene39687:intron 30.0%
AGATAATCCTCCAAAGTATA+GGG - chr8.3:79972619-79972638 MS.gene39687:CDS 30.0%
ATATCAACAAGATCAACAGA+AGG + chr8.3:79971022-79971041 None:intergenic 30.0%
CCTTTGCCATATTTCAAAAT+TGG - chr8.3:79972701-79972720 MS.gene39687:CDS 30.0%
GCATTTGATGAAACAAAAGA+TGG - chr8.3:79970893-79970912 MS.gene39687:CDS 30.0%
TATGATTGAATGTGGTTCAT+AGG + chr8.3:79971671-79971690 None:intergenic 30.0%
TCCAAGTTCTTCATGAAAAT+CGG - chr8.3:79972007-79972026 MS.gene39687:intron 30.0%
TGATTATGTTTCTTTCTCCA+TGG - chr8.3:79972655-79972674 MS.gene39687:CDS 30.0%
TTCATAGGTTACTGATAAGT+GGG + chr8.3:79971656-79971675 None:intergenic 30.0%
TTTCATCGTTGGATTGTTAA+AGG - chr8.3:79972256-79972275 MS.gene39687:CDS 30.0%
! AAAGCTTTATGGTCCTATAA+AGG - chr8.3:79972583-79972602 MS.gene39687:CDS 30.0%
! ACAACTATTTTCCTTCTTGT+TGG + chr8.3:79971055-79971074 None:intergenic 30.0%
! GAAACAAAAGATGGTGTTAA+AGG - chr8.3:79970902-79970921 MS.gene39687:CDS 30.0%
! GGATACCTTTTACTGTTTTA+TGG - chr8.3:79971291-79971310 MS.gene39687:intron 30.0%
! TCCGAATGTCAAATTTTACA+AGG + chr8.3:79972413-79972432 None:intergenic 30.0%
!!! CCAATTTTGAAATATGGCAA+AGG + chr8.3:79972704-79972723 None:intergenic 30.0%
AACAGAAGGAACAACAAGTT+TGG + chr8.3:79971008-79971027 None:intergenic 35.0%
AAGATTTACCATCAGTATGC+AGG - chr8.3:79971335-79971354 MS.gene39687:intron 35.0%
AAGTTCTTCATGAAAATCGG+TGG - chr8.3:79972010-79972029 MS.gene39687:intron 35.0%
AGAATTATACACACGTGATC+CGG - chr8.3:79971207-79971226 MS.gene39687:intron 35.0%
AGTTCTTCATGAAAATCGGT+GGG - chr8.3:79972011-79972030 MS.gene39687:intron 35.0%
ATGATATGAGATGCAATGAG+GGG - chr8.3:79971866-79971885 MS.gene39687:intron 35.0%
ATTCTTTGAGCAAGATTCTG+AGG - chr8.3:79971177-79971196 MS.gene39687:intron 35.0%
CATACTGATGGTAAATCTTC+CGG + chr8.3:79971334-79971353 None:intergenic 35.0%
CTTCTACAAGATCATATTGG+AGG - chr8.3:79971982-79972001 MS.gene39687:intron 35.0%
GTGCTTCTACAAGATCATAT+TGG - chr8.3:79971979-79971998 MS.gene39687:intron 35.0%
GTTCATAGGTTACTGATAAG+TGG + chr8.3:79971657-79971676 None:intergenic 35.0%
TAAAACCTGTTTATGCCGTT+AGG + chr8.3:79972173-79972192 None:intergenic 35.0%
TATAACCTAACGGCATAAAC+AGG - chr8.3:79972165-79972184 MS.gene39687:intron 35.0%
TGCATGAGCATAGTGATTAT+TGG - chr8.3:79971397-79971416 MS.gene39687:intron 35.0%
TTATAAACCAAAGGCTTCAC+CGG + chr8.3:79971229-79971248 None:intergenic 35.0%
TTCATCAAGATCCAACAAGA+AGG - chr8.3:79971041-79971060 MS.gene39687:CDS 35.0%
! GACAGAGTAATTTTCATCGT+TGG - chr8.3:79972245-79972264 MS.gene39687:CDS 35.0%
! GATTTTCATGAAGAACTTGG+AGG + chr8.3:79972008-79972027 None:intergenic 35.0%
! TAACATTGGTGATCTTCTAC+AGG - chr8.3:79972068-79972087 MS.gene39687:intron 35.0%
! TGGTATAGAAGTGAGTGTTT+TGG - chr8.3:79971129-79971148 MS.gene39687:intron 35.0%
!! ACCGATTTTCATGAAGAACT+TGG + chr8.3:79972011-79972030 None:intergenic 35.0%
!! ACTGTTGTTTCCCTATACTT+TGG + chr8.3:79972632-79972651 None:intergenic 35.0%
!! GAGTTATTATCAGAAGCACT+TGG - chr8.3:79971823-79971842 MS.gene39687:intron 35.0%
!! GTTTTGGATGAGATGAAGAA+TGG - chr8.3:79971145-79971164 MS.gene39687:intron 35.0%
ATCCTAACCAACCACAATCT+TGG + chr8.3:79971540-79971559 None:intergenic 40.0%
CAGCCATCAACAAAGCTTTA+TGG - chr8.3:79972572-79972591 MS.gene39687:CDS 40.0%
CATTGAAAACTTTGATGCGG+TGG - chr8.3:79971514-79971533 MS.gene39687:CDS 40.0%
CGGAGCCATAAAACAGTAAA+AGG + chr8.3:79971299-79971318 None:intergenic 40.0%
CTATCATACCTGCATACTGA+TGG + chr8.3:79971346-79971365 None:intergenic 40.0%
GATGGTAAATCTTCCGGATT+GGG + chr8.3:79971328-79971347 None:intergenic 40.0%
GGTGCTCTAGTCATTAACAT+TGG - chr8.3:79972054-79972073 MS.gene39687:intron 40.0%
TGATGGTAAATCTTCCGGAT+TGG + chr8.3:79971329-79971348 None:intergenic 40.0%
TGCTTGCAGAGATATAATGC+TGG - chr8.3:79971759-79971778 MS.gene39687:CDS 40.0%
! ATGTTAATGACTAGAGCACC+AGG + chr8.3:79972054-79972073 None:intergenic 40.0%
! GTTGTTTCCCTATACTTTGG+AGG + chr8.3:79972629-79972648 None:intergenic 40.0%
! TGTTTTCGCGACTGTAGTTA+AGG + chr8.3:79971496-79971515 None:intergenic 40.0%
!! GGACCATAAAGCTTTGTTGA+TGG + chr8.3:79972578-79972597 None:intergenic 40.0%
!! TAGAGAAGCATCTGAGACAT+GGG - chr8.3:79971084-79971103 MS.gene39687:intron 40.0%
!! TTAGAGAAGCATCTGAGACA+TGG - chr8.3:79971083-79971102 MS.gene39687:intron 40.0%
AAGCTTGCAACCGATACTCT+TGG + chr8.3:79972536-79972555 None:intergenic 45.0%
AAGGTGACAACACAAGACTG+TGG + chr8.3:79972394-79972413 None:intergenic 45.0%
AGTCCTTGTCGAATTCGTGA+TGG + chr8.3:79970967-79970986 None:intergenic 45.0%
CAGGACACGAAGGATAGTAA+TGG + chr8.3:79971906-79971925 None:intergenic 45.0%
GCAAAGGAGAAGTTCCATCA+AGG + chr8.3:79972688-79972707 None:intergenic 45.0%
GGATGAGATGAAGAATGGAG+TGG - chr8.3:79971150-79971169 MS.gene39687:intron 45.0%
GTTCCATCACGAATTCGACA+AGG - chr8.3:79970961-79970980 MS.gene39687:CDS 45.0%
GTTTCTTTCTCCATGGCAAG+AGG - chr8.3:79972662-79972681 MS.gene39687:CDS 45.0%
TTTCGCGACTGTAGTTAAGG+CGG + chr8.3:79971493-79971512 None:intergenic 45.0%
! AATTCGTGATGGAACATGCG+AGG + chr8.3:79970956-79970975 None:intergenic 45.0%
! ATAGTTCACCGGCTGCTAAT+TGG - chr8.3:79971266-79971285 MS.gene39687:intron 45.0%
! ATTCGTGATGGAACATGCGA+GGG + chr8.3:79970955-79970974 None:intergenic 45.0%
! CCTGAACCTGACTTGACTTT+GGG - chr8.3:79971922-79971941 MS.gene39687:intron 45.0%
! TCCTGAACCTGACTTGACTT+TGG - chr8.3:79971921-79971940 MS.gene39687:intron 45.0%
!! AGAGAAGCATCTGAGACATG+GGG - chr8.3:79971085-79971104 MS.gene39687:intron 45.0%
!! AGTTTGGTGCTGTTGCTTGA+AGG + chr8.3:79970992-79971011 None:intergenic 45.0%
AAGTCAGGTTCAGGACACGA+AGG + chr8.3:79971916-79971935 None:intergenic 50.0%
AGAGTGGTGGCAAACCATGT+CGG - chr8.3:79972509-79972528 MS.gene39687:CDS 50.0%
CCCAAAGTCAAGTCAGGTTC+AGG + chr8.3:79971925-79971944 None:intergenic 50.0%
CGAGCGCGGGACATAATTTA+GGG + chr8.3:79971624-79971643 None:intergenic 50.0%
GTATCCCTCCAATTAGCAGC+CGG + chr8.3:79971277-79971296 None:intergenic 50.0%
GTTGATGTATCGCCTGTTCC+TGG - chr8.3:79972033-79972052 MS.gene39687:intron 50.0%
GTTGCTCCCAAAGTCAAGTC+AGG + chr8.3:79971931-79971950 None:intergenic 50.0%
TCGAGCGCGGGACATAATTT+AGG + chr8.3:79971625-79971644 None:intergenic 50.0%
! ATGACTAGAGCACCAGGAAC+AGG + chr8.3:79972048-79972067 None:intergenic 50.0%
! CCATGTCGGTCCAAGAGTAT+CGG - chr8.3:79972523-79972542 MS.gene39687:CDS 50.0%
! GGCCAAGATTGTGGTTGGTT+AGG - chr8.3:79971535-79971554 MS.gene39687:CDS 50.0%
! TCTTCCGGATTGGGAGACTT+CGG + chr8.3:79971319-79971338 None:intergenic 50.0%
! TTCACCGGCTGCTAATTGGA+GGG - chr8.3:79971270-79971289 MS.gene39687:intron 50.0%
!! CAAGAGTGTTGAGCACAGAG+TGG - chr8.3:79972493-79972512 MS.gene39687:CDS 50.0%
ACGTGATCCGGTGAAGCCTT+TGG - chr8.3:79971219-79971238 MS.gene39687:intron 55.0%
CCGATACTCTTGGACCGACA+TGG + chr8.3:79972526-79972545 None:intergenic 55.0%
TCCATCAAGGCCTCTTGCCA+TGG + chr8.3:79972675-79972694 None:intergenic 55.0%
TCCATGGCAAGAGGCCTTGA+TGG - chr8.3:79972671-79972690 MS.gene39687:CDS 55.0%
TGATGCGGTGGCCAAGATTG+TGG - chr8.3:79971526-79971545 MS.gene39687:CDS 55.0%
! GTTCACCGGCTGCTAATTGG+AGG - chr8.3:79971269-79971288 MS.gene39687:intron 55.0%
!! GAGTGTTGAGCACAGAGTGG+TGG - chr8.3:79972496-79972515 MS.gene39687:CDS 55.0%
GCGGTGGCCAAGATTGTGGT+TGG - chr8.3:79971530-79971549 MS.gene39687:CDS 60.0%
GGCTCCGAAGTCTCCCAATC+CGG - chr8.3:79971312-79971331 MS.gene39687:intron 60.0%
GTGGGTGAGTCACTCGAGCG+CGG + chr8.3:79971638-79971657 None:intergenic 65.0%
TGGGTGAGTCACTCGAGCGC+GGG + chr8.3:79971637-79971656 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 79970821 79972733 79970821 ID=MS.gene39687
chr8.3 mRNA 79970821 79972733 79970821 ID=MS.gene39687.t1;Parent=MS.gene39687
chr8.3 exon 79972198 79972733 79972198 ID=MS.gene39687.t1.exon1;Parent=MS.gene39687.t1
chr8.3 CDS 79972198 79972733 79972198 ID=cds.MS.gene39687.t1;Parent=MS.gene39687.t1
chr8.3 exon 79971465 79971786 79971465 ID=MS.gene39687.t1.exon2;Parent=MS.gene39687.t1
chr8.3 CDS 79971465 79971786 79971465 ID=cds.MS.gene39687.t1;Parent=MS.gene39687.t1
chr8.3 exon 79970821 79971081 79970821 ID=MS.gene39687.t1.exon3;Parent=MS.gene39687.t1
chr8.3 CDS 79970821 79971081 79970821 ID=cds.MS.gene39687.t1;Parent=MS.gene39687.t1
Gene Sequence

>MS.gene39687

ATGGAAATCTCTAAAAACAATGAAGTTTCATTGACAACAAAACATTACTATGATAGAGCAAGTGAGCTCAAAGCATTTGATGAAACAAAAGATGGTGTTAAAGGACTTGTTGATGCTTCTGTCACAAGCATCCCTCGCATGTTCCATCACGAATTCGACAAGGACTCACCTTCAAGCAACAGCACCAAACTTGTTGTTCCTTCTGTTGATCTTGTTGATATTCATCAAGATCCAACAAGAAGGAAAATAGTTGTTGAGAAAATTAGAGAAGCATCTGAGACATGGGGTTTCTTTCAAGTTGTTAATCATGGTATAGAAGTGAGTGTTTTGGATGAGATGAAGAATGGAGTGGTTAGATTCTTTGAGCAAGATTCTGAGGTGAAAAGAGAATTATACACACGTGATCCGGTGAAGCCTTTGGTTTATAATAGTAATTTTGATCTTTATAGTTCACCGGCTGCTAATTGGAGGGATACCTTTTACTGTTTTATGGCTCCGAAGTCTCCCAATCCGGAAGATTTACCATCAGTATGCAGGTATGATAGATGTAATATATAATTTTATTAGATTAACTCTTGCATGAGCATAGTGATTATTGGAAAAAATAAGATATCATGACTGTGGCACAATCCTTAATATTCCAAAGAATTATAGTCAAATGAGATTATACCGCCTTAACTACAGTCGCGAAAACATTGAAAACTTTGATGCGGTGGCCAAGATTGTGGTTGGTTAGGATTAGTGAAGAAATTATTTTGATACTATCTTGAATTTATCTGGCTATGAATATACAAGATTATCCCTAAATTATGTCCCGCGCTCGAGTGACTCACCCACTTATCAGTAACCTATGAACCACATTCAATCATATTATATCATATCTTTGTAGTAGATTTTGATAATAGTTGTGATTAAAGCTTTAGGATATTATGTGCATATGCTTGCAGAGATATAATGCTGGAATACACAAAACATGTTATGAAACTTGGAAATGTATTGTTTGAGTTATTATCAGAAGCACTTGGACTTGATCCAAACTATTTAAATGATATGAGATGCAATGAGGGGATTGCACTTGTTTGCCATTACTATCCTTCGTGTCCTGAACCTGACTTGACTTTGGGAGCAACCAAACATACTGATAATGACTTTATCACCGTGCTTCTACAAGATCATATTGGAGGCCTCCAAGTTCTTCATGAAAATCGGTGGGTTGATGTATCGCCTGTTCCTGGTGCTCTAGTCATTAACATTGGTGATCTTCTACAGGTAAGTTTTGATCTTTTGATTGTGATCTTAATATTCATGCCTTTCTTATCCTGTCATTTAAAAAAATTTAATATCTATAACCTAACGGCATAAACAGGTTTTATGCACGCTTTTAAGTTATAATCATTTTCATCGGGATTTAATTGATATACACCGACAGAGTAATTTTCATCGTTGGATTGTTAAAGGAACTTGACTCTAATTCTATTTATTTACTTTGAAAATCATATAAAGTATTGTTTGTGATTGGTTGAAAGTGTAAAAAGTGTTACACTGACTGTGCATAAAAATTATTCTCATTCCACAGTCTTGTGTTGTCACCTTGTAAAATTTGACATTCGGATTTTCTCTATTTAACTAATCAACAATTTTCATTGAAACAGCTTATTACAAATGACAAATTCAAGAGTGTTGAGCACAGAGTGGTGGCAAACCATGTCGGTCCAAGAGTATCGGTTGCAAGCTTTTATAGCACAAGTTTTCAGCCATCAACAAAGCTTTATGGTCCTATAAAGGAATTAGTATCAGAAGATAATCCTCCAAAGTATAGGGAAACAACAGTGCATGATTATGTTTCTTTCTCCATGGCAAGAGGCCTTGATGGAACTTCTCCTTTGCCATATTTCAAAATTGGAAATTTCTGA
Protein sequence

>MS.gene39687.t1

MEISKNNEVSLTTKHYYDRASELKAFDETKDGVKGLVDASVTSIPRMFHHEFDKDSPSSNSTKLVVPSVDLVDIHQDPTRRKIVVEKIREASETWGFFQVVNHGIEVSVLDEMKNGVVRFFEQDSEVKRELYTRDPVKPLVYNSNFDLYSSPAANWRDTFYCFMAPKSPNPEDLPSVCRDIMLEYTKHVMKLGNVLFELLSEALGLDPNYLNDMRCNEGIALVCHYYPSCPEPDLTLGATKHTDNDFITVLLQDHIGGLQVLHENRWVDVSPVPGALVINIGDLLQLITNDKFKSVEHRVVANHVGPRVSVASFYSTSFQPSTKLYGPIKELVSEDNPPKYRETTVHDYVSFSMARGLDGTSPLPYFKIGNF