AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022676

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022676.t1 MTR_8g009080 93.048 374 24 1 1 372 27 400 0.0 717
MS.gene022676.t1 MTR_8g009080 91.667 288 22 1 1 286 27 314 0.0 548
MS.gene022676.t1 MTR_8g009080 91.579 285 22 1 1 283 27 311 0.0 541
MS.gene022676.t1 MTR_2g069210 66.384 354 117 1 18 369 14 367 0.0 508
MS.gene022676.t1 MTR_8g009160 64.444 360 125 3 12 369 6 364 7.94e-180 503
MS.gene022676.t1 MTR_2g069190 63.342 371 134 1 1 369 1 371 1.15e-178 501
MS.gene022676.t1 MTR_8g028435 64.571 350 122 2 21 369 16 364 1.24e-176 495
MS.gene022676.t1 MTR_8g009090 64.167 360 126 3 12 369 6 364 8.32e-176 493
MS.gene022676.t1 MTR_8g008930 63.989 361 126 4 12 369 6 365 4.15e-174 489
MS.gene022676.t1 MTR_2g069090 61.559 372 140 2 1 369 1 372 9.93e-174 488
MS.gene022676.t1 MTR_8g009110 63.533 351 125 3 21 369 16 365 1.92e-173 487
MS.gene022676.t1 MTR_2g069300 60.224 357 139 2 16 369 2 358 3.85e-168 474
MS.gene022676.t1 MTR_8g009170 61.602 362 134 5 12 369 6 366 1.16e-167 473
MS.gene022676.t1 MTR_1g043770 62.216 352 132 1 18 369 5 355 1.56e-165 467
MS.gene022676.t1 MTR_4g117880 59.669 362 141 5 12 369 6 366 7.86e-160 453
MS.gene022676.t1 MTR_1g043775 61.236 356 135 3 16 369 3 357 1.15e-159 452
MS.gene022676.t1 MTR_1g043810 59.831 356 140 3 16 369 3 357 7.55e-156 442
MS.gene022676.t1 MTR_8g041620 54.891 368 161 3 8 370 8 375 2.53e-152 434
MS.gene022676.t1 MTR_1g043760 59.040 354 143 2 16 368 3 355 5.10e-152 432
MS.gene022676.t1 MTR_8g009150 57.835 351 125 4 21 369 16 345 7.64e-151 429
MS.gene022676.t1 MTR_8g041600 53.804 368 165 3 8 370 8 375 2.23e-149 427
MS.gene022676.t1 MTR_2g069010 55.801 362 152 3 17 371 17 377 3.30e-149 426
MS.gene022676.t1 MTR_1g093120 54.011 374 163 3 1 369 1 370 1.31e-147 422
MS.gene022676.t1 MTR_7g056347 52.547 373 173 2 1 369 1 373 1.48e-144 414
MS.gene022676.t1 MTR_8g009120 56.980 351 136 5 21 369 16 353 1.75e-144 413
MS.gene022676.t1 MTR_8g063070 53.083 373 171 2 1 369 1 373 4.12e-143 410
MS.gene022676.t1 MTR_2g069060 52.304 369 156 3 1 369 1 349 1.29e-140 404
MS.gene022676.t1 MTR_1g093140 51.697 383 166 5 1 369 1 378 2.23e-140 404
MS.gene022676.t1 MTR_0032s0040 51.697 383 165 5 1 371 1 375 7.07e-139 400
MS.gene022676.t1 MTR_2g068950 53.611 360 159 3 17 369 11 369 1.46e-138 399
MS.gene022676.t1 MTR_1g093110 52.186 366 167 3 12 369 9 374 2.10e-138 399
MS.gene022676.t1 MTR_2g068960 52.778 360 162 3 17 369 11 369 1.35e-136 394
MS.gene022676.t1 MTR_2g069020 54.046 346 155 2 17 358 15 360 1.52e-136 394
MS.gene022676.t1 MTR_8g006930 52.000 375 172 3 1 369 1 373 1.90e-136 394
MS.gene022676.t1 MTR_2g069020 54.046 346 155 2 17 358 15 360 4.45e-136 394
MS.gene022676.t1 MTR_4g119410 52.011 373 175 2 1 369 1 373 6.81e-136 392
MS.gene022676.t1 MTR_4g024660 50.134 373 182 2 1 369 1 373 7.27e-135 390
MS.gene022676.t1 MTR_8g062600 50.938 373 179 2 1 369 1 373 1.21e-134 389
MS.gene022676.t1 MTR_7g078010 50.938 373 179 2 1 369 1 373 5.22e-133 385
MS.gene022676.t1 MTR_7g056393 51.206 373 178 2 1 369 1 373 1.61e-132 384
MS.gene022676.t1 MTR_7g029655 49.728 368 173 5 13 371 8 372 2.35e-131 381
MS.gene022676.t1 MTR_8g469400 49.866 373 170 4 1 369 1 360 2.38e-128 373
MS.gene022676.t1 MTR_1g070185 50.000 356 171 3 16 369 17 367 1.81e-125 365
MS.gene022676.t1 MTR_1g043770 62.454 269 100 1 18 286 5 272 3.70e-122 355
MS.gene022676.t1 MTR_8g009170 59.353 278 109 4 12 286 6 282 9.52e-122 353
MS.gene022676.t1 MTR_1g043775 59.589 292 114 4 16 304 3 293 1.11e-120 351
MS.gene022676.t1 MTR_1g043810 61.538 273 102 3 16 286 3 274 7.81e-120 350
MS.gene022676.t1 MTR_8g041600 53.521 284 128 2 8 287 8 291 1.56e-114 336
MS.gene022676.t1 MTR_8g009180 62.097 248 78 4 138 369 47 294 7.79e-111 326
MS.gene022676.t1 MTR_7g056353 46.648 358 161 4 14 368 16 346 5.48e-104 316
MS.gene022676.t1 MTR_7g078010 52.083 288 137 1 1 287 1 288 1.01e-103 308
MS.gene022676.t1 MTR_7g105070 41.620 358 205 3 17 371 8 364 4.15e-102 306
MS.gene022676.t1 MTR_2g069060 54.251 247 110 1 44 287 2 248 6.09e-98 291
MS.gene022676.t1 MTR_1g032140 42.857 364 199 4 9 368 6 364 3.38e-91 278
MS.gene022676.t1 MTR_1g032220 41.854 356 198 5 17 368 21 371 1.11e-90 277
MS.gene022676.t1 MTR_1g032250 40.730 356 202 4 17 368 21 371 5.20e-87 268
MS.gene022676.t1 MTR_1g043840 52.660 188 84 2 180 363 50 236 1.24e-66 214
MS.gene022676.t1 MTR_1g043840 61.842 76 28 1 74 149 254 328 4.85e-24 101
MS.gene022676.t1 MTR_7g068650 35.593 354 209 8 24 362 6 355 2.92e-62 204
MS.gene022676.t1 MTR_1g044105 57.059 170 65 3 16 178 3 171 4.36e-59 189
MS.gene022676.t1 MTR_4g015790 33.520 358 202 8 33 362 14 363 8.71e-59 195
MS.gene022676.t1 MTR_5g065010 33.981 309 196 6 65 369 38 342 1.03e-58 194
MS.gene022676.t1 MTR_3g092890 36.129 310 180 6 66 368 38 336 2.17e-58 193
MS.gene022676.t1 MTR_5g082750 34.897 341 206 7 33 362 14 349 2.38e-56 188
MS.gene022676.t1 MTR_8g024120 33.442 308 195 4 66 369 42 343 4.66e-56 187
MS.gene022676.t1 MTR_2g068840 33.618 351 212 7 31 369 20 361 5.59e-56 187
MS.gene022676.t1 MTR_5g055690 29.565 345 229 6 33 370 13 350 1.39e-53 181
MS.gene022676.t1 MTR_1g070120 35.548 301 176 9 57 351 33 321 6.68e-53 179
MS.gene022676.t1 MTR_1g070135 35.333 300 180 8 66 359 38 329 1.48e-52 178
MS.gene022676.t1 MTR_7g056370 48.352 182 93 1 27 207 6 187 1.80e-52 174
MS.gene022676.t1 MTR_6g015950 34.591 318 186 8 42 349 14 319 9.75e-52 176
MS.gene022676.t1 MTR_5g048850 28.198 344 236 6 33 371 13 350 1.69e-51 175
MS.gene022676.t1 MTR_0009s0050 28.902 346 233 7 32 371 12 350 3.33e-51 174
MS.gene022676.t1 MTR_0009s0050 28.902 346 233 7 32 371 12 350 4.23e-51 174
MS.gene022676.t1 MTR_5g055820 29.480 346 228 8 33 370 13 350 6.30e-51 174
MS.gene022676.t1 MTR_1g070085 34.641 306 177 9 65 359 36 329 1.94e-50 172
MS.gene022676.t1 MTR_1g070085 34.641 306 177 9 65 359 36 329 1.94e-50 172
MS.gene022676.t1 MTR_3g063180 32.353 340 212 10 33 360 10 343 4.40e-50 172
MS.gene022676.t1 MTR_2g072890 28.739 341 230 9 38 371 23 357 8.34e-50 171
MS.gene022676.t1 MTR_2g072910 28.161 348 235 9 32 371 16 356 3.32e-49 169
MS.gene022676.t1 MTR_5g048570 28.653 349 228 10 32 371 12 348 3.50e-49 169
MS.gene022676.t1 MTR_5g048740 30.058 346 228 7 33 371 11 349 4.39e-49 169
MS.gene022676.t1 MTR_1g034140 34.516 310 176 7 61 351 19 320 5.66e-49 168
MS.gene022676.t1 MTR_0328s0030 29.446 343 229 7 33 369 11 346 9.16e-49 168
MS.gene022676.t1 MTR_8g064200 29.290 338 219 8 33 360 18 345 1.07e-48 168
MS.gene022676.t1 MTR_5g032870 35.088 285 173 5 66 342 38 318 1.35e-48 167
MS.gene022676.t1 MTR_8g064200 29.290 338 219 8 33 360 23 350 1.45e-48 168
MS.gene022676.t1 MTR_4g087110 34.219 301 167 9 66 342 26 319 5.55e-48 166
MS.gene022676.t1 MTR_5g055680 30.650 323 204 7 58 371 39 350 6.63e-48 166
MS.gene022676.t1 MTR_7g102720 33.106 293 182 4 84 369 50 335 1.00e-47 165
MS.gene022676.t1 MTR_3g045230 30.659 349 222 7 31 369 16 354 1.13e-47 165
MS.gene022676.t1 MTR_5g048550 28.161 348 231 7 33 371 13 350 1.90e-47 165
MS.gene022676.t1 MTR_3g070860 30.938 320 207 7 58 368 42 356 2.94e-47 164
MS.gene022676.t1 MTR_5g048470 29.290 338 222 8 32 360 17 346 4.15e-47 164
MS.gene022676.t1 MTR_1g034120 33.775 302 169 7 66 342 26 321 7.36e-47 163
MS.gene022676.t1 MTR_4g093840 32.372 312 196 9 66 369 62 366 8.02e-47 163
MS.gene022676.t1 MTR_1g062110 31.454 337 209 8 32 352 26 356 8.12e-47 164
MS.gene022676.t1 MTR_5g055900 29.395 347 228 9 32 370 12 349 9.63e-47 163
MS.gene022676.t1 MTR_0009s0480 29.191 346 230 8 33 371 12 349 9.91e-47 163
MS.gene022676.t1 MTR_1g034060 33.444 302 170 7 66 342 26 321 2.99e-46 161
MS.gene022676.t1 MTR_2g068800 32.028 281 158 5 31 301 20 277 3.78e-46 159
MS.gene022676.t1 MTR_8g008960 94.805 77 4 0 296 372 29 105 5.01e-46 153
MS.gene022676.t1 MTR_2g069070 43.017 179 85 1 1 179 1 162 5.30e-46 156
MS.gene022676.t1 MTR_4g099380 46.821 173 83 3 10 179 116 282 9.54e-46 158
MS.gene022676.t1 MTR_2g025120 32.680 306 184 8 67 363 5 297 9.66e-46 159
MS.gene022676.t1 MTR_7g102820 31.494 308 191 5 64 356 65 367 1.07e-45 161
MS.gene022676.t1 MTR_4g087100 33.113 302 169 9 66 342 26 319 1.27e-45 160
MS.gene022676.t1 MTR_8g075890 34.686 271 167 5 66 330 39 305 2.56e-45 159
MS.gene022676.t1 MTR_7g016090 32.710 321 183 8 61 370 34 332 2.98e-45 158
MS.gene022676.t1 MTR_7g016090 32.710 321 183 8 61 370 36 334 3.40e-45 158
MS.gene022676.t1 MTR_2g437380 32.534 292 187 4 85 370 70 357 3.57e-45 159
MS.gene022676.t1 MTR_3g091350 28.529 340 225 8 33 359 23 357 3.62e-45 159
MS.gene022676.t1 MTR_1g033810 29.518 332 219 8 28 349 4 330 3.69e-45 159
MS.gene022676.t1 MTR_5g032880 34.909 275 167 5 84 350 48 318 1.78e-44 163
MS.gene022676.t1 MTR_5g032880 34.386 285 175 5 66 342 376 656 8.14e-43 158
MS.gene022676.t1 MTR_7g081710 31.804 327 204 8 36 352 17 334 3.90e-44 156
MS.gene022676.t1 MTR_3g083370 35.135 296 166 10 67 352 5 284 6.00e-44 154
MS.gene022676.t1 MTR_3g043900 30.372 349 222 8 31 369 16 353 6.27e-44 155
MS.gene022676.t1 MTR_5g055800 27.536 345 236 7 33 371 13 349 7.00e-44 155
MS.gene022676.t1 MTR_5g059130 31.902 326 193 10 40 350 16 327 9.10e-44 154
MS.gene022676.t1 MTR_3g058610 34.884 258 155 4 66 314 39 292 9.76e-44 155
MS.gene022676.t1 MTR_8g075830 34.307 274 164 6 66 330 39 305 1.25e-43 155
MS.gene022676.t1 MTR_1g070080 32.765 293 179 7 66 350 38 320 1.77e-43 154
MS.gene022676.t1 MTR_5g085330 33.333 294 174 8 81 363 18 300 2.00e-43 153
MS.gene022676.t1 MTR_1g048940 31.190 311 200 8 69 371 48 352 2.97e-43 154
MS.gene022676.t1 MTR_7g063730 30.690 290 190 6 87 370 82 366 3.15e-43 154
MS.gene022676.t1 MTR_3g072820 31.657 338 214 11 28 356 2 331 7.39e-43 152
MS.gene022676.t1 MTR_3g091360 30.368 326 210 9 37 350 15 335 8.83e-43 152
MS.gene022676.t1 MTR_7g062580 31.655 278 181 5 87 359 73 346 1.65e-42 152
MS.gene022676.t1 MTR_5g022020 33.077 260 165 4 66 318 39 296 2.85e-42 151
MS.gene022676.t1 MTR_4g087140 31.250 288 170 7 76 342 40 320 5.82e-42 150
MS.gene022676.t1 MTR_4g087120 31.126 302 175 8 66 342 26 319 6.25e-42 150
MS.gene022676.t1 MTR_4g087090 30.435 322 184 11 61 356 22 329 6.93e-42 150
MS.gene022676.t1 MTR_7g062570 30.584 291 193 4 85 370 71 357 2.07e-41 149
MS.gene022676.t1 MTR_2g083030 30.822 292 176 6 66 349 37 310 3.06e-41 148
MS.gene022676.t1 MTR_5g059140 32.797 311 186 11 42 339 16 316 5.60e-41 147
MS.gene022676.t1 MTR_3g117420 30.058 346 212 8 30 369 33 354 1.71e-40 146
MS.gene022676.t1 MTR_2g102570 33.022 321 179 11 48 351 34 335 2.87e-40 146
MS.gene022676.t1 MTR_1g070135 36.123 227 136 6 66 287 38 260 4.63e-40 143
MS.gene022676.t1 MTR_8g074050 30.982 326 204 8 54 369 40 354 7.28e-40 145
MS.gene022676.t1 MTR_2g083000 30.435 299 191 5 59 354 26 310 8.17e-40 144
MS.gene022676.t1 MTR_1g070085 33.603 247 149 5 121 359 12 251 1.75e-39 141
MS.gene022676.t1 MTR_5g011250 30.263 304 193 8 66 356 47 344 2.00e-39 144
MS.gene022676.t1 MTR_7g062550 30.796 289 191 4 87 370 78 362 2.38e-39 144
MS.gene022676.t1 MTR_7g062600 30.389 283 185 6 87 362 69 346 4.54e-39 143
MS.gene022676.t1 MTR_7g016080 32.423 293 162 9 61 341 36 304 5.88e-39 142
MS.gene022676.t1 MTR_3g088565 32.000 300 180 10 64 351 1 288 1.08e-38 140
MS.gene022676.t1 MTR_8g074070 30.368 326 206 8 54 369 40 354 1.25e-38 141
MS.gene022676.t1 MTR_1g070100 34.310 239 142 5 121 351 8 239 1.56e-38 139
MS.gene022676.t1 MTR_5g055690 30.038 263 173 5 32 287 12 270 1.16e-37 137
MS.gene022676.t1 MTR_7g062560 27.778 288 195 4 87 372 80 356 1.59e-37 139
MS.gene022676.t1 MTR_0009s0050 31.674 221 143 4 156 371 35 252 1.82e-37 135
MS.gene022676.t1 MTR_0009s0050 31.674 221 143 4 156 371 35 252 2.18e-37 135
MS.gene022676.t1 MTR_4g074130 30.612 294 175 9 66 349 40 314 1.10e-36 136
MS.gene022676.t1 MTR_5g005570 31.544 298 178 7 35 318 2 287 6.33e-36 134
MS.gene022676.t1 MTR_2g437380 32.129 249 160 3 128 370 18 263 7.01e-36 132
MS.gene022676.t1 MTR_0056s0160 33.032 221 140 4 156 371 18 235 7.40e-36 131
MS.gene022676.t1 MTR_7g451860 30.034 293 179 6 66 349 41 316 8.82e-36 133
MS.gene022676.t1 MTR_7g047670 30.034 293 179 6 66 349 41 316 8.82e-36 133
MS.gene022676.t1 MTR_3g072810 31.667 300 175 8 64 349 38 321 1.45e-35 132
MS.gene022676.t1 MTR_3g026150 30.195 308 202 8 57 359 52 351 1.84e-35 133
MS.gene022676.t1 MTR_0009s0050 34.104 173 110 2 200 371 1 170 8.80e-35 126
MS.gene022676.t1 MTR_1g011580 29.206 315 182 11 65 364 62 350 1.27e-34 130
MS.gene022676.t1 MTR_3g040410 30.033 303 184 11 65 354 5 292 1.74e-34 129
MS.gene022676.t1 MTR_6g464620 29.653 317 199 5 53 353 51 359 2.21e-34 130
MS.gene022676.t1 MTR_1g081840 31.707 287 169 8 84 353 72 348 2.82e-34 130
MS.gene022676.t1 MTR_4g116010 30.565 301 190 9 56 349 40 328 2.99e-34 129
MS.gene022676.t1 MTR_6g092620 29.032 279 174 10 64 328 1 269 3.37e-34 128
MS.gene022676.t1 MTR_8g074070 29.560 318 200 8 54 369 40 335 3.93e-34 129
MS.gene022676.t1 MTR_0009s0480 29.167 264 176 7 33 290 12 270 6.39e-33 124
MS.gene022676.t1 MTR_7g045650 31.557 244 159 4 87 325 78 318 9.00e-33 125
MS.gene022676.t1 MTR_5g048850 27.969 261 180 5 33 288 13 270 1.49e-32 123
MS.gene022676.t1 MTR_4g087130 30.132 302 177 8 66 342 26 318 1.71e-32 125
MS.gene022676.t1 MTR_1g102070 29.598 348 215 8 27 353 16 354 2.44e-32 125
MS.gene022676.t1 MTR_1g062110 30.882 272 169 7 32 287 26 294 2.52e-32 124
MS.gene022676.t1 MTR_3g464530 29.389 262 156 8 66 314 34 279 3.21e-32 124
MS.gene022676.t1 MTR_3g117485 33.333 279 161 10 85 350 69 335 3.52e-32 124
MS.gene022676.t1 MTR_3g096500 27.358 318 200 4 63 353 48 361 5.89e-31 121
MS.gene022676.t1 MTR_2g025120 31.878 229 138 6 67 287 5 223 8.41e-31 117
MS.gene022676.t1 MTR_8g033380 28.746 327 215 6 39 353 28 348 5.95e-30 118
MS.gene022676.t1 MTR_3g088745 29.373 303 198 6 63 353 33 331 1.15e-29 117
MS.gene022676.t1 MTR_6g088665 28.923 325 196 12 53 351 7 322 1.37e-29 117
MS.gene022676.t1 MTR_8g093930 26.648 364 240 9 20 367 2 354 1.81e-29 117
MS.gene022676.t1 MTR_6g088665 29.268 328 192 13 53 351 7 323 2.71e-29 116
MS.gene022676.t1 MTR_7g077670 31.136 273 171 8 90 352 30 295 7.00e-29 114
MS.gene022676.t1 MTR_3g117485 33.585 265 151 10 98 349 10 262 7.54e-29 113
MS.gene022676.t1 MTR_3g083370 32.751 229 136 7 67 287 5 223 8.41e-29 112
MS.gene022676.t1 MTR_1g032240 40.260 154 82 2 164 316 1 145 1.94e-28 109
MS.gene022676.t1 MTR_4g123020 28.344 314 206 9 56 357 5 311 2.64e-28 113
MS.gene022676.t1 MTR_2g019370 28.274 336 189 11 41 349 3 313 4.35e-28 112
MS.gene022676.t1 MTR_5g027230 28.435 313 181 11 62 356 2 289 3.23e-27 109
MS.gene022676.t1 MTR_2g072910 26.217 267 185 8 32 290 16 278 3.63e-27 108
MS.gene022676.t1 MTR_8g030880 30.921 304 178 12 67 352 6 295 7.57e-27 108
MS.gene022676.t1 MTR_0009s0400 33.108 148 95 2 225 371 2 146 1.01e-26 104
MS.gene022676.t1 MTR_3g026150 28.968 252 170 5 113 359 1 248 1.10e-26 107
MS.gene022676.t1 MTR_8g102600 28.276 290 181 7 85 351 26 311 1.20e-26 108
MS.gene022676.t1 MTR_1g027290 27.273 319 208 10 66 369 29 338 5.55e-26 107
MS.gene022676.t1 MTR_1g086550 27.434 339 202 12 59 370 12 333 2.77e-25 105
MS.gene022676.t1 MTR_5g025050 27.000 300 190 9 65 355 4 283 3.08e-25 104
MS.gene022676.t1 MTR_2g070870 26.797 306 173 10 68 349 27 305 3.21e-25 104
MS.gene022676.t1 MTR_3g464530 28.085 235 140 8 66 287 34 252 4.68e-25 102
MS.gene022676.t1 MTR_4g132770 50.549 91 44 1 227 316 32 122 4.72e-25 100
MS.gene022676.t1 MTR_2g033270 27.306 271 175 8 56 314 5 265 5.20e-25 103
MS.gene022676.t1 MTR_8g461330 26.299 308 182 12 66 349 27 313 4.93e-24 101
MS.gene022676.t1 MTR_8g093980 26.351 296 197 5 59 341 52 339 6.21e-24 102
MS.gene022676.t1 MTR_1g070110 29.528 254 126 8 110 347 1 217 2.06e-23 97.8
MS.gene022676.t1 MTR_3g026150 29.237 236 157 6 57 287 52 282 2.06e-23 99.0
MS.gene022676.t1 MTR_5g025090 25.697 323 191 10 66 369 5 297 2.14e-23 99.0
MS.gene022676.t1 MTR_4g115990 28.253 269 173 9 94 360 68 318 4.60e-22 95.9
MS.gene022676.t1 MTR_8g102600 31.818 198 122 5 163 351 68 261 5.48e-22 94.7
MS.gene022676.t1 MTR_5g024940 27.451 306 168 11 62 355 2 265 1.12e-21 94.0
MS.gene022676.t1 MTR_5g025060 25.517 290 176 9 62 349 2 253 2.49e-20 90.1
MS.gene022676.t1 MTR_4g100600 26.837 313 196 11 59 351 2 301 4.77e-20 90.1
MS.gene022676.t1 MTR_4g099390 45.238 84 44 1 288 369 1 84 7.30e-19 80.9
MS.gene022676.t1 MTR_4g096840 26.230 305 184 12 66 349 29 313 1.14e-18 86.3
MS.gene022676.t1 MTR_1g027310 24.919 309 186 9 66 369 49 316 2.46e-18 85.1
MS.gene022676.t1 MTR_2g069130 39.535 129 66 4 70 195 12 131 5.90e-17 77.0
MS.gene022676.t1 MTR_4g100590 26.333 300 192 11 68 349 6 294 2.03e-16 79.7
MS.gene022676.t1 MTR_7g084360 33.529 170 63 3 177 342 7 130 2.02e-15 72.8
MS.gene022676.t1 MTR_3g040440 46.875 64 34 0 237 300 15 78 9.83e-15 73.9
MS.gene022676.t1 MTR_4g100590 29.586 169 103 6 189 349 87 247 1.35e-12 67.8
MS.gene022676.t1 MTR_1g032230 30.714 140 72 2 17 153 15 132 1.41e-12 67.8
MS.gene022676.t1 MTR_4g011720 24.855 173 125 5 185 356 131 299 2.04e-12 67.8
MS.gene022676.t1 MTR_3g108520 21.173 307 219 7 61 352 2 300 6.57e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022676.t1 AT1G06620 58.082 365 149 2 8 369 2 365 1.90e-159 452
MS.gene022676.t1 AT5G59540 57.382 359 148 3 16 369 8 366 1.38e-158 450
MS.gene022676.t1 AT1G06650 59.444 360 139 3 17 369 10 369 1.93e-158 449
MS.gene022676.t1 AT1G06640 57.500 360 146 3 17 369 10 369 3.21e-153 436
MS.gene022676.t1 AT5G59530 56.704 358 151 4 16 369 7 364 3.44e-151 431
MS.gene022676.t1 AT2G30840 58.774 359 141 4 17 369 5 362 2.56e-150 429
MS.gene022676.t1 AT1G04350 55.710 359 151 4 16 369 5 360 2.88e-149 426
MS.gene022676.t1 AT2G30830 56.180 356 153 3 16 369 4 358 2.01e-148 424
MS.gene022676.t1 AT1G06645 57.222 360 144 5 17 369 23 379 2.13e-148 424
MS.gene022676.t1 AT2G30840 57.660 359 139 5 17 369 5 356 3.26e-144 413
MS.gene022676.t1 AT1G04380 52.691 353 151 2 17 369 9 345 4.21e-141 405
MS.gene022676.t1 AT5G43440 53.782 357 158 4 19 369 10 365 2.15e-140 404
MS.gene022676.t1 AT1G03410 57.101 338 139 3 18 349 5 342 1.13e-138 399
MS.gene022676.t1 AT1G03410 57.101 338 139 3 18 349 42 379 4.00e-138 399
MS.gene022676.t1 AT2G25450 52.661 357 165 4 16 369 4 359 2.20e-137 395
MS.gene022676.t1 AT5G43450 53.652 356 159 3 18 369 9 362 1.74e-136 394
MS.gene022676.t1 AT3G61400 48.895 362 165 6 18 364 10 366 3.93e-127 370
MS.gene022676.t1 AT1G03400 50.970 361 154 5 18 369 5 351 9.49e-126 366
MS.gene022676.t1 AT1G06620 57.801 282 115 2 8 286 2 282 6.50e-120 348
MS.gene022676.t1 AT1G03400 47.301 389 154 6 18 369 5 379 3.38e-119 350
MS.gene022676.t1 AT5G59540 55.957 277 117 3 16 287 8 284 3.77e-117 342
MS.gene022676.t1 AT1G06650 58.123 277 110 2 17 287 10 286 4.78e-117 342
MS.gene022676.t1 AT1G06640 56.884 276 113 2 17 286 10 285 1.84e-115 338
MS.gene022676.t1 AT2G30840 57.818 275 111 2 17 286 5 279 3.08e-115 337
MS.gene022676.t1 AT1G06640 56.318 277 115 2 17 287 10 286 1.99e-114 335
MS.gene022676.t1 AT5G43440 53.650 274 120 4 19 286 10 282 3.57e-107 316
MS.gene022676.t1 AT5G43450 54.286 280 122 3 18 293 9 286 1.53e-106 315
MS.gene022676.t1 AT1G04380 51.292 271 116 2 17 287 9 263 6.14e-102 302
MS.gene022676.t1 AT3G61400 48.239 284 128 5 18 287 10 288 3.66e-96 288
MS.gene022676.t1 AT3G12900 36.416 346 206 9 31 370 20 357 6.05e-66 213
MS.gene022676.t1 AT3G13610 33.333 351 208 8 31 369 25 361 7.63e-62 202
MS.gene022676.t1 AT4G10500 36.246 309 184 6 66 368 44 345 4.55e-60 197
MS.gene022676.t1 AT5G24530 36.755 302 183 5 71 367 40 338 1.13e-59 196
MS.gene022676.t1 AT1G55290 32.682 358 202 9 31 369 24 361 1.80e-57 191
MS.gene022676.t1 AT4G10490 33.766 308 194 5 66 368 42 344 7.33e-56 187
MS.gene022676.t1 AT2G38240 34.706 340 201 9 33 360 12 342 2.30e-55 186
MS.gene022676.t1 AT2G36690 33.728 338 208 8 30 356 18 350 6.05e-54 182
MS.gene022676.t1 AT2G36690 33.728 338 208 8 30 356 18 350 6.05e-54 182
MS.gene022676.t1 AT4G25310 34.932 292 175 8 85 369 70 353 1.03e-51 176
MS.gene022676.t1 AT3G19000 35.667 300 162 8 66 343 32 322 2.04e-51 175
MS.gene022676.t1 AT5G05600 31.412 347 210 9 33 362 27 362 2.49e-51 176
MS.gene022676.t1 AT3G11180 36.111 288 165 7 86 362 112 391 3.24e-51 176
MS.gene022676.t1 AT4G25300 33.562 292 182 7 85 369 70 356 6.02e-51 174
MS.gene022676.t1 AT3G11180 36.042 283 162 7 86 357 112 386 1.83e-50 174
MS.gene022676.t1 AT1G17020 30.994 342 220 10 38 369 23 358 5.95e-50 171
MS.gene022676.t1 AT3G19010 36.149 296 163 7 66 342 28 316 2.03e-48 167
MS.gene022676.t1 AT3G19010 36.149 296 163 7 66 342 28 316 2.03e-48 167
MS.gene022676.t1 AT3G55970 31.471 340 214 9 33 357 14 349 3.98e-48 167
MS.gene022676.t1 AT1G17010 29.446 343 228 8 38 371 23 360 4.59e-48 167
MS.gene022676.t1 AT3G21420 32.113 355 222 10 31 371 15 364 2.52e-45 159
MS.gene022676.t1 AT4G16330 34.211 304 176 10 66 360 67 355 9.23e-45 158
MS.gene022676.t1 AT5G08640 33.106 293 179 7 65 349 42 325 1.04e-44 157
MS.gene022676.t1 AT5G08640 33.106 293 179 7 65 349 42 325 1.04e-44 157
MS.gene022676.t1 AT3G60290 31.894 301 196 4 56 352 42 337 3.11e-44 156
MS.gene022676.t1 AT2G44800 32.107 299 194 5 58 352 44 337 3.57e-44 156
MS.gene022676.t1 AT1G77330 32.558 301 174 9 64 350 1 286 6.15e-44 154
MS.gene022676.t1 AT3G51240 34.559 272 166 6 66 330 38 304 7.59e-44 155
MS.gene022676.t1 AT1G78550 30.690 290 192 4 85 369 71 356 8.15e-44 155
MS.gene022676.t1 AT1G05010 34.343 297 169 9 81 363 17 301 8.19e-44 154
MS.gene022676.t1 AT4G21200 31.579 323 180 9 57 358 28 330 2.02e-43 154
MS.gene022676.t1 AT4G22880 28.818 347 211 10 33 354 7 342 4.54e-41 148
MS.gene022676.t1 AT4G22880 28.818 347 211 10 33 354 7 342 4.54e-41 148
MS.gene022676.t1 AT4G22880 28.818 347 211 10 33 354 7 342 4.54e-41 148
MS.gene022676.t1 AT5G07480 30.195 308 199 7 56 352 34 336 2.10e-40 146
MS.gene022676.t1 AT3G19010 33.446 296 141 8 66 342 28 286 3.93e-40 144
MS.gene022676.t1 AT3G19000 33.730 252 139 7 66 295 32 277 1.20e-39 142
MS.gene022676.t1 AT1G78550 29.856 278 186 4 97 369 5 278 1.97e-39 142
MS.gene022676.t1 AT4G25420 31.429 315 195 6 53 353 48 355 2.06e-39 144
MS.gene022676.t1 AT1G12010 30.719 306 187 9 67 363 8 297 4.98e-39 142
MS.gene022676.t1 AT1G62380 32.542 295 174 10 67 352 8 286 5.89e-38 139
MS.gene022676.t1 AT5G12270 28.249 354 228 10 30 369 18 359 6.75e-38 140
MS.gene022676.t1 AT4G25310 31.271 291 159 9 85 369 70 325 2.11e-37 137
MS.gene022676.t1 AT5G63590 30.201 298 188 8 62 349 10 297 5.14e-37 136
MS.gene022676.t1 AT1G80330 30.822 292 165 10 84 352 59 336 3.77e-36 135
MS.gene022676.t1 AT5G20400 30.619 307 197 8 66 364 45 343 2.14e-35 132
MS.gene022676.t1 AT4G16330 35.238 210 125 4 155 360 47 249 1.10e-34 128
MS.gene022676.t1 AT1G15550 30.159 315 177 11 56 350 47 338 1.51e-34 130
MS.gene022676.t1 AT5G05600 28.676 272 169 8 33 287 27 290 2.67e-34 128
MS.gene022676.t1 AT4G25300 34.197 193 122 3 179 369 73 262 3.02e-34 127
MS.gene022676.t1 AT2G19590 30.216 278 171 10 63 328 8 274 3.55e-34 129
MS.gene022676.t1 AT3G51240 37.368 190 108 5 148 330 35 220 6.69e-34 127
MS.gene022676.t1 AT3G19010 33.607 244 139 6 66 290 28 267 2.21e-33 126
MS.gene022676.t1 AT5G63600 28.125 320 206 8 38 350 8 310 3.85e-33 126
MS.gene022676.t1 AT5G20550 29.642 307 201 8 66 364 45 344 6.02e-33 126
MS.gene022676.t1 AT1G80340 29.967 307 186 9 58 351 42 332 1.77e-32 125
MS.gene022676.t1 AT3G55970 29.630 270 174 8 33 287 14 282 2.86e-32 123
MS.gene022676.t1 AT5G63600 28.037 321 206 9 38 350 8 311 6.22e-32 123
MS.gene022676.t1 AT5G51810 29.167 312 202 5 53 353 50 353 7.86e-32 124
MS.gene022676.t1 AT5G54000 29.617 287 188 7 63 342 45 324 1.73e-31 122
MS.gene022676.t1 AT1G50960 27.152 302 205 7 51 349 25 314 3.02e-31 121
MS.gene022676.t1 AT4G25420 33.061 245 146 5 53 283 48 288 9.03e-31 119
MS.gene022676.t1 AT5G07200 27.628 333 221 7 36 353 29 356 9.99e-31 120
MS.gene022676.t1 AT1G60980 28.302 318 204 6 53 354 44 353 1.09e-30 120
MS.gene022676.t1 AT5G63595 32.941 255 129 9 67 310 26 249 3.61e-30 117
MS.gene022676.t1 AT4G21690 28.826 281 176 8 88 351 61 334 6.81e-29 115
MS.gene022676.t1 AT1G14130 28.939 311 189 10 64 362 7 297 6.99e-29 114
MS.gene022676.t1 AT1G49390 27.986 293 199 6 66 352 45 331 7.63e-29 115
MS.gene022676.t1 AT2G19590 31.687 243 145 9 98 328 26 259 8.48e-29 114
MS.gene022676.t1 AT1G78440 27.961 304 182 11 65 349 17 302 6.20e-27 109
MS.gene022676.t1 AT1G30040 28.417 278 179 8 87 351 44 314 7.78e-27 109
MS.gene022676.t1 AT5G54000 29.719 249 163 6 101 342 1 244 9.99e-27 107
MS.gene022676.t1 AT5G43935 28.904 301 162 13 66 350 19 283 1.44e-26 107
MS.gene022676.t1 AT1G14120 28.182 330 178 13 65 369 7 302 2.01e-26 107
MS.gene022676.t1 AT1G14120 28.182 330 178 13 65 369 7 302 2.01e-26 107
MS.gene022676.t1 AT1G14120 28.182 330 178 13 65 369 7 302 2.01e-26 107
MS.gene022676.t1 AT5G51810 30.120 249 158 4 53 290 50 293 6.49e-26 106
MS.gene022676.t1 AT5G07480 33.862 189 113 6 171 352 44 227 7.84e-26 104
MS.gene022676.t1 AT1G47990 28.053 303 187 11 60 344 4 293 1.65e-24 102
MS.gene022676.t1 AT1G44090 28.710 310 193 9 64 355 61 360 1.94e-24 103
MS.gene022676.t1 AT2G34555 25.545 321 182 10 56 349 17 307 1.15e-23 100
MS.gene022676.t1 AT5G63580 30.544 239 151 7 56 287 10 240 3.36e-23 97.4
MS.gene022676.t1 AT5G63580 30.802 237 149 7 56 285 10 238 3.58e-23 97.4
MS.gene022676.t1 AT3G47190 28.205 234 145 6 85 300 42 270 6.69e-23 98.6
MS.gene022676.t1 AT5G58660 29.502 261 149 9 86 314 45 302 6.74e-23 98.6
MS.gene022676.t1 AT1G49390 28.125 256 172 6 101 350 1 250 9.99e-23 96.7
MS.gene022676.t1 AT4G23340 29.137 278 168 8 91 352 30 294 2.16e-22 97.1
MS.gene022676.t1 AT4G23340 31.868 182 113 6 182 355 1 179 6.62e-19 84.7
MS.gene022676.t1 AT5G51310 25.862 290 178 9 88 352 22 299 1.30e-18 86.3
MS.gene022676.t1 AT1G02400 26.667 300 185 9 81 359 34 319 1.44e-18 85.9
MS.gene022676.t1 AT3G46490 25.080 311 201 10 66 351 14 317 1.50e-18 85.9
MS.gene022676.t1 AT3G49620 25.681 257 174 5 84 324 60 315 4.43e-18 85.1
MS.gene022676.t1 AT3G46500 26.367 311 200 12 61 351 9 310 4.57e-18 84.7
MS.gene022676.t1 AT3G50210 27.174 276 141 11 84 319 34 289 6.03e-18 84.3
MS.gene022676.t1 AT3G50210 27.174 276 141 11 84 319 34 289 6.03e-18 84.3
MS.gene022676.t1 AT3G50210 27.174 276 141 11 84 319 34 289 6.03e-18 84.3
MS.gene022676.t1 AT2G06960 34.559 136 72 3 221 356 27 145 2.02e-17 79.0
MS.gene022676.t1 AT3G46490 25.095 263 169 8 66 303 14 273 3.89e-17 81.6
MS.gene022676.t1 AT5G58660 27.468 233 135 8 86 287 45 274 4.58e-17 80.9
MS.gene022676.t1 AT3G49630 25.292 257 175 5 84 324 35 290 3.30e-16 79.3
MS.gene022676.t1 AT3G49630 25.292 257 175 5 84 324 31 286 3.63e-16 79.0
MS.gene022676.t1 AT1G30040 25.463 216 140 7 87 287 44 253 4.01e-16 78.2
MS.gene022676.t1 AT4G16765 29.630 243 142 12 127 350 4 236 4.91e-16 77.4
MS.gene022676.t1 AT4G16765 29.630 243 142 12 127 350 4 236 4.91e-16 77.4
MS.gene022676.t1 AT4G16765 29.630 243 142 12 127 350 4 236 4.91e-16 77.4
MS.gene022676.t1 AT4G16765 30.342 234 134 12 127 341 4 227 2.78e-15 75.1
MS.gene022676.t1 AT3G46500 29.557 203 127 8 158 351 41 236 1.08e-14 73.6
MS.gene022676.t1 AT3G46500 29.557 203 127 8 158 351 41 236 1.08e-14 73.6
MS.gene022676.t1 AT3G46500 26.415 265 166 11 61 303 9 266 1.26e-14 74.3
MS.gene022676.t1 AT3G50210 32.317 164 97 7 167 319 47 207 1.32e-13 70.5
MS.gene022676.t1 AT3G46500 28.492 179 114 6 182 351 1 174 2.14e-13 68.6
MS.gene022676.t1 AT3G49630 29.268 164 111 5 164 324 56 217 4.62e-13 68.9
MS.gene022676.t1 AT4G16765 29.570 186 108 9 127 294 4 184 1.54e-12 66.2
MS.gene022676.t1 AT1G35190 25.000 268 175 8 60 303 3 268 2.92e-12 67.4
MS.gene022676.t1 AT4G16765 33.884 121 69 4 236 350 75 190 3.03e-12 65.5
MS.gene022676.t1 AT3G46500 29.221 154 99 5 158 303 41 192 1.74e-11 63.9
MS.gene022676.t1 AT4G22870 31.000 100 65 2 256 354 2 98 2.50e-11 60.8
MS.gene022676.t1 AT4G16770 25.301 249 161 8 46 275 2 244 2.79e-11 63.9

Find 77 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCATCAACAAAGCTTTA+TGG 0.142502 8.4:-78829588 MS.gene022676:CDS
TCTGATACTAATTCCTTTAT+AGG 0.174461 8.4:+78829564 None:intergenic
CTCATATCATTTAAATAGTT+TGG 0.183791 8.4:+78830306 None:intergenic
CGGAGCCATAAAACAGTAAA+AGG 0.282997 8.4:+78830863 None:intergenic
ATAGTTCACCGGCTGCTAAT+TGG 0.293403 8.4:-78830893 MS.gene022676:CDS
GAAACAAAAGATGGTGTTAA+AGG 0.318707 8.4:-78831257 MS.gene022676:CDS
TCCATGGCAAGAGGCCTTGA+TGG 0.349251 8.4:-78829489 MS.gene022676:CDS
CCTGAACCTGACTTGACTTT+GGG 0.349949 8.4:-78830237 MS.gene022676:CDS
AAAGCTTTATGGACCTATAA+AGG 0.358235 8.4:-78829577 MS.gene022676:CDS
AAAGTCATTATCAGTATGTT+TGG 0.361760 8.4:+78830209 None:intergenic
GTTGATGTATCGCCTGTTCC+TGG 0.363452 8.4:-78830126 MS.gene022676:CDS
AAGATAATCCTCCAAAGTAT+AGG 0.371492 8.4:-78829542 MS.gene022676:CDS
TTCTTTCAAGTTGTTAATCA+TGG 0.373078 8.4:-78831050 MS.gene022676:CDS
AGATAATCCTCCAAAGTATA+GGG 0.390705 8.4:-78829541 MS.gene022676:CDS
CATACTGATGGTAAATCTTC+CGG 0.398989 8.4:+78830828 None:intergenic
CCCAAAGTCAAGTCAGGTTC+AGG 0.412335 8.4:+78830237 None:intergenic
GATGGTAAATCTTCCGGATT+GGG 0.414025 8.4:+78830834 None:intergenic
TCCTGAACCTGACTTGACTT+TGG 0.416245 8.4:-78830238 MS.gene022676:CDS
GGTCCATAAAGCTTTGTTGA+TGG 0.432082 8.4:+78829585 None:intergenic
AACAGAAGGAACAACAAGTT+TGG 0.432421 8.4:+78831154 None:intergenic
GTTGTTTCCCTATACTTTGG+AGG 0.436736 8.4:+78829534 None:intergenic
TCCGAGTTCTTCATGAAAAT+CGG 0.437795 8.4:-78830152 MS.gene022676:CDS
ACGTGATCCGGTGAAGCCTT+TGG 0.462405 8.4:-78830940 MS.gene022676:CDS
TGGTATAGAAGTGAGTGTTT+TGG 0.468631 8.4:-78831030 MS.gene022676:CDS
ACAAGACATGTTATGAAACT+TGG 0.468717 8.4:-78830372 MS.gene022676:CDS
GTTGCTCCCAAAGTCAAGTC+AGG 0.472155 8.4:+78830231 None:intergenic
GTGCTTCTACAAGATCATAT+TGG 0.473573 8.4:-78830180 MS.gene022676:CDS
ACTGTTGTTTCCCTATACTT+TGG 0.480633 8.4:+78829531 None:intergenic
ATGACTAGAGCACCAGGAAC+AGG 0.481185 8.4:+78830114 None:intergenic
TGATGGTAAATCTTCCGGAT+TGG 0.481996 8.4:+78830833 None:intergenic
GGCTCCGAAGTCTCCCAATC+CGG 0.497545 8.4:-78830847 MS.gene022676:CDS
TAACATTGGTGATCTTCTAC+AGG 0.501928 8.4:-78830091 MS.gene022676:intron
AAGCTTGCAACCGATACTCT+TGG 0.505153 8.4:+78829627 None:intergenic
TAGAGAAGCATCTGAGACAT+GGG 0.510313 8.4:-78831075 MS.gene022676:CDS
AGAATTATACACACGTGATC+CGG 0.515875 8.4:-78830952 MS.gene022676:CDS
AAGATTTACCATCAGTATGC+AGG 0.528722 8.4:-78830824 MS.gene022676:intron
TCCATCAAGGCCTCTTGCCA+TGG 0.529649 8.4:+78829488 None:intergenic
GGATTATGTTTCTTTCTCCA+TGG 0.531133 8.4:-78829505 MS.gene022676:CDS
TTATAAACCAAAGGCTTCAC+CGG 0.535396 8.4:+78830933 None:intergenic
AATGATATGAGATGCAATGA+GGG 0.539480 8.4:-78830294 MS.gene022676:CDS
GTTCACCGGCTGCTAATTGG+AGG 0.539887 8.4:-78830890 MS.gene022676:CDS
GTTTCTTTCTCCATGGCAAG+AGG 0.545237 8.4:-78829498 MS.gene022676:CDS
CCGATACTCTTGGACCGACA+TGG 0.550782 8.4:+78829637 None:intergenic
GTATAGGGAAACAACAGTGC+AGG 0.554541 8.4:-78829526 MS.gene022676:CDS
TCTTCCGGATTGGGAGACTT+CGG 0.566775 8.4:+78830843 None:intergenic
AGTTTGGTGCTGTTGCTTGA+AGG 0.569774 8.4:+78831170 None:intergenic
ATTCTTTGAGCAAGATTCTG+AGG 0.571145 8.4:-78830982 MS.gene022676:CDS
GCATTTGATGAAACAAAAGA+TGG 0.578666 8.4:-78831266 MS.gene022676:CDS
CCATGTCGGTCCAAGAGTAT+CGG 0.578969 8.4:-78829637 MS.gene022676:CDS
GAGTTCTTCATGAAAATCGG+TGG 0.582224 8.4:-78830149 MS.gene022676:CDS
CTAACATACCTGCATACTGA+TGG 0.582636 8.4:+78830816 None:intergenic
TTAGAGAAGCATCTGAGACA+TGG 0.588744 8.4:-78831076 MS.gene022676:CDS
TTCATCAAGATCCAACAAGA+AGG 0.589955 8.4:-78831118 MS.gene022676:CDS
TGCTTGCAGAGATATAATGC+TGG 0.590515 8.4:-78830400 MS.gene022676:intron
CTTCTACAAGATCATATTGG+CGG 0.596203 8.4:-78830177 MS.gene022676:CDS
GTATCCCTCCAATTAGCAGC+CGG 0.605779 8.4:+78830885 None:intergenic
AAATTACTATTATAAACCAA+AGG 0.606180 8.4:+78830924 None:intergenic
GAGTGTTGAGCACAGAGTGG+TGG 0.608516 8.4:-78829664 MS.gene022676:CDS
CAGGACACGAAGGATAGTAA+TGG 0.610611 8.4:+78830256 None:intergenic
AAATGATATGAGATGCAATG+AGG 0.612549 8.4:-78830295 MS.gene022676:CDS
AGTTCTTCATGAAAATCGGT+GGG 0.617108 8.4:-78830148 MS.gene022676:CDS
AGTCCTTGTCGAATTCGTGA+TGG 0.623298 8.4:+78831195 None:intergenic
GAGTTATTATCAGAAGCACT+TGG 0.624454 8.4:-78830336 MS.gene022676:CDS
GCAAAGGAGAAGTTCCATCA+AGG 0.628190 8.4:+78829475 None:intergenic
AATATGATCTTGTAGAAGCA+CGG 0.628871 8.4:+78830182 None:intergenic
AATTCGTGATGGAACATGCG+AGG 0.635817 8.4:+78831206 None:intergenic
ATTCGTGATGGAACATGCGA+GGG 0.637054 8.4:+78831207 None:intergenic
ATGTTAATGACTAGAGCACC+AGG 0.639891 8.4:+78830108 None:intergenic
GGTGCTCTAGTCATTAACAT+TGG 0.653493 8.4:-78830105 MS.gene022676:CDS
TTCACCGGCTGCTAATTGGA+GGG 0.653841 8.4:-78830889 MS.gene022676:CDS
AGAGAAGCATCTGAGACATG+GGG 0.656233 8.4:-78831074 MS.gene022676:CDS
GGATGAGATGAAGAATGGAG+TGG 0.675495 8.4:-78831009 MS.gene022676:CDS
ATATCAACAAGATCAACAGA+AGG 0.684102 8.4:+78831140 None:intergenic
AGAGTGGTGGCAAACCATGT+CGG 0.690367 8.4:-78829651 MS.gene022676:CDS
CAAGAGTGTTGAGCACAGAG+TGG 0.704603 8.4:-78829667 MS.gene022676:CDS
GTTCCATCACGAATTCGACA+AGG 0.712452 8.4:-78831198 MS.gene022676:CDS
AAGTCAGGTTCAGGACACGA+AGG 0.726655 8.4:+78830246 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTCAATTTTGAAATA+TGG + chr8.4:78831337-78831356 None:intergenic 10.0%
!!! ATTAAATTTTTTTAAATGAC+AGG + chr8.4:78830770-78830789 None:intergenic 10.0%
!!! TATAATTCTTTGAAATATTA+AGG + chr8.4:78830082-78830101 None:intergenic 10.0%
!! AAATTACTATTATAAACCAA+AGG + chr8.4:78829866-78829885 None:intergenic 15.0%
!! ATTTAATATCTATAACCTAA+CGG - chr8.4:78830783-78830802 MS.gene022676:intron 15.0%
!!! TAAGTTATAATCATTTTCAT+CGG - chr8.4:78830831-78830850 MS.gene022676:CDS 15.0%
!! ACATTGTAAAATTTGACATT+CGG - chr8.4:78831037-78831056 MS.gene022676:CDS 20.0%
!! CTCATATCATTTAAATAGTT+TGG + chr8.4:78830484-78830503 None:intergenic 20.0%
!! TGATATAATATGATTGAATG+TGG + chr8.4:78830307-78830326 None:intergenic 20.0%
!!! AAGTTATAATCATTTTCATC+GGG - chr8.4:78830832-78830851 MS.gene022676:CDS 20.0%
!!! TATAAAGTATTGTTTGTGAT+TGG - chr8.4:78830945-78830964 MS.gene022676:CDS 20.0%
! AAAATAAGATATCATGACTG+TGG - chr8.4:78830050-78830069 MS.gene022676:intron 25.0%
! AAACATTGAAAACTTTGATG+CGG - chr8.4:78830139-78830158 MS.gene022676:CDS 25.0%
! AAAGTCATTATCAGTATGTT+TGG + chr8.4:78830581-78830600 None:intergenic 25.0%
! ATAGTTGTGATTAAAGCTTT+AGG - chr8.4:78830350-78830369 MS.gene022676:CDS 25.0%
! GATACTATCTTGAATTTATC+CGG - chr8.4:78830206-78830225 MS.gene022676:CDS 25.0%
! TAATCTTGTATATTCATAGC+CGG + chr8.4:78830228-78830247 None:intergenic 25.0%
! TCTGATACTAATTCCTTTAT+AGG + chr8.4:78831226-78831245 None:intergenic 25.0%
! TTTAAATGACAGGATAAGAA+AGG + chr8.4:78830760-78830779 None:intergenic 25.0%
!! TTTTGATCTTTATAGTTCAC+CGG - chr8.4:78829883-78829902 MS.gene022676:intron 25.0%
!!! TCAATTTTGAAATATGGCAA+AGG + chr8.4:78831331-78831350 None:intergenic 25.0%
!!! TTCTTTCAAGTTGTTAATCA+TGG - chr8.4:78829737-78829756 MS.gene022676:intron 25.0%
AAATGATATGAGATGCAATG+AGG - chr8.4:78830492-78830511 MS.gene022676:intron 30.0%
AAGATAATCCTCCAAAGTAT+AGG - chr8.4:78831245-78831264 MS.gene022676:CDS 30.0%
AATATGATCTTGTAGAAGCA+CGG + chr8.4:78830608-78830627 None:intergenic 30.0%
AATGATATGAGATGCAATGA+GGG - chr8.4:78830493-78830512 MS.gene022676:intron 30.0%
ACAAGACATGTTATGAAACT+TGG - chr8.4:78830415-78830434 MS.gene022676:intron 30.0%
AGATAATCCTCCAAAGTATA+GGG - chr8.4:78831246-78831265 MS.gene022676:CDS 30.0%
ATATCAACAAGATCAACAGA+AGG + chr8.4:78829650-78829669 None:intergenic 30.0%
GCATTTGATGAAACAAAAGA+TGG - chr8.4:78829521-78829540 MS.gene022676:CDS 30.0%
TATGATTGAATGTGGTTCAT+AGG + chr8.4:78830299-78830318 None:intergenic 30.0%
TTCATAGGTTACTGATAAGT+GGG + chr8.4:78830284-78830303 None:intergenic 30.0%
TTTCATCGTTGGATTGTTAA+AGG - chr8.4:78830884-78830903 MS.gene022676:CDS 30.0%
! AAAGCTTTATGGACCTATAA+AGG - chr8.4:78831210-78831229 MS.gene022676:CDS 30.0%
! ACAACTATTTTCCTTCTTGT+TGG + chr8.4:78829683-78829702 None:intergenic 30.0%
! GAAACAAAAGATGGTGTTAA+AGG - chr8.4:78829530-78829549 MS.gene022676:CDS 30.0%
! GGATACCTTTTACTGTTTTA+TGG - chr8.4:78829919-78829938 MS.gene022676:intron 30.0%
! TAAAACTTGTTTATGCCGTT+AGG + chr8.4:78830801-78830820 None:intergenic 30.0%
AACAGAAGGAACAACAAGTT+TGG + chr8.4:78829636-78829655 None:intergenic 35.0%
AAGATTTACCATCAGTATGC+AGG - chr8.4:78829963-78829982 MS.gene022676:intron 35.0%
AGAATTATACACACGTGATC+CGG - chr8.4:78829835-78829854 MS.gene022676:intron 35.0%
AGTTCTTCATGAAAATCGGT+GGG - chr8.4:78830639-78830658 MS.gene022676:intron 35.0%
ATTCTTTGAGCAAGATTCTG+AGG - chr8.4:78829805-78829824 MS.gene022676:intron 35.0%
CATACTGATGGTAAATCTTC+CGG + chr8.4:78829962-78829981 None:intergenic 35.0%
CTTCTACAAGATCATATTGG+CGG - chr8.4:78830610-78830629 MS.gene022676:intron 35.0%
GGATTATGTTTCTTTCTCCA+TGG - chr8.4:78831282-78831301 MS.gene022676:CDS 35.0%
GTGCTTCTACAAGATCATAT+TGG - chr8.4:78830607-78830626 MS.gene022676:intron 35.0%
GTTCATAGGTTACTGATAAG+TGG + chr8.4:78830285-78830304 None:intergenic 35.0%
TCCGAGTTCTTCATGAAAAT+CGG - chr8.4:78830635-78830654 MS.gene022676:intron 35.0%
TGCATGAGCATAGTGATTAT+TGG - chr8.4:78830025-78830044 MS.gene022676:intron 35.0%
TTATAAACCAAAGGCTTCAC+CGG + chr8.4:78829857-78829876 None:intergenic 35.0%
TTCATCAAGATCCAACAAGA+AGG - chr8.4:78829669-78829688 MS.gene022676:CDS 35.0%
! GACAGAGTAATTTTCATCGT+TGG - chr8.4:78830873-78830892 MS.gene022676:CDS 35.0%
! TAACATTGGTGATCTTCTAC+AGG - chr8.4:78830696-78830715 MS.gene022676:intron 35.0%
! TGGTATAGAAGTGAGTGTTT+TGG - chr8.4:78829757-78829776 MS.gene022676:intron 35.0%
! TGTTTTCACGACTGTAGTTA+AGG + chr8.4:78830124-78830143 None:intergenic 35.0%
!! ACCGATTTTCATGAAGAACT+CGG + chr8.4:78830639-78830658 None:intergenic 35.0%
!! ACTGTTGTTTCCCTATACTT+TGG + chr8.4:78831259-78831278 None:intergenic 35.0%
!! GAGTTATTATCAGAAGCACT+TGG - chr8.4:78830451-78830470 MS.gene022676:intron 35.0%
!! GTTTTGGATGAGATGAAGAA+TGG - chr8.4:78829773-78829792 MS.gene022676:intron 35.0%
AATGTGACAACACAAGACTG+TGG + chr8.4:78831022-78831041 None:intergenic 40.0%
ATCCTAACCAACCACAATCT+TGG + chr8.4:78830168-78830187 None:intergenic 40.0%
CAGCCATCAACAAAGCTTTA+TGG - chr8.4:78831199-78831218 MS.gene022676:CDS 40.0%
CATTGAAAACTTTGATGCGG+TGG - chr8.4:78830142-78830161 MS.gene022676:CDS 40.0%
CGGAGCCATAAAACAGTAAA+AGG + chr8.4:78829927-78829946 None:intergenic 40.0%
CTAACATACCTGCATACTGA+TGG + chr8.4:78829974-78829993 None:intergenic 40.0%
GAGTTCTTCATGAAAATCGG+TGG - chr8.4:78830638-78830657 MS.gene022676:intron 40.0%
GATGGTAAATCTTCCGGATT+GGG + chr8.4:78829956-78829975 None:intergenic 40.0%
GGTGCTCTAGTCATTAACAT+TGG - chr8.4:78830682-78830701 MS.gene022676:intron 40.0%
TGATGGTAAATCTTCCGGAT+TGG + chr8.4:78829957-78829976 None:intergenic 40.0%
TGCTTGCAGAGATATAATGC+TGG - chr8.4:78830387-78830406 MS.gene022676:CDS 40.0%
TTTCACGACTGTAGTTAAGG+CGG + chr8.4:78830121-78830140 None:intergenic 40.0%
! ATGTTAATGACTAGAGCACC+AGG + chr8.4:78830682-78830701 None:intergenic 40.0%
! GATTTTCATGAAGAACTCGG+AGG + chr8.4:78830636-78830655 None:intergenic 40.0%
! GTTGTTTCCCTATACTTTGG+AGG + chr8.4:78831256-78831275 None:intergenic 40.0%
!! GGTCCATAAAGCTTTGTTGA+TGG + chr8.4:78831205-78831224 None:intergenic 40.0%
!! TAGAGAAGCATCTGAGACAT+GGG - chr8.4:78829712-78829731 MS.gene022676:intron 40.0%
!! TTAGAGAAGCATCTGAGACA+TGG - chr8.4:78829711-78829730 MS.gene022676:intron 40.0%
AAGCTTGCAACCGATACTCT+TGG + chr8.4:78831163-78831182 None:intergenic 45.0%
AGTCCTTGTCGAATTCGTGA+TGG + chr8.4:78829595-78829614 None:intergenic 45.0%
CAGGACACGAAGGATAGTAA+TGG + chr8.4:78830534-78830553 None:intergenic 45.0%
CGAGCGCAGGACATAATTTA+GGG + chr8.4:78830252-78830271 None:intergenic 45.0%
GCAAAGGAGAAGTTCCATCA+AGG + chr8.4:78831315-78831334 None:intergenic 45.0%
GGATGAGATGAAGAATGGAG+TGG - chr8.4:78829778-78829797 MS.gene022676:intron 45.0%
GTATAGGGAAACAACAGTGC+AGG - chr8.4:78831261-78831280 MS.gene022676:CDS 45.0%
GTTCCATCACGAATTCGACA+AGG - chr8.4:78829589-78829608 MS.gene022676:CDS 45.0%
GTTTCTTTCTCCATGGCAAG+AGG - chr8.4:78831289-78831308 MS.gene022676:CDS 45.0%
TCGAGCGCAGGACATAATTT+AGG + chr8.4:78830253-78830272 None:intergenic 45.0%
! AATTCGTGATGGAACATGCG+AGG + chr8.4:78829584-78829603 None:intergenic 45.0%
! ATAGTTCACCGGCTGCTAAT+TGG - chr8.4:78829894-78829913 MS.gene022676:intron 45.0%
! ATTCGTGATGGAACATGCGA+GGG + chr8.4:78829583-78829602 None:intergenic 45.0%
! CCTGAACCTGACTTGACTTT+GGG - chr8.4:78830550-78830569 MS.gene022676:intron 45.0%
! TCCTGAACCTGACTTGACTT+TGG - chr8.4:78830549-78830568 MS.gene022676:intron 45.0%
!! AGAGAAGCATCTGAGACATG+GGG - chr8.4:78829713-78829732 MS.gene022676:intron 45.0%
!! AGTTTGGTGCTGTTGCTTGA+AGG + chr8.4:78829620-78829639 None:intergenic 45.0%
AAGTCAGGTTCAGGACACGA+AGG + chr8.4:78830544-78830563 None:intergenic 50.0%
AGAGTGGTGGCAAACCATGT+CGG - chr8.4:78831136-78831155 MS.gene022676:CDS 50.0%
CCCAAAGTCAAGTCAGGTTC+AGG + chr8.4:78830553-78830572 None:intergenic 50.0%
GTATCCCTCCAATTAGCAGC+CGG + chr8.4:78829905-78829924 None:intergenic 50.0%
GTTGATGTATCGCCTGTTCC+TGG - chr8.4:78830661-78830680 MS.gene022676:intron 50.0%
GTTGCTCCCAAAGTCAAGTC+AGG + chr8.4:78830559-78830578 None:intergenic 50.0%
! ATGACTAGAGCACCAGGAAC+AGG + chr8.4:78830676-78830695 None:intergenic 50.0%
! CCATGTCGGTCCAAGAGTAT+CGG - chr8.4:78831150-78831169 MS.gene022676:CDS 50.0%
! GGCCAAGATTGTGGTTGGTT+AGG - chr8.4:78830163-78830182 MS.gene022676:CDS 50.0%
! TCTTCCGGATTGGGAGACTT+CGG + chr8.4:78829947-78829966 None:intergenic 50.0%
! TTCACCGGCTGCTAATTGGA+GGG - chr8.4:78829898-78829917 MS.gene022676:intron 50.0%
!! CAAGAGTGTTGAGCACAGAG+TGG - chr8.4:78831120-78831139 MS.gene022676:CDS 50.0%
ACGTGATCCGGTGAAGCCTT+TGG - chr8.4:78829847-78829866 MS.gene022676:intron 55.0%
CCGATACTCTTGGACCGACA+TGG + chr8.4:78831153-78831172 None:intergenic 55.0%
TCCATCAAGGCCTCTTGCCA+TGG + chr8.4:78831302-78831321 None:intergenic 55.0%
TCCATGGCAAGAGGCCTTGA+TGG - chr8.4:78831298-78831317 MS.gene022676:CDS 55.0%
TGATGCGGTGGCCAAGATTG+TGG - chr8.4:78830154-78830173 MS.gene022676:CDS 55.0%
! GTTCACCGGCTGCTAATTGG+AGG - chr8.4:78829897-78829916 MS.gene022676:intron 55.0%
!! GAGTGTTGAGCACAGAGTGG+TGG - chr8.4:78831123-78831142 MS.gene022676:CDS 55.0%
GCGGTGGCCAAGATTGTGGT+TGG - chr8.4:78830158-78830177 MS.gene022676:CDS 60.0%
GGCTCCGAAGTCTCCCAATC+CGG - chr8.4:78829940-78829959 MS.gene022676:intron 60.0%
TGGGCGAGTCACTCGAGCGC+AGG + chr8.4:78830265-78830284 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 78829449 78831360 78829449 ID=MS.gene022676
chr8.4 mRNA 78829449 78831360 78829449 ID=MS.gene022676.t1;Parent=MS.gene022676
chr8.4 exon 78830825 78831360 78830825 ID=MS.gene022676.t1.exon1;Parent=MS.gene022676.t1
chr8.4 CDS 78830825 78831360 78830825 ID=cds.MS.gene022676.t1;Parent=MS.gene022676.t1
chr8.4 exon 78830092 78830413 78830092 ID=MS.gene022676.t1.exon2;Parent=MS.gene022676.t1
chr8.4 CDS 78830092 78830413 78830092 ID=cds.MS.gene022676.t1;Parent=MS.gene022676.t1
chr8.4 exon 78829449 78829709 78829449 ID=MS.gene022676.t1.exon3;Parent=MS.gene022676.t1
chr8.4 CDS 78829449 78829709 78829449 ID=cds.MS.gene022676.t1;Parent=MS.gene022676.t1
Gene Sequence

>MS.gene022676

ATGGAAATCTCTAAAAACAATGAAATTTCATTGACATCAAAACATGACTATGATAGAGCAAGTGAGCTCAAAGCATTTGATGAAACAAAAGATGGTGTTAAAGGACTTGTTGATGCTTCTGTCACAAGCATCCCTCGCATGTTCCATCACGAATTCGACAAGGACTCACCTTCAAGCAACAGCACCAAACTTGTTGTTCCTTCTGTTGATCTTGTTGATATTCATCAAGATCCAACAAGAAGGAAAATAGTTGTTGAGAAAATTAGAGAAGCATCTGAGACATGGGGATTCTTTCAAGTTGTTAATCATGGTATAGAAGTGAGTGTTTTGGATGAGATGAAGAATGGAGTGGTTAGATTCTTTGAGCAAGATTCTGAGGTGAAAAGAGAATTATACACACGTGATCCGGTGAAGCCTTTGGTTTATAATAGTAATTTTGATCTTTATAGTTCACCGGCTGCTAATTGGAGGGATACCTTTTACTGTTTTATGGCTCCGAAGTCTCCCAATCCGGAAGATTTACCATCAGTATGCAGGTATGTTAGATGTAATATATAATTTTATTAGATTAACTCTTGCATGAGCATAGTGATTATTGGAAAAAATAAGATATCATGACTGTGGCGCAATCCTTAATATTTCAAAGAATTATAGTCAAATGAGATTATACCGCCTTAACTACAGTCGTGAAAACATTGAAAACTTTGATGCGGTGGCCAAGATTGTGGTTGGTTAGGATTAGTGAAGAAATTATTTTGATACTATCTTGAATTTATCCGGCTATGAATATACAAGATTATCCCTAAATTATGTCCTGCGCTCGAGTGACTCGCCCACTTATCAGTAACCTATGAACCACATTCAATCATATTATATCATATCTTTGTAGTAGATTTTGATAATAGTTGTGATTAAAGCTTTAGGATATTATGTGCGTATGCTTGCAGAGATATAATGCTGGAATACACAAGACATGTTATGAAACTTGGAAATGTATTGTTTGAGTTATTATCAGAAGCACTTGGACTTGATCCAAACTATTTAAATGATATGAGATGCAATGAGGGAATTGCACTTGTTTGCCATTACTATCCTTCGTGTCCTGAACCTGACTTGACTTTGGGAGCAACCAAACATACTGATAATGACTTTATCACCGTGCTTCTACAAGATCATATTGGCGGCCTCCGAGTTCTTCATGAAAATCGGTGGGTTGATGTATCGCCTGTTCCTGGTGCTCTAGTCATTAACATTGGTGATCTTCTACAGGTAAGTTTTGATCTTTTGATTATGATCTTAATATTCATGCCTTTCTTATCCTGTCATTTAAAAAAATTTAATATCTATAACCTAACGGCATAAACAAGTTTTATGCACGCTTTTAAGTTATAATCATTTTCATCGGGATTTAATTGATATACACTGACAGAGTAATTTTCATCGTTGGATTGTTAAAGGAACTTGACTCTAATTCTATTTATTTACTTTAAAAGTCATATAAAGTATTGTTTGTGATTGGTTGAAAGTGTAAAAAGTGTTACACTGACTGTGCATAAAAATTATTCTCATTCCACAGTCTTGTGTTGTCACATTGTAAAATTTGACATTCGGATTTTCTCTATTAACTAATCAACAATTTTCATTGAAACAGCTTATTACAAATGACAAATTCAAGAGTGTTGAGCACAGAGTGGTGGCAAACCATGTCGGTCCAAGAGTATCGGTTGCAAGCTTTTATAGCACAAGTTTTCAGCCATCAACAAAGCTTTATGGACCTATAAAGGAATTAGTATCAGAAGATAATCCTCCAAAGTATAGGGAAACAACAGTGCAGGATTATGTTTCTTTCTCCATGGCAAGAGGCCTTGATGGAACTTCTCCTTTGCCATATTTCAAAATTGAAAATTTCTGA
Protein sequence

>MS.gene022676.t1

MEISKNNEISLTSKHDYDRASELKAFDETKDGVKGLVDASVTSIPRMFHHEFDKDSPSSNSTKLVVPSVDLVDIHQDPTRRKIVVEKIREASETWGFFQVVNHGIEVSVLDEMKNGVVRFFEQDSEVKRELYTRDPVKPLVYNSNFDLYSSPAANWRDTFYCFMAPKSPNPEDLPSVCRDIMLEYTRHVMKLGNVLFELLSEALGLDPNYLNDMRCNEGIALVCHYYPSCPEPDLTLGATKHTDNDFITVLLQDHIGGLRVLHENRWVDVSPVPGALVINIGDLLQLITNDKFKSVEHRVVANHVGPRVSVASFYSTSFQPSTKLYGPIKELVSEDNPPKYRETTVQDYVSFSMARGLDGTSPLPYFKIENF