AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene046194

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046194.t1 MTR_3g014650 96.452 761 15 1 1 761 26 774 0.0 1531
MS.gene046194.t1 MTR_8g039100 75.359 767 167 7 1 761 1 751 0.0 1169
MS.gene046194.t1 MTR_1g050740 63.614 797 224 16 8 761 8 781 0.0 1009
MS.gene046194.t1 MTR_7g089950 58.467 809 259 16 7 761 7 792 0.0 926
MS.gene046194.t1 MTR_3g073100 53.333 720 278 15 59 760 52 731 0.0 708
MS.gene046194.t1 MTR_3g097260 52.028 715 270 9 59 760 50 704 0.0 702
MS.gene046194.t1 MTR_1g062740 43.384 786 340 17 60 757 47 815 0.0 609
MS.gene046194.t1 MTR_5g459450 62.500 416 140 6 358 760 320 732 2.12e-175 523
MS.gene046194.t1 MTR_5g459450 58.480 171 71 0 57 227 62 232 1.32e-63 227
MS.gene046194.t1 MTR_5g459450 32.258 124 84 0 134 257 70 193 1.51e-15 81.3
MS.gene046194.t1 MTR_5g459450 44.318 88 49 0 156 243 69 156 4.18e-14 76.6
MS.gene046194.t1 MTR_8g095170 59.012 405 147 6 358 760 279 666 5.54e-162 484
MS.gene046194.t1 MTR_8g095170 55.030 169 75 1 62 229 28 196 3.53e-56 204
MS.gene046194.t1 MTR_8g095170 36.508 126 79 1 110 234 30 155 2.83e-15 80.1
MS.gene046194.t1 MTR_8g095170 32.800 125 83 1 134 257 31 155 7.63e-11 66.2
MS.gene046194.t1 MTR_8g095170 65.169 267 90 2 358 624 279 542 3.05e-124 384
MS.gene046194.t1 MTR_8g095170 55.030 169 75 1 62 229 28 196 3.99e-56 202
MS.gene046194.t1 MTR_8g095170 36.508 126 79 1 110 234 30 155 5.40e-15 79.3
MS.gene046194.t1 MTR_8g088930 44.731 427 190 8 366 753 338 757 9.67e-119 375
MS.gene046194.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 1.32e-61 221
MS.gene046194.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.62e-14 78.2
MS.gene046194.t1 MTR_8g088930 44.626 428 190 8 366 753 338 758 1.95e-118 374
MS.gene046194.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 1.42e-61 221
MS.gene046194.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.69e-14 77.8
MS.gene046194.t1 MTR_8g088930 54.118 255 113 2 369 623 341 591 6.89e-91 299
MS.gene046194.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 1.19e-61 220
MS.gene046194.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.80e-14 77.8
MS.gene046194.t1 MTR_8g088930 54.118 255 113 2 369 623 341 591 6.99e-91 299
MS.gene046194.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 1.19e-61 220
MS.gene046194.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.80e-14 77.8
MS.gene046194.t1 MTR_8g080860 36.765 204 119 1 60 263 16 209 1.13e-35 137
MS.gene046194.t1 MTR_8g080860 36.765 204 119 1 60 263 12 205 1.54e-35 136
MS.gene046194.t1 MTR_4g107460 35.176 199 118 2 66 263 11 199 3.81e-31 125
MS.gene046194.t1 MTR_4g107460 35.294 187 121 0 62 248 54 240 4.27e-31 125
MS.gene046194.t1 MTR_4g107460 32.022 178 121 0 62 239 77 254 5.37e-20 92.4
MS.gene046194.t1 MTR_6g043150 40.230 174 104 0 61 234 7 180 1.78e-29 120
MS.gene046194.t1 MTR_6g043150 38.220 191 117 1 62 251 77 267 1.30e-27 114
MS.gene046194.t1 MTR_6g043150 37.079 178 112 0 57 234 141 318 3.13e-24 104
MS.gene046194.t1 MTR_6g043150 41.803 122 69 1 53 172 204 325 3.17e-19 90.1
MS.gene046194.t1 MTR_6g043150 34.266 143 70 2 110 251 10 129 1.79e-11 66.6
MS.gene046194.t1 MTR_8g092090 35.417 192 116 1 62 245 30 221 2.42e-29 117
MS.gene046194.t1 MTR_8g092090 33.152 184 105 2 88 263 10 183 6.78e-23 99.0
MS.gene046194.t1 MTR_8g092090 35.570 149 96 0 62 210 84 232 2.80e-21 94.4
MS.gene046194.t1 MTR_2g078470 37.566 189 117 1 64 251 79 267 5.93e-28 117
MS.gene046194.t1 MTR_2g078470 35.385 195 125 1 58 251 142 336 1.12e-26 113
MS.gene046194.t1 MTR_2g078470 39.378 193 116 1 60 251 6 198 1.25e-24 107
MS.gene046194.t1 MTR_2g078470 38.961 154 94 0 62 215 215 368 1.27e-22 100
MS.gene046194.t1 MTR_2g078470 29.947 187 131 0 62 248 169 355 4.41e-19 90.5
MS.gene046194.t1 MTR_2g078470 32.530 166 112 0 65 230 195 360 5.73e-17 84.0
MS.gene046194.t1 MTR_2g078470 41.667 96 56 0 51 146 273 368 2.52e-15 79.0
MS.gene046194.t1 MTR_5g010840 30.303 264 138 3 19 244 75 330 1.23e-25 110
MS.gene046194.t1 MTR_5g010840 31.915 188 120 1 58 245 175 354 3.57e-22 100
MS.gene046194.t1 MTR_5g010840 39.815 108 65 0 57 164 258 365 4.20e-16 81.6
MS.gene046194.t1 MTR_5g010840 31.937 191 106 2 49 239 204 370 2.87e-15 79.0
MS.gene046194.t1 MTR_8g095240 35.678 199 95 2 69 234 9 207 2.04e-25 110
MS.gene046194.t1 MTR_8g095240 32.701 211 131 3 63 262 118 328 4.99e-25 108
MS.gene046194.t1 MTR_8g095240 32.474 194 120 3 61 243 70 263 2.42e-20 94.7
MS.gene046194.t1 MTR_8g095240 30.688 189 111 2 85 263 2 180 6.17e-18 87.4
MS.gene046194.t1 MTR_3g005910 59.459 74 28 1 483 556 1 72 4.39e-24 96.7
MS.gene046194.t1 MTR_7g451440 32.804 189 123 1 61 245 189 377 8.28e-24 105
MS.gene046194.t1 MTR_4g099180 30.702 228 148 2 18 241 132 353 1.54e-23 104
MS.gene046194.t1 MTR_4g099180 29.605 152 98 1 94 245 165 307 1.79e-13 73.6
MS.gene046194.t1 MTR_8g080340 35.057 174 89 2 47 220 3 152 1.87e-23 98.2
MS.gene046194.t1 MTR_8g080340 33.099 142 94 1 134 274 20 161 4.32e-18 82.8
MS.gene046194.t1 MTR_8g080340 35.507 138 89 0 111 248 20 157 1.13e-16 79.0
MS.gene046194.t1 MTR_5g058920 34.706 170 111 0 65 234 198 367 9.49e-23 102
MS.gene046194.t1 MTR_5g058920 42.697 89 51 0 146 234 187 275 1.47e-13 73.9
MS.gene046194.t1 MTR_5g058920 32.609 138 93 0 109 246 196 333 7.95e-13 71.6
MS.gene046194.t1 MTR_8g007500 31.220 205 137 1 45 245 178 382 2.29e-22 101
MS.gene046194.t1 MTR_3g072650 32.164 171 116 0 64 234 185 355 2.40e-22 100
MS.gene046194.t1 MTR_3g072650 31.159 138 95 0 109 246 184 321 3.95e-14 75.9
MS.gene046194.t1 MTR_3g072650 34.375 128 84 0 66 193 233 360 5.39e-14 75.5
MS.gene046194.t1 MTR_3g072650 32.353 170 115 0 65 234 186 355 2.63e-22 100
MS.gene046194.t1 MTR_3g072650 31.159 138 95 0 109 246 184 321 2.91e-14 75.9
MS.gene046194.t1 MTR_3g072650 34.375 128 84 0 66 193 233 360 6.51e-14 74.7
MS.gene046194.t1 MTR_8g080350 30.172 232 123 3 63 255 125 356 2.96e-22 100
MS.gene046194.t1 MTR_8g080350 33.758 157 102 1 68 224 86 240 4.29e-16 81.6
MS.gene046194.t1 MTR_8g080350 32.886 149 85 2 58 191 189 337 4.15e-15 78.6
MS.gene046194.t1 MTR_8g080310 35.915 142 91 0 103 244 3 144 2.32e-21 91.7
MS.gene046194.t1 MTR_8g080310 35.570 149 96 0 86 234 9 157 2.42e-19 85.9
MS.gene046194.t1 MTR_8g080310 32.867 143 96 0 69 211 15 157 7.38e-18 81.6
MS.gene046194.t1 MTR_1g097110 33.333 198 110 8 437 620 1314 1503 3.80e-15 80.5
MS.gene046194.t1 MTR_8g023080 30.693 202 110 7 437 620 1532 1721 4.04e-13 73.9
MS.gene046194.t1 MTR_8g023080 30.693 202 110 7 437 620 1524 1713 4.54e-13 73.9
MS.gene046194.t1 MTR_3g023310 33.846 130 73 1 74 203 6 122 7.53e-13 67.8
MS.gene046194.t1 MTR_3g023310 33.884 121 67 1 123 243 9 116 1.25e-12 67.4
MS.gene046194.t1 MTR_8g092410 34.109 129 82 2 103 228 149 277 1.30e-12 70.5
MS.gene046194.t1 MTR_8g092410 32.414 145 91 4 113 253 138 279 3.03e-12 69.7
MS.gene046194.t1 MTR_4g124590 29.703 202 112 7 437 620 1524 1713 1.76e-12 72.0
MS.gene046194.t1 MTR_4g099180 31.724 145 93 1 35 179 149 287 1.98e-12 69.3
MS.gene046194.t1 MTR_4g099180 29.710 138 88 1 94 231 165 293 3.10e-12 68.9
MS.gene046194.t1 MTR_4g099180 36.667 90 57 0 145 234 161 250 1.78e-11 66.6
MS.gene046194.t1 MTR_4g099180 31.724 145 93 1 35 179 149 287 3.50e-12 68.9
MS.gene046194.t1 MTR_4g099180 29.286 140 90 1 94 233 165 295 4.64e-12 68.6
MS.gene046194.t1 MTR_4g099180 35.870 92 59 0 143 234 159 250 3.26e-11 65.9
MS.gene046194.t1 MTR_1g112280 30.709 127 88 0 89 215 615 741 3.88e-11 67.0
MS.gene046194.t1 MTR_4g085090 29.798 198 117 8 437 620 1466 1655 5.60e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046194.t1 AT3G07960 68.989 732 207 8 33 761 1 715 0.0 1045
MS.gene046194.t1 AT3G56960 62.750 800 236 16 1 760 1 778 0.0 1007
MS.gene046194.t1 AT3G56960 62.750 800 236 16 1 760 1 778 0.0 1007
MS.gene046194.t1 AT2G41210 62.642 795 240 15 1 761 1 772 0.0 992
MS.gene046194.t1 AT3G07960 67.767 636 188 6 33 667 1 620 0.0 895
MS.gene046194.t1 AT3G07960 69.331 613 173 5 33 644 1 599 0.0 888
MS.gene046194.t1 AT3G07960 69.331 613 173 5 33 644 1 599 0.0 888
MS.gene046194.t1 AT2G26420 50.765 719 293 15 50 760 39 704 0.0 688
MS.gene046194.t1 AT2G26420 50.348 719 310 15 50 760 39 718 0.0 687
MS.gene046194.t1 AT2G26420 50.348 719 310 15 50 760 39 718 0.0 687
MS.gene046194.t1 AT1G10900 40.654 765 372 15 60 760 7 753 0.0 555
MS.gene046194.t1 AT1G10900 34.074 135 89 0 102 236 3 137 4.14e-16 83.2
MS.gene046194.t1 AT1G10900 38.000 100 60 1 144 243 1 98 7.54e-15 79.0
MS.gene046194.t1 AT1G10900 40.654 765 372 15 60 760 7 753 0.0 555
MS.gene046194.t1 AT1G10900 34.074 135 89 0 102 236 3 137 4.14e-16 83.2
MS.gene046194.t1 AT1G10900 38.000 100 60 1 144 243 1 98 7.54e-15 79.0
MS.gene046194.t1 AT1G10900 40.654 765 372 15 60 760 7 753 0.0 555
MS.gene046194.t1 AT1G10900 34.074 135 89 0 102 236 3 137 4.14e-16 83.2
MS.gene046194.t1 AT1G10900 38.000 100 60 1 144 243 1 98 7.54e-15 79.0
MS.gene046194.t1 AT1G77740 60.698 430 156 6 341 760 327 753 2.02e-176 525
MS.gene046194.t1 AT1G77740 58.427 178 74 0 59 236 72 249 9.28e-69 241
MS.gene046194.t1 AT1G77740 31.452 124 85 0 134 257 78 201 1.28e-15 81.6
MS.gene046194.t1 AT1G77740 34.653 101 66 0 42 142 147 247 1.00e-14 78.6
MS.gene046194.t1 AT1G77740 40.426 94 56 0 150 243 71 164 8.39e-14 75.9
MS.gene046194.t1 AT1G77740 60.698 430 156 6 341 760 327 753 2.02e-176 525
MS.gene046194.t1 AT1G77740 58.427 178 74 0 59 236 72 249 9.28e-69 241
MS.gene046194.t1 AT1G77740 31.452 124 85 0 134 257 78 201 1.28e-15 81.6
MS.gene046194.t1 AT1G77740 34.653 101 66 0 42 142 147 247 1.00e-14 78.6
MS.gene046194.t1 AT1G77740 40.426 94 56 0 150 243 71 164 8.39e-14 75.9
MS.gene046194.t1 AT1G21980 61.743 413 145 6 358 760 342 751 1.13e-174 520
MS.gene046194.t1 AT1G21980 60.112 178 71 0 59 236 71 248 9.64e-71 246
MS.gene046194.t1 AT1G21980 30.645 124 86 0 134 257 77 200 3.20e-14 77.0
MS.gene046194.t1 AT1G21980 33.607 122 72 1 42 163 146 258 3.71e-13 73.6
MS.gene046194.t1 AT1G21980 39.362 94 57 0 150 243 70 163 6.48e-13 72.8
MS.gene046194.t1 AT3G09920 46.916 454 194 8 341 757 366 809 8.31e-130 405
MS.gene046194.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.91e-55 204
MS.gene046194.t1 AT3G09920 46.916 454 194 8 341 757 366 809 8.31e-130 405
MS.gene046194.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.91e-55 204
MS.gene046194.t1 AT3G09920 46.916 454 194 8 341 757 366 809 8.31e-130 405
MS.gene046194.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.91e-55 204
MS.gene046194.t1 AT3G09920 46.916 454 194 8 341 757 366 809 8.31e-130 405
MS.gene046194.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.91e-55 204
MS.gene046194.t1 AT1G60890 46.189 433 186 7 367 759 342 767 8.39e-122 384
MS.gene046194.t1 AT1G60890 45.320 203 111 0 54 256 1 203 1.63e-57 210
MS.gene046194.t1 AT1G60890 46.189 433 186 7 367 759 354 779 9.84e-122 384
MS.gene046194.t1 AT1G60890 45.960 198 107 0 59 256 18 215 4.00e-57 209
MS.gene046194.t1 AT1G01460 34.856 416 203 9 405 760 15 422 3.40e-72 242
MS.gene046194.t1 AT4G01190 35.584 385 207 8 410 758 12 391 3.11e-69 233
MS.gene046194.t1 AT4G01190 35.584 385 207 8 410 758 22 401 4.59e-69 233
MS.gene046194.t1 AT4G01190 35.584 385 207 8 410 758 22 401 4.59e-69 233
MS.gene046194.t1 AT1G77660 34.884 172 112 0 63 234 177 348 2.09e-25 110
MS.gene046194.t1 AT1G77660 34.375 128 84 0 66 193 226 353 1.35e-15 80.5
MS.gene046194.t1 AT1G21920 32.292 192 130 0 43 234 153 344 1.14e-23 103
MS.gene046194.t1 AT1G21920 34.328 134 88 0 58 191 214 347 6.04e-15 77.8
MS.gene046194.t1 AT1G21920 38.462 104 64 0 66 169 245 348 4.38e-11 65.9
MS.gene046194.t1 AT1G21920 32.292 192 130 0 43 234 153 344 1.50e-23 104
MS.gene046194.t1 AT1G21920 34.328 134 88 0 58 191 214 347 5.23e-15 78.6
MS.gene046194.t1 AT1G21920 38.462 104 64 0 66 169 245 348 2.80e-11 66.6
MS.gene046194.t1 AT2G35170 33.511 188 120 2 59 242 222 408 5.57e-23 103
MS.gene046194.t1 AT2G35170 30.719 153 97 1 94 246 219 362 4.08e-16 82.4
MS.gene046194.t1 AT2G35170 30.968 155 107 0 91 245 230 384 2.84e-15 79.7
MS.gene046194.t1 AT4G17080 32.418 182 119 1 65 242 258 439 1.04e-22 103
MS.gene046194.t1 AT4G17080 35.821 134 86 0 61 194 300 433 5.08e-18 88.6
MS.gene046194.t1 AT4G17080 30.921 152 96 1 94 245 250 392 1.21e-16 84.3
MS.gene046194.t1 AT4G17080 35.088 114 74 0 133 246 257 370 1.16e-11 68.6
MS.gene046194.t1 AT3G14270 31.579 171 89 6 468 620 1536 1696 1.70e-12 72.0
MS.gene046194.t1 AT3G14270 31.579 171 89 6 468 620 1536 1696 1.70e-12 72.0
MS.gene046194.t1 AT4G33240 29.703 202 112 7 437 620 1464 1653 1.06e-11 69.3
MS.gene046194.t1 AT4G33240 29.703 202 112 7 437 620 1468 1657 1.07e-11 69.3
MS.gene046194.t1 AT4G33240 29.703 202 112 7 437 620 1468 1657 1.07e-11 69.3
MS.gene046194.t1 AT4G33240 29.703 202 112 7 437 620 1468 1657 1.07e-11 69.3
MS.gene046194.t1 AT4G33240 29.703 202 112 7 437 620 1467 1656 1.11e-11 69.3
MS.gene046194.t1 AT4G33240 31.579 171 89 6 468 620 1494 1654 1.24e-11 69.3
MS.gene046194.t1 AT4G33240 31.579 171 89 6 468 620 1457 1617 1.31e-11 68.9

Find 182 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGGAATGGTTCGTTTAA+TGG 0.232886 3.3:+9610771 MS.gene046194:CDS
TCTTCAACATGAAAGAATTA+TGG 0.236569 3.3:+9614243 MS.gene046194:CDS
TCTAGTCCAAACTTTCTCTT+TGG 0.262398 3.3:-9612088 None:intergenic
TTGATCCCAAAGAGAAAGTT+TGG 0.270301 3.3:+9612082 MS.gene046194:CDS
TAAGTACCACTTTGTTCTTT+AGG 0.272506 3.3:-9610921 None:intergenic
ATGGTCAAGGTAAGTATCTT+TGG 0.278950 3.3:+9610445 MS.gene046194:CDS
ACCCTTCATGTGAATTTAGA+TGG 0.284141 3.3:+9612145 MS.gene046194:CDS
CTTTCAAGTCAAACCGTCTA+TGG 0.287069 3.3:-9613321 None:intergenic
GTGATACTTATAAAGGGAAT+TGG 0.288743 3.3:+9610613 MS.gene046194:CDS
TATGATGGTTGTTGGGAAAA+TGG 0.296406 3.3:+9610828 MS.gene046194:CDS
TGTTTCAGGTGGATTCAATT+AGG 0.296744 3.3:+9614608 MS.gene046194:intron
GACTTGAAAGGTTCGACGTT+TGG 0.302066 3.3:+9613334 MS.gene046194:CDS
GGTACAATGATGTGGCAAAA+TGG 0.307349 3.3:+9610798 MS.gene046194:CDS
TTATGATGGTGAGTGGAAAA+AGG 0.313331 3.3:+9610689 MS.gene046194:CDS
GGTAAGTATCTTTGGATTGA+TGG 0.314470 3.3:+9610453 MS.gene046194:CDS
GGAGGAATGGTTCGTTTAAT+GGG 0.327301 3.3:+9610772 MS.gene046194:CDS
TCCTCCATTGACCAATATAA+TGG 0.339875 3.3:-9610755 None:intergenic
TGCTTATTATAAACACGTTC+GGG 0.345203 3.3:+9613093 MS.gene046194:CDS
TACACCTTGCGGTCGCAGTT+CGG 0.346435 3.3:+9614321 MS.gene046194:CDS
ACTACTGTCCGGTAGTATTC+AGG 0.348899 3.3:+9612172 MS.gene046194:CDS
TCATCTGGTGATACTTATAA+AGG 0.349922 3.3:+9610606 MS.gene046194:CDS
ACACCTTGCGGTCGCAGTTC+GGG 0.350850 3.3:+9614322 MS.gene046194:CDS
CTAGTCCAAACTTTCTCTTT+GGG 0.371473 3.3:-9612087 None:intergenic
CTTCATTGTGTAAAACTAAC+AGG 0.373986 3.3:+9613151 MS.gene046194:CDS
ATTGAATTGGCCGGGTTTAG+AGG 0.376512 3.3:+9611067 MS.gene046194:CDS
CTGCTTATTATAAACACGTT+CGG 0.381469 3.3:+9613092 MS.gene046194:CDS
CATGCCAGCGCGAGCCGAAA+TGG 0.381500 3.3:+9614637 MS.gene046194:CDS
ATGTGGGAATGAAGCTCTTC+GGG 0.382032 3.3:+9612741 MS.gene046194:CDS
CTTCATGCAGACAAGTTGAT+AGG 0.393068 3.3:+9614209 MS.gene046194:intron
GGCGTATGCTTGGATCCTTC+TGG 0.393211 3.3:-9612117 None:intergenic
GGAATAGGTATGATGGTTGT+TGG 0.396978 3.3:+9610820 MS.gene046194:CDS
CATGGTAAAGGGACTTATAT+AGG 0.402597 3.3:+9610582 MS.gene046194:CDS
TGAATCTGCAACTAGGTATC+AGG 0.404283 3.3:+9611333 MS.gene046194:CDS
CCGGGTTTAGAGGAAGATAA+AGG 0.411765 3.3:+9611077 MS.gene046194:CDS
TGGGGAAGGGTAGGTTTAGT+TGG 0.420486 3.3:+9610514 MS.gene046194:CDS
CGAAAGGGAATGGTACGTTT+AGG 0.421918 3.3:+9610856 MS.gene046194:CDS
AAAATCTGCATTTGATGAGT+TGG 0.424427 3.3:+9611202 MS.gene046194:CDS
TCAGGTTCGCTTTGTCATCA+TGG 0.425258 3.3:+9613270 MS.gene046194:intron
AGAAAGGAACTCATGGTAAT+GGG 0.427258 3.3:+9611120 MS.gene046194:CDS
GTGGGCTCTACTTCTGCCTC+AGG 0.427374 3.3:-9613373 None:intergenic
GGGAAAATGGTTTGCCGAAA+GGG 0.430287 3.3:+9610841 MS.gene046194:CDS
TGATGTGGCAAAATGGGAAT+AGG 0.431149 3.3:+9610805 MS.gene046194:CDS
ACGCTGGTCACGAAGTTCTT+CGG 0.431752 3.3:+9613127 MS.gene046194:CDS
CGCGAGCCGAAATGGCTTTG+CGG 0.434207 3.3:+9614645 MS.gene046194:CDS
CTTCGGACAAGATATTGAAT+TGG 0.439713 3.3:+9611054 MS.gene046194:CDS
AAGAAAGGAACTCATGGTAA+TGG 0.441568 3.3:+9611119 MS.gene046194:CDS
CACTTTCGAGATACAAGTCC+TGG 0.443801 3.3:+9614289 MS.gene046194:CDS
AAATCTGCATTTGATGAGTT+GGG 0.447343 3.3:+9611203 MS.gene046194:CDS
GGGACTTATATAGGTTCATC+TGG 0.447511 3.3:+9610591 MS.gene046194:CDS
AATCAGCAACTGCAAAGAAA+AGG 0.448593 3.3:+9610262 MS.gene046194:CDS
TTCCATCTAAATTCACATGA+AGG 0.448605 3.3:-9612147 None:intergenic
TGATACTTATAAAGGGAATT+GGG 0.449590 3.3:+9610614 MS.gene046194:CDS
ATGGACATGGTAGGTATCAA+TGG 0.450321 3.3:+9610721 MS.gene046194:CDS
TGCATCCACTCCTGAAAGAC+GGG 0.450557 3.3:-9614380 None:intergenic
TGAATGGCATTGTCAAAGCC+TGG 0.453631 3.3:+9610223 MS.gene046194:CDS
CTAGTGATGCTCATCTTGAA+TGG 0.455044 3.3:+9610958 MS.gene046194:CDS
TGAGTTCCTTTCTTATGAAT+CGG 0.455684 3.3:-9611110 None:intergenic
AGTGGTACTTATTATCCATC+TGG 0.456958 3.3:+9610933 MS.gene046194:CDS
CTTCGGGAACTCTCATCTCC+TGG 0.461877 3.3:+9612757 MS.gene046194:CDS
TTTCCTAACTGTTGATTCCC+AGG 0.463471 3.3:-9610241 None:intergenic
CAGGTTCGCTTTGTCATCAT+GGG 0.464272 3.3:+9613271 MS.gene046194:intron
TATGTGGGAATGAAGCTCTT+CGG 0.467027 3.3:+9612740 MS.gene046194:CDS
AATTATGGATTACAGTATGT+TGG 0.471440 3.3:+9614258 MS.gene046194:CDS
CTTGTTATATGCATGGTAAA+GGG 0.472980 3.3:+9610571 MS.gene046194:CDS
GAATAGGTATGATGGTTGTT+GGG 0.474191 3.3:+9610821 MS.gene046194:CDS
TATGTAGGTGAATGGATTCA+AGG 0.474984 3.3:+9610483 MS.gene046194:CDS
TCTATTTGACGAACGATGAC+CGG 0.479278 3.3:+9612797 MS.gene046194:CDS
CTAAACGTACCATTCCCTTT+CGG 0.479325 3.3:-9610855 None:intergenic
AAAGCCATTTCGGCTCGCGC+TGG 0.481604 3.3:-9614641 None:intergenic
AGAGCCCACAACAACACTTA+AGG 0.485002 3.3:+9613387 MS.gene046194:CDS
TCAACGGCTGAGATTGAAGT+TGG 0.485913 3.3:-9614815 None:intergenic
CATAGACGGTTTGACTTGAA+AGG 0.488527 3.3:+9613322 MS.gene046194:CDS
AATGGTTCGTTTAATGGGAA+TGG 0.492406 3.3:+9610777 MS.gene046194:CDS
CATCTGGTGATACTTATAAA+GGG 0.494249 3.3:+9610607 MS.gene046194:CDS
AGATCCTTAAGTGTTGTTGT+GGG 0.494833 3.3:-9613391 None:intergenic
GTACAATGATGTGGCAAAAT+GGG 0.495315 3.3:+9610799 MS.gene046194:CDS
GGACAAGATATTGAATTGGC+CGG 0.497558 3.3:+9611058 MS.gene046194:CDS
TATTTCGGTTGCAGAAGTCT+TGG 0.499689 3.3:+9613428 MS.gene046194:CDS
TAGTGATGCTCATCTTGAAT+GGG 0.499937 3.3:+9610959 MS.gene046194:CDS
CAATATCTTGTCCGAAGGAT+AGG 0.500345 3.3:-9611048 None:intergenic
ACTTGTTATATGCATGGTAA+AGG 0.500619 3.3:+9610570 MS.gene046194:CDS
TCAAGTGATGCACTTGGAGC+AGG 0.501043 3.3:-9612042 None:intergenic
AACAGGAAGTGCACAAAAGA+AGG 0.502174 3.3:+9613168 MS.gene046194:CDS
AAGCCTGGGAATCAACAGTT+AGG 0.503594 3.3:+9610238 MS.gene046194:CDS
AAGCGTTTCGAGTATAGCCT+TGG 0.504382 3.3:-9614839 None:intergenic
CCTTTATCTTCCTCTAAACC+CGG 0.504792 3.3:-9611077 None:intergenic
AGACTTTCAAGAGAATGAGC+AGG 0.504965 3.3:+9610196 None:intergenic
GTTGAAAAGACTATGCCTAA+TGG 0.507158 3.3:+9610384 MS.gene046194:CDS
AAGATCCTTAAGTGTTGTTG+TGG 0.507700 3.3:-9613392 None:intergenic
ATCAGCAACTGCAAAGAAAA+GGG 0.510464 3.3:+9610263 MS.gene046194:CDS
GAGGCAATTCTGTTCAAAGC+TGG 0.510720 3.3:+9611225 MS.gene046194:CDS
GTTGTATGTATGTAGGTGAA+TGG 0.511069 3.3:+9610475 MS.gene046194:CDS
CGAGTATAGCCTTGGATCAA+CGG 0.514077 3.3:-9614831 None:intergenic
TTCAAGACTTGTTATATGCA+TGG 0.518520 3.3:+9610564 MS.gene046194:CDS
CAGTTGGTTGGCGAACCAAC+CGG 0.520429 3.3:+9614689 MS.gene046194:CDS
ATTGATATCATGTAATCAGC+AGG 0.520915 3.3:-9612718 None:intergenic
CCTCCATCATCGAATTCAGA+TGG 0.521013 3.3:-9614355 None:intergenic
ATTGATGGTTGTATGTATGT+AGG 0.525013 3.3:+9610468 MS.gene046194:CDS
GGTAATGAGAGTTATCCTAA+TGG 0.527045 3.3:+9610660 MS.gene046194:CDS
GACAAGATATTGAATTGGCC+GGG 0.530886 3.3:+9611059 MS.gene046194:CDS
GGAACCATTATATTGGTCAA+TGG 0.532331 3.3:+9610751 MS.gene046194:CDS
CTCAATATGTCATCCATAGA+CGG 0.533506 3.3:+9613308 MS.gene046194:CDS
CCTTCATATGTAGCACCACT+AGG 0.535657 3.3:-9610537 None:intergenic
GATAATATCATACATCTCTC+CGG 0.536661 3.3:-9614708 None:intergenic
TCCATCTAAATTCACATGAA+GGG 0.538947 3.3:-9612146 None:intergenic
CGAACGTGTTTATAATAAGC+AGG 0.541318 3.3:-9613091 None:intergenic
CTCCATCATCGAATTCAGAT+GGG 0.542680 3.3:-9614354 None:intergenic
TCTACATTGGCTACAGACAT+TGG 0.544183 3.3:-9610303 None:intergenic
ATGGATTACAGTATGTTGGT+TGG 0.545087 3.3:+9614262 MS.gene046194:CDS
CCTTTAGATATAGTCTCTCC+TGG 0.546752 3.3:-9611287 None:intergenic
GTCGTCATCGTCTTCACAAG+AGG 0.549154 3.3:+9610353 MS.gene046194:CDS
TATATTGGTCAATGGAGGAA+TGG 0.550067 3.3:+9610759 MS.gene046194:CDS
CAAAATGGGAATAGGTATGA+TGG 0.552931 3.3:+9610813 MS.gene046194:CDS
GGCATCATAGACATATTACA+AGG 0.552961 3.3:+9614740 MS.gene046194:CDS
CAATCTCAGCCGTTGATCCA+AGG 0.553953 3.3:+9614822 MS.gene046194:CDS
TTCATGCAGACAAGTTGATA+GGG 0.556313 3.3:+9614210 MS.gene046194:intron
GATTACATGATATCAATATG+TGG 0.557421 3.3:+9612724 MS.gene046194:CDS
GGACATTACGACCTATCCTT+CGG 0.558170 3.3:+9611037 MS.gene046194:CDS
CTTATGTTGAATCTGCAACT+AGG 0.559603 3.3:+9611326 MS.gene046194:CDS
TATGCATACCTGAATACTAC+CGG 0.561063 3.3:-9612180 None:intergenic
AGGGTGAGGTGGCGTATGCT+TGG 0.561454 3.3:-9612127 None:intergenic
AATGGTTTGCCGAAAGGGAA+TGG 0.561505 3.3:+9610846 MS.gene046194:CDS
TGGACTAGATTTCCACCAGA+AGG 0.561843 3.3:+9612102 MS.gene046194:CDS
CTGCATCCACTCCTGAAAGA+CGG 0.563302 3.3:-9614381 None:intergenic
CCAGGAGAGACTATATCTAA+AGG 0.568260 3.3:+9611287 MS.gene046194:CDS
GATAAGTTTCCACATGGTCA+AGG 0.568574 3.3:+9610432 MS.gene046194:CDS
CACATGTGAAAGTCCTCAGT+TGG 0.574735 3.3:+9614673 MS.gene046194:CDS
TGGGAAAATGGTTTGCCGAA+AGG 0.575980 3.3:+9610840 MS.gene046194:CDS
TCAACAGTGAAAACCTCTTG+AGG 0.576516 3.3:-9610984 None:intergenic
GAATGGCATTGTCAAAGCCT+GGG 0.576526 3.3:+9610224 MS.gene046194:CDS
ATGGTAATGGGAAGCCTAGA+CGG 0.578110 3.3:+9611132 MS.gene046194:CDS
GACGGAGTTCTGCTGATGGA+AGG 0.579268 3.3:+9611150 MS.gene046194:CDS
ATTACATGATATCAATATGT+GGG 0.581330 3.3:+9612725 MS.gene046194:CDS
CCATCAGCAGAACTCCGTCT+AGG 0.583331 3.3:-9611146 None:intergenic
GTCATCTTCATCATCTACAT+TGG 0.584009 3.3:-9610316 None:intergenic
ATAAAAGCTCCTAAAAGACC+AGG 0.584431 3.3:+9611269 MS.gene046194:CDS
CCTAGTGGTGCTACATATGA+AGG 0.584675 3.3:+9610537 MS.gene046194:CDS
TCTTGAATGGGATCCTCAAG+AGG 0.584761 3.3:+9610971 MS.gene046194:CDS
GGTAGGTTTAGTTGGCCTAG+TGG 0.586699 3.3:+9610522 MS.gene046194:CDS
ATATCATACATCTCTCCGGT+TGG 0.587123 3.3:-9614704 None:intergenic
ATTCATAAGAAAGGAACTCA+TGG 0.587474 3.3:+9611113 MS.gene046194:CDS
GACTTTCAAGAGAATGAGCA+GGG 0.592006 3.3:+9610197 None:intergenic
CCTAGACGGAGTTCTGCTGA+TGG 0.594375 3.3:+9611146 MS.gene046194:CDS
TGTGAAAGTCCTCAGTTGGT+TGG 0.594621 3.3:+9614677 MS.gene046194:CDS
ACCCCATCTGAATTCGATGA+TGG 0.596388 3.3:+9614352 MS.gene046194:CDS
GCTCCCGAACTGCGACCGCA+AGG 0.599381 3.3:-9614325 None:intergenic
CCATCTGAATTCGATGATGG+AGG 0.601211 3.3:+9614355 MS.gene046194:CDS
TTCAAATCAAGTGATGCACT+TGG 0.601607 3.3:-9612048 None:intergenic
CTTAGTAATCACAGCTCTGA+AGG 0.602212 3.3:+9611173 MS.gene046194:CDS
GGCGGCAATGTTACACCTTG+CGG 0.604078 3.3:+9614310 MS.gene046194:CDS
CAAGGTGTAACATTGCCGCC+AGG 0.605952 3.3:-9614307 None:intergenic
AAGGGAATGGTACGTTTAGG+TGG 0.606012 3.3:+9610859 MS.gene046194:CDS
ATCTCATCATAGATCCTAGT+CGG 0.606584 3.3:+9614407 MS.gene046194:CDS
CTAAATTCACATGAAGGGTG+AGG 0.607299 3.3:-9612141 None:intergenic
CAATTCAATATCTTGTCCGA+AGG 0.609486 3.3:-9611053 None:intergenic
GGTACGTTTAGGTGGTCTGA+TGG 0.617080 3.3:+9610867 MS.gene046194:CDS
GTGTGCAAAATGGACATGGT+AGG 0.621136 3.3:+9610712 MS.gene046194:CDS
ACCATTATATTGGTCAATGG+AGG 0.622374 3.3:+9610754 MS.gene046194:CDS
AAAGATCCTAAAGAACAAAG+TGG 0.627694 3.3:+9610915 MS.gene046194:CDS
TAGATGGAAAGACTACTGTC+CGG 0.632964 3.3:+9612161 MS.gene046194:CDS
AATTCACATGAAGGGTGAGG+TGG 0.633039 3.3:-9612138 None:intergenic
ATGTATGATTTGTCCTTGTG+AGG 0.634796 3.3:+9611016 MS.gene046194:CDS
TGAGCATCACTAGAACCAGA+TGG 0.635426 3.3:-9610948 None:intergenic
AGAATGAGCAGGGAGCTGAA+TGG 0.636348 3.3:+9610207 None:intergenic
GTTGGTTCGCCAACCAACTG+AGG 0.640547 3.3:-9614686 None:intergenic
AGATACTTACCTTGACCATG+TGG 0.643398 3.3:-9610441 None:intergenic
GTATGCTTGGATCCTTCTGG+TGG 0.648961 3.3:-9612114 None:intergenic
GCATCCACTCCTGAAAGACG+GGG 0.661898 3.3:-9614379 None:intergenic
TCTGCATTTGATGAGTTGGG+AGG 0.661937 3.3:+9611206 MS.gene046194:CDS
AAGGGTGTGCAAAATGGACA+TGG 0.663197 3.3:+9610708 MS.gene046194:CDS
ATGGGAATGGTACAATGATG+TGG 0.671388 3.3:+9610790 MS.gene046194:CDS
TGATTGAAAATATACCGACT+AGG 0.671964 3.3:-9614421 None:intergenic
AGTAATCACAGCTCTGAAGG+AGG 0.672594 3.3:+9611176 MS.gene046194:CDS
CCTCAGGTTTATCAGTAGTG+CGG 0.673216 3.3:-9613357 None:intergenic
CATCCACTCCTGAAAGACGG+GGG 0.675036 3.3:-9614378 None:intergenic
TGGCTTGATAAGTTTCCACA+TGG 0.676296 3.3:+9610426 MS.gene046194:CDS
TCCATCATCGAATTCAGATG+GGG 0.681693 3.3:-9614353 None:intergenic
ACTTGGAGCAGGTCTTCCAA+CGG 0.684197 3.3:-9612031 None:intergenic
CCGCACTACTGATAAACCTG+AGG 0.697681 3.3:+9613357 MS.gene046194:CDS
TAGGTCGTAATGTCCTCACA+AGG 0.705306 3.3:-9611029 None:intergenic
TTTCGAGATACAAGTCCTGG+CGG 0.727190 3.3:+9614292 MS.gene046194:CDS
AAAGCTGGAATAAATCGCCG+CGG 0.771520 3.3:+9611240 MS.gene046194:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATACATTTATATAAAAA+GGG + chr3.3:9611570-9611589 MS.gene046194:intron 10.0%
!!! TTGACTTAAATTTTATATTT+CGG + chr3.3:9613413-9613432 MS.gene046194:CDS 10.0%
!! AACAGAAAATATTTAATGTT+TGG - chr3.3:9614517-9614536 None:intergenic 15.0%
!! AACTTTATATATAAGTTAGA+AGG + chr3.3:9614089-9614108 MS.gene046194:intron 15.0%
!! ATAAATTACATTTCAAAAGA+AGG - chr3.3:9613945-9613964 None:intergenic 15.0%
!! CTAAATTACAAATATTTGAT+AGG - chr3.3:9614134-9614153 None:intergenic 15.0%
!! CTGAATACATTTATATAAAA+AGG + chr3.3:9611569-9611588 MS.gene046194:intron 15.0%
!! GAATACATTTATATAAAAAG+GGG + chr3.3:9611571-9611590 MS.gene046194:intron 15.0%
!! GATATTTAACATAAGAAATA+GGG + chr3.3:9613774-9613793 MS.gene046194:intron 15.0%
!! TGATATTTAACATAAGAAAT+AGG + chr3.3:9613773-9613792 MS.gene046194:intron 15.0%
!! TTATATATAAAGTTTCAAAC+AGG - chr3.3:9614083-9614102 None:intergenic 15.0%
!!! TATGATATTATCATCTTTTT+TGG + chr3.3:9614719-9614738 MS.gene046194:CDS 15.0%
!! AAAAAATATTACATGATTGC+AGG + chr3.3:9613051-9613070 MS.gene046194:intron 20.0%
!! AATTGCATTTCATAAATTTC+AGG + chr3.3:9613252-9613271 MS.gene046194:intron 20.0%
!! ATTACATGATATCAATATGT+GGG + chr3.3:9612725-9612744 MS.gene046194:CDS 20.0%
!! TATTTAATGTTTGGTCTAAT+TGG - chr3.3:9614508-9614527 None:intergenic 20.0%
!! TGATTGCATTTATAATTTCA+GGG + chr3.3:9612669-9612688 MS.gene046194:intron 20.0%
!! TTGATTGCATTTATAATTTC+AGG + chr3.3:9612668-9612687 MS.gene046194:intron 20.0%
!!! AAACATATTATTAGCTTCTT+GGG + chr3.3:9613557-9613576 MS.gene046194:intron 20.0%
!!! AATTTTCGTTATAAAGTGAA+GGG - chr3.3:9612918-9612937 None:intergenic 20.0%
!!! GTGTTTATAAACTTTTACTT+TGG + chr3.3:9613201-9613220 MS.gene046194:intron 20.0%
!!! TAAACATATTATTAGCTTCT+TGG + chr3.3:9613556-9613575 MS.gene046194:intron 20.0%
!!! TAATTTTCGTTATAAAGTGA+AGG - chr3.3:9612919-9612938 None:intergenic 20.0%
!!! TATTTATGTAAGCAAAGTTT+TGG + chr3.3:9612223-9612242 MS.gene046194:intron 20.0%
!!! TGCAATCATGTAATATTTTT+TGG - chr3.3:9613052-9613071 None:intergenic 20.0%
!!! TTAACATTGATAGCTATAAA+TGG + chr3.3:9611910-9611929 MS.gene046194:intron 20.0%
!!! TTTTTCTTTTTTTTTGACGT+CGG + chr3.3:9614168-9614187 MS.gene046194:intron 20.0%
! AAAAATGGGAACCATTATAT+TGG + chr3.3:9610744-9610763 MS.gene046194:CDS 25.0%
! AAGAGACTATTTGTAATACT+AGG - chr3.3:9612595-9612614 None:intergenic 25.0%
! ATCATATGACTAAAAATTGC+AGG - chr3.3:9613725-9613744 None:intergenic 25.0%
! ATTATCGAACGAAATTGATT+TGG - chr3.3:9611680-9611699 None:intergenic 25.0%
! GAAATTTCCTAATGAAAACT+CGG + chr3.3:9611865-9611884 MS.gene046194:intron 25.0%
! GATTACATGATATCAATATG+TGG + chr3.3:9612724-9612743 MS.gene046194:CDS 25.0%
! GGAAAAAAAAAGACTATGTT+TGG - chr3.3:9611768-9611787 None:intergenic 25.0%
! GGGTTATGAATTTGAAAAAT+GGG + chr3.3:9610634-9610653 MS.gene046194:CDS 25.0%
! GGTTATGAATTTGAAAAATG+GGG + chr3.3:9610635-9610654 MS.gene046194:CDS 25.0%
! GTAAAAGTTTATAAACACCT+AGG - chr3.3:9613199-9613218 None:intergenic 25.0%
! GTTTGAAAGTTGAAACTTTA+AGG - chr3.3:9613828-9613847 None:intergenic 25.0%
! TCTTCAACATGAAAGAATTA+TGG + chr3.3:9614243-9614262 MS.gene046194:CDS 25.0%
! TGATACTTATAAAGGGAATT+GGG + chr3.3:9610614-9610633 MS.gene046194:CDS 25.0%
! TGATAGGAAAAACTGTATTA+GGG - chr3.3:9614118-9614137 None:intergenic 25.0%
! TGGGTTATGAATTTGAAAAA+TGG + chr3.3:9610633-9610652 MS.gene046194:CDS 25.0%
! TTACTCTCATATCATCTTTA+TGG + chr3.3:9611398-9611417 MS.gene046194:intron 25.0%
! TTCAAAAGAAGGCTAAAATA+AGG - chr3.3:9613934-9613953 None:intergenic 25.0%
! TTGAGAGAATTGATAAAAGA+AGG - chr3.3:9612895-9612914 None:intergenic 25.0%
! TTGATAGGAAAAACTGTATT+AGG - chr3.3:9614119-9614138 None:intergenic 25.0%
!! AAAATCAATTCCACAACTTT+TGG + chr3.3:9611713-9611732 MS.gene046194:intron 25.0%
!! AAAATTGATTCCAAAAGTTG+TGG - chr3.3:9611726-9611745 None:intergenic 25.0%
!! AAAGTGAGTTTCATTTTCAT+TGG + chr3.3:9612853-9612872 MS.gene046194:intron 25.0%
!! AATTATGGATTACAGTATGT+TGG + chr3.3:9614258-9614277 MS.gene046194:CDS 25.0%
!! TTCCTTGATTCTAATTTTCA+CGG + chr3.3:9611971-9611990 MS.gene046194:intron 25.0%
!!! AAATAAGGTCATTTTGTTCA+CGG - chr3.3:9613919-9613938 None:intergenic 25.0%
!!! GTTTGTTTTGAAGTTATTGA+TGG + chr3.3:9613587-9613606 MS.gene046194:intron 25.0%
!!! TTGTCTTTACTTTTGAACTT+TGG + chr3.3:9613967-9613986 MS.gene046194:intron 25.0%
AAAATCTGCATTTGATGAGT+TGG + chr3.3:9611202-9611221 MS.gene046194:CDS 30.0%
AAACCAAAACTTGTAAAGTG+TGG - chr3.3:9613533-9613552 None:intergenic 30.0%
AAAGATCCTAAAGAACAAAG+TGG + chr3.3:9610915-9610934 MS.gene046194:CDS 30.0%
AAATCTGCATTTGATGAGTT+GGG + chr3.3:9611203-9611222 MS.gene046194:CDS 30.0%
AGGCTAAAAATCAATTGTAG+AGG + chr3.3:9611610-9611629 MS.gene046194:intron 30.0%
ATGAATTTGAAAAATGGGGA+TGG + chr3.3:9610639-9610658 MS.gene046194:CDS 30.0%
ATTCATAAGAAAGGAACTCA+TGG + chr3.3:9611113-9611132 MS.gene046194:CDS 30.0%
ATTGATATCATGTAATCAGC+AGG - chr3.3:9612721-9612740 None:intergenic 30.0%
CATCTGGTGATACTTATAAA+GGG + chr3.3:9610607-9610626 MS.gene046194:CDS 30.0%
CCATCATAAAAATCACCATT+AGG - chr3.3:9610678-9610697 None:intergenic 30.0%
CTGCTTATTATAAACACGTT+CGG + chr3.3:9613092-9613111 MS.gene046194:CDS 30.0%
CTTCATTGTGTAAAACTAAC+AGG + chr3.3:9613151-9613170 MS.gene046194:CDS 30.0%
GAGAAAATATCACATCAAAG+TGG - chr3.3:9612987-9613006 None:intergenic 30.0%
GAGCTTAATTATTGTGTGTT+TGG + chr3.3:9611428-9611447 MS.gene046194:intron 30.0%
GATAATATCATACATCTCTC+CGG - chr3.3:9614711-9614730 None:intergenic 30.0%
GCATTCAATGAATGAATGAA+AGG + chr3.3:9614034-9614053 MS.gene046194:intron 30.0%
GCTTAAATTAGAATCAAGTC+TGG + chr3.3:9611651-9611670 MS.gene046194:intron 30.0%
GTAGGTATCAATGGAAAAAT+GGG + chr3.3:9610730-9610749 MS.gene046194:CDS 30.0%
GTGAAAATTAGAATCAAGGA+AGG - chr3.3:9611972-9611991 None:intergenic 30.0%
GTGATACTTATAAAGGGAAT+TGG + chr3.3:9610613-9610632 MS.gene046194:CDS 30.0%
TAAATTAGAATCAAGTCTGG+AGG + chr3.3:9611654-9611673 MS.gene046194:intron 30.0%
TAAGTACCACTTTGTTCTTT+AGG - chr3.3:9610924-9610943 None:intergenic 30.0%
TCAATATATATTCTCCACGT+GGG - chr3.3:9611847-9611866 None:intergenic 30.0%
TCATCTGGTGATACTTATAA+AGG + chr3.3:9610606-9610625 MS.gene046194:CDS 30.0%
TCCATCTAAATTCACATGAA+GGG - chr3.3:9612149-9612168 None:intergenic 30.0%
TCTAAATTCACAGAACATGA+GGG + chr3.3:9612640-9612659 MS.gene046194:intron 30.0%
TGAGTTCCTTTCTTATGAAT+CGG - chr3.3:9611113-9611132 None:intergenic 30.0%
TGCTTATTATAAACACGTTC+GGG + chr3.3:9613093-9613112 MS.gene046194:CDS 30.0%
TGTATTGTGTTCTATGTTTC+AGG + chr3.3:9614594-9614613 MS.gene046194:intron 30.0%
TTCAATATATATTCTCCACG+TGG - chr3.3:9611848-9611867 None:intergenic 30.0%
TTCCATCTAAATTCACATGA+AGG - chr3.3:9612150-9612169 None:intergenic 30.0%
! AACGTTGTTGTCGTTTAAAA+AGG - chr3.3:9613869-9613888 None:intergenic 30.0%
! AAGGTTCAACATTTTGTTCA+CGG - chr3.3:9613850-9613869 None:intergenic 30.0%
! ATGGATTCAAGGTTTTACAA+TGG + chr3.3:9610494-9610513 MS.gene046194:CDS 30.0%
! ATTGATGGTTGTATGTATGT+AGG + chr3.3:9610468-9610487 MS.gene046194:CDS 30.0%
! CCTAATGGTGATTTTTATGA+TGG + chr3.3:9610675-9610694 MS.gene046194:CDS 30.0%
! CTTGTTATATGCATGGTAAA+GGG + chr3.3:9610571-9610590 MS.gene046194:CDS 30.0%
! GAAAAACCGATTCATAAGAA+AGG + chr3.3:9611104-9611123 MS.gene046194:CDS 30.0%
! TCTGATGGTAGTTTTTATGT+CGG + chr3.3:9610882-9610901 MS.gene046194:CDS 30.0%
! TGATTGAAAATATACCGACT+AGG - chr3.3:9614424-9614443 None:intergenic 30.0%
! TGGATTCAAGGTTTTACAAT+GGG + chr3.3:9610495-9610514 MS.gene046194:CDS 30.0%
! TTTTACTTCTGCTTTCTTCA+TGG - chr3.3:9612836-9612855 None:intergenic 30.0%
!! ACTATGTTTGGTTTCACTTT+TGG - chr3.3:9611756-9611775 None:intergenic 30.0%
!! ACTTGTTATATGCATGGTAA+AGG + chr3.3:9610570-9610589 MS.gene046194:CDS 30.0%
!! TTCAAGACTTGTTATATGCA+TGG + chr3.3:9610564-9610583 MS.gene046194:CDS 30.0%
!!! CTGTTAGTTTTACACAATGA+AGG - chr3.3:9613153-9613172 None:intergenic 30.0%
!!! TCATGGTTTTGATCATATAC+CGG - chr3.3:9612819-9612838 None:intergenic 30.0%
!!! TTCATTTTAAGTTGCGAACA+CGG + chr3.3:9612368-9612387 MS.gene046194:intron 30.0%
AAGAAAGGAACTCATGGTAA+TGG + chr3.3:9611119-9611138 MS.gene046194:CDS 35.0%
AAGGTAAGTTAAATGACCTC+TGG - chr3.3:9613809-9613828 None:intergenic 35.0%
AATCAGCAACTGCAAAGAAA+AGG + chr3.3:9610262-9610281 MS.gene046194:CDS 35.0%
AATGGTTCGTTTAATGGGAA+TGG + chr3.3:9610777-9610796 MS.gene046194:CDS 35.0%
ACCATTATATTGGTCAATGG+AGG + chr3.3:9610754-9610773 MS.gene046194:CDS 35.0%
ACCCTTCATGTGAATTTAGA+TGG + chr3.3:9612145-9612164 MS.gene046194:CDS 35.0%
AGAAAGGAACTCATGGTAAT+GGG + chr3.3:9611120-9611139 MS.gene046194:CDS 35.0%
AGCGAGAATCTCTTTCTTAT+TGG - chr3.3:9611518-9611537 None:intergenic 35.0%
AGTGGTACTTATTATCCATC+TGG + chr3.3:9610933-9610952 MS.gene046194:CDS 35.0%
ATAAAAGCTCCTAAAAGACC+AGG + chr3.3:9611269-9611288 MS.gene046194:CDS 35.0%
ATCAGCAACTGCAAAGAAAA+GGG + chr3.3:9610263-9610282 MS.gene046194:CDS 35.0%
ATCTCATCATAGATCCTAGT+CGG + chr3.3:9614407-9614426 MS.gene046194:CDS 35.0%
ATGGTCAAGGTAAGTATCTT+TGG + chr3.3:9610445-9610464 MS.gene046194:CDS 35.0%
ATTGTGTTCTATGTTTCAGG+TGG + chr3.3:9614597-9614616 MS.gene046194:intron 35.0%
CAAAATGGGAATAGGTATGA+TGG + chr3.3:9610813-9610832 MS.gene046194:CDS 35.0%
CAATTCAATATCTTGTCCGA+AGG - chr3.3:9611056-9611075 None:intergenic 35.0%
CACTCAGAAACAATAAGAGA+AGG - chr3.3:9611789-9611808 None:intergenic 35.0%
CATGATTCATTCACCTAGTT+AGG - chr3.3:9612250-9612269 None:intergenic 35.0%
CATGGTAAAGGGACTTATAT+AGG + chr3.3:9610582-9610601 MS.gene046194:CDS 35.0%
CCTGTGTAAAAATCACCATT+AGG - chr3.3:9610402-9610421 None:intergenic 35.0%
CGAACGTGTTTATAATAAGC+AGG - chr3.3:9613094-9613113 None:intergenic 35.0%
CTAGTCCAAACTTTCTCTTT+GGG - chr3.3:9612090-9612109 None:intergenic 35.0%
CTCAATATGTCATCCATAGA+CGG + chr3.3:9613308-9613327 MS.gene046194:CDS 35.0%
CTTATGTTGAATCTGCAACT+AGG + chr3.3:9611326-9611345 MS.gene046194:CDS 35.0%
CTTCGGACAAGATATTGAAT+TGG + chr3.3:9611054-9611073 MS.gene046194:CDS 35.0%
GAATAGGTATGATGGTTGTT+GGG + chr3.3:9610821-9610840 MS.gene046194:CDS 35.0%
GAGAAGTTAGAGGCTAAAAT+AGG + chr3.3:9612427-9612446 MS.gene046194:intron 35.0%
GGAACCATTATATTGGTCAA+TGG + chr3.3:9610751-9610770 MS.gene046194:CDS 35.0%
GGCATCATAGACATATTACA+AGG + chr3.3:9614740-9614759 MS.gene046194:CDS 35.0%
GGTAAGTATCTTTGGATTGA+TGG + chr3.3:9610453-9610472 MS.gene046194:CDS 35.0%
GGTAATGAGAGTTATCCTAA+TGG + chr3.3:9610660-9610679 MS.gene046194:CDS 35.0%
GGTAGGTATCAATGGAAAAA+TGG + chr3.3:9610729-9610748 MS.gene046194:CDS 35.0%
GTACAATGATGTGGCAAAAT+GGG + chr3.3:9610799-9610818 MS.gene046194:CDS 35.0%
GTCATCTTCATCATCTACAT+TGG - chr3.3:9610319-9610338 None:intergenic 35.0%
GTCTAAATTCACAGAACATG+AGG + chr3.3:9612639-9612658 MS.gene046194:intron 35.0%
GTTGAAAAGACTATGCCTAA+TGG + chr3.3:9610384-9610403 MS.gene046194:CDS 35.0%
GTTGTATGTATGTAGGTGAA+TGG + chr3.3:9610475-9610494 MS.gene046194:CDS 35.0%
TAGGAAAAACTGTATTAGGG+AGG - chr3.3:9614115-9614134 None:intergenic 35.0%
TAGTGATGCTCATCTTGAAT+GGG + chr3.3:9610959-9610978 MS.gene046194:CDS 35.0%
TATATTGGTCAATGGAGGAA+TGG + chr3.3:9610759-9610778 MS.gene046194:CDS 35.0%
TATGATGGTTGTTGGGAAAA+TGG + chr3.3:9610828-9610847 MS.gene046194:CDS 35.0%
TATGCATACCTGAATACTAC+CGG - chr3.3:9612183-9612202 None:intergenic 35.0%
TCATTGAATGCGAGCAAAAA+TGG - chr3.3:9614025-9614044 None:intergenic 35.0%
TCCTCCATTGACCAATATAA+TGG - chr3.3:9610758-9610777 None:intergenic 35.0%
TCTAGTCCAAACTTTCTCTT+TGG - chr3.3:9612091-9612110 None:intergenic 35.0%
TGCCGTGAAAATTAGAATCA+AGG - chr3.3:9611976-9611995 None:intergenic 35.0%
TTCAAATCAAGTGATGCACT+TGG - chr3.3:9612051-9612070 None:intergenic 35.0%
TTCTGTCATTCAACTAAGAG+AGG - chr3.3:9613653-9613672 None:intergenic 35.0%
TTGATCCCAAAGAGAAAGTT+TGG + chr3.3:9612082-9612101 MS.gene046194:CDS 35.0%
TTGTGATAGAGAGAAGTTAG+AGG + chr3.3:9612417-9612436 MS.gene046194:intron 35.0%
TTTGGACGGGAATTCATTAA+AGG - chr3.3:9613895-9613914 None:intergenic 35.0%
! AAGATCCTTAAGTGTTGTTG+TGG - chr3.3:9613395-9613414 None:intergenic 35.0%
! ACACCACACTTTACAAGTTT+TGG + chr3.3:9613527-9613546 MS.gene046194:intron 35.0%
! ACAGTTACCGAGTTTTCATT+AGG - chr3.3:9611875-9611894 None:intergenic 35.0%
! AGATCCTTAAGTGTTGTTGT+GGG - chr3.3:9613394-9613413 None:intergenic 35.0%
! ATGGATTACAGTATGTTGGT+TGG + chr3.3:9614262-9614281 MS.gene046194:CDS 35.0%
! ATGTATGATTTGTCCTTGTG+AGG + chr3.3:9611016-9611035 MS.gene046194:CDS 35.0%
! CAAATAGTCTCTTGCTGTAT+TGG + chr3.3:9612602-9612621 MS.gene046194:intron 35.0%
! CATCTTCAGAGTTTTTGTAG+AGG + chr3.3:9614871-9614890 MS.gene046194:CDS 35.0%
! CCTAATGGTGATTTTTACAC+AGG + chr3.3:9610399-9610418 MS.gene046194:CDS 35.0%
! GGATTCAAGGTTTTACAATG+GGG + chr3.3:9610496-9610515 MS.gene046194:CDS 35.0%
! GTGATTTTTACACAGGACAA+TGG + chr3.3:9610406-9610425 MS.gene046194:CDS 35.0%
! TATGATGGTGAGTGGAAAAA+GGG + chr3.3:9610690-9610709 MS.gene046194:CDS 35.0%
! TATGTAGGTGAATGGATTCA+AGG + chr3.3:9610483-9610502 MS.gene046194:CDS 35.0%
! TGTTTCAGGTGGATTCAATT+AGG + chr3.3:9614608-9614627 MS.gene046194:intron 35.0%
! TTATGATGGTGAGTGGAAAA+AGG + chr3.3:9610689-9610708 MS.gene046194:CDS 35.0%
!! ATGTTTGGTTTCACTTTTGG+AGG - chr3.3:9611753-9611772 None:intergenic 35.0%
!! GTAGTTTTTATGTCGGTGTT+TGG + chr3.3:9610889-9610908 MS.gene046194:CDS 35.0%
!! GTGATTTTTATGATGGTGAG+TGG + chr3.3:9610682-9610701 MS.gene046194:CDS 35.0%
!! TTCATGCAGACAAGTTGATA+GGG + chr3.3:9614210-9614229 MS.gene046194:intron 35.0%
!!! AAAAAGCTTCCACTTTTTCC+AGG - chr3.3:9612778-9612797 None:intergenic 35.0%
!!! ATTTTGTTCACGGTTTTGGA+CGG - chr3.3:9613909-9613928 None:intergenic 35.0%
!!! TCATTTTAAGTTGCGAACAC+GGG + chr3.3:9612369-9612388 MS.gene046194:intron 35.0%
AGATACTTACCTTGACCATG+TGG - chr3.3:9610444-9610463 None:intergenic 40.0%
ATATCATACATCTCTCCGGT+TGG - chr3.3:9614707-9614726 None:intergenic 40.0%
ATGGACATGGTAGGTATCAA+TGG + chr3.3:9610721-9610740 MS.gene046194:CDS 40.0%
ATGGGAATGGTACAATGATG+TGG + chr3.3:9610790-9610809 MS.gene046194:CDS 40.0%
CAATATCTTGTCCGAAGGAT+AGG - chr3.3:9611051-9611070 None:intergenic 40.0%
CACAAAAGAAGGTAATGCCT+AGG + chr3.3:9613179-9613198 MS.gene046194:intron 40.0%
CCAACGGAATGTCTGTAAAA+TGG - chr3.3:9612018-9612037 None:intergenic 40.0%
CCAGGAGAGACTATATCTAA+AGG + chr3.3:9611287-9611306 MS.gene046194:CDS 40.0%
CCTTTAGATATAGTCTCTCC+TGG - chr3.3:9611290-9611309 None:intergenic 40.0%
CCTTTATCTTCCTCTAAACC+CGG - chr3.3:9611080-9611099 None:intergenic 40.0%
CTAAACGTACCATTCCCTTT+CGG - chr3.3:9610858-9610877 None:intergenic 40.0%
CTAAATTCACATGAAGGGTG+AGG - chr3.3:9612144-9612163 None:intergenic 40.0%
CTACAGGCACGTATAAATAG+TGG - chr3.3:9613499-9613518 None:intergenic 40.0%
CTAGTGATGCTCATCTTGAA+TGG + chr3.3:9610958-9610977 MS.gene046194:CDS 40.0%
CTCCATCATCGAATTCAGAT+GGG - chr3.3:9614357-9614376 None:intergenic 40.0%
GACAAGATATTGAATTGGCC+GGG + chr3.3:9611059-9611078 MS.gene046194:CDS 40.0%
GATAAGTTTCCACATGGTCA+AGG + chr3.3:9610432-9610451 MS.gene046194:CDS 40.0%
GGAATAGGTATGATGGTTGT+TGG + chr3.3:9610820-9610839 MS.gene046194:CDS 40.0%
GGACAAGATATTGAATTGGC+CGG + chr3.3:9611058-9611077 MS.gene046194:CDS 40.0%
GGAGGAATGGTTCGTTTAAT+GGG + chr3.3:9610772-9610791 MS.gene046194:CDS 40.0%
GGGACTTATATAGGTTCATC+TGG + chr3.3:9610591-9610610 MS.gene046194:CDS 40.0%
GGTACAATGATGTGGCAAAA+TGG + chr3.3:9610798-9610817 MS.gene046194:CDS 40.0%
GGTAGTATTCAGGTATGCAT+AGG + chr3.3:9612182-9612201 MS.gene046194:intron 40.0%
GTCGATTGTAACTTGAGAGT+AGG + chr3.3:9613613-9613632 MS.gene046194:intron 40.0%
GTTCCAAAGTAAAGCCAAAG+TGG - chr3.3:9613995-9614014 None:intergenic 40.0%
TAGATGGAAAGACTACTGTC+CGG + chr3.3:9612161-9612180 MS.gene046194:CDS 40.0%
TATGTGGGAATGAAGCTCTT+CGG + chr3.3:9612740-9612759 MS.gene046194:CDS 40.0%
TATTTCGGTTGCAGAAGTCT+TGG + chr3.3:9613428-9613447 MS.gene046194:CDS 40.0%
TCAACAGTGAAAACCTCTTG+AGG - chr3.3:9610987-9611006 None:intergenic 40.0%
TCCATCATCGAATTCAGATG+GGG - chr3.3:9614356-9614375 None:intergenic 40.0%
TCTATTTGACGAACGATGAC+CGG + chr3.3:9612797-9612816 MS.gene046194:CDS 40.0%
TGAATCTGCAACTAGGTATC+AGG + chr3.3:9611333-9611352 MS.gene046194:CDS 40.0%
TGATGTGGCAAAATGGGAAT+AGG + chr3.3:9610805-9610824 MS.gene046194:CDS 40.0%
TGGAGGAATGGTTCGTTTAA+TGG + chr3.3:9610771-9610790 MS.gene046194:CDS 40.0%
TGGCTTGATAAGTTTCCACA+TGG + chr3.3:9610426-9610445 MS.gene046194:CDS 40.0%
! AACAGGAAGTGCACAAAAGA+AGG + chr3.3:9613168-9613187 MS.gene046194:CDS 40.0%
! CAAGGTTTTACAATGGGGAA+GGG + chr3.3:9610501-9610520 MS.gene046194:CDS 40.0%
! CCATTTTACAGACATTCCGT+TGG + chr3.3:9612015-9612034 MS.gene046194:intron 40.0%
! CTTAGTAATCACAGCTCTGA+AGG + chr3.3:9611173-9611192 MS.gene046194:CDS 40.0%
! CTTTCAAGTCAAACCGTCTA+TGG - chr3.3:9613324-9613343 None:intergenic 40.0%
! GCAATTTTGCAGCTCATACA+AGG - chr3.3:9613703-9613722 None:intergenic 40.0%
! TCAAGGTTTTACAATGGGGA+AGG + chr3.3:9610500-9610519 MS.gene046194:CDS 40.0%
! TCTACATTGGCTACAGACAT+TGG - chr3.3:9610306-9610325 None:intergenic 40.0%
! TGGAAAAAGGGTGTGCAAAA+TGG + chr3.3:9610702-9610721 MS.gene046194:CDS 40.0%
!! ATAGTCTCTCCTGGTCTTTT+AGG - chr3.3:9611281-9611300 None:intergenic 40.0%
!! CATAGACGGTTTGACTTGAA+AGG + chr3.3:9613322-9613341 MS.gene046194:CDS 40.0%
!! CTTGGTTCGAAGAATTTTGC+AGG + chr3.3:9613446-9613465 MS.gene046194:CDS 40.0%
!! GCAAAGTTTTGGTCCTAACT+AGG + chr3.3:9612234-9612253 MS.gene046194:intron 40.0%
!! GGTCATTTTGTTCACGGTTT+TGG - chr3.3:9613913-9613932 None:intergenic 40.0%
!! TTTCCTAACTGTTGATTCCC+AGG - chr3.3:9610244-9610263 None:intergenic 40.0%
!! TTTGAACTTTGGTGCCACTT+TGG + chr3.3:9613978-9613997 MS.gene046194:intron 40.0%
!! TTTGGTTTCACTTTTGGAGG+AGG - chr3.3:9611750-9611769 None:intergenic 40.0%
!!! CATTTTAAGTTGCGAACACG+GGG + chr3.3:9612370-9612389 MS.gene046194:intron 40.0%
!!! TTTTGTTCACGGTTTTGGAC+GGG - chr3.3:9613908-9613927 None:intergenic 40.0%
AAAGCTGGAATAAATCGCCG+CGG + chr3.3:9611240-9611259 MS.gene046194:CDS 45.0%
AAGCCTGGGAATCAACAGTT+AGG + chr3.3:9610238-9610257 MS.gene046194:CDS 45.0%
AAGGGAATGGTACGTTTAGG+TGG + chr3.3:9610859-9610878 MS.gene046194:CDS 45.0%
AATAGGGAAAACTGCACCAG+AGG + chr3.3:9613790-9613809 MS.gene046194:intron 45.0%
AATTCACATGAAGGGTGAGG+TGG - chr3.3:9612141-9612160 None:intergenic 45.0%
ACCCCATCTGAATTCGATGA+TGG + chr3.3:9614352-9614371 MS.gene046194:CDS 45.0%
ACTACTGTCCGGTAGTATTC+AGG + chr3.3:9612172-9612191 MS.gene046194:CDS 45.0%
AGAGCCCACAACAACACTTA+AGG + chr3.3:9613387-9613406 MS.gene046194:CDS 45.0%
ATGTGGGAATGAAGCTCTTC+GGG + chr3.3:9612741-9612760 MS.gene046194:CDS 45.0%
ATTGAATTGGCCGGGTTTAG+AGG + chr3.3:9611067-9611086 MS.gene046194:CDS 45.0%
CAATATCAACCATGCACACG+AGG - chr3.3:9612558-9612577 None:intergenic 45.0%
CACATGTGAAAGTCCTCAGT+TGG + chr3.3:9614673-9614692 MS.gene046194:CDS 45.0%
CACTTTCGAGATACAAGTCC+TGG + chr3.3:9614289-9614308 MS.gene046194:CDS 45.0%
CAGGTTCGCTTTGTCATCAT+GGG + chr3.3:9613271-9613290 MS.gene046194:intron 45.0%
CCGGGTTTAGAGGAAGATAA+AGG + chr3.3:9611077-9611096 MS.gene046194:CDS 45.0%
CCTCAGGTTTATCAGTAGTG+CGG - chr3.3:9613360-9613379 None:intergenic 45.0%
CCTCCATCATCGAATTCAGA+TGG - chr3.3:9614358-9614377 None:intergenic 45.0%
CCTTCATATGTAGCACCACT+AGG - chr3.3:9610540-9610559 None:intergenic 45.0%
CGAAAGGGAATGGTACGTTT+AGG + chr3.3:9610856-9610875 MS.gene046194:CDS 45.0%
CTCTCATCTCCTGGAAAAAG+TGG + chr3.3:9612766-9612785 MS.gene046194:CDS 45.0%
GAATGGCATTGTCAAAGCCT+GGG + chr3.3:9610224-9610243 MS.gene046194:CDS 45.0%
GACTTGAAAGGTTCGACGTT+TGG + chr3.3:9613334-9613353 MS.gene046194:CDS 45.0%
GAGGCAATTCTGTTCAAAGC+TGG + chr3.3:9611225-9611244 MS.gene046194:CDS 45.0%
GGACATTACGACCTATCCTT+CGG + chr3.3:9611037-9611056 MS.gene046194:CDS 45.0%
GGGGTTGCACGATAAATTAG+AGG + chr3.3:9611590-9611609 MS.gene046194:intron 45.0%
GTGTGCAAAATGGACATGGT+AGG + chr3.3:9610712-9610731 MS.gene046194:CDS 45.0%
TAGGTCGTAATGTCCTCACA+AGG - chr3.3:9611032-9611051 None:intergenic 45.0%
TATACGTGCCTGTAGCATGT+AGG + chr3.3:9613504-9613523 MS.gene046194:intron 45.0%
TCAACGGCTGAGATTGAAGT+TGG - chr3.3:9614818-9614837 None:intergenic 45.0%
TCAGGTTCGCTTTGTCATCA+TGG + chr3.3:9613270-9613289 MS.gene046194:intron 45.0%
TCTTGAATGGGATCCTCAAG+AGG + chr3.3:9610971-9610990 MS.gene046194:CDS 45.0%
TGAATGGCATTGTCAAAGCC+TGG + chr3.3:9610223-9610242 MS.gene046194:CDS 45.0%
TGAGCATCACTAGAACCAGA+TGG - chr3.3:9610951-9610970 None:intergenic 45.0%
TGTGAAAGTCCTCAGTTGGT+TGG + chr3.3:9614677-9614696 MS.gene046194:CDS 45.0%
TTTAACCTGTAAAGCCCACG+TGG + chr3.3:9611830-9611849 MS.gene046194:intron 45.0%
TTTCGAGATACAAGTCCTGG+CGG + chr3.3:9614292-9614311 MS.gene046194:CDS 45.0%
! AAGCGTTTCGAGTATAGCCT+TGG - chr3.3:9614842-9614861 None:intergenic 45.0%
! AAGGGTGTGCAAAATGGACA+TGG + chr3.3:9610708-9610727 MS.gene046194:CDS 45.0%
! AATGGTTTGCCGAAAGGGAA+TGG + chr3.3:9610846-9610865 MS.gene046194:CDS 45.0%
! CCATCTGAATTCGATGATGG+AGG + chr3.3:9614355-9614374 MS.gene046194:CDS 45.0%
! CGAGTATAGCCTTGGATCAA+CGG - chr3.3:9614834-9614853 None:intergenic 45.0%
! GCTTTTCCGCAAAGCCATTT+CGG - chr3.3:9614654-9614673 None:intergenic 45.0%
! GGAGCTTTTATTCTCAACCG+CGG - chr3.3:9611260-9611279 None:intergenic 45.0%
! GGGAAAATGGTTTGCCGAAA+GGG + chr3.3:9610841-9610860 MS.gene046194:CDS 45.0%
! GTTTTACAATGGGGAAGGGT+AGG + chr3.3:9610505-9610524 MS.gene046194:CDS 45.0%
! TCTGCATTTGATGAGTTGGG+AGG + chr3.3:9611206-9611225 MS.gene046194:CDS 45.0%
! TGGACTAGATTTCCACCAGA+AGG + chr3.3:9612102-9612121 MS.gene046194:CDS 45.0%
! TGGGAAAATGGTTTGCCGAA+AGG + chr3.3:9610840-9610859 MS.gene046194:CDS 45.0%
!! AGTAATCACAGCTCTGAAGG+AGG + chr3.3:9611176-9611195 MS.gene046194:CDS 45.0%
!! ATGGTAATGGGAAGCCTAGA+CGG + chr3.3:9611132-9611151 MS.gene046194:CDS 45.0%
!! CCTAGTGGTGCTACATATGA+AGG + chr3.3:9610537-9610556 MS.gene046194:CDS 45.0%
!! GTGCCACTTTGGCTTTACTT+TGG + chr3.3:9613989-9614008 MS.gene046194:intron 45.0%
ACGCTGGTCACGAAGTTCTT+CGG + chr3.3:9613127-9613146 MS.gene046194:CDS 50.0%
ACTTGGAGCAGGTCTTCCAA+CGG - chr3.3:9612034-9612053 None:intergenic 50.0%
ATTCTCCACGTGGGCTTTAC+AGG - chr3.3:9611838-9611857 None:intergenic 50.0%
CAATCTCAGCCGTTGATCCA+AGG + chr3.3:9614822-9614841 MS.gene046194:CDS 50.0%
CCGCACTACTGATAAACCTG+AGG + chr3.3:9613357-9613376 MS.gene046194:CDS 50.0%
CTGCATCCACTCCTGAAAGA+CGG - chr3.3:9614384-9614403 None:intergenic 50.0%
GGTACGTTTAGGTGGTCTGA+TGG + chr3.3:9610867-9610886 MS.gene046194:CDS 50.0%
GTATGCTTGGATCCTTCTGG+TGG - chr3.3:9612117-9612136 None:intergenic 50.0%
GTCGTCATCGTCTTCACAAG+AGG + chr3.3:9610353-9610372 MS.gene046194:CDS 50.0%
TCAAGTGATGCACTTGGAGC+AGG - chr3.3:9612045-9612064 None:intergenic 50.0%
TGCATCCACTCCTGAAAGAC+GGG - chr3.3:9614383-9614402 None:intergenic 50.0%
TGGGGAAGGGTAGGTTTAGT+TGG + chr3.3:9610514-9610533 MS.gene046194:CDS 50.0%
TGTGGTGTCCTACATGCTAC+AGG - chr3.3:9613515-9613534 None:intergenic 50.0%
! GGTAGGTTTAGTTGGCCTAG+TGG + chr3.3:9610522-9610541 MS.gene046194:CDS 50.0%
! TTTTCGAAGCCTCGTGTGCA+TGG + chr3.3:9612546-9612565 MS.gene046194:intron 50.0%
!! TCGGGCTTTTGAGAATACGC+TGG + chr3.3:9613111-9613130 MS.gene046194:CDS 50.0%
CAAGGTGTAACATTGCCGCC+AGG - chr3.3:9614310-9614329 None:intergenic 55.0%
CAGTTGGTTGGCGAACCAAC+CGG + chr3.3:9614689-9614708 MS.gene046194:CDS 55.0%
CATCCACTCCTGAAAGACGG+GGG - chr3.3:9614381-9614400 None:intergenic 55.0%
CCATCAGCAGAACTCCGTCT+AGG - chr3.3:9611149-9611168 None:intergenic 55.0%
CCTAGACGGAGTTCTGCTGA+TGG + chr3.3:9611146-9611165 MS.gene046194:CDS 55.0%
CTTCGGGAACTCTCATCTCC+TGG + chr3.3:9612757-9612776 MS.gene046194:CDS 55.0%
GACGGAGTTCTGCTGATGGA+AGG + chr3.3:9611150-9611169 MS.gene046194:CDS 55.0%
GCATCCACTCCTGAAAGACG+GGG - chr3.3:9614382-9614401 None:intergenic 55.0%
GGCGGCAATGTTACACCTTG+CGG + chr3.3:9614310-9614329 MS.gene046194:CDS 55.0%
GGCGTATGCTTGGATCCTTC+TGG - chr3.3:9612120-9612139 None:intergenic 55.0%
GTTGCGAACACGGGGATGAA+AGG + chr3.3:9612378-9612397 MS.gene046194:intron 55.0%
TACACCTTGCGGTCGCAGTT+CGG + chr3.3:9614321-9614340 MS.gene046194:CDS 55.0%
!! GTTGGTTCGCCAACCAACTG+AGG - chr3.3:9614689-9614708 None:intergenic 55.0%
ACACCTTGCGGTCGCAGTTC+GGG + chr3.3:9614322-9614341 MS.gene046194:CDS 60.0%
AGGGTGAGGTGGCGTATGCT+TGG - chr3.3:9612130-9612149 None:intergenic 60.0%
GTGGGCTCTACTTCTGCCTC+AGG - chr3.3:9613376-9613395 None:intergenic 60.0%
! AAAGCCATTTCGGCTCGCGC+TGG - chr3.3:9614644-9614663 None:intergenic 60.0%
! CGCGAGCCGAAATGGCTTTG+CGG + chr3.3:9614645-9614664 MS.gene046194:CDS 60.0%
AGGCCCCCGTCTTTCAGGAG+TGG + chr3.3:9614375-9614394 MS.gene046194:CDS 65.0%
CATGCCAGCGCGAGCCGAAA+TGG + chr3.3:9614637-9614656 MS.gene046194:CDS 65.0%
GATGGAGGCCCCCGTCTTTC+AGG + chr3.3:9614370-9614389 MS.gene046194:CDS 65.0%
GCTCCCGAACTGCGACCGCA+AGG - chr3.3:9614328-9614347 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 9610210 9614901 9610210 ID=MS.gene046194
chr3.3 mRNA 9610210 9614901 9610210 ID=MS.gene046194.t1;Parent=MS.gene046194
chr3.3 exon 9610210 9611354 9610210 ID=MS.gene046194.t1.exon1;Parent=MS.gene046194.t1
chr3.3 CDS 9610210 9611354 9610210 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
chr3.3 exon 9612026 9612193 9612026 ID=MS.gene046194.t1.exon2;Parent=MS.gene046194.t1
chr3.3 CDS 9612026 9612193 9612026 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
chr3.3 exon 9612690 9612855 9612690 ID=MS.gene046194.t1.exon3;Parent=MS.gene046194.t1
chr3.3 CDS 9612690 9612855 9612690 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
chr3.3 exon 9613073 9613189 9613073 ID=MS.gene046194.t1.exon4;Parent=MS.gene046194.t1
chr3.3 CDS 9613073 9613189 9613073 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
chr3.3 exon 9613274 9613467 9613274 ID=MS.gene046194.t1.exon5;Parent=MS.gene046194.t1
chr3.3 CDS 9613274 9613467 9613274 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
chr3.3 exon 9614219 9614428 9614219 ID=MS.gene046194.t1.exon6;Parent=MS.gene046194.t1
chr3.3 CDS 9614219 9614428 9614219 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
chr3.3 exon 9614616 9614901 9614616 ID=MS.gene046194.t1.exon7;Parent=MS.gene046194.t1
chr3.3 CDS 9614616 9614901 9614616 ID=cds.MS.gene046194.t1;Parent=MS.gene046194.t1
Gene Sequence

>MS.gene046194

ATGAGCAGGGAGCTGAATGGCATTGTCAAAGCCTGGGAATCAACAGTTAGGAAATCAGCAACTGCAAAGAAAAGGGCAAACAGCATTTTCAAACCAATGTCTGTAGCCAATGTAGATGATGAAGATGACGACGACAAACAATCGTCGTCATCGTCTTCACAAGAGGTAAGTCATGTTGAAAAGACTATGCCTAATGGTGATTTTTACACAGGACAATGGCTTGATAAGTTTCCACATGGTCAAGGTAAGTATCTTTGGATTGATGGTTGTATGTATGTAGGTGAATGGATTCAAGGTTTTACAATGGGGAAGGGTAGGTTTAGTTGGCCTAGTGGTGCTACATATGAAGGTGAATTCAAGACTTGTTATATGCATGGTAAAGGGACTTATATAGGTTCATCTGGTGATACTTATAAAGGGAATTGGGTTATGAATTTGAAAAATGGGGATGGTAATGAGAGTTATCCTAATGGTGATTTTTATGATGGTGAGTGGAAAAAGGGTGTGCAAAATGGACATGGTAGGTATCAATGGAAAAATGGGAACCATTATATTGGTCAATGGAGGAATGGTTCGTTTAATGGGAATGGTACAATGATGTGGCAAAATGGGAATAGGTATGATGGTTGTTGGGAAAATGGTTTGCCGAAAGGGAATGGTACGTTTAGGTGGTCTGATGGTAGTTTTTATGTCGGTGTTTGGAGTAAAGATCCTAAAGAACAAAGTGGTACTTATTATCCATCTGGTTCTAGTGATGCTCATCTTGAATGGGATCCTCAAGAGGTTTTCACTGTTGAGTTGATTGAATGTATGATTTGTCCTTGTGAGGACATTACGACCTATCCTTCGGACAAGATATTGAATTGGCCGGGTTTAGAGGAAGATAAAGGAACAGAAAAACCGATTCATAAGAAAGGAACTCATGGTAATGGGAAGCCTAGACGGAGTTCTGCTGATGGAAGGCTTAGTAATCACAGCTCTGAAGGAGGTAGAAAATCTGCATTTGATGAGTTGGGAGGCAATTCTGTTCAAAGCTGGAATAAATCGCCGCGGTTGAGAATAAAAGCTCCTAAAAGACCAGGAGAGACTATATCTAAAGGACATAAAAACTATGAGCTTATGTTGAATCTGCAACTAGGTATCAGGTATTCTGATCAGAAAAATTGTTGTTGTTTTCATGTATTTTGTTTACTCTCATATCATCTTTATGGTGTCGCTGAGCTTAATTATTGTGTGTTTGGTTCTGCAATAATAGAAATTGATTTTTAATGAACTGATTTTGTAATAGAGATTCTTGCTATTGCACCAATAAGAAAGAGATTCTCGCTAAAAGTGAGTTGAATGTTAAGTGATTTATGTCTGAATACATTTATATAAAAAGGGGTTGCACGATAAATTAGAGGCTAAAAATCAATTGTAGAGGCAAAAACTTCAAATTCTAGCTTAAATTAGAATCAAGTCTGGAGGCCAAATCAATTTCGTTCGATAATATCAAAACATATCAAAATCAATTCCACAACTTTTGGAATCAATTTTTCCTCCTCCAAAAGTGAAACCAAACATAGTCTTTTTTTTTCCTTCTCTTATTGTTTCTGAGTGATACTTGTATTGTACTAGTATTTTAACCTGTAAAGCCCACGTGGAGAATATATATTGAAATTTCCTAATGAAAACTCGGTAACTGTTGTAATTTGATAACATTAACATTGATAGCTATAAATGGTGCAATGATGAATTTCACATTGTAGCAAATAATTTTCCTTCCTTGATTCTAATTTTCACGGCACATTTACTAATTTCTTGTACCATTTTACAGACATTCCGTTGGAAGACCTGCTCCAAGTGCATCACTTGATTTGAAGTCTTCTGCATTTGATCCCAAAGAGAAAGTTTGGACTAGATTTCCACCAGAAGGATCCAAGCATACGCCACCTCACCCTTCATGTGAATTTAGATGGAAAGACTACTGTCCGGTAGTATTCAGGTATGCATAGGATTGAATGATCAGTTTTCTATTTATGTAAGCAAAGTTTTGGTCCTAACTAGGTGAATGAATCATGTTCTGTAACATAATCTACTAAGTGTTTACTTGTTGAGAGTAACTCTTGAAGTTCATGTTCAAAAAGTATTTTTCAATTTTCGTGTTCTAAAATTTGTGTTCATTTTAAGTTGCGAACACGGGGATGAAAGGCTGAAGTAGTGAACAATTGTGATAGAGAGAAGTTAGAGGCTAAAATAGGCAGAATGCATTTTCAGAAACAACGAAAACAATGTTTTAGTATTTTCGAAATTTCTAAAAAATCTAGATCTGTTTTCAGAAATTGTAAAAGAAACATTTTTCGAAGCCTCGTGTGCATGGTTGATATTGCAATTGTTTCATAACCTAGTATTACAAATAGTCTCTTGCTGTATTGGAATTTCATTTGTTTGTCTAAATTCACAGAACATGAGGGTGTATTTGATTGCATTTATAATTTCAGGGCTCTCAGAAAGCTGTTCAAAGTTGATCCTGCTGATTACATGATATCAATATGTGGGAATGAAGCTCTTCGGGAACTCTCATCTCCTGGAAAAAGTGGAAGCTTTTTCTATTTGACGAACGATGACCGGTATATGATCAAAACCATGAAGAAAGCAGAAGTAAAAGTGAGTTTCATTTTCATTGGCTAGATATAATATAAGCCTTCTTTTATCAATTCTCTCAACCCTTCACTTTATAACGAAAATTACAATAGATTTAAACATTTAAAAGTTTGTCACAAATATGTATTAGTCCACTTTGATGTGATATTTTCTCATGATGCTTGCATTGCATTAATCTACTGAATCATATTTCAATCCAAAAAATATTACATGATTGCAGGTTTTTCTGAAAATGCTTCCTGCTTATTATAAACACGTTCGGGCTTTTGAGAATACGCTGGTCACGAAGTTCTTCGGCCTTCATTGTGTAAAACTAACAGGAAGTGCACAAAAGAAGGTAATGCCTAGGTGTTTATAAACTTTTACTTTGGTATAAAAATAAAACTTTTATTCTTAATCAATTGCATTTCATAAATTTCAGGTTCGCTTTGTCATCATGGGAAATATATTTTGTTCTCAATATGTCATCCATAGACGGTTTGACTTGAAAGGTTCGACGTTTGGCCGCACTACTGATAAACCTGAGGCAGAAGTAGAGCCCACAACAACACTTAAGGATCTTGACTTAAATTTTATATTTCGGTTGCAGAAGTCTTGGTTCGAAGAATTTTGCAGGTGAATTTCTTGCTTAGTGCTTGTTCTGCCACTATTTATACGTGCCTGTAGCATGTAGGACACCACACTTTACAAGTTTTGGTTTTATTAAACATATTATTAGCTTCTTGGGACAAAAAGTTTGTTTTGAAGTTATTGATGGAAAGTCGATTGTAACTTGAGAGTAGGTGTATTACTAGTTACCTCTCTTAGTTGAATGACAGAAATGCAGATTTCACTAAAAAAGTTGCATCCTTGTATGAGCTGCAAAATTGCCTGCAATTTTTAGTCATATGATTAATGAACGAAAAATGACTTATGTGTCTTGATATTTAACATAAGAAATAGGGAAAACTGCACCAGAGGTCATTTAACTTACCTTAAAGTTTCAACTTTCAAACCGTGAACAAAATGTTGAACCTTTTTAAACGACAACAACGTTGAACCTTTAATGAATTCCCGTCCAAAACCGTGAACAAAATGACCTTATTTTAGCCTTCTTTTGAAATGTAATTTATTATTGTCTTTACTTTTGAACTTTGGTGCCACTTTGGCTTTACTTTGGAACTTCAGTGCCATTTTTGCTCGCATTCAATGAATGAATGAAAGGTTTCACTATAAAAAGATAAAGAACCTGTTTGAAACTTTATATATAAGTTAGAAGGCCTCCCTAATACAGTTTTTCCTATCAAATATTTGTAATTTAGTTGATCATATTTCTTTTTTCTTTTTTTTTGACGTCGGAGATATTTCTAAACATGCCTTCATGCAGACAAGTTGATAGGGACTGTGACTTTCTTCAACATGAAAGAATTATGGATTACAGTATGTTGGTTGGTCTTCACTTTCGAGATACAAGTCCTGGCGGCAATGTTACACCTTGCGGTCGCAGTTCGGGAGCTCGCACCCCATCTGAATTCGATGATGGAGGCCCCCGTCTTTCAGGAGTGGATGCAGATCATCTCATCATAGATCCTAGTCGGTATATTTTCAATCAACTCATCTTTGCAGTTTCAATTATTTTTTAGAACTTTAGTTTTCACTGTTTACACATGAATCCAATTAGACCAAACATTAAATATTTTCTGTTATTGAACTATTTCACTTTTACATTGTTTGATTCTCATTCATTTTCTGATTCATTTTTTGTATTGTGTTCTATGTTTCAGGTGGATTCAATTAGGTATAAACATGCCAGCGCGAGCCGAAATGGCTTTGCGGAAAAGCACATGTGAAAGTCCTCAGTTGGTTGGCGAACCAACCGGAGAGATGTATGATATTATCATCTTTTTTGGCATCATAGACATATTACAAGGCTATGATATTAGTAAAAAGCTTGAGCATGCTTACAAATCAATGCAATACGATCCAACTTCAATCTCAGCCGTTGATCCAAGGCTATACTCGAAACGCTTTCGCGATTTCATCTTCAGAGTTTTTGTAGAGGACACTTAA
Protein sequence

>MS.gene046194.t1

MSRELNGIVKAWESTVRKSATAKKRANSIFKPMSVANVDDEDDDDKQSSSSSSQEVSHVEKTMPNGDFYTGQWLDKFPHGQGKYLWIDGCMYVGEWIQGFTMGKGRFSWPSGATYEGEFKTCYMHGKGTYIGSSGDTYKGNWVMNLKNGDGNESYPNGDFYDGEWKKGVQNGHGRYQWKNGNHYIGQWRNGSFNGNGTMMWQNGNRYDGCWENGLPKGNGTFRWSDGSFYVGVWSKDPKEQSGTYYPSGSSDAHLEWDPQEVFTVELIECMICPCEDITTYPSDKILNWPGLEEDKGTEKPIHKKGTHGNGKPRRSSADGRLSNHSSEGGRKSAFDELGGNSVQSWNKSPRLRIKAPKRPGETISKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKSSAFDPKEKVWTRFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISICGNEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVFLKMLPAYYKHVRAFENTLVTKFFGLHCVKLTGSAQKKVRFVIMGNIFCSQYVIHRRFDLKGSTFGRTTDKPEAEVEPTTTLKDLDLNFIFRLQKSWFEEFCRQVDRDCDFLQHERIMDYSMLVGLHFRDTSPGGNVTPCGRSSGARTPSEFDDGGPRLSGVDADHLIIDPSRWIQLGINMPARAEMALRKSTCESPQLVGEPTGEMYDIIIFFGIIDILQGYDISKKLEHAYKSMQYDPTSISAVDPRLYSKRFRDFIFRVFVEDT