AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040673

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040673.t1 MTR_1g050740 98.848 781 8 1 1 780 1 781 0.0 1602
MS.gene040673.t1 MTR_7g089950 70.813 812 185 12 1 780 1 792 0.0 1129
MS.gene040673.t1 MTR_3g014650 61.982 797 224 17 8 780 33 774 0.0 944
MS.gene040673.t1 MTR_8g039100 61.168 788 251 14 6 780 6 751 0.0 934
MS.gene040673.t1 MTR_3g073100 49.461 742 296 12 55 779 52 731 0.0 662
MS.gene040673.t1 MTR_3g073100 36.842 114 68 1 47 160 137 246 3.20e-14 77.0
MS.gene040673.t1 MTR_3g097260 49.384 731 288 14 55 779 50 704 0.0 631
MS.gene040673.t1 MTR_1g062740 43.495 784 365 16 56 776 47 815 0.0 605
MS.gene040673.t1 MTR_5g459450 48.350 697 304 16 106 779 69 732 0.0 572
MS.gene040673.t1 MTR_5g459450 62.424 165 62 0 55 219 64 228 6.04e-66 234
MS.gene040673.t1 MTR_8g088930 39.719 783 376 16 56 774 9 759 0.0 547
MS.gene040673.t1 MTR_8g088930 39.496 119 72 0 54 172 76 194 1.54e-18 90.9
MS.gene040673.t1 MTR_8g088930 39.668 784 376 16 56 774 9 760 0.0 546
MS.gene040673.t1 MTR_8g088930 39.496 119 72 0 54 172 76 194 1.53e-18 90.9
MS.gene040673.t1 MTR_8g095170 45.333 675 319 13 123 779 24 666 1.07e-175 520
MS.gene040673.t1 MTR_8g095170 58.659 179 72 2 58 235 28 205 9.13e-64 226
MS.gene040673.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 8.06e-11 65.9
MS.gene040673.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 2.70e-157 473
MS.gene040673.t1 MTR_8g088930 39.496 119 72 0 54 172 76 194 1.48e-18 90.9
MS.gene040673.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 3.50e-157 473
MS.gene040673.t1 MTR_8g088930 39.496 119 72 0 54 172 76 194 1.56e-18 90.9
MS.gene040673.t1 MTR_8g095170 45.640 539 255 11 123 643 24 542 8.42e-139 422
MS.gene040673.t1 MTR_8g095170 58.659 179 72 2 58 235 28 205 1.42e-63 223
MS.gene040673.t1 MTR_8g080860 39.674 184 111 0 56 239 16 199 5.42e-35 135
MS.gene040673.t1 MTR_8g080860 35.758 165 104 1 54 216 104 268 5.31e-24 103
MS.gene040673.t1 MTR_8g080860 35.507 138 89 0 59 196 134 271 2.49e-17 83.6
MS.gene040673.t1 MTR_8g080860 39.674 184 111 0 56 239 12 195 7.50e-35 134
MS.gene040673.t1 MTR_8g080860 35.758 165 104 1 54 216 100 264 7.10e-24 102
MS.gene040673.t1 MTR_8g080860 35.507 138 89 0 59 196 130 267 3.36e-17 83.2
MS.gene040673.t1 MTR_4g107460 34.434 212 137 1 35 244 29 240 4.81e-32 128
MS.gene040673.t1 MTR_4g107460 37.778 180 111 1 62 240 11 190 3.82e-30 122
MS.gene040673.t1 MTR_4g107460 34.722 144 94 0 62 205 104 247 2.42e-20 93.6
MS.gene040673.t1 MTR_4g107460 39.000 100 60 1 148 246 5 104 4.52e-11 65.5
MS.gene040673.t1 MTR_8g092090 32.692 208 130 2 50 247 20 227 4.54e-29 117
MS.gene040673.t1 MTR_8g092090 30.726 179 113 1 38 205 53 231 3.18e-20 91.3
MS.gene040673.t1 MTR_8g092090 27.222 180 100 2 98 246 1 180 6.64e-15 75.5
MS.gene040673.t1 MTR_6g043150 38.021 192 118 1 57 247 7 198 1.99e-28 117
MS.gene040673.t1 MTR_6g043150 36.239 218 114 2 54 246 71 288 8.84e-28 115
MS.gene040673.t1 MTR_6g043150 36.813 182 115 0 54 235 142 323 1.44e-23 102
MS.gene040673.t1 MTR_6g043150 30.380 237 154 2 21 246 75 311 2.50e-21 96.3
MS.gene040673.t1 MTR_6g043150 43.103 116 66 0 54 169 211 326 3.95e-19 89.7
MS.gene040673.t1 MTR_8g007500 33.161 193 125 1 57 245 194 386 1.05e-26 114
MS.gene040673.t1 MTR_7g451440 33.161 193 125 1 57 245 189 381 1.29e-26 114
MS.gene040673.t1 MTR_7g451440 33.673 196 123 2 81 273 190 381 9.75e-22 99.4
MS.gene040673.t1 MTR_5g010840 34.071 226 111 2 59 246 111 336 3.23e-26 112
MS.gene040673.t1 MTR_5g010840 33.511 188 117 1 54 241 175 354 7.68e-25 108
MS.gene040673.t1 MTR_5g010840 38.793 116 71 0 45 160 250 365 3.69e-17 84.7
MS.gene040673.t1 MTR_5g010840 31.973 147 91 2 106 251 112 250 1.97e-13 73.2
MS.gene040673.t1 MTR_5g010840 30.323 155 108 0 55 209 214 368 4.59e-13 72.0
MS.gene040673.t1 MTR_8g080350 32.314 229 116 3 59 249 125 352 8.29e-26 110
MS.gene040673.t1 MTR_8g080350 31.544 149 87 2 54 187 189 337 8.99e-14 74.3
MS.gene040673.t1 MTR_8g080350 24.014 279 161 8 55 284 52 328 1.26e-11 67.8
MS.gene040673.t1 MTR_4g099180 33.846 195 124 1 47 236 154 348 1.15e-25 110
MS.gene040673.t1 MTR_4g099180 31.126 151 97 1 104 254 170 313 1.70e-14 77.0
MS.gene040673.t1 MTR_2g078470 32.018 228 109 2 60 241 79 306 7.60e-25 107
MS.gene040673.t1 MTR_2g078470 30.901 233 160 1 54 285 142 374 1.45e-23 103
MS.gene040673.t1 MTR_2g078470 34.579 214 117 1 56 246 6 219 6.87e-22 99.0
MS.gene040673.t1 MTR_2g078470 33.152 184 123 0 58 241 54 237 4.07e-21 96.7
MS.gene040673.t1 MTR_2g078470 33.133 166 111 0 82 247 9 174 3.31e-14 75.5
MS.gene040673.t1 MTR_3g005910 64.865 74 24 1 502 575 1 72 1.26e-24 98.2
MS.gene040673.t1 MTR_8g080340 38.298 141 86 1 56 196 16 155 3.58e-24 100
MS.gene040673.t1 MTR_8g080340 39.695 131 77 2 87 216 23 152 1.46e-20 90.1
MS.gene040673.t1 MTR_8g080340 35.507 138 89 0 107 244 20 157 3.59e-17 80.1
MS.gene040673.t1 MTR_8g080340 30.128 156 102 3 133 288 23 171 3.06e-15 74.7
MS.gene040673.t1 MTR_8g095240 34.673 199 97 2 65 230 9 207 1.76e-23 104
MS.gene040673.t1 MTR_8g095240 29.437 231 125 4 59 251 118 348 6.17e-17 84.3
MS.gene040673.t1 MTR_5g058920 30.131 229 153 2 6 230 142 367 3.64e-23 103
MS.gene040673.t1 MTR_5g058920 37.500 128 80 0 62 189 245 372 3.21e-18 88.6
MS.gene040673.t1 MTR_5g058920 33.540 161 107 0 81 241 195 355 4.16e-18 88.2
MS.gene040673.t1 MTR_5g058920 33.099 142 95 0 105 246 196 337 5.26e-13 72.4
MS.gene040673.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 1.02e-22 101
MS.gene040673.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.36e-14 77.0
MS.gene040673.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 1.90e-22 101
MS.gene040673.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.75e-14 77.0
MS.gene040673.t1 MTR_8g080310 33.557 149 99 0 82 230 9 157 2.79e-19 85.9
MS.gene040673.t1 MTR_8g080310 33.566 143 95 0 65 207 15 157 8.32e-17 79.0
MS.gene040673.t1 MTR_8g080310 33.099 142 95 0 99 240 3 144 2.10e-16 77.8
MS.gene040673.t1 MTR_4g099180 34.286 140 87 1 47 181 154 293 1.14e-16 82.0
MS.gene040673.t1 MTR_4g099180 31.452 124 85 0 104 227 170 293 5.44e-13 71.2
MS.gene040673.t1 MTR_4g099180 35.000 140 86 1 47 181 154 293 1.66e-16 82.0
MS.gene040673.t1 MTR_4g099180 30.645 124 86 0 104 227 170 293 2.43e-12 69.3
MS.gene040673.t1 MTR_3g023310 35.433 127 69 2 73 199 9 122 1.48e-13 70.1
MS.gene040673.t1 MTR_8g092410 32.331 133 86 3 96 224 145 277 4.51e-13 72.0
MS.gene040673.t1 MTR_8g092410 37.190 121 71 3 60 176 156 275 1.53e-11 67.4
MS.gene040673.t1 MTR_8g092410 29.747 158 92 4 98 248 133 278 4.35e-11 65.9
MS.gene040673.t1 MTR_1g112280 26.512 215 113 5 17 211 552 741 2.07e-12 71.2
MS.gene040673.t1 MTR_1g097110 33.831 201 105 11 456 639 1314 1503 1.55e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040673.t1 AT3G56960 68.250 800 213 10 1 780 1 779 0.0 1127
MS.gene040673.t1 AT3G56960 68.250 800 213 10 1 780 1 779 0.0 1127
MS.gene040673.t1 AT2G41210 68.388 794 214 9 2 780 1 772 0.0 1124
MS.gene040673.t1 AT3G07960 66.667 744 188 12 51 780 18 715 0.0 1008
MS.gene040673.t1 AT3G07960 64.715 649 169 12 51 685 18 620 0.0 841
MS.gene040673.t1 AT3G07960 65.595 622 159 10 51 658 18 598 0.0 825
MS.gene040673.t1 AT3G07960 65.595 622 159 10 51 658 18 598 0.0 825
MS.gene040673.t1 AT1G77740 53.753 746 260 14 55 779 72 753 0.0 733
MS.gene040673.t1 AT1G77740 40.000 90 54 0 49 138 158 247 1.36e-15 81.6
MS.gene040673.t1 AT1G77740 53.753 746 260 14 55 779 72 753 0.0 733
MS.gene040673.t1 AT1G77740 40.000 90 54 0 49 138 158 247 1.36e-15 81.6
MS.gene040673.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 591
MS.gene040673.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 591
MS.gene040673.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 591
MS.gene040673.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 591
MS.gene040673.t1 AT1G21980 48.773 693 294 14 130 779 77 751 0.0 581
MS.gene040673.t1 AT1G21980 61.798 178 68 0 55 232 71 248 6.82e-72 250
MS.gene040673.t1 AT1G21980 40.000 85 51 0 54 138 162 246 3.92e-14 77.0
MS.gene040673.t1 AT1G60890 40.180 779 398 12 55 780 18 781 0.0 574
MS.gene040673.t1 AT1G60890 40.102 783 401 12 51 780 2 769 0.0 574
MS.gene040673.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 547
MS.gene040673.t1 AT1G10900 35.664 143 92 0 98 240 3 145 1.99e-18 90.9
MS.gene040673.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 547
MS.gene040673.t1 AT1G10900 35.664 143 92 0 98 240 3 145 1.99e-18 90.9
MS.gene040673.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 547
MS.gene040673.t1 AT1G10900 35.664 143 92 0 98 240 3 145 1.99e-18 90.9
MS.gene040673.t1 AT2G26420 45.495 677 316 13 130 779 54 704 2.80e-175 520
MS.gene040673.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.82e-63 226
MS.gene040673.t1 AT2G26420 45.723 678 327 14 130 779 54 718 1.17e-174 519
MS.gene040673.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.51e-63 226
MS.gene040673.t1 AT2G26420 45.723 678 327 14 130 779 54 718 1.17e-174 519
MS.gene040673.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.51e-63 226
MS.gene040673.t1 AT4G01190 35.878 393 193 7 429 776 12 390 4.31e-69 233
MS.gene040673.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.88e-69 233
MS.gene040673.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.88e-69 233
MS.gene040673.t1 AT1G01460 41.629 221 124 3 422 642 13 228 1.28e-50 183
MS.gene040673.t1 AT1G01460 42.574 101 44 2 687 779 328 422 3.38e-16 82.4
MS.gene040673.t1 AT1G77660 32.086 187 127 0 44 230 162 348 2.07e-25 110
MS.gene040673.t1 AT1G77660 32.386 176 119 0 77 252 172 347 2.28e-19 92.0
MS.gene040673.t1 AT1G77660 37.500 128 80 0 62 189 226 353 8.47e-19 90.1
MS.gene040673.t1 AT2G35170 33.333 186 124 0 63 248 229 414 8.89e-25 109
MS.gene040673.t1 AT2G35170 33.193 238 143 7 58 294 210 432 1.29e-21 99.8
MS.gene040673.t1 AT1G21920 34.706 170 111 0 61 230 175 344 2.07e-24 106
MS.gene040673.t1 AT1G21920 32.632 190 124 1 77 266 168 353 9.97e-19 89.4
MS.gene040673.t1 AT1G21920 34.559 136 89 0 54 189 214 349 1.83e-17 85.5
MS.gene040673.t1 AT1G21920 34.706 170 111 0 61 230 175 344 2.09e-24 107
MS.gene040673.t1 AT1G21920 32.632 190 124 1 77 266 168 353 1.40e-18 89.4
MS.gene040673.t1 AT1G21920 34.559 136 89 0 54 189 214 349 2.25e-17 85.9
MS.gene040673.t1 AT4G17080 32.941 170 114 0 61 230 258 427 4.98e-24 107
MS.gene040673.t1 AT4G17080 28.889 225 148 2 66 287 249 464 7.04e-22 100
MS.gene040673.t1 AT4G17080 34.014 147 97 0 65 211 285 431 3.76e-20 95.1
MS.gene040673.t1 AT1G75010 32.061 131 80 3 88 211 602 730 4.50e-13 73.6

Find 232 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGCCTCTTTGATTTCTT+TGG 0.110171 1.2:+33755281 None:intergenic
AATGGAGGAATGGGAGTATT+TGG 0.173763 1.2:-33755850 MS.gene040673:CDS
AATTTAGATCAAGATCTTTA+AGG 0.179870 1.2:+33754215 None:intergenic
TTACATTGTGTCAAGTTAAA+TGG 0.204066 1.2:-33754520 MS.gene040673:CDS
AAGCGTGCAAATAGCATATT+TGG 0.241003 1.2:-33756325 MS.gene040673:CDS
TACTAATGGGGATACTTATA+AGG 0.245430 1.2:-33756014 MS.gene040673:CDS
CAAGTGATAGAATGCATTTA+TGG 0.272504 1.2:-33755445 MS.gene040673:CDS
TAGATGGGCAAGTATCAAAT+TGG 0.272979 1.2:-33753621 MS.gene040673:CDS
ATGGAGGAATGGGAGTATTT+GGG 0.273175 1.2:-33755849 MS.gene040673:CDS
TTGATTCCAAAGAGAAAGTA+TGG 0.274808 1.2:-33755055 MS.gene040673:CDS
GTTCATTTGTTTGGAGTAAT+GGG 0.280218 1.2:-33755820 MS.gene040673:CDS
CGGATGTGGAGGCGTATATT+TGG 0.281881 1.2:+33755010 None:intergenic
TCTAGTCCATACTTTCTCTT+TGG 0.288381 1.2:+33755049 None:intergenic
GGAAGGTTCACTTGGCCTTC+AGG 0.290540 1.2:-33756097 MS.gene040673:CDS
AAAATTCCCTCAGAACTCTT+AGG 0.292562 1.2:-33754866 MS.gene040673:intron
CGACAGGGACTGTGAGCTTC+TGG 0.298065 1.2:-33754008 MS.gene040673:CDS
AAATGGACCTTCTCAGAAAA+AGG 0.301997 1.2:-33754503 MS.gene040673:intron
CAGGTACGATTTATCATAAT+GGG 0.302975 1.2:-33754346 MS.gene040673:CDS
TCAGGTACGATTTATCATAA+TGG 0.305456 1.2:-33754347 MS.gene040673:intron
GGGAAGATGGTTTGCCTAAA+GGG 0.309677 1.2:-33755778 MS.gene040673:CDS
TCTGGAACAGGAGGGAATTA+TGG 0.310567 1.2:-33753990 MS.gene040673:CDS
GAAGGAGATCTTATTCCTTC+AGG 0.311223 1.2:-33753923 MS.gene040673:CDS
CTCATGCTCAATTTACAATT+AGG 0.312912 1.2:-33755224 MS.gene040673:CDS
AGAATGGAGAAGAGGTTTGC+AGG 0.317757 1.2:-33755921 MS.gene040673:CDS
TTGAAAGTTCCATTCCCTTT+AGG 0.322935 1.2:+33755764 None:intergenic
GGAGTTCAAGAGTGGTTATA+TGG 0.324022 1.2:-33756059 MS.gene040673:CDS
AAGATGAGAACTATTATATT+GGG 0.327508 1.2:-33755874 MS.gene040673:CDS
GGAATAGGTATGATGGCTAT+TGG 0.329268 1.2:-33755799 MS.gene040673:CDS
TCAATTTACAATTAGGAATC+AGG 0.332752 1.2:-33755217 MS.gene040673:intron
AAAGATGAGAACTATTATAT+TGG 0.343138 1.2:-33755875 MS.gene040673:CDS
GGGGTAAAGGTTCATTTGTT+TGG 0.347168 1.2:-33755829 MS.gene040673:CDS
CGCAAGAGGGTCATCTTGAT+TGG 0.353038 1.2:-33755649 MS.gene040673:CDS
AACTTCTGCTAGATCCTTCC+AGG 0.357718 1.2:-33753724 MS.gene040673:intron
TTGTTTGGAGTAATGGGAAT+AGG 0.360376 1.2:-33755814 MS.gene040673:CDS
ATTCTTGTGTCCTTTGCATA+TGG 0.366334 1.2:+33755253 None:intergenic
AGGCGTATATTTGGATCCTT+CGG 0.367813 1.2:+33755019 None:intergenic
GTGCATACACTGCTACTAAT+GGG 0.376993 1.2:-33756027 MS.gene040673:CDS
GGTTCATTTGTTTGGAGTAA+TGG 0.378193 1.2:-33755821 MS.gene040673:CDS
GGTGCATACACTGCTACTAA+TGG 0.379224 1.2:-33756028 MS.gene040673:CDS
GCATCCACTGACATTCTTCT+CGG 0.385623 1.2:+33755497 None:intergenic
GATTTGAAGGGTTCTTCACT+TGG 0.386077 1.2:-33754283 MS.gene040673:CDS
CAGGGCATCATTTCCACATA+TGG 0.394680 1.2:+33754806 None:intergenic
GAGATAAGTATGAGGGAGAA+TGG 0.398925 1.2:-33755937 MS.gene040673:CDS
GGCGTATATTTGGATCCTTC+GGG 0.400723 1.2:+33755020 None:intergenic
ATCGTATTGAATGGACTTAT+AGG 0.403130 1.2:+33753439 None:intergenic
GGTGCTTTCAAAGTTTGTCT+TGG 0.403471 1.2:+33755302 None:intergenic
GAATAGGTATGATGGCTATT+GGG 0.408479 1.2:-33755798 MS.gene040673:CDS
CATGTCTTCTCGTGAAATAC+GGG 0.411112 1.2:+33753751 None:intergenic
CCTGTATAGTAATCTCCATT+AGG 0.413799 1.2:+33756220 None:intergenic
CCATGTCTTCTCGTGAAATA+CGG 0.420600 1.2:+33753750 None:intergenic
TATGTTCCACTCTGATCTCT+TGG 0.423850 1.2:+33755698 None:intergenic
GTTTCAGTAATCTCTGACTC+AGG 0.427126 1.2:+33754244 None:intergenic
CTGCGCGAACTTTCTTCGCC+AGG 0.428848 1.2:-33754786 MS.gene040673:CDS
GGACTGTGAGCTTCTGGAAC+AGG 0.430564 1.2:-33754002 MS.gene040673:CDS
TATTTCGACTACAACGATCT+TGG 0.431632 1.2:-33754189 MS.gene040673:CDS
ATCCGTCCAGTGAGTTCAAA+TGG 0.435350 1.2:-33754992 MS.gene040673:CDS
CCTAATGGAGATTACTATAC+AGG 0.435723 1.2:-33756220 MS.gene040673:CDS
GAATGCATTTATGGGGCGGC+GGG 0.442405 1.2:-33755436 MS.gene040673:CDS
TTATGTAGGTAATTGGAGTA+AGG 0.442669 1.2:-33755723 MS.gene040673:CDS
TTCAAATTTAGGTGATTCAG+AGG 0.443051 1.2:-33753786 MS.gene040673:intron
GCAGAGAGGGTTCTACCTAA+TGG 0.444056 1.2:-33756235 MS.gene040673:CDS
TCCCTCATACTTATCTCCAT+TGG 0.444973 1.2:+33755943 None:intergenic
ACGGGAAAGGGAAGTACTTA+TGG 0.445335 1.2:-33756174 MS.gene040673:CDS
AAGTGATAGAATGCATTTAT+GGG 0.445755 1.2:-33755444 MS.gene040673:CDS
ACCAAAGAAATCAAAGAGGC+AGG 0.446584 1.2:-33755282 MS.gene040673:CDS
ACATAGACGCTTTGATTTGA+AGG 0.448858 1.2:-33754296 MS.gene040673:CDS
ACCTCATAGTACTCTCCAAT+TGG 0.449728 1.2:+33753527 None:intergenic
CAAATCAAAGCGTCTATGTA+TGG 0.450308 1.2:+33754300 None:intergenic
CATTTATGGGGCGGCGGGGA+AGG 0.451650 1.2:-33755431 MS.gene040673:CDS
AAGGGAATGGAACTTTCAAA+TGG 0.453903 1.2:-33755760 MS.gene040673:CDS
GAAGGTTCACTTGGCCTTCA+GGG 0.454967 1.2:-33756096 MS.gene040673:CDS
TATGATGGCTATTGGGAAGA+TGG 0.455519 1.2:-33755791 MS.gene040673:CDS
ATATTGGGGAATGGAGGAAT+GGG 0.458059 1.2:-33755859 MS.gene040673:CDS
TATATTGGGGAATGGAGGAA+TGG 0.460284 1.2:-33755860 MS.gene040673:CDS
AGGGAATGGAACTTTCAAAT+GGG 0.460804 1.2:-33755759 MS.gene040673:CDS
TGGGAAGATGGTTTGCCTAA+AGG 0.464773 1.2:-33755779 MS.gene040673:CDS
AGTGGTTATATGGATGGAAT+AGG 0.464894 1.2:-33756049 MS.gene040673:CDS
CTCTTGCGATTGCGATGACC+CGG 0.466168 1.2:+33755664 None:intergenic
CATAAATGCATTCTATCACT+TGG 0.466407 1.2:+33755446 None:intergenic
AGAAGAATGTCAGTGGATGC+AGG 0.469195 1.2:-33755494 MS.gene040673:CDS
GAAGGAATAAGATCTCCTTC+TGG 0.470635 1.2:+33753926 None:intergenic
GGATCTCATACTCCACTTGA+TGG 0.471875 1.2:-33753902 MS.gene040673:intron
AACTCATGATCATCTTTAGT+TGG 0.472630 1.2:+33755356 None:intergenic
GAGATTACTATACAGGAGAA+TGG 0.473008 1.2:-33756213 MS.gene040673:CDS
TCATTGTCTTAATCATATAA+CGG 0.474615 1.2:+33754727 None:intergenic
AATCATATAACGGTCATCAT+TGG 0.476059 1.2:+33754737 None:intergenic
CCTTCAGGGCCAGCTTATGA+AGG 0.476989 1.2:-33756082 MS.gene040673:CDS
CCGTATTTCACGAGAAGACA+TGG 0.478125 1.2:-33753750 MS.gene040673:CDS
AACTCTTAGGAAGCTATTCA+AGG 0.480921 1.2:-33754853 MS.gene040673:CDS
TATGAGGGAGAATGGAGAAG+AGG 0.482458 1.2:-33755929 MS.gene040673:CDS
AAAGATGATCATGAGTTGCT+TGG 0.483527 1.2:-33755350 MS.gene040673:CDS
ATAACTTCCCGCACGGGAAA+GGG 0.484725 1.2:-33756186 MS.gene040673:CDS
GTCCTTCCATTTGAACTCAC+TGG 0.484867 1.2:+33754986 None:intergenic
CGAAAATGATTGTAATAAGC+GGG 0.486540 1.2:+33754580 None:intergenic
ACTGTCCTTTCAACCCGTGC+TGG 0.490246 1.2:+33753587 None:intergenic
TGGATCAACGGCTGATATTG+AGG 0.491601 1.2:+33753412 None:intergenic
TGAGGTTGGATCGTATTGAA+TGG 0.491626 1.2:+33753430 None:intergenic
AGTACTTCCCTTTCCCGTGC+GGG 0.493055 1.2:+33756179 None:intergenic
GATAACTTCCCGCACGGGAA+AGG 0.493289 1.2:-33756187 MS.gene040673:CDS
ATGATCTCAGGCAAATCGAC+AGG 0.493715 1.2:-33754024 MS.gene040673:intron
GATGGTAATAGAACTCCAAC+TGG 0.495992 1.2:-33755407 MS.gene040673:CDS
ACTAATGGGGATACTTATAA+GGG 0.499615 1.2:-33756013 MS.gene040673:CDS
CCTTCATAAGCTGGCCCTGA+AGG 0.503732 1.2:+33756082 None:intergenic
AGTGAGTATCAAGTTAGTCC+TGG 0.511916 1.2:-33755599 MS.gene040673:CDS
ACTGGTAATAGAACTCCAAC+TGG 0.513152 1.2:-33755389 MS.gene040673:CDS
AATGGGAGTATTTGGGGTAA+AGG 0.513194 1.2:-33755842 MS.gene040673:CDS
TCGAAAATGATTGTAATAAG+CGG 0.514277 1.2:+33754579 None:intergenic
TTGAACTCCCCTTCATAAGC+TGG 0.515591 1.2:+33756073 None:intergenic
TCAAGTTAGTCCTGGGGAGA+AGG 0.516462 1.2:-33755591 MS.gene040673:CDS
AGATGGGCAAGTATCAAATT+GGG 0.517493 1.2:-33753620 MS.gene040673:CDS
GGAACATATTATCCTTCTCC+CGG 0.517707 1.2:-33755683 MS.gene040673:CDS
GCAAGAGGGTCATCTTGATT+GGG 0.517961 1.2:-33755648 MS.gene040673:CDS
TTCCAATGGAGATAAGTATG+AGG 0.518960 1.2:-33755945 MS.gene040673:CDS
TCAACGGCTGATATTGAGGT+TGG 0.519212 1.2:+33753416 None:intergenic
TAGTAGTATGATGAAGGCAT+GGG 0.520768 1.2:-33756383 MS.gene040673:CDS
TAAAGATAGTAGTATGATGA+AGG 0.524810 1.2:-33756389 MS.gene040673:CDS
AAACGCCTCGAGTATTGTCT+TGG 0.525011 1.2:+33753392 None:intergenic
AGATTACTATACAGGAGAAT+GGG 0.526143 1.2:-33756212 MS.gene040673:CDS
ATCAAGATCTTTAAGGATGG+TGG 0.526847 1.2:+33754222 None:intergenic
CGAGTATTGTCTTGGATCAA+CGG 0.529705 1.2:+33753400 None:intergenic
CATAGACGCTTTGATTTGAA+GGG 0.529755 1.2:-33754295 MS.gene040673:CDS
TTCAAGAGTGGTTATATGGA+TGG 0.530449 1.2:-33756055 MS.gene040673:CDS
GATGCAGGGAGGGCAAGTGT+AGG 0.531839 1.2:-33755479 MS.gene040673:CDS
ATAGTAGTATGATGAAGGCA+TGG 0.535192 1.2:-33756384 MS.gene040673:CDS
TGGGGCGGCGGGGAAGGTGA+TGG 0.539051 1.2:-33755425 MS.gene040673:CDS
GATTACATGTTATCCATATG+TGG 0.540637 1.2:-33754819 MS.gene040673:CDS
GTGAGTATCAAGTTAGTCCT+GGG 0.541149 1.2:-33755598 MS.gene040673:CDS
TATGTTGGAGAATGGTTCAA+AGG 0.542524 1.2:-33756136 MS.gene040673:CDS
AGAACTATTATATTGGGGAA+TGG 0.542557 1.2:-33755868 MS.gene040673:CDS
AGAGGTTTGCAGGATGGACA+AGG 0.542957 1.2:-33755911 MS.gene040673:CDS
ATGGACTATAGTCTACTAGT+TGG 0.542989 1.2:-33753971 MS.gene040673:CDS
TCTTTGGAATCAAAAGCTGA+AGG 0.544617 1.2:+33755065 None:intergenic
GCATATAACAGGCATTCTGT+TGG 0.544984 1.2:-33755122 MS.gene040673:intron
TTGAACTCACTGGACGGATG+TGG 0.545333 1.2:+33754996 None:intergenic
GGATACTTATAAGGGACAAT+GGG 0.546935 1.2:-33756005 MS.gene040673:CDS
GATGAAGGCATGGGAGGCCA+CGG 0.548146 1.2:-33756374 MS.gene040673:CDS
TGGAGAAGAGGTTTGCAGGA+TGG 0.548418 1.2:-33755917 MS.gene040673:CDS
AGTAATGGGAATAGGTATGA+TGG 0.548558 1.2:-33755806 MS.gene040673:CDS
ATGTAAAATAACAAAATGAT+GGG 0.549385 1.2:-33756412 None:intergenic
TGGGAAAGGGAAGGTTCACT+TGG 0.554254 1.2:-33756105 MS.gene040673:CDS
ATGCAGGGAGGGCAAGTGTA+GGG 0.554397 1.2:-33755478 MS.gene040673:CDS
CAGCTCGTAGGAGAACCAAT+TGG 0.554667 1.2:-33753542 MS.gene040673:CDS
GGAACTTTCAAATGGGGTGA+TGG 0.556817 1.2:-33755752 MS.gene040673:CDS
ATTTGAAGGGTTCTTCACTT+GGG 0.558907 1.2:-33754282 MS.gene040673:CDS
GTTGGAGTTCTACTACCAGT+TGG 0.560041 1.2:+33755374 None:intergenic
GATGTATATATGTTGGAGAA+TGG 0.560679 1.2:-33756144 MS.gene040673:CDS
ATATGCCAGCACGGGTTGAA+AGG 0.562062 1.2:-33753592 MS.gene040673:CDS
CCAAAGAAATCAAAGAGGCA+GGG 0.564458 1.2:-33755281 MS.gene040673:CDS
ACAGATGGATGTATATATGT+TGG 0.565013 1.2:-33756151 MS.gene040673:CDS
TGGAGGAATGGGAGTATTTG+GGG 0.565397 1.2:-33755848 MS.gene040673:CDS
AATGTCAGTGGATGCAGGGA+GGG 0.565624 1.2:-33755489 MS.gene040673:CDS
AACTCAGTATACACTTGTTG+TGG 0.565787 1.2:+33755623 None:intergenic
GATGGTTTGCCTAAAGGGAA+TGG 0.567377 1.2:-33755773 MS.gene040673:CDS
CGGGTCATCGCAATCGCAAG+AGG 0.568227 1.2:-33755663 MS.gene040673:CDS
GATTGCGATGACCCGGGAGA+AGG 0.568916 1.2:+33755671 None:intergenic
GGGAAGTACTTATGGACAGA+TGG 0.569579 1.2:-33756166 MS.gene040673:CDS
TAGATCAAGATCTTTAAGGA+TGG 0.570495 1.2:+33754219 None:intergenic
AGAATGCATTTATGGGGCGG+CGG 0.572872 1.2:-33755437 MS.gene040673:CDS
CTTCAGGGCCAGCTTATGAA+GGG 0.574351 1.2:-33756081 MS.gene040673:CDS
AAAACTGAAACCTTCTCCCC+AGG 0.574665 1.2:+33755581 None:intergenic
CTGTGAGCTTCTGGAACAGG+AGG 0.574774 1.2:-33753999 MS.gene040673:CDS
CTGGCGAAGAAAGTTCGCGC+AGG 0.581257 1.2:+33754787 None:intergenic
ACTATTATATTGGGGAATGG+AGG 0.581377 1.2:-33755865 MS.gene040673:CDS
AGATCATGAAGAAGAAAGCA+AGG 0.581465 1.2:-33756275 MS.gene040673:CDS
TTCCATTTGAACTCACTGGA+CGG 0.581661 1.2:+33754990 None:intergenic
ACTGCAAGTCTCTTCTGTGA+TGG 0.584436 1.2:+33755557 None:intergenic
CGAAAGACATGTGACCTGGA+AGG 0.585910 1.2:+33753710 None:intergenic
GAAGAATGTCAGTGGATGCA+GGG 0.586181 1.2:-33755493 MS.gene040673:CDS
GGGAGTGAATATGCCAGCAC+GGG 0.590690 1.2:-33753600 MS.gene040673:CDS
GTTGGAGTTCTATTACCAGT+TGG 0.592917 1.2:+33755392 None:intergenic
CTTCAGATCTAAAGATGCTG+AGG 0.593430 1.2:+33755088 None:intergenic
GGGATACTTATAAGGGACAA+TGG 0.593729 1.2:-33756006 MS.gene040673:CDS
TTAGGTGATTCAGAGGGTGA+AGG 0.596229 1.2:-33753779 MS.gene040673:intron
TGCAGTGTGGAGGTCTACCA+AGG 0.596941 1.2:-33755540 MS.gene040673:CDS
GTCCAGTGAGTTCAAATGGA+AGG 0.597571 1.2:-33754988 MS.gene040673:CDS
AGATGAGAACTATTATATTG+GGG 0.598798 1.2:-33755873 MS.gene040673:CDS
GAGGTTTGCAGGATGGACAA+GGG 0.599089 1.2:-33755910 MS.gene040673:CDS
AACTCACTGGACGGATGTGG+AGG 0.600098 1.2:+33754999 None:intergenic
ACCAATTGGAGAGTACTATG+AGG 0.601964 1.2:-33753528 MS.gene040673:CDS
AAGAAGTATACCATGCAGAG+AGG 0.602501 1.2:-33756249 MS.gene040673:CDS
GCAGTGTGGAGGTCTACCAA+GGG 0.603480 1.2:-33755539 MS.gene040673:CDS
CAGATCTAAAGATGCTGAGG+GGG 0.604773 1.2:+33755091 None:intergenic
TCCAATGGAGATAAGTATGA+GGG 0.604842 1.2:-33755944 MS.gene040673:CDS
ATGAATTTGAAACATGGTCA+TGG 0.607160 1.2:-33755980 MS.gene040673:CDS
TGGGAGTGAATATGCCAGCA+CGG 0.608917 1.2:-33753601 MS.gene040673:CDS
TTCAAAGATATATCACCAGA+AGG 0.612199 1.2:-33753941 MS.gene040673:CDS
AATGCATTTATGGGGCGGCG+GGG 0.616007 1.2:-33755435 MS.gene040673:CDS
TTCAGATCTAAAGATGCTGA+GGG 0.616720 1.2:+33755089 None:intergenic
GAACATATTATCCTTCTCCC+GGG 0.616837 1.2:-33755682 MS.gene040673:CDS
ACATATGTAGCTTCACAACA+TGG 0.618739 1.2:-33756298 MS.gene040673:CDS
TGGCGAAGAAAGTTCGCGCA+GGG 0.619391 1.2:+33754788 None:intergenic
TAGGTAGAACCCTCTCTGCA+TGG 0.622199 1.2:+33756239 None:intergenic
TAGTATGATGAAGGCATGGG+AGG 0.625060 1.2:-33756380 MS.gene040673:CDS
TGGACTAGATTTCCTCCCGA+AGG 0.625505 1.2:-33755035 MS.gene040673:CDS
GGGAATGGAACTTTCAAATG+GGG 0.627882 1.2:-33755758 MS.gene040673:CDS
AGAAGTATACCATGCAGAGA+GGG 0.629096 1.2:-33756248 MS.gene040673:CDS
AGAAGAGACTTGCAGTGTGG+AGG 0.631008 1.2:-33755550 MS.gene040673:CDS
GGGTTGATAACTTCCCGCAC+GGG 0.633125 1.2:-33756192 MS.gene040673:CDS
TGGGTTGATAACTTCCCGCA+CGG 0.634421 1.2:-33756193 MS.gene040673:CDS
TGATCTCAGGCAAATCGACA+GGG 0.634606 1.2:-33754023 MS.gene040673:intron
ATGGACAAGGGAGATATGAG+TGG 0.639995 1.2:-33755898 MS.gene040673:CDS
TCTTGCGATTGCGATGACCC+GGG 0.643446 1.2:+33755665 None:intergenic
TATGAAGGGGAGTTCAAGAG+TGG 0.648354 1.2:-33756067 MS.gene040673:CDS
TTCAGGGCCAGCTTATGAAG+GGG 0.648838 1.2:-33756080 MS.gene040673:CDS
GTATATTTGGATCCTTCGGG+AGG 0.651164 1.2:+33755023 None:intergenic
GATAGAATGCATTTATGGGG+CGG 0.654237 1.2:-33755440 MS.gene040673:CDS
TCAAATTTAGGTGATTCAGA+GGG 0.654588 1.2:-33753785 MS.gene040673:intron
TGCATACACTGCTACTAATG+GGG 0.655254 1.2:-33756026 MS.gene040673:CDS
CAGGGAGAGACCATATGCAA+AGG 0.660979 1.2:-33755263 MS.gene040673:CDS
AGTGATAGAATGCATTTATG+GGG 0.661374 1.2:-33755443 MS.gene040673:CDS
GGGTCATCGCAATCGCAAGA+GGG 0.662210 1.2:-33755662 MS.gene040673:CDS
AAGTACTTCCCTTTCCCGTG+CGG 0.662542 1.2:+33756178 None:intergenic
TAAGACAATGAAGAAAGCTG+AGG 0.665400 1.2:-33754715 MS.gene040673:CDS
GATTGTGAATTACAGCTCGT+AGG 0.668879 1.2:-33753554 MS.gene040673:CDS
GGTGAGACGAGTTATTCCAA+TGG 0.668902 1.2:-33755959 MS.gene040673:CDS
CACAGAAGAGACTTGCAGTG+TGG 0.670218 1.2:-33755553 MS.gene040673:CDS
AGTGGAGTATGAGATCCTGA+AGG 0.680944 1.2:+33753908 None:intergenic
TTGATCCAAGACAATACTCG+AGG 0.685927 1.2:-33753397 MS.gene040673:CDS
TGGGTAATGAATTTGAAACA+TGG 0.687560 1.2:-33755986 MS.gene040673:CDS
GAATGTCAGTGGATGCAGGG+AGG 0.688706 1.2:-33755490 MS.gene040673:CDS
TCTTAGGAAGCTATTCAAGG+TGG 0.689065 1.2:-33754850 MS.gene040673:CDS
TGTGAGCTTCTGGAACAGGA+GGG 0.689457 1.2:-33753998 MS.gene040673:CDS
GGCCACGGTGAAGAAGACAC+AGG 0.692992 1.2:-33756359 MS.gene040673:CDS
AAGGATCCAAGAGATCAGAG+TGG 0.693035 1.2:-33755704 MS.gene040673:CDS
AAGCACCAAAGAAATCAAAG+AGG 0.693395 1.2:-33755286 MS.gene040673:CDS
CAGTGTGGAGGTCTACCAAG+GGG 0.694503 1.2:-33755538 MS.gene040673:CDS
ATGTCTTCTCGTGAAATACG+GGG 0.697359 1.2:+33753752 None:intergenic
TGAGTATCAAGTTAGTCCTG+GGG 0.698062 1.2:-33755597 MS.gene040673:CDS
TCAGATCTAAAGATGCTGAG+GGG 0.726498 1.2:+33755090 None:intergenic
TAAGCCGAGAAGAATGTCAG+TGG 0.727725 1.2:-33755501 MS.gene040673:CDS
AGTGTGGAGGTCTACCAAGG+GGG 0.727979 1.2:-33755537 MS.gene040673:CDS
TGCCTGTGTCTTCTTCACCG+TGG 0.733834 1.2:+33756357 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATTATAATATGCAAAA+GGG + chr1.2:33754843-33754862 None:intergenic 15.0%
!! TTATAAAATTTATGGATTTC+AGG - chr1.2:33755384-33755403 MS.gene040673:CDS 15.0%
!!! TTATTAGCATAATATTGATT+TGG - chr1.2:33755106-33755125 MS.gene040673:CDS 15.0%
!! AAAGATGAGAACTATTATAT+TGG - chr1.2:33753874-33753893 MS.gene040673:intron 20.0%
!! AAGATGAGAACTATTATATT+GGG - chr1.2:33753875-33753894 MS.gene040673:intron 20.0%
!! AATTTAGATCAAGATCTTTA+AGG + chr1.2:33755537-33755556 None:intergenic 20.0%
!! ATTGTATATTTGTTTGTAGA+TGG - chr1.2:33756112-33756131 MS.gene040673:CDS 20.0%
!! GATCAATTATAATATGCAAA+AGG + chr1.2:33754844-33754863 None:intergenic 20.0%
!! TCATTGTCTTAATCATATAA+CGG + chr1.2:33755025-33755044 None:intergenic 20.0%
!! TTGTATATTTGTTTGTAGAT+GGG - chr1.2:33756113-33756132 MS.gene040673:CDS 20.0%
!!! AAATTCCTAGAAAAACATTT+TGG - chr1.2:33755937-33755956 MS.gene040673:CDS 20.0%
! AAAAATCGTCTACAACATTT+AGG + chr1.2:33755276-33755295 None:intergenic 25.0%
! AAGTGATAGAATGCATTTAT+GGG - chr1.2:33754305-33754324 MS.gene040673:CDS 25.0%
! AGATGAGAACTATTATATTG+GGG - chr1.2:33753876-33753895 MS.gene040673:intron 25.0%
! ATAAGAAAAATACCATCAAG+TGG + chr1.2:33755862-33755881 None:intergenic 25.0%
! ATTAACTACCTAAAAACTAC+TGG + chr1.2:33754795-33754814 None:intergenic 25.0%
! TAAAGATAGTAGTATGATGA+AGG - chr1.2:33753360-33753379 MS.gene040673:CDS 25.0%
! TATATAACAAACACATGACA+TGG + chr1.2:33755706-33755725 None:intergenic 25.0%
! TCAATTTACAATTAGGAATC+AGG - chr1.2:33754532-33754551 MS.gene040673:CDS 25.0%
! TCGAAAATGATTGTAATAAG+CGG + chr1.2:33755173-33755192 None:intergenic 25.0%
! TTAACTACCTAAAAACTACT+GGG + chr1.2:33754794-33754813 None:intergenic 25.0%
! TTACATTGTGTCAAGTTAAA+TGG - chr1.2:33755229-33755248 MS.gene040673:CDS 25.0%
! TTACTAGTATCTATCCTTAT+AGG - chr1.2:33755319-33755338 MS.gene040673:CDS 25.0%
!! AACATCCAAAATGTTTTTCT+AGG + chr1.2:33755945-33755964 None:intergenic 25.0%
!! CATTTTGGATGTTCAAATTT+AGG - chr1.2:33755952-33755971 MS.gene040673:CDS 25.0%
!! GAAGTTTTTATGTAGGTAAT+TGG - chr1.2:33754019-33754038 MS.gene040673:intron 25.0%
!!! GTTTTTCTAGGAATTTAATG+AGG + chr1.2:33755933-33755952 None:intergenic 25.0%
!!! TGTTTGTTATATATGATCTC+AGG - chr1.2:33755713-33755732 MS.gene040673:CDS 25.0%
AAAGGAAAAACTATGGGAAA+GGG - chr1.2:33753631-33753650 MS.gene040673:intron 30.0%
AACTCATGATCATCTTTAGT+TGG + chr1.2:33754396-33754415 None:intergenic 30.0%
AATCATATAACGGTCATCAT+TGG + chr1.2:33755015-33755034 None:intergenic 30.0%
ACAGATGGATGTATATATGT+TGG - chr1.2:33753598-33753617 MS.gene040673:CDS 30.0%
ACTAATGGGGATACTTATAA+GGG - chr1.2:33753736-33753755 MS.gene040673:CDS 30.0%
AGAACTATTATATTGGGGAA+TGG - chr1.2:33753881-33753900 MS.gene040673:intron 30.0%
AGATTACTATACAGGAGAAT+GGG - chr1.2:33753537-33753556 MS.gene040673:CDS 30.0%
AGTGATAGAATGCATTTATG+GGG - chr1.2:33754306-33754325 MS.gene040673:CDS 30.0%
ATGGTTCAAAGGAAAAACTA+TGG - chr1.2:33753624-33753643 MS.gene040673:intron 30.0%
ATGTTATATGATAGCTAGCT+AGG + chr1.2:33755643-33755662 None:intergenic 30.0%
CAAGTGATAGAATGCATTTA+TGG - chr1.2:33754304-33754323 MS.gene040673:CDS 30.0%
CAGGTACGATTTATCATAAT+GGG - chr1.2:33755403-33755422 MS.gene040673:CDS 30.0%
CATAAATGCATTCTATCACT+TGG + chr1.2:33754306-33754325 None:intergenic 30.0%
CGAAAATGATTGTAATAAGC+GGG + chr1.2:33755172-33755191 None:intergenic 30.0%
CTCATGCTCAATTTACAATT+AGG - chr1.2:33754525-33754544 MS.gene040673:CDS 30.0%
GAAATGTATGCTTTCCTATA+AGG + chr1.2:33755336-33755355 None:intergenic 30.0%
GATGTATATATGTTGGAGAA+TGG - chr1.2:33753605-33753624 MS.gene040673:CDS 30.0%
GATTACATGTTATCCATATG+TGG - chr1.2:33754930-33754949 MS.gene040673:intron 30.0%
TAATTCTCTTATCGAAACCA+AGG - chr1.2:33755075-33755094 MS.gene040673:CDS 30.0%
TACTAATGGGGATACTTATA+AGG - chr1.2:33753735-33753754 MS.gene040673:CDS 30.0%
TATGAGTTGTTGCATATAAC+AGG - chr1.2:33754616-33754635 MS.gene040673:intron 30.0%
TCAAATTTAGGTGATTCAGA+GGG - chr1.2:33755964-33755983 MS.gene040673:CDS 30.0%
TCAGGTACGATTTATCATAA+TGG - chr1.2:33755402-33755421 MS.gene040673:CDS 30.0%
TGGTATACTCAGAACAAAAA+AGG + chr1.2:33755432-33755451 None:intergenic 30.0%
TGGTTCAAAGGAAAAACTAT+GGG - chr1.2:33753625-33753644 MS.gene040673:intron 30.0%
TTATGTAGGTAATTGGAGTA+AGG - chr1.2:33754026-33754045 MS.gene040673:intron 30.0%
TTCAAAGATATATCACCAGA+AGG - chr1.2:33755808-33755827 MS.gene040673:CDS 30.0%
TTCAAATTTAGGTGATTCAG+AGG - chr1.2:33755963-33755982 MS.gene040673:CDS 30.0%
TTGATTCCAAAGAGAAAGTA+TGG - chr1.2:33754694-33754713 MS.gene040673:intron 30.0%
! ATCGTATTGAATGGACTTAT+AGG + chr1.2:33756313-33756332 None:intergenic 30.0%
! ATGAATTTGAAACATGGTCA+TGG - chr1.2:33753769-33753788 MS.gene040673:CDS 30.0%
! GTTCATTTGTTTGGAGTAAT+GGG - chr1.2:33753929-33753948 MS.gene040673:CDS 30.0%
! TAGATCAAGATCTTTAAGGA+TGG + chr1.2:33755533-33755552 None:intergenic 30.0%
! TGGGTAATGAATTTGAAACA+TGG - chr1.2:33753763-33753782 MS.gene040673:CDS 30.0%
!! ATTGCTTATTCTTTTCGAGA+AGG + chr1.2:33755679-33755698 None:intergenic 30.0%
!!! ACATGCTGATTTTATTTTGC+AGG - chr1.2:33755129-33755148 MS.gene040673:intron 30.0%
!!! TATGAGGTTGTCTTGTTTTT+TGG - chr1.2:33756237-33756256 MS.gene040673:CDS 30.0%
AAAATTCCCTCAGAACTCTT+AGG - chr1.2:33754883-33754902 MS.gene040673:intron 35.0%
AAAGATGATCATGAGTTGCT+TGG - chr1.2:33754399-33754418 MS.gene040673:intron 35.0%
AAATGGACCTTCTCAGAAAA+AGG - chr1.2:33755246-33755265 MS.gene040673:CDS 35.0%
AACTCTTAGGAAGCTATTCA+AGG - chr1.2:33754896-33754915 MS.gene040673:intron 35.0%
AAGCACCAAAGAAATCAAAG+AGG - chr1.2:33754463-33754482 MS.gene040673:intron 35.0%
AAGCGTGCAAATAGCATATT+TGG - chr1.2:33753424-33753443 MS.gene040673:CDS 35.0%
AAGGGAATGGAACTTTCAAA+TGG - chr1.2:33753989-33754008 MS.gene040673:CDS 35.0%
ACATATGTAGCTTCACAACA+TGG - chr1.2:33753451-33753470 MS.gene040673:CDS 35.0%
ACTATTATATTGGGGAATGG+AGG - chr1.2:33753884-33753903 MS.gene040673:intron 35.0%
AGATCATGAAGAAGAAAGCA+AGG - chr1.2:33753474-33753493 MS.gene040673:CDS 35.0%
AGATGGGCAAGTATCAAATT+GGG - chr1.2:33756129-33756148 MS.gene040673:CDS 35.0%
AGGGAATGGAACTTTCAAAT+GGG - chr1.2:33753990-33754009 MS.gene040673:CDS 35.0%
AGTGGTTATATGGATGGAAT+AGG - chr1.2:33753700-33753719 MS.gene040673:intron 35.0%
ATAGTAGTATGATGAAGGCA+TGG - chr1.2:33753365-33753384 MS.gene040673:CDS 35.0%
ATTCTTGTGTCCTTTGCATA+TGG + chr1.2:33754499-33754518 None:intergenic 35.0%
ATTTGAAGGGTTCTTCACTT+GGG - chr1.2:33755467-33755486 MS.gene040673:CDS 35.0%
CAAAGGAAAAACTATGGGAA+AGG - chr1.2:33753630-33753649 MS.gene040673:intron 35.0%
CCTAATGGAGATTACTATAC+AGG - chr1.2:33753529-33753548 MS.gene040673:CDS 35.0%
CCTGTATAGTAATCTCCATT+AGG + chr1.2:33753532-33753551 None:intergenic 35.0%
GAATAGGTATGATGGCTATT+GGG - chr1.2:33753951-33753970 MS.gene040673:CDS 35.0%
GAGATTACTATACAGGAGAA+TGG - chr1.2:33753536-33753555 MS.gene040673:CDS 35.0%
GGATACTTATAAGGGACAAT+GGG - chr1.2:33753744-33753763 MS.gene040673:CDS 35.0%
TAAGACAATGAAGAAAGCTG+AGG - chr1.2:33755034-33755053 MS.gene040673:CDS 35.0%
TAGATGGGCAAGTATCAAAT+TGG - chr1.2:33756128-33756147 MS.gene040673:CDS 35.0%
TATGTTGGAGAATGGTTCAA+AGG - chr1.2:33753613-33753632 MS.gene040673:CDS 35.0%
TATTTCGACTACAACGATCT+TGG - chr1.2:33755560-33755579 MS.gene040673:CDS 35.0%
TCCAATGGAGATAAGTATGA+GGG - chr1.2:33753805-33753824 MS.gene040673:intron 35.0%
TCTAGTCCATACTTTCTCTT+TGG + chr1.2:33754703-33754722 None:intergenic 35.0%
TTCAAGAGTGGTTATATGGA+TGG - chr1.2:33753694-33753713 MS.gene040673:intron 35.0%
TTCAGATCTAAAGATGCTGA+GGG + chr1.2:33754663-33754682 None:intergenic 35.0%
TTCCAATGGAGATAAGTATG+AGG - chr1.2:33753804-33753823 MS.gene040673:intron 35.0%
TTGAAAGTTCCATTCCCTTT+AGG + chr1.2:33753988-33754007 None:intergenic 35.0%
! AACTCAGTATACACTTGTTG+TGG + chr1.2:33754129-33754148 None:intergenic 35.0%
! ACTATTGCCCAGTAGTTTTT+AGG - chr1.2:33754784-33754803 MS.gene040673:CDS 35.0%
! AGTAATGGGAATAGGTATGA+TGG - chr1.2:33753943-33753962 MS.gene040673:CDS 35.0%
! ATCAAGATCTTTAAGGATGG+TGG + chr1.2:33755530-33755549 None:intergenic 35.0%
! ATGGACTATAGTCTACTAGT+TGG - chr1.2:33755778-33755797 MS.gene040673:CDS 35.0%
! CAAATCAAAGCGTCTATGTA+TGG + chr1.2:33755452-33755471 None:intergenic 35.0%
! GCTCTAGTGACAAAGTTTTA+TGG - chr1.2:33755205-33755224 MS.gene040673:intron 35.0%
! GGTTCATTTGTTTGGAGTAA+TGG - chr1.2:33753928-33753947 MS.gene040673:CDS 35.0%
! TAGTAGTATGATGAAGGCAT+GGG - chr1.2:33753366-33753385 MS.gene040673:CDS 35.0%
! TTGTTTGGAGTAATGGGAAT+AGG - chr1.2:33753935-33753954 MS.gene040673:CDS 35.0%
!! ACATAGACGCTTTGATTTGA+AGG - chr1.2:33755453-33755472 MS.gene040673:CDS 35.0%
!! CATAGACGCTTTGATTTGAA+GGG - chr1.2:33755454-33755473 MS.gene040673:CDS 35.0%
!! TCTTTGGAATCAAAAGCTGA+AGG + chr1.2:33754687-33754706 None:intergenic 35.0%
!!! CTTGGTTTCTAGAATTTTGC+AGG - chr1.2:33755578-33755597 MS.gene040673:CDS 35.0%
!!! GGTGATGGAAGTTTTTATGT+AGG - chr1.2:33754012-33754031 MS.gene040673:CDS 35.0%
!!! GTTCTGAGGGAATTTTTAAG+AGG + chr1.2:33754879-33754898 None:intergenic 35.0%
ACCAAAGAAATCAAAGAGGC+AGG - chr1.2:33754467-33754486 MS.gene040673:intron 40.0%
ACCTCATAGTACTCTCCAAT+TGG + chr1.2:33756225-33756244 None:intergenic 40.0%
ACTGGTAATAGAACTCCAAC+TGG - chr1.2:33754360-33754379 MS.gene040673:intron 40.0%
AGGCGTATATTTGGATCCTT+CGG + chr1.2:33754733-33754752 None:intergenic 40.0%
AGTGAGTATCAAGTTAGTCC+TGG - chr1.2:33754150-33754169 MS.gene040673:intron 40.0%
ATAGCTTCCTAAGAGTTCTG+AGG + chr1.2:33754893-33754912 None:intergenic 40.0%
ATATTGGGGAATGGAGGAAT+GGG - chr1.2:33753890-33753909 MS.gene040673:intron 40.0%
ATGTCTTCTCGTGAAATACG+GGG + chr1.2:33756000-33756019 None:intergenic 40.0%
CATGTCTTCTCGTGAAATAC+GGG + chr1.2:33756001-33756020 None:intergenic 40.0%
CCAAAGAAATCAAAGAGGCA+GGG - chr1.2:33754468-33754487 MS.gene040673:intron 40.0%
CCATGTCTTCTCGTGAAATA+CGG + chr1.2:33756002-33756021 None:intergenic 40.0%
CTTCAGATCTAAAGATGCTG+AGG + chr1.2:33754664-33754683 None:intergenic 40.0%
GAAAAACTATGGGAAAGGGA+AGG - chr1.2:33753635-33753654 MS.gene040673:intron 40.0%
GAACATATTATCCTTCTCCC+GGG - chr1.2:33754067-33754086 MS.gene040673:intron 40.0%
GAAGGAATAAGATCTCCTTC+TGG + chr1.2:33755826-33755845 None:intergenic 40.0%
GAAGGAGATCTTATTCCTTC+AGG - chr1.2:33755826-33755845 MS.gene040673:CDS 40.0%
GAGATAAGTATGAGGGAGAA+TGG - chr1.2:33753812-33753831 MS.gene040673:intron 40.0%
GATAGAATGCATTTATGGGG+CGG - chr1.2:33754309-33754328 MS.gene040673:CDS 40.0%
GATGGTAATAGAACTCCAAC+TGG - chr1.2:33754342-33754361 MS.gene040673:CDS 40.0%
GATTGTGAATTACAGCTCGT+AGG - chr1.2:33756195-33756214 MS.gene040673:CDS 40.0%
GATTTGAAGGGTTCTTCACT+TGG - chr1.2:33755466-33755485 MS.gene040673:CDS 40.0%
GCATATAACAGGCATTCTGT+TGG - chr1.2:33754627-33754646 MS.gene040673:intron 40.0%
GGAACATATTATCCTTCTCC+CGG - chr1.2:33754066-33754085 MS.gene040673:intron 40.0%
GGAATAGGTATGATGGCTAT+TGG - chr1.2:33753950-33753969 MS.gene040673:CDS 40.0%
GGAGTTCAAGAGTGGTTATA+TGG - chr1.2:33753690-33753709 MS.gene040673:intron 40.0%
GGGAATGGAACTTTCAAATG+GGG - chr1.2:33753991-33754010 MS.gene040673:CDS 40.0%
GGGATACTTATAAGGGACAA+TGG - chr1.2:33753743-33753762 MS.gene040673:CDS 40.0%
GGGGTAAAGGTTCATTTGTT+TGG - chr1.2:33753920-33753939 MS.gene040673:CDS 40.0%
GGTGCTTTCAAAGTTTGTCT+TGG + chr1.2:33754450-33754469 None:intergenic 40.0%
GTGAGTATCAAGTTAGTCCT+GGG - chr1.2:33754151-33754170 MS.gene040673:intron 40.0%
GTGCATACACTGCTACTAAT+GGG - chr1.2:33753722-33753741 MS.gene040673:intron 40.0%
GTTGGAGTTCTATTACCAGT+TGG + chr1.2:33754360-33754379 None:intergenic 40.0%
GTTTCAGTAATCTCTGACTC+AGG + chr1.2:33755508-33755527 None:intergenic 40.0%
TATATTGGGGAATGGAGGAA+TGG - chr1.2:33753889-33753908 MS.gene040673:intron 40.0%
TATGATGGCTATTGGGAAGA+TGG - chr1.2:33753958-33753977 MS.gene040673:CDS 40.0%
TATGTTCCACTCTGATCTCT+TGG + chr1.2:33754054-33754073 None:intergenic 40.0%
TCAGATCTAAAGATGCTGAG+GGG + chr1.2:33754662-33754681 None:intergenic 40.0%
TCCCTCATACTTATCTCCAT+TGG + chr1.2:33753809-33753828 None:intergenic 40.0%
TCTTAGGAAGCTATTCAAGG+TGG - chr1.2:33754899-33754918 MS.gene040673:intron 40.0%
TGAGGTTGGATCGTATTGAA+TGG + chr1.2:33756322-33756341 None:intergenic 40.0%
TGAGTATCAAGTTAGTCCTG+GGG - chr1.2:33754152-33754171 MS.gene040673:intron 40.0%
TGCATACACTGCTACTAATG+GGG - chr1.2:33753723-33753742 MS.gene040673:intron 40.0%
TGCTAATAATGTGTGTGCCT+TGG + chr1.2:33755095-33755114 None:intergenic 40.0%
TTCCATTTGAACTCACTGGA+CGG + chr1.2:33754762-33754781 None:intergenic 40.0%
TTGATCCAAGACAATACTCG+AGG - chr1.2:33756352-33756371 MS.gene040673:CDS 40.0%
! AAGAAGTATACCATGCAGAG+AGG - chr1.2:33753500-33753519 MS.gene040673:CDS 40.0%
! AGAAGTATACCATGCAGAGA+GGG - chr1.2:33753501-33753520 MS.gene040673:CDS 40.0%
! CGAGTATTGTCTTGGATCAA+CGG + chr1.2:33756352-33756371 None:intergenic 40.0%
! TAGCTTCCTAAGAGTTCTGA+GGG + chr1.2:33754892-33754911 None:intergenic 40.0%
! TTTTCGAAAGACATGTGACC+TGG + chr1.2:33756046-33756065 None:intergenic 40.0%
!! AATGGAGGAATGGGAGTATT+TGG - chr1.2:33753899-33753918 MS.gene040673:intron 40.0%
!! AATGGGAGTATTTGGGGTAA+AGG - chr1.2:33753907-33753926 MS.gene040673:CDS 40.0%
!! ACCAATTGGAGAGTACTATG+AGG - chr1.2:33756221-33756240 MS.gene040673:CDS 40.0%
!! AGGTACACCTTTTTCTGAGA+AGG + chr1.2:33755256-33755275 None:intergenic 40.0%
!! ATGGAGGAATGGGAGTATTT+GGG - chr1.2:33753900-33753919 MS.gene040673:intron 40.0%
!!! AAGAAGCTTCCACTTTTTCC+TGG + chr1.2:33754984-33755003 None:intergenic 40.0%
AAAACTGAAACCTTCTCCCC+AGG + chr1.2:33754171-33754190 None:intergenic 45.0%
AACTTCTGCTAGATCCTTCC+AGG - chr1.2:33756025-33756044 MS.gene040673:CDS 45.0%
AAGGATCCAAGAGATCAGAG+TGG - chr1.2:33754045-33754064 MS.gene040673:intron 45.0%
ACTGCAAGTCTCTTCTGTGA+TGG + chr1.2:33754195-33754214 None:intergenic 45.0%
AGAAGAATGTCAGTGGATGC+AGG - chr1.2:33754255-33754274 MS.gene040673:CDS 45.0%
AGAATGGAGAAGAGGTTTGC+AGG - chr1.2:33753828-33753847 MS.gene040673:intron 45.0%
AGTGGAGTATGAGATCCTGA+AGG + chr1.2:33755844-33755863 None:intergenic 45.0%
ATCCGTCCAGTGAGTTCAAA+TGG - chr1.2:33754757-33754776 MS.gene040673:CDS 45.0%
ATGATCTCAGGCAAATCGAC+AGG - chr1.2:33755725-33755744 MS.gene040673:CDS 45.0%
ATGGACAAGGGAGATATGAG+TGG - chr1.2:33753851-33753870 MS.gene040673:intron 45.0%
CAGATCTAAAGATGCTGAGG+GGG + chr1.2:33754661-33754680 None:intergenic 45.0%
CCGTATTTCACGAGAAGACA+TGG - chr1.2:33755999-33756018 MS.gene040673:CDS 45.0%
CTTTCTTCGCCAGGAAAAAG+TGG - chr1.2:33754972-33754991 MS.gene040673:CDS 45.0%
GAAGAATGTCAGTGGATGCA+GGG - chr1.2:33754256-33754275 MS.gene040673:CDS 45.0%
GCAAGAGGGTCATCTTGATT+GGG - chr1.2:33754101-33754120 MS.gene040673:intron 45.0%
GCATCCACTGACATTCTTCT+CGG + chr1.2:33754255-33754274 None:intergenic 45.0%
GGAACTTTCAAATGGGGTGA+TGG - chr1.2:33753997-33754016 MS.gene040673:CDS 45.0%
GGATCTCATACTCCACTTGA+TGG - chr1.2:33755847-33755866 MS.gene040673:CDS 45.0%
GGCGTATATTTGGATCCTTC+GGG + chr1.2:33754732-33754751 None:intergenic 45.0%
GGTGAGACGAGTTATTCCAA+TGG - chr1.2:33753790-33753809 MS.gene040673:intron 45.0%
GGTGCATACACTGCTACTAA+TGG - chr1.2:33753721-33753740 MS.gene040673:intron 45.0%
GTATATTTGGATCCTTCGGG+AGG + chr1.2:33754729-33754748 None:intergenic 45.0%
GTCCAGTGAGTTCAAATGGA+AGG - chr1.2:33754761-33754780 MS.gene040673:CDS 45.0%
GTCCTTCCATTTGAACTCAC+TGG + chr1.2:33754766-33754785 None:intergenic 45.0%
GTTGGAGTTCTACTACCAGT+TGG + chr1.2:33754378-33754397 None:intergenic 45.0%
TAAGCCGAGAAGAATGTCAG+TGG - chr1.2:33754248-33754267 MS.gene040673:CDS 45.0%
TATGAAGGGGAGTTCAAGAG+TGG - chr1.2:33753682-33753701 MS.gene040673:intron 45.0%
TATGAGGGAGAATGGAGAAG+AGG - chr1.2:33753820-33753839 MS.gene040673:intron 45.0%
TCAACGGCTGATATTGAGGT+TGG + chr1.2:33756336-33756355 None:intergenic 45.0%
TGATCTCAGGCAAATCGACA+GGG - chr1.2:33755726-33755745 MS.gene040673:CDS 45.0%
TGGATCAACGGCTGATATTG+AGG + chr1.2:33756340-33756359 None:intergenic 45.0%
TTAGGTGATTCAGAGGGTGA+AGG - chr1.2:33755970-33755989 MS.gene040673:CDS 45.0%
TTGAACTCCCCTTCATAAGC+TGG + chr1.2:33753679-33753698 None:intergenic 45.0%
! AAACGCCTCGAGTATTGTCT+TGG + chr1.2:33756360-33756379 None:intergenic 45.0%
! CAGGGCATCATTTCCACATA+TGG + chr1.2:33754946-33754965 None:intergenic 45.0%
! CCCTGCCTCTTTGATTTCTT+TGG + chr1.2:33754471-33754490 None:intergenic 45.0%
! GATGGTTTGCCTAAAGGGAA+TGG - chr1.2:33753976-33753995 MS.gene040673:CDS 45.0%
! GGGAAGATGGTTTGCCTAAA+GGG - chr1.2:33753971-33753990 MS.gene040673:CDS 45.0%
! TAGTATGATGAAGGCATGGG+AGG - chr1.2:33753369-33753388 MS.gene040673:CDS 45.0%
! TCTGGAACAGGAGGGAATTA+TGG - chr1.2:33755759-33755778 MS.gene040673:CDS 45.0%
! TGGGAAGATGGTTTGCCTAA+AGG - chr1.2:33753970-33753989 MS.gene040673:CDS 45.0%
!! ACGGGAAAGGGAAGTACTTA+TGG - chr1.2:33753575-33753594 MS.gene040673:CDS 45.0%
!! GGGAAGTACTTATGGACAGA+TGG - chr1.2:33753583-33753602 MS.gene040673:CDS 45.0%
!! TGGAGGAATGGGAGTATTTG+GGG - chr1.2:33753901-33753920 MS.gene040673:intron 45.0%
!! ATATATATTATATACTATTA+TGG + chr1.2:33755885-33755904 None:intergenic 5.0%
!! ATTCATATTTATAAAATTTA+TGG - chr1.2:33755376-33755395 MS.gene040673:CDS 5.0%
!! CTTAATAATAAAAATTAATA+AGG + chr1.2:33754818-33754837 None:intergenic 5.0%
AAGTACTTCCCTTTCCCGTG+CGG + chr1.2:33753574-33753593 None:intergenic 50.0%
AATGTCAGTGGATGCAGGGA+GGG - chr1.2:33754260-33754279 MS.gene040673:CDS 50.0%
AGAAGAGACTTGCAGTGTGG+AGG - chr1.2:33754199-33754218 MS.gene040673:CDS 50.0%
AGAATGCATTTATGGGGCGG+CGG - chr1.2:33754312-33754331 MS.gene040673:CDS 50.0%
AGAGGTTTGCAGGATGGACA+AGG - chr1.2:33753838-33753857 MS.gene040673:intron 50.0%
ATAACTTCCCGCACGGGAAA+GGG - chr1.2:33753563-33753582 MS.gene040673:CDS 50.0%
CACAGAAGAGACTTGCAGTG+TGG - chr1.2:33754196-33754215 MS.gene040673:CDS 50.0%
CAGCTCGTAGGAGAACCAAT+TGG - chr1.2:33756207-33756226 MS.gene040673:CDS 50.0%
CAGGGAGAGACCATATGCAA+AGG - chr1.2:33754486-33754505 MS.gene040673:intron 50.0%
CGAAAGACATGTGACCTGGA+AGG + chr1.2:33756042-33756061 None:intergenic 50.0%
CGCAAGAGGGTCATCTTGAT+TGG - chr1.2:33754100-33754119 MS.gene040673:intron 50.0%
CTTCAGGGCCAGCTTATGAA+GGG - chr1.2:33753668-33753687 MS.gene040673:intron 50.0%
GAGGTTTGCAGGATGGACAA+GGG - chr1.2:33753839-33753858 MS.gene040673:intron 50.0%
GCAGAGAGGGTTCTACCTAA+TGG - chr1.2:33753514-33753533 MS.gene040673:CDS 50.0%
TAGGTAGAACCCTCTCTGCA+TGG + chr1.2:33753513-33753532 None:intergenic 50.0%
TCAAGTTAGTCCTGGGGAGA+AGG - chr1.2:33754158-33754177 MS.gene040673:intron 50.0%
TGGAGAAGAGGTTTGCAGGA+TGG - chr1.2:33753832-33753851 MS.gene040673:intron 50.0%
TGGGAAAGGGAAGGTTCACT+TGG - chr1.2:33753644-33753663 MS.gene040673:intron 50.0%
TGGGAGTGAATATGCCAGCA+CGG - chr1.2:33756148-33756167 MS.gene040673:CDS 50.0%
TTCAGGGCCAGCTTATGAAG+GGG - chr1.2:33753669-33753688 MS.gene040673:intron 50.0%
TTGAACTCACTGGACGGATG+TGG + chr1.2:33754756-33754775 None:intergenic 50.0%
! ATATGCCAGCACGGGTTGAA+AGG - chr1.2:33756157-33756176 MS.gene040673:CDS 50.0%
! CGGATGTGGAGGCGTATATT+TGG + chr1.2:33754742-33754761 None:intergenic 50.0%
! GAAGGTTCACTTGGCCTTCA+GGG - chr1.2:33753653-33753672 MS.gene040673:intron 50.0%
! TGGACTAGATTTCCTCCCGA+AGG - chr1.2:33754714-33754733 MS.gene040673:CDS 50.0%
!! TGGGTTGATAACTTCCCGCA+CGG - chr1.2:33753556-33753575 MS.gene040673:CDS 50.0%
!! TGTGAGCTTCTGGAACAGGA+GGG - chr1.2:33755751-33755770 MS.gene040673:CDS 50.0%
AACTCACTGGACGGATGTGG+AGG + chr1.2:33754753-33754772 None:intergenic 55.0%
AATGCATTTATGGGGCGGCG+GGG - chr1.2:33754314-33754333 MS.gene040673:CDS 55.0%
ACTGTCCTTTCAACCCGTGC+TGG + chr1.2:33756165-33756184 None:intergenic 55.0%
AGTACTTCCCTTTCCCGTGC+GGG + chr1.2:33753573-33753592 None:intergenic 55.0%
AGTGTGGAGGTCTACCAAGG+GGG - chr1.2:33754212-33754231 MS.gene040673:CDS 55.0%
ATGCAGGGAGGGCAAGTGTA+GGG - chr1.2:33754271-33754290 MS.gene040673:CDS 55.0%
CAGTGTGGAGGTCTACCAAG+GGG - chr1.2:33754211-33754230 MS.gene040673:CDS 55.0%
CCTTCAGGGCCAGCTTATGA+AGG - chr1.2:33753667-33753686 MS.gene040673:intron 55.0%
CCTTCATAAGCTGGCCCTGA+AGG + chr1.2:33753670-33753689 None:intergenic 55.0%
CTCTTGCGATTGCGATGACC+CGG + chr1.2:33754088-33754107 None:intergenic 55.0%
GAATGCATTTATGGGGCGGC+GGG - chr1.2:33754313-33754332 MS.gene040673:CDS 55.0%
GAATGTCAGTGGATGCAGGG+AGG - chr1.2:33754259-33754278 MS.gene040673:CDS 55.0%
GATAACTTCCCGCACGGGAA+AGG - chr1.2:33753562-33753581 MS.gene040673:CDS 55.0%
GCAGTGTGGAGGTCTACCAA+GGG - chr1.2:33754210-33754229 MS.gene040673:CDS 55.0%
GGGAGTGAATATGCCAGCAC+GGG - chr1.2:33756149-33756168 MS.gene040673:CDS 55.0%
GGGTCATCGCAATCGCAAGA+GGG - chr1.2:33754087-33754106 MS.gene040673:intron 55.0%
TCTAAAGATGCTGAGGGGGC+AGG + chr1.2:33754657-33754676 None:intergenic 55.0%
TCTTGCGATTGCGATGACCC+GGG + chr1.2:33754087-33754106 None:intergenic 55.0%
TGCAGTGTGGAGGTCTACCA+AGG - chr1.2:33754209-33754228 MS.gene040673:CDS 55.0%
TGCCTGTGTCTTCTTCACCG+TGG + chr1.2:33753395-33753414 None:intergenic 55.0%
TGGCGAAGAAAGTTCGCGCA+GGG + chr1.2:33754964-33754983 None:intergenic 55.0%
! GGAAGGTTCACTTGGCCTTC+AGG - chr1.2:33753652-33753671 MS.gene040673:intron 55.0%
!! CTGTGAGCTTCTGGAACAGG+AGG - chr1.2:33755750-33755769 MS.gene040673:CDS 55.0%
!! GGACTGTGAGCTTCTGGAAC+AGG - chr1.2:33755747-33755766 MS.gene040673:CDS 55.0%
!! GGGTTGATAACTTCCCGCAC+GGG - chr1.2:33753557-33753576 MS.gene040673:CDS 55.0%
AGCACTACCACCATCCCCCT+TGG + chr1.2:33754229-33754248 None:intergenic 60.0%
AGGTCTACCAAGGGGGATGG+TGG - chr1.2:33754219-33754238 MS.gene040673:CDS 60.0%
CGACAGGGACTGTGAGCTTC+TGG - chr1.2:33755741-33755760 MS.gene040673:CDS 60.0%
CGGGTCATCGCAATCGCAAG+AGG - chr1.2:33754086-33754105 MS.gene040673:intron 60.0%
CTGCGCGAACTTTCTTCGCC+AGG - chr1.2:33754963-33754982 MS.gene040673:intron 60.0%
CTGGCGAAGAAAGTTCGCGC+AGG + chr1.2:33754965-33754984 None:intergenic 60.0%
GATGCAGGGAGGGCAAGTGT+AGG - chr1.2:33754270-33754289 MS.gene040673:CDS 60.0%
GATTGCGATGACCCGGGAGA+AGG + chr1.2:33754081-33754100 None:intergenic 60.0%
GGCCACGGTGAAGAAGACAC+AGG - chr1.2:33753390-33753409 MS.gene040673:CDS 60.0%
TGGAGGTCTACCAAGGGGGA+TGG - chr1.2:33754216-33754235 MS.gene040673:CDS 60.0%
! GATGAAGGCATGGGAGGCCA+CGG - chr1.2:33753375-33753394 MS.gene040673:CDS 60.0%
CATTTATGGGGCGGCGGGGA+AGG - chr1.2:33754318-33754337 MS.gene040673:CDS 65.0%
TGGGGCGGCGGGGAAGGTGA+TGG - chr1.2:33754324-33754343 MS.gene040673:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 33753352 33756419 33753352 ID=MS.gene040673
chr1.2 mRNA 33753352 33756419 33753352 ID=MS.gene040673.t1;Parent=MS.gene040673
chr1.2 exon 33755218 33756419 33755218 ID=MS.gene040673.t1.exon1;Parent=MS.gene040673.t1
chr1.2 CDS 33755218 33756419 33755218 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33754966 33755133 33754966 ID=MS.gene040673.t1.exon2;Parent=MS.gene040673.t1
chr1.2 CDS 33754966 33755133 33754966 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33754710 33754875 33754710 ID=MS.gene040673.t1.exon3;Parent=MS.gene040673.t1
chr1.2 CDS 33754710 33754875 33754710 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33754504 33754620 33754504 ID=MS.gene040673.t1.exon4;Parent=MS.gene040673.t1
chr1.2 CDS 33754504 33754620 33754504 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33754172 33754365 33754172 ID=MS.gene040673.t1.exon5;Parent=MS.gene040673.t1
chr1.2 CDS 33754172 33754365 33754172 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33753903 33754036 33753903 ID=MS.gene040673.t1.exon6;Parent=MS.gene040673.t1
chr1.2 CDS 33753903 33754036 33753903 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33753725 33753797 33753725 ID=MS.gene040673.t1.exon7;Parent=MS.gene040673.t1
chr1.2 CDS 33753725 33753797 33753725 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
chr1.2 exon 33753352 33753640 33753352 ID=MS.gene040673.t1.exon8;Parent=MS.gene040673.t1
chr1.2 CDS 33753352 33753640 33753352 ID=cds.MS.gene040673.t1;Parent=MS.gene040673.t1
Gene Sequence

>MS.gene040673

ATGATGGGTAAAGATAGTAGTATGATGAAGGCATGGGAGGCCACGGTGAAGAAGACACAGGCAGTTGCGAAGAAGCGTGCAAATAGCATATTTGGATCAACATATGTAGCTTCACAACATGGAGATCATGAAGAAGAAAGCAAGGATGAAGAAGTATACCATGCAGAGAGGGTTCTACCTAATGGAGATTACTATACAGGAGAATGGGTTGATAACTTCCCGCACGGGAAAGGGAAGTACTTATGGACAGATGGATGTATATATGTTGGAGAATGGTTCAAAGGAAAAACTATGGGAAAGGGAAGGTTCACTTGGCCTTCAGGGCCAGCTTATGAAGGGGAGTTCAAGAGTGGTTATATGGATGGAATAGGTGCATACACTGCTACTAATGGGGATACTTATAAGGGACAATGGGTAATGAATTTGAAACATGGTCATGGTGAGACGAGTTATTCCAATGGAGATAAGTATGAGGGAGAATGGAGAAGAGGTTTGCAGGATGGACAAGGGAGATATGAGTGGAAAGATGAGAACTATTATATTGGGGAATGGAGGAATGGGAGTATTTGGGGTAAAGGTTCATTTGTTTGGAGTAATGGGAATAGGTATGATGGCTATTGGGAAGATGGTTTGCCTAAAGGGAATGGAACTTTCAAATGGGGTGATGGAAGTTTTTATGTAGGTAATTGGAGTAAGGATCCAAGAGATCAGAGTGGAACATATTATCCTTCTCCCGGGTCATCGCAATCGCAAGAGGGTCATCTTGATTGGGAACCACAACAAGTGTATACTGAGTTGAGTGAGTATCAAGTTAGTCCTGGGGAGAAGGTTTCAGTTTTGCCATCACAGAAGAGACTTGCAGTGTGGAGGTCTACCAAGGGGGATGGTGGTAGTGCTAAGCCGAGAAGAATGTCAGTGGATGCAGGGAGGGCAAGTGTAGGGCTTGAAAAACCAAGTGATAGAATGCATTTATGGGGCGGCGGGGAAGGTGATGGTAATAGAACTCCAACTGGTAATAGAACTCCAACTGGTAGTAGAACTCCAACTAAAGATGATCATGAGTTGCTTGGTTTACATTTACATGCTTCTAATAATCCAAGACAAACTTTGAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAGAATTATGAGCTCATGCTCAATTTACAATTAGGAATCAGGTAACGTAAATTTTTTTAAGAAACAGAAACAAACAATGTAGCATTTTTATTCATGATAATTGTATGAGTTGTTGCATATAACAGGCATTCTGTTGGAAGACCTGCCCCCTCAGCATCTTTAGATCTGAAGCCTTCAGCTTTTGATTCCAAAGAGAAAGTATGGACTAGATTTCCTCCCGAAGGATCCAAATATACGCCTCCACATCCGTCCAGTGAGTTCAAATGGAAGGACTATTGCCCAGTAGTTTTTAGGTAGTTAATCCTTATTAATTTTTATTATTAAGTTCCCTTTTGCATATTATAATTGATCAACATATAACTACCTCTTAAAAATTCCCTCAGAACTCTTAGGAAGCTATTCAAGGTGGATGCAGCTGATTACATGTTATCCATATGTGGAAATGATGCCCTGCGCGAACTTTCTTCGCCAGGAAAAAGTGGAAGCTTCTTTTACTTGACCAATGATGACCGTTATATGATTAAGACAATGAAGAAAGCTGAGGCTAAAGTGAGTTTCATACTAATTCTCTTATCGAAACCAAGGCACACACATTATTAGCATAATATTGATTTGGACATGCTGATTTTATTTTGCAGGCTCTCTTGAGAATGCTTCCCGCTTATTACAATCATTTTCGAGCATTTGAAAATGCTCTAGTGACAAAGTTTTATGGTTTACATTGTGTCAAGTTAAATGGACCTTCTCAGAAAAAGGTGTACCTAAATGTTGTAGACGATTTTTATTGTTTAAAAAAATTTAAGCATTTACTAGTATCTATCCTTATAGGAAAGCATACATTTCTAGTAAGAGAGAACTAAGAAATTCATATTTATAAAATTTATGGATTTCAGGTACGATTTATCATAATGGGCAACCTTTTTTGTTCTGAGTATACCATACATAGACGCTTTGATTTGAAGGGTTCTTCACTTGGGCGCATAACGACTAAGCCTGAGTCAGAGATTACTGAAACCACCATCCTTAAAGATCTTGATCTAAATTTTATATTTCGACTACAACGATCTTGGTTTCTAGAATTTTGCAGGTGATAAAAGTTAAATATATTATAGCAAATTTTAATGTGACCTAGCTAGCTATCATATAACATATTTCTATTTTTACCTTCTCGAAAAGAATAAGCAATTGAACCATGTCATGTGTTTGTTATATATGATCTCAGGCAAATCGACAGGGACTGTGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTCTACTAGTTGGCATTCATTTCAAAGATATATCACCAGAAGGAGATCTTATTCCTTCAGGATCTCATACTCCACTTGATGGTATTTTTCTTATCCATAATAGTATATAATATATATATATCTTATCTTAATTTTTGTTCATCCTCATTAAATTCCTAGAAAAACATTTTGGATGTTCAAATTTAGGTGATTCAGAGGGTGAAGGAACGCCCCGTATTTCACGAGAAGACATGGATCAACTTCTGCTAGATCCTTCCAGGTCACATGTCTTTCGAAAATTTTAATATAGAATCAATGTTTATGAGATAAATTCTTAAAACAATTATTGTATATTTGTTTGTAGATGGGCAAGTATCAAATTGGGAGTGAATATGCCAGCACGGGTTGAAAGGACAGTGAGAACAAGTGATTGTGAATTACAGCTCGTAGGAGAACCAATTGGAGAGTACTATGAGGTTGTCTTGTTTTTTGGTATCATTGACATACTTCAAGACTATGATATCAGTAAGAAGCTTGAGCATGCCTATAAGTCCATTCAATACGATCCAACCTCAATATCAGCCGTTGATCCAAGACAATACTCGAGGCGTTTTCGTGACTTCATATTCAAAATATTTTCACAAGATTCTTGA
Protein sequence

>MS.gene040673.t1

MMGKDSSMMKAWEATVKKTQAVAKKRANSIFGSTYVASQHGDHEEESKDEEVYHAERVLPNGDYYTGEWVDNFPHGKGKYLWTDGCIYVGEWFKGKTMGKGRFTWPSGPAYEGEFKSGYMDGIGAYTATNGDTYKGQWVMNLKHGHGETSYSNGDKYEGEWRRGLQDGQGRYEWKDENYYIGEWRNGSIWGKGSFVWSNGNRYDGYWEDGLPKGNGTFKWGDGSFYVGNWSKDPRDQSGTYYPSPGSSQSQEGHLDWEPQQVYTELSEYQVSPGEKVSVLPSQKRLAVWRSTKGDGGSAKPRRMSVDAGRASVGLEKPSDRMHLWGGGEGDGNRTPTGNRTPTGSRTPTKDDHELLGLHLHASNNPRQTLKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKPSAFDSKEKVWTRFPPEGSKYTPPHPSSEFKWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENALVTKFYGLHCVKLNGPSQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITTKPESEITETTILKDLDLNFIFRLQRSWFLEFCRQIDRDCELLEQEGIMDYSLLVGIHFKDISPEGDLIPSGSHTPLDGDSEGEGTPRISREDMDQLLLDPSRWASIKLGVNMPARVERTVRTSDCELQLVGEPIGEYYEVVLFFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFKIFSQDS