AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39368

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39368.t1 MTR_8g009080 92.513 374 26 1 1 372 27 400 0.0 711
MS.gene39368.t1 MTR_8g009080 91.319 288 23 1 1 286 27 314 0.0 545
MS.gene39368.t1 MTR_8g009080 91.228 285 23 1 1 283 27 311 0.0 538
MS.gene39368.t1 MTR_2g069210 65.819 354 119 1 18 369 14 367 2.12e-179 503
MS.gene39368.t1 MTR_8g009160 64.167 360 126 3 12 369 6 364 7.48e-179 501
MS.gene39368.t1 MTR_2g069190 62.803 371 136 1 1 369 1 371 6.11e-176 494
MS.gene39368.t1 MTR_8g028435 64.286 350 123 2 21 369 16 364 1.34e-174 490
MS.gene39368.t1 MTR_8g008930 63.712 361 127 4 12 369 6 365 2.39e-173 487
MS.gene39368.t1 MTR_8g009090 63.611 360 128 3 12 369 6 364 3.13e-173 487
MS.gene39368.t1 MTR_2g069090 61.022 372 142 2 1 369 1 372 5.59e-171 481
MS.gene39368.t1 MTR_8g009110 62.963 351 127 3 21 369 16 365 5.79e-171 481
MS.gene39368.t1 MTR_8g009170 61.326 362 135 5 12 369 6 366 8.41e-167 471
MS.gene39368.t1 MTR_2g069300 59.944 357 140 2 16 369 2 358 6.02e-166 468
MS.gene39368.t1 MTR_1g043770 61.932 352 133 1 18 369 5 355 7.47e-165 465
MS.gene39368.t1 MTR_4g117880 59.392 362 142 5 12 369 6 366 4.42e-159 451
MS.gene39368.t1 MTR_1g043775 60.674 356 137 3 16 369 3 357 3.35e-157 446
MS.gene39368.t1 MTR_1g043810 59.270 356 142 3 16 369 3 357 2.45e-153 436
MS.gene39368.t1 MTR_1g043760 58.757 354 144 2 16 368 3 355 5.02e-150 427
MS.gene39368.t1 MTR_8g041620 54.620 368 162 3 8 370 8 375 6.49e-150 428
MS.gene39368.t1 MTR_2g069010 55.525 362 153 3 17 371 17 377 2.69e-148 424
MS.gene39368.t1 MTR_8g009150 56.980 351 128 4 21 369 16 345 8.89e-148 421
MS.gene39368.t1 MTR_1g093120 54.011 374 163 3 1 369 1 370 2.34e-147 421
MS.gene39368.t1 MTR_8g041600 53.533 368 166 3 8 370 8 375 7.03e-147 421
MS.gene39368.t1 MTR_8g009120 57.265 351 135 5 21 369 16 353 3.97e-144 412
MS.gene39368.t1 MTR_7g056347 52.279 373 174 2 1 369 1 373 6.10e-144 413
MS.gene39368.t1 MTR_8g063070 52.815 373 172 2 1 369 1 373 3.28e-142 408
MS.gene39368.t1 MTR_2g069060 52.304 369 156 3 1 369 1 349 1.77e-140 403
MS.gene39368.t1 MTR_1g093140 51.697 383 166 5 1 369 1 378 4.44e-140 403
MS.gene39368.t1 MTR_0032s0040 51.697 383 165 5 1 371 1 375 1.81e-138 399
MS.gene39368.t1 MTR_1g093110 52.186 366 167 3 12 369 9 374 4.23e-138 398
MS.gene39368.t1 MTR_2g068950 53.333 360 160 3 17 369 11 369 7.48e-138 397
MS.gene39368.t1 MTR_2g069020 54.046 346 155 2 17 358 15 360 3.53e-136 393
MS.gene39368.t1 MTR_2g068960 52.500 360 163 3 17 369 11 369 6.02e-136 392
MS.gene39368.t1 MTR_2g069020 54.046 346 155 2 17 358 15 360 1.72e-135 392
MS.gene39368.t1 MTR_8g006930 52.000 375 172 3 1 369 1 373 2.07e-135 391
MS.gene39368.t1 MTR_4g119410 52.011 373 175 2 1 369 1 373 8.46e-135 390
MS.gene39368.t1 MTR_4g024660 50.134 373 182 2 1 369 1 373 1.82e-134 389
MS.gene39368.t1 MTR_8g062600 50.938 373 179 2 1 369 1 373 2.60e-134 388
MS.gene39368.t1 MTR_7g078010 50.938 373 179 2 1 369 1 373 6.42e-132 382
MS.gene39368.t1 MTR_7g056393 51.206 373 178 2 1 369 1 373 2.15e-131 381
MS.gene39368.t1 MTR_7g029655 49.728 368 173 5 13 371 8 372 1.62e-130 379
MS.gene39368.t1 MTR_8g469400 49.866 373 170 4 1 369 1 360 9.92e-128 371
MS.gene39368.t1 MTR_1g070185 50.281 356 170 3 16 369 17 367 1.52e-125 366
MS.gene39368.t1 MTR_1g043770 62.454 269 100 1 18 286 5 272 6.19e-123 357
MS.gene39368.t1 MTR_8g009170 59.353 278 109 4 12 286 6 282 2.57e-122 355
MS.gene39368.t1 MTR_1g043775 57.190 306 127 4 16 318 3 307 1.60e-119 348
MS.gene39368.t1 MTR_1g043810 61.172 273 103 3 16 286 3 274 1.31e-118 347
MS.gene39368.t1 MTR_8g041600 53.521 284 128 2 8 287 8 291 1.66e-113 333
MS.gene39368.t1 MTR_8g009180 61.290 248 80 4 138 369 47 294 3.12e-108 319
MS.gene39368.t1 MTR_7g078010 52.431 288 136 1 1 287 1 288 4.96e-104 309
MS.gene39368.t1 MTR_7g056353 46.648 358 161 4 14 368 16 346 1.34e-103 315
MS.gene39368.t1 MTR_7g105070 41.899 358 204 3 17 371 8 364 4.43e-103 308
MS.gene39368.t1 MTR_2g069060 54.656 247 109 1 44 287 2 248 2.80e-99 295
MS.gene39368.t1 MTR_1g032140 42.857 364 199 4 9 368 6 364 3.90e-91 278
MS.gene39368.t1 MTR_1g032220 41.854 356 198 5 17 368 21 371 5.27e-91 278
MS.gene39368.t1 MTR_1g032250 41.379 348 195 4 17 360 21 363 2.21e-87 269
MS.gene39368.t1 MTR_1g043840 52.660 188 84 2 180 363 50 236 1.75e-65 211
MS.gene39368.t1 MTR_1g043840 61.842 76 28 1 74 149 254 328 4.80e-24 101
MS.gene39368.t1 MTR_7g068650 35.593 354 209 8 24 362 6 355 1.15e-61 202
MS.gene39368.t1 MTR_1g044105 57.059 170 65 3 16 178 3 171 3.91e-59 189
MS.gene39368.t1 MTR_4g015790 33.520 358 202 8 33 362 14 363 5.32e-58 193
MS.gene39368.t1 MTR_5g065010 33.981 309 196 6 65 369 38 342 6.80e-58 192
MS.gene39368.t1 MTR_5g082750 35.191 341 205 7 33 362 14 349 1.77e-57 191
MS.gene39368.t1 MTR_3g092890 35.806 310 181 6 66 368 38 336 3.55e-56 187
MS.gene39368.t1 MTR_8g024120 33.442 308 195 4 66 369 42 343 1.52e-55 186
MS.gene39368.t1 MTR_2g068840 33.333 351 213 7 31 369 20 361 1.57e-54 184
MS.gene39368.t1 MTR_5g055690 29.565 345 229 6 33 370 13 350 8.02e-53 179
MS.gene39368.t1 MTR_5g048850 28.488 344 235 6 33 371 13 350 1.46e-52 178
MS.gene39368.t1 MTR_7g056370 48.352 182 93 1 27 207 6 187 2.38e-52 173
MS.gene39368.t1 MTR_1g070120 35.548 301 176 9 57 351 33 321 4.02e-52 177
MS.gene39368.t1 MTR_0009s0050 29.191 346 232 7 32 371 12 350 1.20e-51 176
MS.gene39368.t1 MTR_1g070135 35.959 292 173 8 66 351 38 321 1.28e-51 175
MS.gene39368.t1 MTR_0009s0050 29.191 346 232 7 32 371 12 350 1.42e-51 176
MS.gene39368.t1 MTR_6g015950 34.591 318 186 8 42 349 14 319 3.16e-51 174
MS.gene39368.t1 MTR_3g063180 32.647 340 211 10 33 360 10 343 7.21e-51 174
MS.gene39368.t1 MTR_5g055820 29.480 346 228 8 33 370 13 350 4.56e-50 172
MS.gene39368.t1 MTR_5g048570 28.940 349 227 10 32 371 12 348 5.12e-50 171
MS.gene39368.t1 MTR_0328s0030 29.738 343 228 7 33 369 11 346 9.06e-50 171
MS.gene39368.t1 MTR_1g062110 32.344 337 206 8 32 352 26 356 9.09e-50 171
MS.gene39368.t1 MTR_8g064200 29.586 338 218 8 33 360 18 345 9.51e-50 171
MS.gene39368.t1 MTR_8g064200 29.586 338 218 8 33 360 23 350 1.27e-49 171
MS.gene39368.t1 MTR_1g070085 34.641 306 177 9 65 359 36 329 1.93e-49 170
MS.gene39368.t1 MTR_1g070085 34.641 306 177 9 65 359 36 329 1.93e-49 170
MS.gene39368.t1 MTR_2g072890 28.739 341 230 9 38 371 23 357 3.36e-49 169
MS.gene39368.t1 MTR_3g045230 30.946 349 221 7 31 369 16 354 4.13e-49 169
MS.gene39368.t1 MTR_5g055680 31.250 320 206 7 58 371 39 350 4.74e-49 169
MS.gene39368.t1 MTR_7g102720 33.447 293 181 4 84 369 50 335 5.84e-49 168
MS.gene39368.t1 MTR_5g048740 30.058 346 228 8 33 371 11 349 1.70e-48 167
MS.gene39368.t1 MTR_2g072910 28.161 348 235 9 32 371 16 356 1.72e-48 167
MS.gene39368.t1 MTR_3g070860 31.529 314 201 7 58 362 42 350 1.98e-48 167
MS.gene39368.t1 MTR_1g034140 34.516 310 176 7 61 351 19 320 2.59e-48 167
MS.gene39368.t1 MTR_5g048470 29.586 338 221 8 32 360 17 346 4.89e-48 166
MS.gene39368.t1 MTR_5g055900 29.971 347 226 9 32 370 12 349 5.04e-48 166
MS.gene39368.t1 MTR_4g093840 32.803 314 192 10 66 369 62 366 1.13e-47 166
MS.gene39368.t1 MTR_0009s0480 29.480 346 229 8 33 371 12 349 1.27e-47 165
MS.gene39368.t1 MTR_4g087110 33.887 301 168 9 66 342 26 319 4.82e-47 164
MS.gene39368.t1 MTR_5g048550 28.161 348 231 7 33 371 13 350 1.03e-46 163
MS.gene39368.t1 MTR_5g032870 34.737 285 174 5 66 342 38 318 2.22e-46 162
MS.gene39368.t1 MTR_2g069070 43.017 179 85 1 1 179 1 162 5.65e-46 156
MS.gene39368.t1 MTR_2g437380 32.877 292 186 4 85 370 70 357 7.71e-46 160
MS.gene39368.t1 MTR_1g034120 33.444 302 170 7 66 342 26 321 8.46e-46 160
MS.gene39368.t1 MTR_4g099380 46.821 173 83 3 10 179 116 282 8.49e-46 158
MS.gene39368.t1 MTR_8g075890 34.686 271 167 5 66 330 39 305 1.53e-45 160
MS.gene39368.t1 MTR_3g043900 30.372 349 222 8 31 369 16 353 2.69e-45 159
MS.gene39368.t1 MTR_1g034060 33.113 302 171 7 66 342 26 321 3.84e-45 159
MS.gene39368.t1 MTR_7g081710 31.481 324 209 7 36 352 17 334 4.63e-45 158
MS.gene39368.t1 MTR_7g016090 32.710 321 183 8 61 370 34 332 5.49e-45 158
MS.gene39368.t1 MTR_7g016090 32.710 321 183 8 61 370 36 334 5.57e-45 158
MS.gene39368.t1 MTR_7g102820 31.494 308 191 5 64 356 65 367 5.75e-45 159
MS.gene39368.t1 MTR_5g055800 27.826 345 235 7 33 371 13 349 5.94e-45 158
MS.gene39368.t1 MTR_3g083370 34.528 307 175 10 67 363 5 295 6.42e-45 157
MS.gene39368.t1 MTR_2g025120 32.680 306 184 8 67 363 5 297 9.63e-45 157
MS.gene39368.t1 MTR_4g087100 32.781 302 170 9 66 342 26 319 1.19e-44 157
MS.gene39368.t1 MTR_1g033810 29.518 332 219 8 28 349 4 330 1.22e-44 157
MS.gene39368.t1 MTR_2g068800 31.673 281 159 5 31 301 20 277 1.23e-44 155
MS.gene39368.t1 MTR_8g008960 93.506 77 5 0 296 372 29 105 1.24e-44 149
MS.gene39368.t1 MTR_3g091350 28.529 340 225 8 33 359 23 357 1.37e-44 157
MS.gene39368.t1 MTR_1g070080 33.106 293 178 7 66 350 38 320 3.95e-44 155
MS.gene39368.t1 MTR_5g085330 33.673 294 173 8 81 363 18 300 4.27e-44 155
MS.gene39368.t1 MTR_7g062580 32.014 278 180 5 87 359 73 346 4.56e-44 156
MS.gene39368.t1 MTR_3g058610 34.884 258 155 4 66 314 39 292 4.59e-44 156
MS.gene39368.t1 MTR_8g075830 34.307 274 164 6 66 330 39 305 6.07e-44 156
MS.gene39368.t1 MTR_5g032880 34.909 275 167 5 84 350 48 318 1.18e-43 160
MS.gene39368.t1 MTR_5g032880 34.035 285 176 5 66 342 376 656 9.11e-41 152
MS.gene39368.t1 MTR_5g059130 31.902 326 193 10 40 350 16 327 3.18e-43 153
MS.gene39368.t1 MTR_7g063730 30.690 290 190 6 87 370 82 366 4.49e-43 154
MS.gene39368.t1 MTR_7g062570 30.928 291 192 4 85 370 71 357 6.13e-43 153
MS.gene39368.t1 MTR_5g022020 33.077 260 165 4 66 318 39 296 1.06e-42 152
MS.gene39368.t1 MTR_4g087090 30.745 322 183 11 61 356 22 329 1.39e-42 152
MS.gene39368.t1 MTR_4g087120 31.126 302 175 8 66 342 26 319 1.48e-42 152
MS.gene39368.t1 MTR_1g048940 31.190 311 200 8 69 371 48 352 3.26e-42 151
MS.gene39368.t1 MTR_3g072820 31.657 338 214 11 28 356 2 331 3.52e-42 150
MS.gene39368.t1 MTR_3g091360 30.368 326 210 9 37 350 15 335 3.55e-42 151
MS.gene39368.t1 MTR_2g102570 33.981 309 168 11 60 351 46 335 8.79e-42 150
MS.gene39368.t1 MTR_4g087140 30.903 288 171 7 76 342 40 320 4.32e-41 148
MS.gene39368.t1 MTR_8g074050 31.288 326 203 8 54 369 40 354 4.96e-41 148
MS.gene39368.t1 MTR_7g062550 31.142 289 190 4 87 370 78 362 7.98e-41 148
MS.gene39368.t1 MTR_2g083000 30.769 299 190 5 59 354 26 310 1.00e-40 146
MS.gene39368.t1 MTR_2g083030 30.822 292 176 6 66 349 37 310 1.72e-40 146
MS.gene39368.t1 MTR_5g059140 32.797 311 186 11 42 339 16 316 2.16e-40 145
MS.gene39368.t1 MTR_7g062600 30.742 283 184 6 87 362 69 346 3.24e-40 145
MS.gene39368.t1 MTR_3g117420 30.058 346 212 8 30 369 33 354 8.42e-40 144
MS.gene39368.t1 MTR_8g074070 30.675 326 205 8 54 369 40 354 1.61e-39 144
MS.gene39368.t1 MTR_1g070135 36.123 227 136 6 66 287 38 260 4.65e-39 141
MS.gene39368.t1 MTR_5g011250 30.263 304 193 8 66 356 47 344 1.32e-38 141
MS.gene39368.t1 MTR_1g070085 33.603 247 149 5 121 359 12 251 1.54e-38 139
MS.gene39368.t1 MTR_7g016080 32.423 293 162 9 61 341 36 304 1.79e-38 140
MS.gene39368.t1 MTR_0009s0050 32.127 221 142 4 156 371 35 252 6.52e-38 137
MS.gene39368.t1 MTR_0009s0050 32.127 221 142 4 156 371 35 252 7.33e-38 137
MS.gene39368.t1 MTR_3g088565 32.509 283 170 9 64 337 1 271 1.19e-37 137
MS.gene39368.t1 MTR_1g070100 34.034 238 144 4 121 351 8 239 1.38e-37 136
MS.gene39368.t1 MTR_3g072810 32.333 300 173 8 64 349 38 321 1.65e-37 138
MS.gene39368.t1 MTR_0056s0160 33.484 221 139 4 156 371 18 235 6.23e-37 134
MS.gene39368.t1 MTR_7g062560 27.431 288 196 4 87 372 80 356 6.67e-37 137
MS.gene39368.t1 MTR_5g055690 30.038 263 173 5 32 287 12 270 1.30e-36 134
MS.gene39368.t1 MTR_2g437380 32.530 249 159 3 128 370 18 263 1.53e-36 134
MS.gene39368.t1 MTR_3g026150 30.519 308 201 8 57 359 52 351 2.03e-36 135
MS.gene39368.t1 MTR_4g074130 31.399 293 174 7 66 349 40 314 2.39e-36 135
MS.gene39368.t1 MTR_6g092620 29.391 279 173 10 64 328 1 269 1.77e-35 132
MS.gene39368.t1 MTR_0009s0050 34.682 173 109 2 200 371 1 170 2.57e-35 127
MS.gene39368.t1 MTR_8g074070 29.874 318 199 8 54 369 40 335 3.63e-35 132
MS.gene39368.t1 MTR_5g005570 31.544 298 178 7 35 318 2 287 4.42e-35 131
MS.gene39368.t1 MTR_7g451860 30.034 293 179 6 66 349 41 316 4.84e-35 131
MS.gene39368.t1 MTR_7g047670 30.034 293 179 6 66 349 41 316 4.84e-35 131
MS.gene39368.t1 MTR_6g464620 29.968 317 198 5 53 353 51 359 5.68e-35 132
MS.gene39368.t1 MTR_3g040410 30.033 303 184 11 65 354 5 292 6.71e-35 130
MS.gene39368.t1 MTR_1g081840 31.707 287 169 8 84 353 72 348 1.24e-34 131
MS.gene39368.t1 MTR_1g062110 31.618 272 167 7 32 287 26 294 4.74e-34 128
MS.gene39368.t1 MTR_1g011580 29.206 315 182 11 65 364 62 350 1.01e-33 128
MS.gene39368.t1 MTR_3g464530 30.153 262 154 8 66 314 34 279 1.55e-33 127
MS.gene39368.t1 MTR_4g116010 30.565 301 190 9 56 349 40 328 1.76e-33 127
MS.gene39368.t1 MTR_0009s0480 29.545 264 175 7 33 290 12 270 1.78e-33 125
MS.gene39368.t1 MTR_4g087130 30.132 302 177 8 66 342 26 318 2.48e-33 127
MS.gene39368.t1 MTR_5g048850 28.352 261 179 5 33 288 13 270 2.68e-33 125
MS.gene39368.t1 MTR_1g102070 29.971 347 213 8 28 353 17 354 5.47e-33 127
MS.gene39368.t1 MTR_7g045650 31.557 244 159 4 87 325 78 318 8.55e-33 125
MS.gene39368.t1 MTR_3g117485 33.692 279 160 10 85 350 69 335 7.33e-32 123
MS.gene39368.t1 MTR_6g088665 29.538 325 194 12 53 351 7 322 7.47e-31 120
MS.gene39368.t1 MTR_8g033380 28.788 330 217 6 36 353 25 348 1.07e-30 120
MS.gene39368.t1 MTR_6g088665 29.878 328 190 13 53 351 7 323 1.30e-30 119
MS.gene39368.t1 MTR_2g025120 31.878 229 138 6 67 287 5 223 6.67e-30 115
MS.gene39368.t1 MTR_3g096500 27.044 318 201 4 63 353 48 361 8.59e-30 118
MS.gene39368.t1 MTR_3g083370 33.188 229 135 7 67 287 5 223 9.62e-30 114
MS.gene39368.t1 MTR_7g077670 31.502 273 170 8 90 352 30 295 3.08e-29 115
MS.gene39368.t1 MTR_2g019370 28.571 336 188 11 41 349 3 313 3.44e-29 115
MS.gene39368.t1 MTR_3g088745 29.373 303 198 6 63 353 33 331 4.26e-29 116
MS.gene39368.t1 MTR_3g117485 33.962 265 150 10 98 349 10 262 1.38e-28 112
MS.gene39368.t1 MTR_1g032240 40.260 154 82 2 164 316 1 145 2.06e-28 109
MS.gene39368.t1 MTR_8g093930 26.374 364 241 9 20 367 2 354 3.52e-28 113
MS.gene39368.t1 MTR_0009s0400 33.784 148 94 2 225 371 2 146 4.60e-28 107
MS.gene39368.t1 MTR_8g030880 31.579 304 176 12 67 352 6 295 6.52e-28 112
MS.gene39368.t1 MTR_8g102600 28.966 290 179 7 85 351 26 311 8.69e-28 111
MS.gene39368.t1 MTR_4g123020 28.344 314 206 9 56 357 5 311 1.24e-27 111
MS.gene39368.t1 MTR_3g026150 29.365 252 169 5 113 359 1 248 1.33e-27 109
MS.gene39368.t1 MTR_5g027230 28.435 313 181 11 62 356 2 289 3.04e-27 109
MS.gene39368.t1 MTR_1g027290 27.586 319 207 10 66 369 29 338 4.31e-27 110
MS.gene39368.t1 MTR_4g132770 46.364 110 55 2 227 335 32 138 1.55e-26 103
MS.gene39368.t1 MTR_2g072910 26.592 267 184 9 32 290 16 278 3.00e-26 106
MS.gene39368.t1 MTR_3g464530 28.936 235 138 8 66 287 34 252 4.30e-26 105
MS.gene39368.t1 MTR_5g025050 27.000 300 190 9 65 355 4 283 1.56e-25 105
MS.gene39368.t1 MTR_2g070870 26.797 306 173 10 68 349 27 305 5.84e-25 103
MS.gene39368.t1 MTR_8g461330 26.623 308 181 12 66 349 27 313 7.11e-25 103
MS.gene39368.t1 MTR_2g033270 27.306 271 175 8 56 314 5 265 2.75e-24 102
MS.gene39368.t1 MTR_3g026150 29.661 236 156 6 57 287 52 282 5.08e-24 100
MS.gene39368.t1 MTR_5g025090 25.697 323 191 10 66 369 5 297 6.58e-24 100
MS.gene39368.t1 MTR_8g102600 32.828 198 120 5 163 351 68 261 3.46e-23 98.2
MS.gene39368.t1 MTR_1g086550 27.434 339 202 13 59 370 12 333 5.12e-23 99.0
MS.gene39368.t1 MTR_8g093980 26.014 296 198 5 59 341 52 339 7.14e-23 99.0
MS.gene39368.t1 MTR_1g070110 29.528 254 126 8 110 347 1 217 1.85e-22 95.1
MS.gene39368.t1 MTR_5g024940 27.778 306 167 11 62 355 2 265 4.34e-22 95.1
MS.gene39368.t1 MTR_4g115990 28.625 269 172 10 94 360 68 318 1.85e-21 94.0
MS.gene39368.t1 MTR_4g100600 28.754 313 190 13 59 351 2 301 2.04e-21 94.0
MS.gene39368.t1 MTR_5g025060 25.517 290 176 9 62 349 2 253 2.67e-20 90.1
MS.gene39368.t1 MTR_4g096840 26.557 305 183 12 66 349 29 313 1.83e-19 88.6
MS.gene39368.t1 MTR_1g027310 24.919 309 186 9 66 369 49 316 1.55e-18 85.9
MS.gene39368.t1 MTR_4g100590 26.000 300 193 10 68 349 6 294 8.93e-18 83.6
MS.gene39368.t1 MTR_4g099390 44.048 84 45 1 288 369 1 84 1.46e-17 77.0
MS.gene39368.t1 MTR_2g069130 39.535 129 66 4 70 195 12 131 5.40e-17 77.4
MS.gene39368.t1 MTR_7g084360 34.731 167 65 3 177 342 7 130 2.63e-15 72.4
MS.gene39368.t1 MTR_3g040440 46.875 64 34 0 237 300 15 78 3.96e-15 75.1
MS.gene39368.t1 MTR_4g100590 28.994 169 104 5 189 349 87 247 5.81e-14 71.6
MS.gene39368.t1 MTR_7g090520 23.529 306 213 9 58 352 2 297 5.57e-13 69.3
MS.gene39368.t1 MTR_4g011720 24.855 173 125 5 185 356 131 299 7.17e-13 68.9
MS.gene39368.t1 MTR_1g032230 30.714 140 72 2 17 153 15 132 1.15e-12 68.2
MS.gene39368.t1 MTR_4g021360 21.908 283 200 7 82 352 25 298 2.12e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39368.t1 AT1G06650 59.722 360 138 3 17 369 10 369 4.90e-160 454
MS.gene39368.t1 AT5G59540 57.660 359 147 3 16 369 8 366 7.40e-159 451
MS.gene39368.t1 AT1G06620 57.534 365 151 2 8 369 2 365 3.28e-157 446
MS.gene39368.t1 AT1G06640 57.500 360 146 3 17 369 10 369 2.63e-153 436
MS.gene39368.t1 AT5G59530 56.704 358 151 4 16 369 7 364 1.48e-149 427
MS.gene39368.t1 AT2G30840 58.217 359 143 4 17 369 5 362 2.57e-148 424
MS.gene39368.t1 AT1G06645 57.222 360 144 5 17 369 23 379 2.93e-148 424
MS.gene39368.t1 AT1G04350 55.153 359 153 4 16 369 5 360 7.49e-147 420
MS.gene39368.t1 AT2G30830 55.618 356 155 3 16 369 4 358 3.63e-146 418
MS.gene39368.t1 AT2G30840 57.103 359 141 5 17 369 5 356 3.27e-142 408
MS.gene39368.t1 AT1G04380 52.125 353 153 2 17 369 9 345 1.13e-138 399
MS.gene39368.t1 AT5G43440 53.221 357 160 4 19 369 10 365 1.03e-137 397
MS.gene39368.t1 AT1G03410 56.509 338 141 3 18 349 5 342 1.24e-136 394
MS.gene39368.t1 AT1G03410 56.509 338 141 3 18 349 42 379 3.77e-136 394
MS.gene39368.t1 AT2G25450 52.101 357 167 4 16 369 4 359 3.88e-135 390
MS.gene39368.t1 AT5G43450 53.090 356 161 3 18 369 9 362 5.06e-134 387
MS.gene39368.t1 AT3G61400 48.343 362 167 6 18 364 10 366 5.59e-125 365
MS.gene39368.t1 AT1G03400 50.416 361 156 5 18 369 5 351 1.68e-123 360
MS.gene39368.t1 AT1G06620 57.447 282 116 2 8 286 2 282 7.49e-119 346
MS.gene39368.t1 AT5G59540 56.679 277 115 3 16 287 8 284 9.96e-119 345
MS.gene39368.t1 AT1G06650 58.123 277 110 2 17 287 10 286 1.50e-117 343
MS.gene39368.t1 AT1G03400 46.787 389 156 6 18 369 5 379 4.79e-117 345
MS.gene39368.t1 AT1G06640 56.522 276 114 2 17 286 10 285 1.79e-114 336
MS.gene39368.t1 AT2G30840 57.455 275 112 2 17 286 5 279 3.81e-114 335
MS.gene39368.t1 AT1G06640 55.957 277 116 2 17 287 10 286 1.67e-113 332
MS.gene39368.t1 AT5G43440 53.285 274 121 4 19 286 10 282 7.61e-106 313
MS.gene39368.t1 AT5G43450 53.929 280 123 3 18 293 9 286 2.74e-105 311
MS.gene39368.t1 AT1G04380 50.923 271 117 2 17 287 9 263 9.86e-101 299
MS.gene39368.t1 AT3G61400 47.887 284 129 5 18 287 10 288 6.17e-95 285
MS.gene39368.t1 AT3G12900 36.127 346 207 9 31 370 20 357 3.54e-66 214
MS.gene39368.t1 AT3G13610 33.333 351 208 8 31 369 25 361 7.47e-62 202
MS.gene39368.t1 AT4G10500 36.246 309 184 6 66 368 44 345 2.10e-59 196
MS.gene39368.t1 AT1G55290 32.682 358 202 9 31 369 24 361 1.04e-57 192
MS.gene39368.t1 AT5G24530 36.424 302 184 5 71 367 40 338 2.19e-57 190
MS.gene39368.t1 AT4G10490 33.766 308 194 5 66 368 42 344 4.48e-55 184
MS.gene39368.t1 AT2G38240 34.706 340 201 9 33 360 12 342 8.49e-55 184
MS.gene39368.t1 AT3G11180 36.585 287 165 6 86 362 112 391 1.12e-52 180
MS.gene39368.t1 AT3G19000 36.000 300 161 8 66 343 32 322 2.40e-52 177
MS.gene39368.t1 AT2G36690 33.432 338 209 8 30 356 18 350 5.64e-52 177
MS.gene39368.t1 AT2G36690 33.432 338 209 8 30 356 18 350 5.64e-52 177
MS.gene39368.t1 AT3G11180 36.396 283 161 7 86 357 112 386 1.03e-51 177
MS.gene39368.t1 AT4G25310 34.932 292 175 8 85 369 70 353 3.66e-51 174
MS.gene39368.t1 AT5G05600 31.412 347 210 9 33 362 27 362 4.14e-51 175
MS.gene39368.t1 AT4G25300 33.562 292 182 7 85 369 70 356 3.64e-50 172
MS.gene39368.t1 AT1G17020 30.994 342 220 10 38 369 23 358 4.77e-49 169
MS.gene39368.t1 AT1G17010 29.738 343 227 8 38 371 23 360 6.20e-49 169
MS.gene39368.t1 AT3G19010 36.149 296 163 7 66 342 28 316 4.99e-48 166
MS.gene39368.t1 AT3G19010 36.149 296 163 7 66 342 28 316 4.99e-48 166
MS.gene39368.t1 AT3G55970 31.471 340 214 9 33 357 14 349 9.16e-48 166
MS.gene39368.t1 AT4G16330 34.539 304 175 10 66 360 67 355 1.25e-45 160
MS.gene39368.t1 AT2G44800 32.441 299 193 5 58 352 44 337 2.05e-45 159
MS.gene39368.t1 AT3G60290 32.450 302 193 6 56 352 42 337 3.66e-45 159
MS.gene39368.t1 AT1G78550 31.034 290 191 4 85 369 71 356 1.20e-44 157
MS.gene39368.t1 AT1G05010 35.117 299 164 10 81 363 17 301 1.21e-44 157
MS.gene39368.t1 AT3G21420 32.113 355 222 10 31 371 15 364 1.23e-44 157
MS.gene39368.t1 AT5G08640 33.106 293 179 7 65 349 42 325 3.44e-44 155
MS.gene39368.t1 AT5G08640 33.106 293 179 7 65 349 42 325 3.44e-44 155
MS.gene39368.t1 AT3G51240 34.559 272 166 6 66 330 38 304 4.94e-44 156
MS.gene39368.t1 AT1G77330 32.558 301 174 9 64 350 1 286 2.80e-43 152
MS.gene39368.t1 AT4G21200 33.935 277 157 7 57 319 28 292 9.63e-43 152
MS.gene39368.t1 AT3G19000 34.127 252 138 7 66 295 32 277 1.67e-40 144
MS.gene39368.t1 AT5G07480 30.195 308 199 7 56 352 34 336 1.95e-40 146
MS.gene39368.t1 AT4G22880 28.818 347 211 10 33 354 7 342 2.90e-40 146
MS.gene39368.t1 AT4G22880 28.818 347 211 10 33 354 7 342 2.90e-40 146
MS.gene39368.t1 AT4G22880 28.818 347 211 10 33 354 7 342 2.90e-40 146
MS.gene39368.t1 AT1G78550 30.216 278 185 4 97 369 5 278 3.03e-40 144
MS.gene39368.t1 AT1G12010 31.046 306 186 9 67 363 8 297 5.22e-40 144
MS.gene39368.t1 AT1G62380 33.220 295 172 10 67 352 8 286 7.60e-40 144
MS.gene39368.t1 AT3G19010 33.446 296 141 8 66 342 28 286 1.09e-39 143
MS.gene39368.t1 AT4G25420 31.429 315 195 6 53 353 48 355 9.84e-39 142
MS.gene39368.t1 AT5G63590 30.537 298 187 8 62 349 10 297 6.39e-38 138
MS.gene39368.t1 AT5G12270 27.966 354 229 10 30 369 18 359 1.15e-36 136
MS.gene39368.t1 AT4G25310 31.271 291 159 9 85 369 70 325 1.28e-36 135
MS.gene39368.t1 AT4G16330 35.714 210 124 4 155 360 47 249 1.35e-35 131
MS.gene39368.t1 AT2G19590 30.576 278 170 10 63 328 8 274 1.76e-35 132
MS.gene39368.t1 AT1G80330 30.822 292 165 10 84 352 59 336 2.41e-35 132
MS.gene39368.t1 AT5G20400 30.619 307 197 8 66 364 45 343 1.10e-34 130
MS.gene39368.t1 AT3G51240 37.368 190 108 5 148 330 35 220 3.07e-34 128
MS.gene39368.t1 AT5G63600 28.438 320 205 8 38 350 8 310 3.12e-34 129
MS.gene39368.t1 AT1G15550 30.159 315 177 11 56 350 47 338 9.87e-34 128
MS.gene39368.t1 AT5G05600 28.676 272 169 8 33 287 27 290 9.97e-34 127
MS.gene39368.t1 AT5G20550 29.967 307 200 8 66 364 45 344 1.21e-33 128
MS.gene39368.t1 AT4G25300 34.197 193 122 3 179 369 73 262 2.47e-33 125
MS.gene39368.t1 AT5G63600 28.349 321 205 9 38 350 8 311 4.78e-33 126
MS.gene39368.t1 AT3G19010 33.607 244 139 6 66 290 28 267 1.24e-32 124
MS.gene39368.t1 AT1G80340 29.967 307 186 9 58 351 42 332 7.62e-32 123
MS.gene39368.t1 AT3G55970 29.630 270 174 8 33 287 14 282 1.59e-31 121
MS.gene39368.t1 AT1G50960 27.152 302 205 7 51 349 25 314 2.03e-31 122
MS.gene39368.t1 AT5G51810 29.167 312 202 5 53 353 50 353 5.66e-31 121
MS.gene39368.t1 AT5G63595 33.333 255 128 9 67 310 26 249 6.28e-31 119
MS.gene39368.t1 AT5G54000 30.566 265 172 6 85 342 65 324 1.26e-30 120
MS.gene39368.t1 AT5G07200 27.628 333 221 7 36 353 29 356 5.33e-30 119
MS.gene39368.t1 AT2G19590 32.099 243 144 9 98 328 26 259 5.54e-30 117
MS.gene39368.t1 AT1G60980 28.302 318 204 6 53 354 44 353 7.72e-30 118
MS.gene39368.t1 AT4G25420 33.061 245 146 5 53 283 48 288 8.34e-30 116
MS.gene39368.t1 AT4G21690 28.826 281 176 8 88 351 61 334 1.09e-29 117
MS.gene39368.t1 AT5G43935 29.568 301 160 13 66 350 19 283 1.29e-28 113
MS.gene39368.t1 AT1G49390 28.179 291 197 6 66 350 45 329 3.01e-28 113
MS.gene39368.t1 AT1G30040 28.214 280 177 8 87 351 44 314 4.52e-28 112
MS.gene39368.t1 AT1G78440 28.289 304 181 11 65 349 17 302 6.23e-28 112
MS.gene39368.t1 AT1G14130 28.617 311 190 10 64 362 7 297 8.08e-28 111
MS.gene39368.t1 AT5G07480 33.862 189 113 6 171 352 44 227 6.27e-26 105
MS.gene39368.t1 AT5G54000 29.719 249 163 6 101 342 1 244 6.74e-26 105
MS.gene39368.t1 AT1G14120 27.879 330 179 13 65 369 7 302 1.78e-25 105
MS.gene39368.t1 AT1G14120 27.879 330 179 13 65 369 7 302 1.78e-25 105
MS.gene39368.t1 AT1G14120 27.879 330 179 13 65 369 7 302 1.78e-25 105
MS.gene39368.t1 AT5G51810 30.120 249 158 4 53 290 50 293 6.84e-25 103
MS.gene39368.t1 AT2G34555 25.857 321 181 10 56 349 17 307 9.65e-25 103
MS.gene39368.t1 AT4G23340 29.856 278 166 8 91 352 30 294 3.35e-24 102
MS.gene39368.t1 AT3G47190 28.000 250 152 7 85 316 42 281 1.38e-23 100
MS.gene39368.t1 AT1G47990 28.053 303 187 11 60 344 4 293 1.42e-23 100
MS.gene39368.t1 AT1G44090 28.387 310 194 9 64 355 61 360 3.50e-23 100
MS.gene39368.t1 AT5G58660 29.502 261 149 9 86 314 45 302 3.82e-23 99.4
MS.gene39368.t1 AT5G63580 30.544 239 151 7 56 287 10 240 1.88e-22 95.1
MS.gene39368.t1 AT5G63580 30.802 237 149 7 56 285 10 238 2.51e-22 95.1
MS.gene39368.t1 AT1G49390 28.125 256 172 6 101 350 1 250 3.59e-22 95.1
MS.gene39368.t1 AT4G23340 32.967 182 111 6 182 355 1 179 1.63e-20 89.0
MS.gene39368.t1 AT3G46490 25.962 312 197 11 66 351 14 317 1.44e-19 89.0
MS.gene39368.t1 AT5G51310 26.552 290 176 9 88 352 22 299 1.52e-19 89.0
MS.gene39368.t1 AT3G46500 27.244 312 196 13 61 351 9 310 6.30e-19 87.0
MS.gene39368.t1 AT3G46490 26.165 279 171 9 66 319 14 282 2.01e-18 85.5
MS.gene39368.t1 AT4G16765 30.453 243 140 12 127 350 4 236 9.81e-18 82.4
MS.gene39368.t1 AT4G16765 30.453 243 140 12 127 350 4 236 9.81e-18 82.4
MS.gene39368.t1 AT4G16765 30.453 243 140 12 127 350 4 236 9.81e-18 82.4
MS.gene39368.t1 AT3G49620 25.681 257 174 5 84 324 60 315 2.22e-17 82.8
MS.gene39368.t1 AT3G50210 27.174 276 141 11 84 319 34 289 2.60e-17 82.4
MS.gene39368.t1 AT3G50210 27.174 276 141 11 84 319 34 289 2.60e-17 82.4
MS.gene39368.t1 AT3G50210 27.174 276 141 11 84 319 34 289 2.60e-17 82.4
MS.gene39368.t1 AT5G58660 27.468 233 135 8 86 287 45 274 3.05e-17 81.6
MS.gene39368.t1 AT1G30040 25.926 216 139 7 87 287 44 253 4.89e-17 80.5
MS.gene39368.t1 AT4G16765 31.197 234 132 12 127 341 4 227 6.48e-17 79.7
MS.gene39368.t1 AT2G06960 33.824 136 73 3 221 356 27 145 8.88e-16 74.3
MS.gene39368.t1 AT3G49630 25.292 257 175 5 84 324 35 290 1.04e-15 77.8
MS.gene39368.t1 AT3G46500 30.542 203 125 8 158 351 41 236 1.06e-15 76.6
MS.gene39368.t1 AT3G46500 30.542 203 125 8 158 351 41 236 1.06e-15 76.6
MS.gene39368.t1 AT3G49630 25.292 257 175 5 84 324 31 286 1.12e-15 77.8
MS.gene39368.t1 AT3G46500 27.138 269 167 11 61 307 9 270 1.51e-15 77.0
MS.gene39368.t1 AT3G46500 30.000 180 110 7 182 351 1 174 1.87e-14 71.6
MS.gene39368.t1 AT4G16765 34.711 121 68 4 236 350 75 190 1.26e-13 69.7
MS.gene39368.t1 AT1G35190 25.000 316 207 10 60 351 3 312 2.47e-13 70.9
MS.gene39368.t1 AT3G50210 32.317 164 97 7 167 319 47 207 3.97e-13 68.9
MS.gene39368.t1 AT3G49630 29.936 157 105 5 171 324 63 217 1.52e-12 67.4
MS.gene39368.t1 AT3G46500 30.519 154 97 5 158 303 41 192 1.93e-12 66.6
MS.gene39368.t1 AT4G16770 25.301 249 161 8 46 275 2 244 2.21e-11 63.9
MS.gene39368.t1 AT4G22870 31.000 100 65 2 256 354 2 98 6.02e-11 59.7

Find 74 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCATCAACAAAGCTTTA+TGG 0.142502 8.2:-81834765 MS.gene39368:CDS
TCTGATACTAATTCCTTTAT+AGG 0.174461 8.2:+81834741 None:intergenic
CTCATATCATTTAAATAGTT+TGG 0.183791 8.2:+81835483 None:intergenic
CGGAGCCATAAAACAGTAAA+AGG 0.282997 8.2:+81836040 None:intergenic
ATAGTTCACCGGCTGCTAAT+TGG 0.293403 8.2:-81836070 MS.gene39368:CDS
GAAACAAAAGATGGTGTTAA+AGG 0.318707 8.2:-81836434 MS.gene39368:CDS
TCCATGGCAAGAGGCCTTGA+TGG 0.349251 8.2:-81834666 MS.gene39368:CDS
CCTGAACCTGACTTGACTTT+GGG 0.349949 8.2:-81835414 MS.gene39368:CDS
AAAGCTTTATGGACCTATAA+AGG 0.358235 8.2:-81834754 MS.gene39368:CDS
AAAGTCATTATCAGTATGTT+TGG 0.361760 8.2:+81835386 None:intergenic
AAGATAATCCTCCAAAGTAT+AGG 0.371492 8.2:-81834719 MS.gene39368:CDS
TTCTTTCAAGTTGTTAATCA+TGG 0.373078 8.2:-81836227 MS.gene39368:CDS
AGATAATCCTCCAAAGTATA+GGG 0.390705 8.2:-81834718 MS.gene39368:CDS
CATACTGATGGTAAATCTTC+CGG 0.398989 8.2:+81836005 None:intergenic
ATGACTAGAGCACCATTAAC+AGG 0.400233 8.2:+81835291 None:intergenic
CCCAAAGTCAAGTCAGGTTC+AGG 0.412335 8.2:+81835414 None:intergenic
GATGGTAAATCTTCCGGATT+GGG 0.414025 8.2:+81836011 None:intergenic
TCCTGAACCTGACTTGACTT+TGG 0.416245 8.2:-81835415 MS.gene39368:CDS
GTTGATGTATCGCCTGTTAA+TGG 0.423499 8.2:-81835303 MS.gene39368:CDS
TCCAAGTTCTTCATGAAAAT+CGG 0.431534 8.2:-81835329 MS.gene39368:CDS
GGTCCATAAAGCTTTGTTGA+TGG 0.432082 8.2:+81834762 None:intergenic
AACAGAAGGAACAACAAGTT+TGG 0.432421 8.2:+81836331 None:intergenic
GTTGTTTCCCTATACTTTGG+AGG 0.436736 8.2:+81834711 None:intergenic
ACGTGATCCGGTGAAGCCTT+TGG 0.462405 8.2:-81836117 MS.gene39368:CDS
TGGTATAGAAGTGAGTGTTT+TGG 0.468631 8.2:-81836207 MS.gene39368:CDS
GTTGCTCCCAAAGTCAAGTC+AGG 0.472155 8.2:+81835408 None:intergenic
GTGCTTCTACAAGATCATAT+TGG 0.473573 8.2:-81835357 MS.gene39368:CDS
ACTGTTGTTTCCCTATACTT+TGG 0.480633 8.2:+81834708 None:intergenic
TGATGGTAAATCTTCCGGAT+TGG 0.481996 8.2:+81836010 None:intergenic
GGCTCCGAAGTCTCCCAATC+CGG 0.497545 8.2:-81836024 MS.gene39368:CDS
TAACATTGGTGATCTTCTAC+AGG 0.501928 8.2:-81835268 MS.gene39368:intron
TAGAGAAGCATCTGAGACAT+GGG 0.510313 8.2:-81836252 MS.gene39368:CDS
AGAATTATACACACGTGATC+CGG 0.515875 8.2:-81836129 MS.gene39368:CDS
CCGATACTCTTCGACCGACA+TGG 0.523409 8.2:+81834814 None:intergenic
AAGATTTACCATCAGTATGC+AGG 0.528722 8.2:-81836001 MS.gene39368:intron
TCCATCAAGGCCTCTTGCCA+TGG 0.529649 8.2:+81834665 None:intergenic
GGATTATGTTTCTTTCTCCA+TGG 0.531133 8.2:-81834682 MS.gene39368:CDS
TTATAAACCAAAGGCTTCAC+CGG 0.535396 8.2:+81836110 None:intergenic
AATGATATGAGATGCAATGA+GGG 0.539480 8.2:-81835471 MS.gene39368:CDS
GTTCACCGGCTGCTAATTGG+AGG 0.539887 8.2:-81836067 MS.gene39368:CDS
GTTTCTTTCTCCATGGCAAG+AGG 0.545237 8.2:-81834675 MS.gene39368:CDS
GTATAGGGAAACAACAGTGC+AGG 0.554541 8.2:-81834703 MS.gene39368:CDS
TCTTCCGGATTGGGAGACTT+CGG 0.566775 8.2:+81836020 None:intergenic
AAGTTCTTCATGAAAATCGG+TGG 0.569657 8.2:-81835326 MS.gene39368:CDS
AGTTTGGTGCTGTTGCTTGA+AGG 0.569774 8.2:+81836347 None:intergenic
ATTCTTTGAGCAAGATTCTG+AGG 0.571145 8.2:-81836159 MS.gene39368:CDS
CCATGTCGGTCGAAGAGTAT+CGG 0.572796 8.2:-81834814 MS.gene39368:CDS
GCATTTGATGAAACAAAAGA+TGG 0.578666 8.2:-81836443 MS.gene39368:CDS
CTAACATACCTGCATACTGA+TGG 0.582636 8.2:+81835993 None:intergenic
TTAGAGAAGCATCTGAGACA+TGG 0.588744 8.2:-81836253 MS.gene39368:CDS
TTCATCAAGATCCAACAAGA+AGG 0.589955 8.2:-81836295 MS.gene39368:CDS
TGCTTGCAGAGATATAATGC+TGG 0.590515 8.2:-81835577 MS.gene39368:intron
CTTCTACAAGATCATATTGG+CGG 0.596203 8.2:-81835354 MS.gene39368:CDS
GTATCCCTCCAATTAGCAGC+CGG 0.605779 8.2:+81836062 None:intergenic
AAATTACTATTATAAACCAA+AGG 0.606180 8.2:+81836101 None:intergenic
GAGTGTTGAGCACAGAGTGG+TGG 0.608516 8.2:-81834841 MS.gene39368:CDS
CAGGACACGAAGGATAGTAA+TGG 0.610611 8.2:+81835433 None:intergenic
AAATGATATGAGATGCAATG+AGG 0.612549 8.2:-81835472 MS.gene39368:CDS
AGTTCTTCATGAAAATCGGT+GGG 0.619127 8.2:-81835325 MS.gene39368:CDS
AGTCCTTGTCGAATTCGTGA+TGG 0.623298 8.2:+81836372 None:intergenic
GAGTTATTATCAGAAGCACT+TGG 0.624454 8.2:-81835513 MS.gene39368:CDS
GCAAAGGAGAAGTTCCATCA+AGG 0.628190 8.2:+81834652 None:intergenic
AATATGATCTTGTAGAAGCA+CGG 0.628871 8.2:+81835359 None:intergenic
AATTCGTGATGGAACATGCG+AGG 0.635817 8.2:+81836383 None:intergenic
ATTCGTGATGGAACATGCGA+GGG 0.637054 8.2:+81836384 None:intergenic
GGTGCTCTAGTCATTAACAT+TGG 0.639390 8.2:-81835282 MS.gene39368:CDS
TTCACCGGCTGCTAATTGGA+GGG 0.653841 8.2:-81836066 MS.gene39368:CDS
AGAGAAGCATCTGAGACATG+GGG 0.656233 8.2:-81836251 MS.gene39368:CDS
GGATGAGATGAAGAATGGAG+TGG 0.675495 8.2:-81836186 MS.gene39368:CDS
ATATCAACAAGATCAACAGA+AGG 0.684102 8.2:+81836317 None:intergenic
AGAGTGGTGGCAAACCATGT+CGG 0.690367 8.2:-81834828 MS.gene39368:CDS
CAAGAGTGTTGAGCACAGAG+TGG 0.704603 8.2:-81834844 MS.gene39368:CDS
GTTCCATCACGAATTCGACA+AGG 0.712452 8.2:-81836375 MS.gene39368:CDS
AAGTCAGGTTCAGGACACGA+AGG 0.726655 8.2:+81835423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTCAATTTTGAAATA+TGG + chr8.2:81836514-81836533 None:intergenic 10.0%
!!! ATTAAATTTTTTTAAATGAC+AGG + chr8.2:81835947-81835966 None:intergenic 10.0%
!!! TATAATTCTTTGAAATATTA+AGG + chr8.2:81835259-81835278 None:intergenic 10.0%
!! AAATTACTATTATAAACCAA+AGG + chr8.2:81835043-81835062 None:intergenic 15.0%
!! ATTTAATATCTATAACCTAA+CGG - chr8.2:81835960-81835979 MS.gene39368:intron 15.0%
!!! TAAGTTATAATCATTTTCAT+CGG - chr8.2:81836008-81836027 MS.gene39368:CDS 15.0%
!! ACATTGTAAAATTTGACATT+CGG - chr8.2:81836214-81836233 MS.gene39368:CDS 20.0%
!! CTCATATCATTTAAATAGTT+TGG + chr8.2:81835661-81835680 None:intergenic 20.0%
!! TGATATAATATGATTGAATG+TGG + chr8.2:81835484-81835503 None:intergenic 20.0%
!!! AAGTTATAATCATTTTCATC+GGG - chr8.2:81836009-81836028 MS.gene39368:CDS 20.0%
!!! TATAAAGTATTGTTTGTGAT+TGG - chr8.2:81836122-81836141 MS.gene39368:CDS 20.0%
! AAAATAAGATATCATGACTG+TGG - chr8.2:81835227-81835246 MS.gene39368:intron 25.0%
! AAACATTGAAAACTTTGATG+CGG - chr8.2:81835316-81835335 MS.gene39368:CDS 25.0%
! AAAGTCATTATCAGTATGTT+TGG + chr8.2:81835758-81835777 None:intergenic 25.0%
! ATAGTTGTGATTAAAGCTTT+AGG - chr8.2:81835527-81835546 MS.gene39368:CDS 25.0%
! GATACTATCTTGAATTTATC+CGG - chr8.2:81835383-81835402 MS.gene39368:CDS 25.0%
! TAATCTTGTATATTCATAGC+CGG + chr8.2:81835405-81835424 None:intergenic 25.0%
! TCTGATACTAATTCCTTTAT+AGG + chr8.2:81836403-81836422 None:intergenic 25.0%
! TTTAAATGACAGGATAAGAA+AGG + chr8.2:81835937-81835956 None:intergenic 25.0%
!! TTTTGATCTTTATAGTTCAC+CGG - chr8.2:81835060-81835079 MS.gene39368:intron 25.0%
!!! TCAATTTTGAAATATGGCAA+AGG + chr8.2:81836508-81836527 None:intergenic 25.0%
!!! TTCTTTCAAGTTGTTAATCA+TGG - chr8.2:81834914-81834933 MS.gene39368:intron 25.0%
AAATGATATGAGATGCAATG+AGG - chr8.2:81835669-81835688 MS.gene39368:intron 30.0%
AAGATAATCCTCCAAAGTAT+AGG - chr8.2:81836422-81836441 MS.gene39368:CDS 30.0%
AATATGATCTTGTAGAAGCA+CGG + chr8.2:81835785-81835804 None:intergenic 30.0%
AATGATATGAGATGCAATGA+GGG - chr8.2:81835670-81835689 MS.gene39368:intron 30.0%
AGATAATCCTCCAAAGTATA+GGG - chr8.2:81836423-81836442 MS.gene39368:CDS 30.0%
ATATCAACAAGATCAACAGA+AGG + chr8.2:81834827-81834846 None:intergenic 30.0%
GCATTTGATGAAACAAAAGA+TGG - chr8.2:81834698-81834717 MS.gene39368:CDS 30.0%
TATGATTGAATGTGGTTCAT+AGG + chr8.2:81835476-81835495 None:intergenic 30.0%
TCCAAGTTCTTCATGAAAAT+CGG - chr8.2:81835812-81835831 MS.gene39368:intron 30.0%
TTCATAGGTTACTGATAAGT+GGG + chr8.2:81835461-81835480 None:intergenic 30.0%
TTTCATCGTTGGATTGTTAA+AGG - chr8.2:81836061-81836080 MS.gene39368:CDS 30.0%
! AAAGCTTTATGGACCTATAA+AGG - chr8.2:81836387-81836406 MS.gene39368:CDS 30.0%
! ACAACTATTTTCCTTCTTGT+TGG + chr8.2:81834860-81834879 None:intergenic 30.0%
! GAAACAAAAGATGGTGTTAA+AGG - chr8.2:81834707-81834726 MS.gene39368:CDS 30.0%
! GGATACCTTTTACTGTTTTA+TGG - chr8.2:81835096-81835115 MS.gene39368:intron 30.0%
! TAAAACTTGTTTATGCCGTT+AGG + chr8.2:81835978-81835997 None:intergenic 30.0%
!!! ACAAGACATGTTTTGAAACT+TGG - chr8.2:81835592-81835611 MS.gene39368:intron 30.0%
AACAGAAGGAACAACAAGTT+TGG + chr8.2:81834813-81834832 None:intergenic 35.0%
AAGATTTACCATCAGTATGC+AGG - chr8.2:81835140-81835159 MS.gene39368:intron 35.0%
AAGTTCTTCATGAAAATCGG+TGG - chr8.2:81835815-81835834 MS.gene39368:intron 35.0%
AGAATTATACACACGTGATC+CGG - chr8.2:81835012-81835031 MS.gene39368:intron 35.0%
AGTTCTTCATGAAAATCGGT+GGG - chr8.2:81835816-81835835 MS.gene39368:intron 35.0%
ATTCTTTGAGCAAGATTCTG+AGG - chr8.2:81834982-81835001 MS.gene39368:intron 35.0%
CATACTGATGGTAAATCTTC+CGG + chr8.2:81835139-81835158 None:intergenic 35.0%
CTTCTACAAGATCATATTGG+CGG - chr8.2:81835787-81835806 MS.gene39368:intron 35.0%
GGATTATGTTTCTTTCTCCA+TGG - chr8.2:81836459-81836478 MS.gene39368:CDS 35.0%
GTGCTTCTACAAGATCATAT+TGG - chr8.2:81835784-81835803 MS.gene39368:intron 35.0%
GTTCATAGGTTACTGATAAG+TGG + chr8.2:81835462-81835481 None:intergenic 35.0%
TGCATGAGCATAGTGATTAT+TGG - chr8.2:81835202-81835221 MS.gene39368:intron 35.0%
TTATAAACCAAAGGCTTCAC+CGG + chr8.2:81835034-81835053 None:intergenic 35.0%
TTCATCAAGATCCAACAAGA+AGG - chr8.2:81834846-81834865 MS.gene39368:CDS 35.0%
! GACAGAGTAATTTTCATCGT+TGG - chr8.2:81836050-81836069 MS.gene39368:CDS 35.0%
! GATTTTCATGAAGAACTTGG+AGG + chr8.2:81835813-81835832 None:intergenic 35.0%
! TAACATTGGTGATCTTCTAC+AGG - chr8.2:81835873-81835892 MS.gene39368:intron 35.0%
! TGGTATAGAAGTGAGTGTTT+TGG - chr8.2:81834934-81834953 MS.gene39368:intron 35.0%
! TGTTTTCACGACTGTAGTTA+AGG + chr8.2:81835301-81835320 None:intergenic 35.0%
!! ACCGATTTTCATGAAGAACT+TGG + chr8.2:81835816-81835835 None:intergenic 35.0%
!! ACTGTTGTTTCCCTATACTT+TGG + chr8.2:81836436-81836455 None:intergenic 35.0%
!! GAGTTATTATCAGAAGCACT+TGG - chr8.2:81835628-81835647 MS.gene39368:intron 35.0%
!! GTTTTGGATGAGATGAAGAA+TGG - chr8.2:81834950-81834969 MS.gene39368:intron 35.0%
AATGTGACAACACAAGACTG+TGG + chr8.2:81836199-81836218 None:intergenic 40.0%
ATCCTAACCAACCACAATCT+TGG + chr8.2:81835345-81835364 None:intergenic 40.0%
CAGCCATCAACAAAGCTTTA+TGG - chr8.2:81836376-81836395 MS.gene39368:CDS 40.0%
CATTGAAAACTTTGATGCGG+TGG - chr8.2:81835319-81835338 MS.gene39368:CDS 40.0%
CGGAGCCATAAAACAGTAAA+AGG + chr8.2:81835104-81835123 None:intergenic 40.0%
CTAACATACCTGCATACTGA+TGG + chr8.2:81835151-81835170 None:intergenic 40.0%
GATGGTAAATCTTCCGGATT+GGG + chr8.2:81835133-81835152 None:intergenic 40.0%
GGTGCTCTAGTCATTAACAT+TGG - chr8.2:81835859-81835878 MS.gene39368:intron 40.0%
GTTGATGTATCGCCTGTTAA+TGG - chr8.2:81835838-81835857 MS.gene39368:intron 40.0%
TGATGGTAAATCTTCCGGAT+TGG + chr8.2:81835134-81835153 None:intergenic 40.0%
TGCTTGCAGAGATATAATGC+TGG - chr8.2:81835564-81835583 MS.gene39368:CDS 40.0%
TTTCACGACTGTAGTTAAGG+CGG + chr8.2:81835298-81835317 None:intergenic 40.0%
! ATGACTAGAGCACCATTAAC+AGG + chr8.2:81835853-81835872 None:intergenic 40.0%
! GTTGTTTCCCTATACTTTGG+AGG + chr8.2:81836433-81836452 None:intergenic 40.0%
!! GGTCCATAAAGCTTTGTTGA+TGG + chr8.2:81836382-81836401 None:intergenic 40.0%
!! TAGAGAAGCATCTGAGACAT+GGG - chr8.2:81834889-81834908 MS.gene39368:intron 40.0%
!! TTAGAGAAGCATCTGAGACA+TGG - chr8.2:81834888-81834907 MS.gene39368:intron 40.0%
AGTCCTTGTCGAATTCGTGA+TGG + chr8.2:81834772-81834791 None:intergenic 45.0%
CAGGACACGAAGGATAGTAA+TGG + chr8.2:81835711-81835730 None:intergenic 45.0%
CGAGCGCAGGACATAATTTA+GGG + chr8.2:81835429-81835448 None:intergenic 45.0%
GCAAAGGAGAAGTTCCATCA+AGG + chr8.2:81836492-81836511 None:intergenic 45.0%
GGATGAGATGAAGAATGGAG+TGG - chr8.2:81834955-81834974 MS.gene39368:intron 45.0%
GTATAGGGAAACAACAGTGC+AGG - chr8.2:81836438-81836457 MS.gene39368:CDS 45.0%
GTTCCATCACGAATTCGACA+AGG - chr8.2:81834766-81834785 MS.gene39368:CDS 45.0%
GTTTCTTTCTCCATGGCAAG+AGG - chr8.2:81836466-81836485 MS.gene39368:CDS 45.0%
TCGAGCGCAGGACATAATTT+AGG + chr8.2:81835430-81835449 None:intergenic 45.0%
! AATTCGTGATGGAACATGCG+AGG + chr8.2:81834761-81834780 None:intergenic 45.0%
! ATAGTTCACCGGCTGCTAAT+TGG - chr8.2:81835071-81835090 MS.gene39368:intron 45.0%
! ATTCGTGATGGAACATGCGA+GGG + chr8.2:81834760-81834779 None:intergenic 45.0%
! CCTGAACCTGACTTGACTTT+GGG - chr8.2:81835727-81835746 MS.gene39368:intron 45.0%
! TCCTGAACCTGACTTGACTT+TGG - chr8.2:81835726-81835745 MS.gene39368:intron 45.0%
!! AGAGAAGCATCTGAGACATG+GGG - chr8.2:81834890-81834909 MS.gene39368:intron 45.0%
!! AGTTTGGTGCTGTTGCTTGA+AGG + chr8.2:81834797-81834816 None:intergenic 45.0%
AAGTCAGGTTCAGGACACGA+AGG + chr8.2:81835721-81835740 None:intergenic 50.0%
AGAGTGGTGGCAAACCATGT+CGG - chr8.2:81836313-81836332 MS.gene39368:CDS 50.0%
CCCAAAGTCAAGTCAGGTTC+AGG + chr8.2:81835730-81835749 None:intergenic 50.0%
GTATCCCTCCAATTAGCAGC+CGG + chr8.2:81835082-81835101 None:intergenic 50.0%
GTTGCTCCCAAAGTCAAGTC+AGG + chr8.2:81835736-81835755 None:intergenic 50.0%
! CCATGTCGGTCGAAGAGTAT+CGG - chr8.2:81836327-81836346 MS.gene39368:CDS 50.0%
! GGCCAAGATTGTGGTTGGTT+AGG - chr8.2:81835340-81835359 MS.gene39368:CDS 50.0%
! TCTTCCGGATTGGGAGACTT+CGG + chr8.2:81835124-81835143 None:intergenic 50.0%
! TTCACCGGCTGCTAATTGGA+GGG - chr8.2:81835075-81835094 MS.gene39368:intron 50.0%
!! CAAGAGTGTTGAGCACAGAG+TGG - chr8.2:81836297-81836316 MS.gene39368:CDS 50.0%
ACGTGATCCGGTGAAGCCTT+TGG - chr8.2:81835024-81835043 MS.gene39368:intron 55.0%
CCGATACTCTTCGACCGACA+TGG + chr8.2:81836330-81836349 None:intergenic 55.0%
TCCATCAAGGCCTCTTGCCA+TGG + chr8.2:81836479-81836498 None:intergenic 55.0%
TCCATGGCAAGAGGCCTTGA+TGG - chr8.2:81836475-81836494 MS.gene39368:CDS 55.0%
TGATGCGGTGGCCAAGATTG+TGG - chr8.2:81835331-81835350 MS.gene39368:CDS 55.0%
! GTTCACCGGCTGCTAATTGG+AGG - chr8.2:81835074-81835093 MS.gene39368:intron 55.0%
!! GAGTGTTGAGCACAGAGTGG+TGG - chr8.2:81836300-81836319 MS.gene39368:CDS 55.0%
GCGGTGGCCAAGATTGTGGT+TGG - chr8.2:81835335-81835354 MS.gene39368:CDS 60.0%
GGCTCCGAAGTCTCCCAATC+CGG - chr8.2:81835117-81835136 MS.gene39368:intron 60.0%
TGGGCGAGTCACTCGAGCGC+AGG + chr8.2:81835442-81835461 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 81834626 81836537 81834626 ID=MS.gene39368
chr8.2 mRNA 81834626 81836537 81834626 ID=MS.gene39368.t1;Parent=MS.gene39368
chr8.2 exon 81836002 81836537 81836002 ID=MS.gene39368.t1.exon1;Parent=MS.gene39368.t1
chr8.2 CDS 81836002 81836537 81836002 ID=cds.MS.gene39368.t1;Parent=MS.gene39368.t1
chr8.2 exon 81835269 81835590 81835269 ID=MS.gene39368.t1.exon2;Parent=MS.gene39368.t1
chr8.2 CDS 81835269 81835590 81835269 ID=cds.MS.gene39368.t1;Parent=MS.gene39368.t1
chr8.2 exon 81834626 81834886 81834626 ID=MS.gene39368.t1.exon3;Parent=MS.gene39368.t1
chr8.2 CDS 81834626 81834886 81834626 ID=cds.MS.gene39368.t1;Parent=MS.gene39368.t1
Gene Sequence

>MS.gene39368

ATGGAAATCTCTAAAAACAATGAAATTTCATTGACATCAAAACATGACTATGATAGAGCAAGTGAGCTCAAAGCATTTGATGAAACAAAAGATGGTGTTAAAGGACTTGTTGATGCTTCTGTCACAAGCATCCCTCGCATGTTCCATCACGAATTCGACAAGGACTCACCTTCAAGCAACAGCACCAAACTTGTTGTTCCTTCTGTTGATCTTGTTGATATTCATCAAGATCCAACAAGAAGGAAAATAGTTGTTGAGAAAATTAGAGAAGCATCTGAGACATGGGGATTCTTTCAAGTTGTTAATCATGGTATAGAAGTGAGTGTTTTGGATGAGATGAAGAATGGAGTGGTTAGATTCTTTGAGCAAGATTCTGAGGTGAAAAGAGAATTATACACACGTGATCCGGTGAAGCCTTTGGTTTATAATAGTAATTTTGATCTTTATAGTTCACCGGCTGCTAATTGGAGGGATACCTTTTACTGTTTTATGGCTCCGAAGTCTCCCAATCCGGAAGATTTACCATCAGTATGCAGGTATGTTAGATGTAATATATAATTTTATTAGATTAACTCTTGCATGAGCATAGTGATTATTGGAAAAAATAAGATATCATGACTGTGGCGCAATCCTTAATATTTCAAAGAATTATAGTCAAATGAGATTATACCGCCTTAACTACAGTCGTGAAAACATTGAAAACTTTGATGCGGTGGCCAAGATTGTGGTTGGTTAGGATTAGTGAAGAAATTATTTTGATACTATCTTGAATTTATCCGGCTATGAATATACAAGATTATCCCTAAATTATGTCCTGCGCTCGAGTGACTCGCCCACTTATCAGTAACCTATGAACCACATTCAATCATATTATATCATATCTTTGTAGTAGATTTTGATAATAGTTGTGATTAAAGCTTTAGGATATTATGTGCGTATGCTTGCAGAGATATAATGCTGGAATACACAAGACATGTTTTGAAACTTGGAAATGTATTGTTTGAGTTATTATCAGAAGCACTTGGACTTGATCCAAACTATTTAAATGATATGAGATGCAATGAGGGAATTGCACTTGTTTGCCATTACTATCCTTCGTGTCCTGAACCTGACTTGACTTTGGGAGCAACCAAACATACTGATAATGACTTTATCACCGTGCTTCTACAAGATCATATTGGCGGCCTCCAAGTTCTTCATGAAAATCGGTGGGTTGATGTATCGCCTGTTAATGGTGCTCTAGTCATTAACATTGGTGATCTTCTACAGGTAAGTTTTGATCTTTTGATTATGATCTTAATATTCATGCCTTTCTTATCCTGTCATTTAAAAAAATTTAATATCTATAACCTAACGGCATAAACAAGTTTTATGCACGCTTTTAAGTTATAATCATTTTCATCGGGATTTAATTGATATACACTGACAGAGTAATTTTCATCGTTGGATTGTTAAAGGAACTTGACTCTAATTCTATTTATTTACTTTAAAAGTCATATAAAGTATTGTTTGTGATTGGTTGAAAGTGTAAAAAGTGTTACACTGACTGTGCATAAAAATTATTCTCATTCCACAGTCTTGTGTTGTCACATTGTAAAATTTGACATTCGGATTTTCTCTATTAACTAATCAACAATTTTCATTGAAACAGCTTATTACAAATGACAAATTCAAGAGTGTTGAGCACAGAGTGGTGGCAAACCATGTCGGTCGAAGAGTATCGGTTGCAAGCTTTTATAGCACAAGTTTTCAGCCATCAACAAAGCTTTATGGACCTATAAAGGAATTAGTATCAGAAGATAATCCTCCAAAGTATAGGGAAACAACAGTGCAGGATTATGTTTCTTTCTCCATGGCAAGAGGCCTTGATGGAACTTCTCCTTTGCCATATTTCAAAATTGAAAATTTCTGA
Protein sequence

>MS.gene39368.t1

MEISKNNEISLTSKHDYDRASELKAFDETKDGVKGLVDASVTSIPRMFHHEFDKDSPSSNSTKLVVPSVDLVDIHQDPTRRKIVVEKIREASETWGFFQVVNHGIEVSVLDEMKNGVVRFFEQDSEVKRELYTRDPVKPLVYNSNFDLYSSPAANWRDTFYCFMAPKSPNPEDLPSVCRDIMLEYTRHVLKLGNVLFELLSEALGLDPNYLNDMRCNEGIALVCHYYPSCPEPDLTLGATKHTDNDFITVLLQDHIGGLQVLHENRWVDVSPVNGALVINIGDLLQLITNDKFKSVEHRVVANHVGRRVSVASFYSTSFQPSTKLYGPIKELVSEDNPPKYRETTVQDYVSFSMARGLDGTSPLPYFKIENF