AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65733

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65733.t1 MTR_3g014650 96.715 761 13 1 1 761 26 774 0.0 1533
MS.gene65733.t1 MTR_8g039100 75.489 767 166 7 1 761 1 751 0.0 1170
MS.gene65733.t1 MTR_1g050740 63.614 797 224 16 8 761 8 781 0.0 1010
MS.gene65733.t1 MTR_7g089950 58.467 809 259 16 7 761 7 792 0.0 927
MS.gene65733.t1 MTR_3g073100 53.472 720 277 15 59 760 52 731 0.0 709
MS.gene65733.t1 MTR_3g097260 52.168 715 269 9 59 760 50 704 0.0 703
MS.gene65733.t1 MTR_1g062740 43.511 786 339 17 60 757 47 815 0.0 612
MS.gene65733.t1 MTR_5g459450 62.740 416 139 6 358 760 320 732 6.00e-176 524
MS.gene65733.t1 MTR_5g459450 58.480 171 71 0 57 227 62 232 9.11e-64 228
MS.gene65733.t1 MTR_5g459450 32.258 124 84 0 134 257 70 193 1.25e-15 81.6
MS.gene65733.t1 MTR_5g459450 44.318 88 49 0 156 243 69 156 3.61e-14 77.0
MS.gene65733.t1 MTR_8g095170 59.012 405 147 6 358 760 279 666 2.34e-162 485
MS.gene65733.t1 MTR_8g095170 55.030 169 75 1 62 229 28 196 2.65e-56 204
MS.gene65733.t1 MTR_8g095170 36.508 126 79 1 110 234 30 155 2.49e-15 80.5
MS.gene65733.t1 MTR_8g095170 32.800 125 83 1 134 257 31 155 6.76e-11 66.2
MS.gene65733.t1 MTR_8g095170 65.169 267 90 2 358 624 279 542 3.11e-124 384
MS.gene65733.t1 MTR_8g095170 55.030 169 75 1 62 229 28 196 4.27e-56 202
MS.gene65733.t1 MTR_8g095170 36.508 126 79 1 110 234 30 155 5.89e-15 79.0
MS.gene65733.t1 MTR_8g088930 44.731 427 190 8 366 753 338 757 6.20e-119 376
MS.gene65733.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 1.04e-61 221
MS.gene65733.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.39e-14 78.2
MS.gene65733.t1 MTR_8g088930 44.860 428 189 8 366 753 338 758 6.43e-119 376
MS.gene65733.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 9.50e-62 222
MS.gene65733.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.38e-14 78.2
MS.gene65733.t1 MTR_8g088930 54.118 255 113 2 369 623 341 591 5.44e-91 299
MS.gene65733.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 7.81e-62 220
MS.gene65733.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.48e-14 78.2
MS.gene65733.t1 MTR_8g088930 54.118 255 113 2 369 623 341 591 5.90e-91 299
MS.gene65733.t1 MTR_8g088930 49.746 197 99 0 60 256 9 205 8.39e-62 220
MS.gene65733.t1 MTR_8g088930 33.613 119 79 0 58 176 76 194 1.53e-14 77.8
MS.gene65733.t1 MTR_8g080860 36.765 204 119 1 60 263 16 209 1.44e-35 136
MS.gene65733.t1 MTR_8g080860 36.765 204 119 1 60 263 12 205 1.88e-35 136
MS.gene65733.t1 MTR_4g107460 35.176 199 118 2 66 263 11 199 4.39e-31 125
MS.gene65733.t1 MTR_4g107460 35.294 187 121 0 62 248 54 240 4.97e-31 125
MS.gene65733.t1 MTR_4g107460 32.022 178 121 0 62 239 77 254 6.17e-20 92.4
MS.gene65733.t1 MTR_6g043150 40.230 174 104 0 61 234 7 180 1.57e-29 120
MS.gene65733.t1 MTR_6g043150 38.220 191 117 1 62 251 77 267 1.13e-27 115
MS.gene65733.t1 MTR_6g043150 37.079 178 112 0 57 234 141 318 2.88e-24 105
MS.gene65733.t1 MTR_6g043150 41.803 122 69 1 53 172 204 325 2.91e-19 90.1
MS.gene65733.t1 MTR_6g043150 34.266 143 70 2 110 251 10 129 1.67e-11 66.6
MS.gene65733.t1 MTR_8g092090 35.417 192 116 1 62 245 30 221 2.77e-29 117
MS.gene65733.t1 MTR_8g092090 33.152 184 105 2 88 263 10 183 7.67e-23 99.0
MS.gene65733.t1 MTR_8g092090 35.570 149 96 0 62 210 84 232 3.17e-21 94.0
MS.gene65733.t1 MTR_2g078470 37.566 189 117 1 64 251 79 267 7.22e-28 116
MS.gene65733.t1 MTR_2g078470 35.385 195 125 1 58 251 142 336 1.33e-26 112
MS.gene65733.t1 MTR_2g078470 39.378 193 116 1 60 251 6 198 1.49e-24 106
MS.gene65733.t1 MTR_2g078470 39.726 146 88 0 62 207 215 360 1.45e-22 100
MS.gene65733.t1 MTR_2g078470 29.947 187 131 0 62 248 169 355 5.25e-19 90.1
MS.gene65733.t1 MTR_2g078470 32.530 166 112 0 65 230 195 360 6.69e-17 83.6
MS.gene65733.t1 MTR_2g078470 41.667 96 56 0 51 146 273 368 2.66e-15 79.0
MS.gene65733.t1 MTR_5g010840 30.303 264 138 3 19 244 75 330 1.49e-25 110
MS.gene65733.t1 MTR_5g010840 31.915 188 120 1 58 245 175 354 4.30e-22 99.8
MS.gene65733.t1 MTR_5g010840 39.815 108 65 0 57 164 258 365 4.64e-16 81.3
MS.gene65733.t1 MTR_5g010840 31.937 191 106 2 49 239 204 370 3.49e-15 78.6
MS.gene65733.t1 MTR_8g095240 35.678 199 95 2 69 234 9 207 1.68e-25 110
MS.gene65733.t1 MTR_8g095240 32.701 211 131 3 63 262 118 328 4.26e-25 109
MS.gene65733.t1 MTR_8g095240 32.474 194 120 3 61 243 70 263 2.08e-20 95.1
MS.gene65733.t1 MTR_8g095240 30.688 189 111 2 85 263 2 180 5.48e-18 87.8
MS.gene65733.t1 MTR_3g005910 59.459 74 28 1 483 556 1 72 4.39e-24 96.7
MS.gene65733.t1 MTR_7g451440 32.804 189 123 1 61 245 189 377 6.66e-24 106
MS.gene65733.t1 MTR_4g099180 30.702 228 148 2 18 241 132 353 1.64e-23 104
MS.gene65733.t1 MTR_4g099180 29.605 152 98 1 94 245 165 307 1.85e-13 73.6
MS.gene65733.t1 MTR_8g080340 35.057 174 89 2 47 220 3 152 2.14e-23 98.2
MS.gene65733.t1 MTR_8g080340 33.099 142 94 1 134 274 20 161 4.94e-18 82.8
MS.gene65733.t1 MTR_8g080340 35.507 138 89 0 111 248 20 157 1.28e-16 78.6
MS.gene65733.t1 MTR_5g058920 34.706 170 111 0 65 234 198 367 9.32e-23 102
MS.gene65733.t1 MTR_5g058920 42.697 89 51 0 146 234 187 275 1.47e-13 73.9
MS.gene65733.t1 MTR_5g058920 32.609 138 93 0 109 246 196 333 7.88e-13 71.6
MS.gene65733.t1 MTR_8g007500 31.220 205 137 1 45 245 178 382 1.83e-22 101
MS.gene65733.t1 MTR_8g080350 30.172 232 123 3 63 255 125 356 2.60e-22 100
MS.gene65733.t1 MTR_8g080350 33.758 157 102 1 68 224 86 240 3.92e-16 81.6
MS.gene65733.t1 MTR_8g080350 32.886 149 85 2 58 191 189 337 3.76e-15 78.6
MS.gene65733.t1 MTR_3g072650 32.164 171 116 0 64 234 185 355 2.70e-22 100
MS.gene65733.t1 MTR_3g072650 31.159 138 95 0 109 246 184 321 4.40e-14 75.5
MS.gene65733.t1 MTR_3g072650 34.375 128 84 0 66 193 233 360 5.89e-14 75.1
MS.gene65733.t1 MTR_3g072650 32.353 170 115 0 65 234 186 355 2.88e-22 100
MS.gene65733.t1 MTR_3g072650 31.159 138 95 0 109 246 184 321 3.01e-14 75.9
MS.gene65733.t1 MTR_3g072650 34.375 128 84 0 66 193 233 360 6.99e-14 74.7
MS.gene65733.t1 MTR_8g080310 35.915 142 91 0 103 244 3 144 2.55e-21 91.7
MS.gene65733.t1 MTR_8g080310 35.570 149 96 0 86 234 9 157 2.51e-19 85.9
MS.gene65733.t1 MTR_8g080310 32.867 143 96 0 69 211 15 157 8.29e-18 81.6
MS.gene65733.t1 MTR_1g097110 33.333 198 110 8 437 620 1314 1503 3.77e-15 80.5
MS.gene65733.t1 MTR_8g023080 30.693 202 110 7 437 620 1524 1713 3.96e-13 73.9
MS.gene65733.t1 MTR_8g023080 30.693 202 110 7 437 620 1532 1721 3.97e-13 73.9
MS.gene65733.t1 MTR_3g023310 33.846 130 73 1 74 203 6 122 8.44e-13 67.8
MS.gene65733.t1 MTR_3g023310 33.884 121 67 1 123 243 9 116 1.31e-12 67.4
MS.gene65733.t1 MTR_8g092410 34.109 129 82 2 103 228 149 277 1.39e-12 70.5
MS.gene65733.t1 MTR_8g092410 32.414 145 91 4 113 253 138 279 3.20e-12 69.3
MS.gene65733.t1 MTR_4g099180 31.724 145 93 1 35 179 149 287 1.65e-12 69.7
MS.gene65733.t1 MTR_4g099180 29.710 138 88 1 94 231 165 293 2.61e-12 68.9
MS.gene65733.t1 MTR_4g099180 36.667 90 57 0 145 234 161 250 1.54e-11 66.6
MS.gene65733.t1 MTR_4g124590 29.703 202 112 7 437 620 1524 1713 1.74e-12 72.0
MS.gene65733.t1 MTR_4g099180 31.724 145 93 1 35 179 149 287 3.03e-12 68.9
MS.gene65733.t1 MTR_4g099180 29.286 140 90 1 94 233 165 295 3.83e-12 68.6
MS.gene65733.t1 MTR_4g099180 35.870 92 59 0 143 234 159 250 2.87e-11 65.9
MS.gene65733.t1 MTR_1g112280 30.709 127 88 0 89 215 615 741 3.95e-11 67.0
MS.gene65733.t1 MTR_4g085090 29.798 198 117 8 437 620 1466 1655 5.80e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65733.t1 AT3G07960 68.989 732 207 8 33 761 1 715 0.0 1045
MS.gene65733.t1 AT3G56960 62.750 800 236 16 1 760 1 778 0.0 1008
MS.gene65733.t1 AT3G56960 62.750 800 236 16 1 760 1 778 0.0 1008
MS.gene65733.t1 AT2G41210 62.642 795 240 15 1 761 1 772 0.0 993
MS.gene65733.t1 AT3G07960 67.767 636 188 6 33 667 1 620 0.0 895
MS.gene65733.t1 AT3G07960 69.331 613 173 5 33 644 1 599 0.0 888
MS.gene65733.t1 AT3G07960 69.331 613 173 5 33 644 1 599 0.0 888
MS.gene65733.t1 AT2G26420 50.209 719 297 14 50 760 39 704 0.0 690
MS.gene65733.t1 AT2G26420 50.348 719 310 15 50 760 39 718 0.0 688
MS.gene65733.t1 AT2G26420 50.348 719 310 15 50 760 39 718 0.0 688
MS.gene65733.t1 AT1G10900 40.498 763 376 14 60 760 7 753 0.0 555
MS.gene65733.t1 AT1G10900 34.074 135 89 0 102 236 3 137 4.32e-16 83.2
MS.gene65733.t1 AT1G10900 38.000 100 60 1 144 243 1 98 7.48e-15 79.3
MS.gene65733.t1 AT1G10900 40.498 763 376 14 60 760 7 753 0.0 555
MS.gene65733.t1 AT1G10900 34.074 135 89 0 102 236 3 137 4.32e-16 83.2
MS.gene65733.t1 AT1G10900 38.000 100 60 1 144 243 1 98 7.48e-15 79.3
MS.gene65733.t1 AT1G10900 40.498 763 376 14 60 760 7 753 0.0 555
MS.gene65733.t1 AT1G10900 34.074 135 89 0 102 236 3 137 4.32e-16 83.2
MS.gene65733.t1 AT1G10900 38.000 100 60 1 144 243 1 98 7.48e-15 79.3
MS.gene65733.t1 AT1G77740 60.698 430 156 6 341 760 327 753 2.82e-176 524
MS.gene65733.t1 AT1G77740 58.427 178 74 0 59 236 72 249 6.94e-69 241
MS.gene65733.t1 AT1G77740 31.452 124 85 0 134 257 78 201 1.07e-15 82.0
MS.gene65733.t1 AT1G77740 34.653 101 66 0 42 142 147 247 9.04e-15 79.0
MS.gene65733.t1 AT1G77740 40.426 94 56 0 150 243 71 164 7.31e-14 75.9
MS.gene65733.t1 AT1G77740 60.698 430 156 6 341 760 327 753 2.82e-176 524
MS.gene65733.t1 AT1G77740 58.427 178 74 0 59 236 72 249 6.94e-69 241
MS.gene65733.t1 AT1G77740 31.452 124 85 0 134 257 78 201 1.07e-15 82.0
MS.gene65733.t1 AT1G77740 34.653 101 66 0 42 142 147 247 9.04e-15 79.0
MS.gene65733.t1 AT1G77740 40.426 94 56 0 150 243 71 164 7.31e-14 75.9
MS.gene65733.t1 AT1G21980 61.743 413 145 6 358 760 342 751 1.13e-174 520
MS.gene65733.t1 AT1G21980 60.112 178 71 0 59 236 71 248 9.94e-71 246
MS.gene65733.t1 AT1G21980 30.645 124 86 0 134 257 77 200 3.17e-14 77.0
MS.gene65733.t1 AT1G21980 33.607 122 72 1 42 163 146 258 3.77e-13 73.6
MS.gene65733.t1 AT1G21980 39.362 94 57 0 150 243 70 163 6.60e-13 72.8
MS.gene65733.t1 AT3G09920 47.651 447 187 8 348 757 373 809 1.46e-130 407
MS.gene65733.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.39e-55 205
MS.gene65733.t1 AT3G09920 47.651 447 187 8 348 757 373 809 1.46e-130 407
MS.gene65733.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.39e-55 205
MS.gene65733.t1 AT3G09920 47.651 447 187 8 348 757 373 809 1.46e-130 407
MS.gene65733.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.39e-55 205
MS.gene65733.t1 AT3G09920 47.651 447 187 8 348 757 373 809 1.46e-130 407
MS.gene65733.t1 AT3G09920 40.000 235 140 1 16 250 6 239 1.39e-55 205
MS.gene65733.t1 AT1G60890 46.189 433 186 7 367 759 342 767 3.27e-122 384
MS.gene65733.t1 AT1G60890 45.320 203 111 0 54 256 1 203 1.63e-57 210
MS.gene65733.t1 AT1G60890 46.189 433 186 7 367 759 354 779 6.05e-122 384
MS.gene65733.t1 AT1G60890 45.960 198 107 0 59 256 18 215 2.97e-57 209
MS.gene65733.t1 AT1G01460 34.375 416 205 8 405 760 15 422 3.16e-72 242
MS.gene65733.t1 AT4G01190 35.233 386 207 8 410 758 12 391 2.45e-68 231
MS.gene65733.t1 AT4G01190 35.233 386 207 8 410 758 22 401 3.19e-68 231
MS.gene65733.t1 AT4G01190 35.233 386 207 8 410 758 22 401 3.19e-68 231
MS.gene65733.t1 AT1G77660 34.884 172 112 0 63 234 177 348 1.57e-25 110
MS.gene65733.t1 AT1G77660 34.375 128 84 0 66 193 226 353 1.11e-15 80.5
MS.gene65733.t1 AT1G21920 32.292 192 130 0 43 234 153 344 1.27e-23 103
MS.gene65733.t1 AT1G21920 34.328 134 88 0 58 191 214 347 6.44e-15 77.8
MS.gene65733.t1 AT1G21920 38.462 104 64 0 66 169 245 348 4.70e-11 65.9
MS.gene65733.t1 AT1G21920 32.292 192 130 0 43 234 153 344 1.63e-23 104
MS.gene65733.t1 AT1G21920 34.328 134 88 0 58 191 214 347 5.33e-15 78.6
MS.gene65733.t1 AT1G21920 38.462 104 64 0 66 169 245 348 2.97e-11 66.6
MS.gene65733.t1 AT2G35170 33.511 188 120 2 59 242 222 408 4.36e-23 103
MS.gene65733.t1 AT2G35170 30.719 153 97 1 94 246 219 362 3.45e-16 82.8
MS.gene65733.t1 AT2G35170 30.968 155 107 0 91 245 230 384 2.36e-15 80.1
MS.gene65733.t1 AT4G17080 32.418 182 119 1 65 242 258 439 8.15e-23 103
MS.gene65733.t1 AT4G17080 35.821 134 86 0 61 194 300 433 4.19e-18 89.0
MS.gene65733.t1 AT4G17080 30.921 152 96 1 94 245 250 392 1.09e-16 84.3
MS.gene65733.t1 AT4G17080 35.088 114 74 0 133 246 257 370 1.03e-11 68.6
MS.gene65733.t1 AT3G14270 31.579 171 89 6 468 620 1536 1696 1.67e-12 72.0
MS.gene65733.t1 AT3G14270 31.579 171 89 6 468 620 1536 1696 1.67e-12 72.0
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1464 1653 1.02e-11 69.3
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1465 1654 1.09e-11 69.3
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1467 1656 1.09e-11 69.3
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1468 1657 1.10e-11 69.3
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1468 1657 1.10e-11 69.3
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1468 1657 1.10e-11 69.3
MS.gene65733.t1 AT4G33240 29.703 202 112 7 437 620 1428 1617 1.13e-11 69.3

Find 180 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGGAATGGTTCGTTTAA+TGG 0.232886 3.2:+7539684 MS.gene65733:CDS
TCTTCAACATGAAAGAATTA+TGG 0.236569 3.2:+7543084 MS.gene65733:CDS
TTGATCCAAAAGAGAAAGTT+TGG 0.249253 3.2:+7540980 MS.gene65733:CDS
TAAGTACCACTTTGTTCTTT+AGG 0.272506 3.2:-7539834 None:intergenic
CTAGTCCAAACTTTCTCTTT+TGG 0.276859 3.2:-7540985 None:intergenic
ACCCTTCATGCGAATTTAGA+TGG 0.278659 3.2:+7541043 MS.gene65733:CDS
ATGGTCAAGGTAAGTATCTT+TGG 0.278950 3.2:+7539358 MS.gene65733:CDS
GTGATACTTATAAAGGGAAT+TGG 0.288743 3.2:+7539526 MS.gene65733:CDS
TATGATGGTTGTTGGGAAAA+TGG 0.296406 3.2:+7539741 MS.gene65733:CDS
TAATTCAGGTGGATTCAATT+AGG 0.298886 3.2:+7543439 MS.gene65733:intron
GGTACAATGATGTGGCAAAA+TGG 0.307349 3.2:+7539711 MS.gene65733:CDS
TTATGATGGTGAGTGGAAAA+AGG 0.313331 3.2:+7539602 MS.gene65733:CDS
GGTAAGTATCTTTGGATTGA+TGG 0.314470 3.2:+7539366 MS.gene65733:CDS
GACTTGAAAGGTTCGACGTT+TGG 0.319529 3.2:+7542212 MS.gene65733:CDS
GGAGGAATGGTTCGTTTAAT+GGG 0.327301 3.2:+7539685 MS.gene65733:CDS
CACACCTTGCGGTCGCAGTT+CGG 0.338927 3.2:+7543162 MS.gene65733:CDS
TCCTCCATTGACCAATATAA+TGG 0.339875 3.2:-7539668 None:intergenic
ACTACTGTCCGGTAGTATTC+AGG 0.348899 3.2:+7541070 MS.gene65733:CDS
TCATCTGGTGATACTTATAA+AGG 0.349922 3.2:+7539519 MS.gene65733:CDS
ATTGAATTGGCCGGGTTTAG+AGG 0.376512 3.2:+7539980 MS.gene65733:CDS
CATGCCAGCGCGAGCCGAAA+TGG 0.381500 3.2:+7543468 MS.gene65733:CDS
CTCCATTGTGTAAAACTAAC+AGG 0.382205 3.2:+7542029 MS.gene65733:CDS
CTTCATGCAGACAAGTTGAT+AGG 0.393068 3.2:+7543050 MS.gene65733:intron
GGCGTATGCTTGGATCCTTC+TGG 0.393211 3.2:-7541015 None:intergenic
GGAATAGGTATGATGGTTGT+TGG 0.396978 3.2:+7539733 MS.gene65733:CDS
CATGGTAAAGGGACTTATAT+AGG 0.402597 3.2:+7539495 MS.gene65733:CDS
TGAATCTGCAACTAGGTATC+AGG 0.404283 3.2:+7540246 MS.gene65733:CDS
ACATATCGATATCATGTAAT+CGG 0.410653 3.2:-7541572 None:intergenic
CCGGGTTTAGAGGAAGATAA+AGG 0.411765 3.2:+7539990 MS.gene65733:CDS
ACACCTTGCGGTCGCAGTTC+GGG 0.419338 3.2:+7543163 MS.gene65733:CDS
CGAAAGGGAATGGTACGTTT+AGG 0.421918 3.2:+7539769 MS.gene65733:CDS
AAAATCTGCATTTGATGAGT+TGG 0.424427 3.2:+7540115 MS.gene65733:CDS
TCAGGTTCGCTTTGTCATCA+TGG 0.425258 3.2:+7542148 MS.gene65733:intron
AGAAAGGAACTCATGGTAAT+GGG 0.427258 3.2:+7540033 MS.gene65733:CDS
GGGAAAATGGTTTGCCGAAA+GGG 0.430287 3.2:+7539754 MS.gene65733:CDS
TGATGTGGCAAAATGGGAAT+AGG 0.431149 3.2:+7539718 MS.gene65733:CDS
CGCGAGCCGAAATGGCTTTG+CGG 0.434207 3.2:+7543476 MS.gene65733:CDS
AGATCCTTGAGTGTTGTTGT+TGG 0.434916 3.2:-7542269 None:intergenic
CTTCGGACAAGATATTGAAT+TGG 0.439713 3.2:+7539967 MS.gene65733:CDS
TGGGGAAAGGTAGGTTTAGT+TGG 0.440017 3.2:+7539427 MS.gene65733:CDS
AAGAAAGGAACTCATGGTAA+TGG 0.441568 3.2:+7540032 MS.gene65733:CDS
AAATCTGCATTTGATGAGTT+GGG 0.447343 3.2:+7540116 MS.gene65733:CDS
GGGACTTATATAGGTTCATC+TGG 0.447511 3.2:+7539504 MS.gene65733:CDS
CTGCTTATTATAAACACGTC+CGG 0.448129 3.2:+7541970 MS.gene65733:CDS
AATCAGCAACTGCAAAGAAA+AGG 0.448593 3.2:+7539175 MS.gene65733:CDS
TGATACTTATAAAGGGAATT+GGG 0.449590 3.2:+7539527 MS.gene65733:CDS
ATGGACATGGTAGGTATCAA+TGG 0.450321 3.2:+7539634 MS.gene65733:CDS
TGCATCCACTCCTGAAAGAC+GGG 0.450557 3.2:-7543221 None:intergenic
CTAGTGATGCTCATCTTGAA+TGG 0.455044 3.2:+7539871 MS.gene65733:CDS
TGAGTTCCTTTCTTATGAAT+CGG 0.455684 3.2:-7540023 None:intergenic
AGTGGTACTTATTATCCATC+TGG 0.456958 3.2:+7539846 MS.gene65733:CDS
CTTCGTGAACTCTCATCTCC+TGG 0.462287 3.2:+7541607 MS.gene65733:CDS
TTTCCTAACTGTTGATTCCC+AGG 0.463471 3.2:-7539154 None:intergenic
CAGGTTCGCTTTGTCATCAT+GGG 0.464272 3.2:+7542149 MS.gene65733:intron
ACACTGGTCACGAAGTTCTT+CGG 0.468955 3.2:+7542005 MS.gene65733:CDS
TGAATGGCATTGTTAAAGCC+TGG 0.470035 3.2:+7539136 MS.gene65733:CDS
TTCCATCTAAATTCGCATGA+AGG 0.470219 3.2:-7541045 None:intergenic
GTTGGCTCTACTTCTGCCTC+CGG 0.470271 3.2:-7542251 None:intergenic
AATTATGGATTACAGTATGT+TGG 0.471440 3.2:+7543099 MS.gene65733:CDS
CTTGTTATATGCATGGTAAA+GGG 0.472980 3.2:+7539484 MS.gene65733:CDS
GAATAGGTATGATGGTTGTT+GGG 0.474191 3.2:+7539734 MS.gene65733:CDS
TATGTAGGTGAATGGATTCA+AGG 0.474984 3.2:+7539396 MS.gene65733:CDS
TCTATTTGACGAACGATGAC+CGG 0.479278 3.2:+7541647 MS.gene65733:CDS
CTAAACGTACCATTCCCTTT+CGG 0.479325 3.2:-7539768 None:intergenic
AAAGCCATTTCGGCTCGCGC+TGG 0.481604 3.2:-7543472 None:intergenic
TGGTCGCACTACTGATAAAC+CGG 0.482177 3.2:+7542232 MS.gene65733:CDS
AAGCGTTTCGAGTACAGCCT+TGG 0.484880 3.2:-7543670 None:intergenic
TCAACGGCTGAGATTGAAGT+TGG 0.485913 3.2:-7543646 None:intergenic
AAGCCTGGGAATCAACAGTT+AGG 0.486200 3.2:+7539151 MS.gene65733:CDS
CTCAATATGTCATTCATAGA+CGG 0.488291 3.2:+7542186 MS.gene65733:CDS
CATAGACGGTTTGACTTGAA+AGG 0.488527 3.2:+7542200 MS.gene65733:CDS
AATGGTTCGTTTAATGGGAA+TGG 0.492406 3.2:+7539690 MS.gene65733:CDS
CATCTGGTGATACTTATAAA+GGG 0.494249 3.2:+7539520 MS.gene65733:CDS
AATAAAAGCTCCTAAAAGAC+CGG 0.494587 3.2:+7540181 MS.gene65733:CDS
GTACAATGATGTGGCAAAAT+GGG 0.495315 3.2:+7539712 MS.gene65733:CDS
GGACAAGATATTGAATTGGC+CGG 0.497558 3.2:+7539971 MS.gene65733:CDS
TATTTCGGTTGCAGAAGTCT+TGG 0.499689 3.2:+7542306 MS.gene65733:CDS
TAGTGATGCTCATCTTGAAT+GGG 0.499937 3.2:+7539872 MS.gene65733:CDS
ACTTGTTATATGCATGGTAA+AGG 0.500619 3.2:+7539483 MS.gene65733:CDS
TCAAGTGATGCACTTGGAGC+AGG 0.501043 3.2:-7540940 None:intergenic
ATCGATATCATGTAATCGGC+AGG 0.501290 3.2:-7541568 None:intergenic
AACAGGAAGTGCACAAAAGA+AGG 0.502174 3.2:+7542046 MS.gene65733:CDS
CCTTTATCTTCCTCTAAACC+CGG 0.504792 3.2:-7539990 None:intergenic
AGACTTTCAAGAGAATGAGC+AGG 0.504965 3.2:+7539109 None:intergenic
GTTGAAAAGACTATGCCTAA+TGG 0.507158 3.2:+7539297 MS.gene65733:CDS
ATCAGCAACTGCAAAGAAAA+GGG 0.510464 3.2:+7539176 MS.gene65733:CDS
GAGGCAATTCTGTTCAAAGC+TGG 0.510720 3.2:+7540138 MS.gene65733:CDS
GTTGTATGTATGTAGGTGAA+TGG 0.511069 3.2:+7539388 MS.gene65733:CDS
TTCAAGACTTGTTATATGCA+TGG 0.518520 3.2:+7539477 MS.gene65733:CDS
CGAGTACAGCCTTGGATCAA+CGG 0.519101 3.2:-7543662 None:intergenic
CAGTTGGTTGGCGAACCAAC+CGG 0.520429 3.2:+7543520 MS.gene65733:CDS
CCTCCATCATCGAATTCAGA+TGG 0.521013 3.2:-7543196 None:intergenic
ATTGATGGTTGTATGTATGT+AGG 0.525013 3.2:+7539381 MS.gene65733:CDS
TCCATCTAAATTCGCATGAA+GGG 0.526628 3.2:-7541044 None:intergenic
TGCTTATTATAAACACGTCC+GGG 0.526968 3.2:+7541971 MS.gene65733:CDS
GGTAATGAGAGTTATCCTAA+TGG 0.527045 3.2:+7539573 MS.gene65733:CDS
CACTTGTGAAAGTCCTCAGT+TGG 0.530548 3.2:+7543504 MS.gene65733:CDS
GACAAGATATTGAATTGGCC+GGG 0.530886 3.2:+7539972 MS.gene65733:CDS
GGAACCATTATATTGGTCAA+TGG 0.532331 3.2:+7539664 MS.gene65733:CDS
CCTTCATATGTAGCACCACT+AGG 0.535657 3.2:-7539450 None:intergenic
GATAATATCATACATCTCTC+CGG 0.536661 3.2:-7543539 None:intergenic
CAATCTCAGCCGTTGATCCA+AGG 0.537575 3.2:+7543653 MS.gene65733:CDS
GATTACATGATATCGATATG+TGG 0.537900 3.2:+7541574 MS.gene65733:CDS
GAATGGCATTGTTAAAGCCT+GGG 0.539835 3.2:+7539137 MS.gene65733:CDS
CTCCATCATCGAATTCAGAT+GGG 0.542680 3.2:-7543195 None:intergenic
TCTACATTGGCTACAGACAT+TGG 0.544183 3.2:-7539216 None:intergenic
ATGGATTACAGTATGTTGGT+TGG 0.545087 3.2:+7543103 MS.gene65733:CDS
CGGACGTGTTTATAATAAGC+AGG 0.548622 3.2:-7541969 None:intergenic
TATATTGGTCAATGGAGGAA+TGG 0.550067 3.2:+7539672 MS.gene65733:CDS
CCATCAGCTGAACTCCGTCT+AGG 0.552578 3.2:-7540059 None:intergenic
CAAAATGGGAATAGGTATGA+TGG 0.552931 3.2:+7539726 MS.gene65733:CDS
GGCATCATAGACATATTACA+AGG 0.552961 3.2:+7543571 MS.gene65733:CDS
TTCATGCAGACAAGTTGATA+GGG 0.556313 3.2:+7543051 MS.gene65733:intron
CTTATGTTGAATCTGCAACT+AGG 0.559603 3.2:+7540239 MS.gene65733:CDS
TATGCATACCTGAATACTAC+CGG 0.561063 3.2:-7541078 None:intergenic
AGGGTGAGGTGGCGTATGCT+TGG 0.561454 3.2:-7541025 None:intergenic
AATGGTTTGCCGAAAGGGAA+TGG 0.561505 3.2:+7539759 MS.gene65733:CDS
TGGACTAGATTTCCACCAGA+AGG 0.561843 3.2:+7541000 MS.gene65733:CDS
CTGCATCCACTCCTGAAAGA+CGG 0.563302 3.2:-7543222 None:intergenic
GTCGTCGTCGTCTTCACAAG+AGG 0.564848 3.2:+7539266 MS.gene65733:CDS
GATAAGTTTCCACATGGTCA+AGG 0.568574 3.2:+7539345 MS.gene65733:CDS
TGTGAAAGTCCTCAGTTGGT+TGG 0.573523 3.2:+7543508 MS.gene65733:CDS
CAAGGTGTGACATTGCCACT+AGG 0.574455 3.2:-7543148 None:intergenic
CTAAATTCGCATGAAGGGTG+AGG 0.575158 3.2:-7541039 None:intergenic
TGGGAAAATGGTTTGCCGAA+AGG 0.575980 3.2:+7539753 MS.gene65733:CDS
GGACATTACGACATATCCTT+CGG 0.576434 3.2:+7539950 MS.gene65733:CDS
ATGGTAATGGGAAGCCTAGA+CGG 0.578110 3.2:+7540045 MS.gene65733:CDS
CCGGGAGAGACTATATCTAA+AGG 0.580631 3.2:+7540200 MS.gene65733:CDS
ATTACATGATATCGATATGT+GGG 0.581325 3.2:+7541575 MS.gene65733:CDS
GACGGAGTTCAGCTGATGGA+AGG 0.583727 3.2:+7540063 MS.gene65733:CDS
GTCATCTTCATCATCTACAT+TGG 0.584009 3.2:-7539229 None:intergenic
CCTAGTGGTGCTACATATGA+AGG 0.584675 3.2:+7539450 MS.gene65733:CDS
TCTTGAATGGGATCCTCAAG+AGG 0.584761 3.2:+7539884 MS.gene65733:CDS
ATATCATACATCTCTCCGGT+TGG 0.587123 3.2:-7543535 None:intergenic
ATTCATAAGAAAGGAACTCA+TGG 0.587474 3.2:+7540026 MS.gene65733:CDS
GACTTTCAAGAGAATGAGCA+GGG 0.592006 3.2:+7539110 None:intergenic
TCAACGGTGAAAACCTCTTG+AGG 0.592554 3.2:-7539897 None:intergenic
CCAGTGTATTCTCAAAAGCC+CGG 0.593209 3.2:-7541989 None:intergenic
ACCCCATCTGAATTCGATGA+TGG 0.596388 3.2:+7543193 MS.gene65733:CDS
CCTAGACGGAGTTCAGCTGA+TGG 0.596547 3.2:+7540059 MS.gene65733:CDS
GCTCCCGAACTGCGACCGCA+AGG 0.599381 3.2:-7543166 None:intergenic
CCATCTGAATTCGATGATGG+AGG 0.601211 3.2:+7543196 MS.gene65733:CDS
AGTGGCAATGTCACACCTTG+CGG 0.601384 3.2:+7543151 MS.gene65733:CDS
TTCAAATCAAGTGATGCACT+TGG 0.601607 3.2:-7540946 None:intergenic
CTTAGTAATCACAGCTCTGA+AGG 0.602212 3.2:+7540086 MS.gene65733:CDS
CCTTTAGATATAGTCTCTCC+CGG 0.604269 3.2:-7540200 None:intergenic
AAGGGAATGGTACGTTTAGG+TGG 0.606012 3.2:+7539772 MS.gene65733:CDS
CAATTCAATATCTTGTCCGA+AGG 0.609486 3.2:-7539966 None:intergenic
ATCTCATCGTAGATCCTAGT+CGG 0.611399 3.2:+7543248 MS.gene65733:CDS
ATAAAAGCTCCTAAAAGACC+GGG 0.616287 3.2:+7540182 MS.gene65733:CDS
GGTACGTTTAGGTGGTCTGA+TGG 0.617080 3.2:+7539780 MS.gene65733:CDS
GTGTGCAAAATGGACATGGT+AGG 0.621136 3.2:+7539625 MS.gene65733:CDS
GGTAGGTTTAGTTGGCCTAG+TGG 0.621887 3.2:+7539435 MS.gene65733:CDS
ACCATTATATTGGTCAATGG+AGG 0.622374 3.2:+7539667 MS.gene65733:CDS
AAAGATCCTAAAGAACAAAG+TGG 0.627694 3.2:+7539828 MS.gene65733:CDS
AGAGCCAACAACAACACTCA+AGG 0.630498 3.2:+7542265 MS.gene65733:CDS
TAGATGGAAAGACTACTGTC+CGG 0.632964 3.2:+7541059 MS.gene65733:CDS
ATGTATGATTTGTCCTTGTG+AGG 0.634796 3.2:+7539929 MS.gene65733:CDS
TGAGCATCACTAGAACCAGA+TGG 0.635426 3.2:-7539861 None:intergenic
AGAATGAGCAGGGAGCTGAA+TGG 0.636348 3.2:+7539120 None:intergenic
CCATAGCACAGACATTCCGT+TGG 0.636509 3.2:+7540913 MS.gene65733:intron
GTTGGTTCGCCAACCAACTG+AGG 0.640547 3.2:-7543517 None:intergenic
AATTCGCATGAAGGGTGAGG+TGG 0.641968 3.2:-7541036 None:intergenic
AGATACTTACCTTGACCATG+TGG 0.643398 3.2:-7539354 None:intergenic
GTATGCTTGGATCCTTCTGG+TGG 0.648961 3.2:-7541012 None:intergenic
CATACATTCAATCAACTCAA+CGG 0.650965 3.2:-7539913 None:intergenic
GCATCCACTCCTGAAAGACG+GGG 0.661898 3.2:-7543220 None:intergenic
TCTGCATTTGATGAGTTGGG+AGG 0.661937 3.2:+7540119 MS.gene65733:CDS
AAGGGTGTGCAAAATGGACA+TGG 0.663197 3.2:+7539621 MS.gene65733:CDS
ATGGGAATGGTACAATGATG+TGG 0.671388 3.2:+7539703 MS.gene65733:CDS
TGATTGAAAATATACCGACT+AGG 0.671964 3.2:-7543262 None:intergenic
AGTAATCACAGCTCTGAAGG+AGG 0.672594 3.2:+7540089 MS.gene65733:CDS
CATCCACTCCTGAAAGACGG+GGG 0.675036 3.2:-7543219 None:intergenic
TGGCTTGATAAGTTTCCACA+TGG 0.676296 3.2:+7539339 MS.gene65733:CDS
TCCATCATCGAATTCAGATG+GGG 0.681693 3.2:-7543194 None:intergenic
ACTTGGAGCAGGTCTTCCAA+CGG 0.684197 3.2:-7540929 None:intergenic
TTTCGAGATACAAGTCCTAG+TGG 0.689948 3.2:+7543133 MS.gene65733:CDS
TATGTCGTAATGTCCTCACA+AGG 0.724021 3.2:-7539942 None:intergenic
TCGCACTACTGATAAACCGG+AGG 0.733166 3.2:+7542235 MS.gene65733:CDS
AAAGCTGGAATAAATCACCG+CGG 0.816433 3.2:+7540153 MS.gene65733:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGACTTAAATTTTATATTT+CGG + chr3.2:7542291-7542310 MS.gene65733:CDS 10.0%
!! AAAAATTAATTCCAAAAGTT+GGG - chr3.2:7540629-7540648 None:intergenic 15.0%
!! AACAGAAAATATTTAATGTT+TGG - chr3.2:7543360-7543379 None:intergenic 15.0%
!! AACTTTAAATATAAGTTAGA+AGG + chr3.2:7542938-7542957 MS.gene65733:intron 15.0%
!! ATAAATTACATTTCAAAAGA+AGG - chr3.2:7542793-7542812 None:intergenic 15.0%
!! ATTATCGAATAAAATTGATT+TGG - chr3.2:7540582-7540601 None:intergenic 15.0%
!! CTAAATTACAAATATTTGAT+AGG - chr3.2:7542983-7543002 None:intergenic 15.0%
!! TTTAATGAATGAAAGAATTA+TGG + chr3.2:7542883-7542902 MS.gene65733:intron 15.0%
!!! ATATTTTTTTTTTTTGACGT+CGG + chr3.2:7543009-7543028 MS.gene65733:intron 15.0%
!!! TATGATATTATCATCTTTTT+TGG + chr3.2:7543550-7543569 MS.gene65733:CDS 15.0%
!!! TTATATTTAAAGTTTCAAAC+AGG - chr3.2:7542932-7542951 None:intergenic 15.0%
!!! TTGTTTATAAACTTTTACTT+TGG + chr3.2:7542079-7542098 MS.gene65733:intron 15.0%
!! AAAATTAATTCCAAAAGTTG+GGG - chr3.2:7540628-7540647 None:intergenic 20.0%
!! AATATGATTCAGTAGATTAA+TGG - chr3.2:7541902-7541921 None:intergenic 20.0%
!! ATATAAGCTTATAAAGTGAA+GGG - chr3.2:7541770-7541789 None:intergenic 20.0%
!! ATATTTAATGTTTGGCTAAT+TGG - chr3.2:7543352-7543371 None:intergenic 20.0%
!! CTGAATACATGTATATAAAA+GGG + chr3.2:7540471-7540490 MS.gene65733:intron 20.0%
!! GAAAAAAAAAACACTATGTT+TGG - chr3.2:7540670-7540689 None:intergenic 20.0%
!! GAAAAATTAATTCCAAAAGT+TGG - chr3.2:7540630-7540649 None:intergenic 20.0%
!! GAGAGAATTGATAAAAAAAA+AGG - chr3.2:7541745-7541764 None:intergenic 20.0%
!! TATATAAGCTTATAAAGTGA+AGG - chr3.2:7541771-7541790 None:intergenic 20.0%
!! TCTGAATACATGTATATAAA+AGG + chr3.2:7540470-7540489 MS.gene65733:intron 20.0%
!! TGAATACATGTATATAAAAG+GGG + chr3.2:7540472-7540491 MS.gene65733:intron 20.0%
!! TGTATTGTGTATTATAATTC+AGG + chr3.2:7543425-7543444 MS.gene65733:intron 20.0%
!! TTAATATATATTCTCCACTA+GGG - chr3.2:7540745-7540764 None:intergenic 20.0%
!! TTCACTTTATAAGCTTATAT+AGG + chr3.2:7541770-7541789 MS.gene65733:intron 20.0%
!! TTTAATATATATTCTCCACT+AGG - chr3.2:7540746-7540765 None:intergenic 20.0%
!!! TGATTGCATTTATATTTTCA+GGG + chr3.2:7541519-7541538 MS.gene65733:intron 20.0%
!!! TTGATTGCATTTATATTTTC+AGG + chr3.2:7541518-7541537 MS.gene65733:intron 20.0%
! AAAAATGGGAACCATTATAT+TGG + chr3.2:7539657-7539676 MS.gene65733:CDS 25.0%
! AAACAATATTACATGATTGC+AGG + chr3.2:7541929-7541948 MS.gene65733:intron 25.0%
! ACATATCGATATCATGTAAT+CGG - chr3.2:7541575-7541594 None:intergenic 25.0%
! AGTCACATTTCATAAATTTC+AGG + chr3.2:7542130-7542149 MS.gene65733:intron 25.0%
! ATCATATGACTTAAAATTGC+AGG - chr3.2:7542600-7542619 None:intergenic 25.0%
! ATTACATGATATCGATATGT+GGG + chr3.2:7541575-7541594 MS.gene65733:CDS 25.0%
! ATTGTGTATTATAATTCAGG+TGG + chr3.2:7543428-7543447 MS.gene65733:intron 25.0%
! GAATACATGTATATAAAAGG+GGG + chr3.2:7540473-7540492 MS.gene65733:intron 25.0%
! GGGTTATGAATTTGAAAAAT+GGG + chr3.2:7539547-7539566 MS.gene65733:CDS 25.0%
! GGTTATGAATTTGAAAAATG+GGG + chr3.2:7539548-7539567 MS.gene65733:CDS 25.0%
! GGTTTCATTAAACATATGAT+TGG + chr3.2:7542426-7542445 MS.gene65733:intron 25.0%
! TCTTCAACATGAAAGAATTA+TGG + chr3.2:7543084-7543103 MS.gene65733:CDS 25.0%
! TGATACTTATAAAGGGAATT+GGG + chr3.2:7539527-7539546 MS.gene65733:CDS 25.0%
! TGATAGGAAAAACTGTATTA+GGG - chr3.2:7542967-7542986 None:intergenic 25.0%
! TGCAATCATGTAATATTGTT+TGG - chr3.2:7541930-7541949 None:intergenic 25.0%
! TGGGTTATGAATTTGAAAAA+TGG + chr3.2:7539546-7539565 MS.gene65733:CDS 25.0%
! TTAACACTGATAGCTATATA+TGG + chr3.2:7540808-7540827 MS.gene65733:intron 25.0%
! TTATATCTAGCCAATGAAAA+TGG - chr3.2:7541716-7541735 None:intergenic 25.0%
! TTCAAAAGAAGGCTAAAATA+AGG - chr3.2:7542782-7542801 None:intergenic 25.0%
! TTGATAGGAAAAACTGTATT+AGG - chr3.2:7542968-7542987 None:intergenic 25.0%
!! AATTATGGATTACAGTATGT+TGG + chr3.2:7543099-7543118 MS.gene65733:CDS 25.0%
AAAATCTGCATTTGATGAGT+TGG + chr3.2:7540115-7540134 MS.gene65733:CDS 30.0%
AAAGATCCTAAAGAACAAAG+TGG + chr3.2:7539828-7539847 MS.gene65733:CDS 30.0%
AAATCTGCATTTGATGAGTT+GGG + chr3.2:7540116-7540135 MS.gene65733:CDS 30.0%
AATAAAAGCTCCTAAAAGAC+CGG + chr3.2:7540181-7540200 MS.gene65733:CDS 30.0%
AGCAAGAATCTCTTTCTTAT+TGG - chr3.2:7540420-7540439 None:intergenic 30.0%
AGTATCACTCAGAAACAATA+AGG - chr3.2:7540692-7540711 None:intergenic 30.0%
AGTTATTGATGGAAAGTCAA+TGG + chr3.2:7542476-7542495 MS.gene65733:intron 30.0%
ATGAATTTGAAAAATGGGGA+TGG + chr3.2:7539552-7539571 MS.gene65733:CDS 30.0%
ATTCATAAGAAAGGAACTCA+TGG + chr3.2:7540026-7540045 MS.gene65733:CDS 30.0%
ATTCATTCATTCACCTAGTT+AGG - chr3.2:7541130-7541149 None:intergenic 30.0%
CATACATTCAATCAACTCAA+CGG - chr3.2:7539916-7539935 None:intergenic 30.0%
CATCTGGTGATACTTATAAA+GGG + chr3.2:7539520-7539539 MS.gene65733:CDS 30.0%
CCATCATAAAAATCACCATT+AGG - chr3.2:7539591-7539610 None:intergenic 30.0%
CTCAATATGTCATTCATAGA+CGG + chr3.2:7542186-7542205 MS.gene65733:CDS 30.0%
CTGAGCTTAATTATTGTGTT+TGG + chr3.2:7540332-7540351 MS.gene65733:intron 30.0%
GAGAAGATAGAAGGTAAAAT+AGG + chr3.2:7541312-7541331 MS.gene65733:intron 30.0%
GATAATATCATACATCTCTC+CGG - chr3.2:7543542-7543561 None:intergenic 30.0%
GATTACATGATATCGATATG+TGG + chr3.2:7541574-7541593 MS.gene65733:CDS 30.0%
GCTTAAGTTAGAATCAATTC+TGG + chr3.2:7540553-7540572 MS.gene65733:intron 30.0%
GTAGGTATCAATGGAAAAAT+GGG + chr3.2:7539643-7539662 MS.gene65733:CDS 30.0%
GTGAAAATTTGAATCAAGGA+AGG - chr3.2:7540870-7540889 None:intergenic 30.0%
GTGATACTTATAAAGGGAAT+TGG + chr3.2:7539526-7539545 MS.gene65733:CDS 30.0%
TAAGTACCACTTTGTTCTTT+AGG - chr3.2:7539837-7539856 None:intergenic 30.0%
TAAGTTAGAATCAATTCTGG+AGG + chr3.2:7540556-7540575 MS.gene65733:intron 30.0%
TCATCTGGTGATACTTATAA+AGG + chr3.2:7539519-7539538 MS.gene65733:CDS 30.0%
TCTAAATTCACAGAACATGA+GGG + chr3.2:7541490-7541509 MS.gene65733:intron 30.0%
TGAAAACTATCACATCAAAG+TGG - chr3.2:7541852-7541871 None:intergenic 30.0%
TGAGTTCCTTTCTTATGAAT+CGG - chr3.2:7540026-7540045 None:intergenic 30.0%
TGCAGTGAAAATTTGAATCA+AGG - chr3.2:7540874-7540893 None:intergenic 30.0%
TTGATCCAAAAGAGAAAGTT+TGG + chr3.2:7540980-7540999 MS.gene65733:CDS 30.0%
! AAAATCAATTCCCCAACTTT+TGG + chr3.2:7540615-7540634 MS.gene65733:intron 30.0%
! AAACGAGCACAAATTTTAGA+AGG - chr3.2:7541240-7541259 None:intergenic 30.0%
! AAAGTGAGTTCCATTTTCAT+TGG + chr3.2:7541703-7541722 MS.gene65733:intron 30.0%
! ACACTACACTTTACAAGTTT+TGG + chr3.2:7542405-7542424 MS.gene65733:intron 30.0%
! ATGGATTCAAGGTTTTACAA+TGG + chr3.2:7539407-7539426 MS.gene65733:CDS 30.0%
! ATTGAATGTCAGCAAAGTTT+TGG + chr3.2:7541103-7541122 MS.gene65733:intron 30.0%
! ATTGATGGTTGTATGTATGT+AGG + chr3.2:7539381-7539400 MS.gene65733:CDS 30.0%
! CCTAATGGTGATTTTTATGA+TGG + chr3.2:7539588-7539607 MS.gene65733:CDS 30.0%
! CTTGTTATATGCATGGTAAA+GGG + chr3.2:7539484-7539503 MS.gene65733:CDS 30.0%
! GAAAAACCGATTCATAAGAA+AGG + chr3.2:7540017-7540036 MS.gene65733:CDS 30.0%
! TAATTCAGGTGGATTCAATT+AGG + chr3.2:7543439-7543458 MS.gene65733:intron 30.0%
! TCTGATGGTAGTTTTTATGT+CGG + chr3.2:7539795-7539814 MS.gene65733:CDS 30.0%
! TGATTGAAAATATACCGACT+AGG - chr3.2:7543265-7543284 None:intergenic 30.0%
! TGGATTCAAGGTTTTACAAT+GGG + chr3.2:7539408-7539427 MS.gene65733:CDS 30.0%
! TTTTACTTCTGCTTTCTTCA+TGG - chr3.2:7541686-7541705 None:intergenic 30.0%
! TTTTTGTAGAGGACACTTAA+TGG + chr3.2:7543713-7543732 MS.gene65733:CDS 30.0%
!! AAACATATGATTGGCTTCTT+GGG + chr3.2:7542435-7542454 MS.gene65733:intron 30.0%
!! AAATAAGGCCATTTTGTTCA+CGG - chr3.2:7542767-7542786 None:intergenic 30.0%
!! ACTTGTTATATGCATGGTAA+AGG + chr3.2:7539483-7539502 MS.gene65733:CDS 30.0%
!! CTCGTTTTAAATTGCTAACA+CGG + chr3.2:7541253-7541272 MS.gene65733:intron 30.0%
!! TAAACATATGATTGGCTTCT+TGG + chr3.2:7542434-7542453 MS.gene65733:intron 30.0%
!! TTCAAGACTTGTTATATGCA+TGG + chr3.2:7539477-7539496 MS.gene65733:CDS 30.0%
!! TTTGAATTTTGATGCCACTT+TGG + chr3.2:7542824-7542843 MS.gene65733:intron 30.0%
!!! GTCTGTTTTGAAGTTATTGA+TGG + chr3.2:7542465-7542484 MS.gene65733:intron 30.0%
!!! TCATGGTTTTGATCATATAC+CGG - chr3.2:7541669-7541688 None:intergenic 30.0%
!!! TTCCTGTTAGTTTTACACAA+TGG - chr3.2:7542034-7542053 None:intergenic 30.0%
AAGAAAGGAACTCATGGTAA+TGG + chr3.2:7540032-7540051 MS.gene65733:CDS 35.0%
AAGTCAATGGTAACTTGAGT+AGG + chr3.2:7542489-7542508 MS.gene65733:intron 35.0%
AATCAGCAACTGCAAAGAAA+AGG + chr3.2:7539175-7539194 MS.gene65733:CDS 35.0%
AATGGTTCGTTTAATGGGAA+TGG + chr3.2:7539690-7539709 MS.gene65733:CDS 35.0%
ACCATTATATTGGTCAATGG+AGG + chr3.2:7539667-7539686 MS.gene65733:CDS 35.0%
AGAAAGGAACTCATGGTAAT+GGG + chr3.2:7540033-7540052 MS.gene65733:CDS 35.0%
AGGCTAAAAGTCAATTGTAG+AGG + chr3.2:7540512-7540531 MS.gene65733:intron 35.0%
AGTCAATGGTAACTTGAGTA+GGG + chr3.2:7542490-7542509 MS.gene65733:intron 35.0%
AGTGGTACTTATTATCCATC+TGG + chr3.2:7539846-7539865 MS.gene65733:CDS 35.0%
ATAAAAGCTCCTAAAAGACC+GGG + chr3.2:7540182-7540201 MS.gene65733:CDS 35.0%
ATCAGCAACTGCAAAGAAAA+GGG + chr3.2:7539176-7539195 MS.gene65733:CDS 35.0%
ATGGTCAAGGTAAGTATCTT+TGG + chr3.2:7539358-7539377 MS.gene65733:CDS 35.0%
CAAAATGGGAATAGGTATGA+TGG + chr3.2:7539726-7539745 MS.gene65733:CDS 35.0%
CAATTCAATATCTTGTCCGA+AGG - chr3.2:7539969-7539988 None:intergenic 35.0%
CATGGTAAAGGGACTTATAT+AGG + chr3.2:7539495-7539514 MS.gene65733:CDS 35.0%
CCTGTGTAAAAATCACCATT+AGG - chr3.2:7539315-7539334 None:intergenic 35.0%
CTCCATTGTGTAAAACTAAC+AGG + chr3.2:7542029-7542048 MS.gene65733:CDS 35.0%
CTGCTTATTATAAACACGTC+CGG + chr3.2:7541970-7541989 MS.gene65733:CDS 35.0%
CTTATGTTGAATCTGCAACT+AGG + chr3.2:7540239-7540258 MS.gene65733:CDS 35.0%
CTTCGGACAAGATATTGAAT+TGG + chr3.2:7539967-7539986 MS.gene65733:CDS 35.0%
GAATAGGTATGATGGTTGTT+GGG + chr3.2:7539734-7539753 MS.gene65733:CDS 35.0%
GGAACCATTATATTGGTCAA+TGG + chr3.2:7539664-7539683 MS.gene65733:CDS 35.0%
GGCATCATAGACATATTACA+AGG + chr3.2:7543571-7543590 MS.gene65733:CDS 35.0%
GGTAAGTATCTTTGGATTGA+TGG + chr3.2:7539366-7539385 MS.gene65733:CDS 35.0%
GGTAATGAGAGTTATCCTAA+TGG + chr3.2:7539573-7539592 MS.gene65733:CDS 35.0%
GGTAGGTATCAATGGAAAAA+TGG + chr3.2:7539642-7539661 MS.gene65733:CDS 35.0%
GTACAATGATGTGGCAAAAT+GGG + chr3.2:7539712-7539731 MS.gene65733:CDS 35.0%
GTCATCTTCATCATCTACAT+TGG - chr3.2:7539232-7539251 None:intergenic 35.0%
GTCTAAATTCACAGAACATG+AGG + chr3.2:7541489-7541508 MS.gene65733:intron 35.0%
GTTGAAAAGACTATGCCTAA+TGG + chr3.2:7539297-7539316 MS.gene65733:CDS 35.0%
GTTGTATGTATGTAGGTGAA+TGG + chr3.2:7539388-7539407 MS.gene65733:CDS 35.0%
TAGGAAAAACTGTATTAGGG+AGG - chr3.2:7542964-7542983 None:intergenic 35.0%
TAGTGATGCTCATCTTGAAT+GGG + chr3.2:7539872-7539891 MS.gene65733:CDS 35.0%
TATATTGGTCAATGGAGGAA+TGG + chr3.2:7539672-7539691 MS.gene65733:CDS 35.0%
TATGATGGTTGTTGGGAAAA+TGG + chr3.2:7539741-7539760 MS.gene65733:CDS 35.0%
TATGCATACCTGAATACTAC+CGG - chr3.2:7541081-7541100 None:intergenic 35.0%
TATGGACGGGAATTCAATAA+AGG - chr3.2:7542743-7542762 None:intergenic 35.0%
TCCATCTAAATTCGCATGAA+GGG - chr3.2:7541047-7541066 None:intergenic 35.0%
TCCTCCATTGACCAATATAA+TGG - chr3.2:7539671-7539690 None:intergenic 35.0%
TGCTTATTATAAACACGTCC+GGG + chr3.2:7541971-7541990 MS.gene65733:CDS 35.0%
TGGTCTTTATAATGCAATGC+AGG - chr3.2:7541882-7541901 None:intergenic 35.0%
TGTGATAGAGAGAAGATAGA+AGG + chr3.2:7541303-7541322 MS.gene65733:intron 35.0%
TTCAAATCAAGTGATGCACT+TGG - chr3.2:7540949-7540968 None:intergenic 35.0%
TTCCATCTAAATTCGCATGA+AGG - chr3.2:7541048-7541067 None:intergenic 35.0%
! ACAGTTACTGAGTTTTCATG+AGG - chr3.2:7540773-7540792 None:intergenic 35.0%
! ACTATGTTTGGTTTCGCATT+TGG - chr3.2:7540658-7540677 None:intergenic 35.0%
! ATGTATGATTTGTCCTTGTG+AGG + chr3.2:7539929-7539948 MS.gene65733:CDS 35.0%
! ATTTGTGTCATTCAACTGAG+AGG - chr3.2:7542529-7542548 None:intergenic 35.0%
! ATTTTGTTCACGGTTATGGA+CGG - chr3.2:7542757-7542776 None:intergenic 35.0%
! CATCTTCAGAGTTTTTGTAG+AGG + chr3.2:7543702-7543721 MS.gene65733:CDS 35.0%
! CCTAATGGTGATTTTTACAC+AGG + chr3.2:7539312-7539331 MS.gene65733:CDS 35.0%
! CTAGTCCAAACTTTCTCTTT+TGG - chr3.2:7540988-7541007 None:intergenic 35.0%
! GGATTCAAGGTTTTACAATG+GGG + chr3.2:7539409-7539428 MS.gene65733:CDS 35.0%
! GTGATTTTTACACAGGACAA+TGG + chr3.2:7539319-7539338 MS.gene65733:CDS 35.0%
! TATGATGGTGAGTGGAAAAA+GGG + chr3.2:7539603-7539622 MS.gene65733:CDS 35.0%
! TATGTAGGTGAATGGATTCA+AGG + chr3.2:7539396-7539415 MS.gene65733:CDS 35.0%
! TTATGATGGTGAGTGGAAAA+AGG + chr3.2:7539602-7539621 MS.gene65733:CDS 35.0%
!! GTAGTTTTTATGTCGGTGTT+TGG + chr3.2:7539802-7539821 MS.gene65733:CDS 35.0%
!! GTGATTTTTATGATGGTGAG+TGG + chr3.2:7539595-7539614 MS.gene65733:CDS 35.0%
!! TTCATGCAGACAAGTTGATA+GGG + chr3.2:7543051-7543070 MS.gene65733:intron 35.0%
!!! CTGTTAGTTTTACACAATGG+AGG - chr3.2:7542031-7542050 None:intergenic 35.0%
AAAGCTGGAATAAATCACCG+CGG + chr3.2:7540153-7540172 MS.gene65733:CDS 40.0%
ACCCTTCATGCGAATTTAGA+TGG + chr3.2:7541043-7541062 MS.gene65733:CDS 40.0%
AGATACTTACCTTGACCATG+TGG - chr3.2:7539357-7539376 None:intergenic 40.0%
ATATCATACATCTCTCCGGT+TGG - chr3.2:7543538-7543557 None:intergenic 40.0%
ATCGATATCATGTAATCGGC+AGG - chr3.2:7541571-7541590 None:intergenic 40.0%
ATCTCATCGTAGATCCTAGT+CGG + chr3.2:7543248-7543267 MS.gene65733:CDS 40.0%
ATGGACATGGTAGGTATCAA+TGG + chr3.2:7539634-7539653 MS.gene65733:CDS 40.0%
ATGGGAATGGTACAATGATG+TGG + chr3.2:7539703-7539722 MS.gene65733:CDS 40.0%
ATTGCTAACACGGAGTTGAA+AGG + chr3.2:7541263-7541282 MS.gene65733:intron 40.0%
CCTTTAGATATAGTCTCTCC+CGG - chr3.2:7540203-7540222 None:intergenic 40.0%
CCTTTATCTTCCTCTAAACC+CGG - chr3.2:7539993-7540012 None:intergenic 40.0%
CGGACGTGTTTATAATAAGC+AGG - chr3.2:7541972-7541991 None:intergenic 40.0%
CTAAACGTACCATTCCCTTT+CGG - chr3.2:7539771-7539790 None:intergenic 40.0%
CTACAGGCACACATAAATAG+TGG - chr3.2:7542377-7542396 None:intergenic 40.0%
CTAGTGATGCTCATCTTGAA+TGG + chr3.2:7539871-7539890 MS.gene65733:CDS 40.0%
CTATCAACTTGTCTGCATGA+AGG - chr3.2:7543052-7543071 None:intergenic 40.0%
CTCCATCATCGAATTCAGAT+GGG - chr3.2:7543198-7543217 None:intergenic 40.0%
GAATGGCATTGTTAAAGCCT+GGG + chr3.2:7539137-7539156 MS.gene65733:CDS 40.0%
GACAAGATATTGAATTGGCC+GGG + chr3.2:7539972-7539991 MS.gene65733:CDS 40.0%
GATAAGTTTCCACATGGTCA+AGG + chr3.2:7539345-7539364 MS.gene65733:CDS 40.0%
GGAATAGGTATGATGGTTGT+TGG + chr3.2:7539733-7539752 MS.gene65733:CDS 40.0%
GGACAAGATATTGAATTGGC+CGG + chr3.2:7539971-7539990 MS.gene65733:CDS 40.0%
GGACATTACGACATATCCTT+CGG + chr3.2:7539950-7539969 MS.gene65733:CDS 40.0%
GGAGGAATGGTTCGTTTAAT+GGG + chr3.2:7539685-7539704 MS.gene65733:CDS 40.0%
GGGACTTATATAGGTTCATC+TGG + chr3.2:7539504-7539523 MS.gene65733:CDS 40.0%
GGTACAATGATGTGGCAAAA+TGG + chr3.2:7539711-7539730 MS.gene65733:CDS 40.0%
GGTAGTATTCAGGTATGCAT+AGG + chr3.2:7541080-7541099 MS.gene65733:intron 40.0%
GTCAATGGTAACTTGAGTAG+GGG + chr3.2:7542491-7542510 MS.gene65733:intron 40.0%
GTCCATAACCGTGAACAAAA+TGG + chr3.2:7542756-7542775 MS.gene65733:intron 40.0%
GTTCCAAAGAAAAGCCAAAG+TGG - chr3.2:7542841-7542860 None:intergenic 40.0%
TAGATGGAAAGACTACTGTC+CGG + chr3.2:7541059-7541078 MS.gene65733:CDS 40.0%
TATGTCGTAATGTCCTCACA+AGG - chr3.2:7539945-7539964 None:intergenic 40.0%
TATTCTCCACTAGGGCTTTA+CGG - chr3.2:7540737-7540756 None:intergenic 40.0%
TATTTCGGTTGCAGAAGTCT+TGG + chr3.2:7542306-7542325 MS.gene65733:CDS 40.0%
TCCATCATCGAATTCAGATG+GGG - chr3.2:7543197-7543216 None:intergenic 40.0%
TCTATTTGACGAACGATGAC+CGG + chr3.2:7541647-7541666 MS.gene65733:CDS 40.0%
TGAATCTGCAACTAGGTATC+AGG + chr3.2:7540246-7540265 MS.gene65733:CDS 40.0%
TGAATGGCATTGTTAAAGCC+TGG + chr3.2:7539136-7539155 MS.gene65733:CDS 40.0%
TGATGTGGCAAAATGGGAAT+AGG + chr3.2:7539718-7539737 MS.gene65733:CDS 40.0%
TGGAGGAATGGTTCGTTTAA+TGG + chr3.2:7539684-7539703 MS.gene65733:CDS 40.0%
TGGCTTGATAAGTTTCCACA+TGG + chr3.2:7539339-7539358 MS.gene65733:CDS 40.0%
TGGTAGATCTCTTACTGTGT+TGG + chr3.2:7541452-7541471 MS.gene65733:intron 40.0%
TTTCGAGATACAAGTCCTAG+TGG + chr3.2:7543133-7543152 MS.gene65733:CDS 40.0%
! AACAGGAAGTGCACAAAAGA+AGG + chr3.2:7542046-7542065 MS.gene65733:CDS 40.0%
! AGATCCTTGAGTGTTGTTGT+TGG - chr3.2:7542272-7542291 None:intergenic 40.0%
! ATGTTTGGTTTCGCATTTGG+AGG - chr3.2:7540655-7540674 None:intergenic 40.0%
! CAAGGTTTTACAATGGGGAA+AGG + chr3.2:7539414-7539433 MS.gene65733:CDS 40.0%
! CTTAGTAATCACAGCTCTGA+AGG + chr3.2:7540086-7540105 MS.gene65733:CDS 40.0%
! GTTTTACAATGGGGAAAGGT+AGG + chr3.2:7539418-7539437 MS.gene65733:CDS 40.0%
! TCTACATTGGCTACAGACAT+TGG - chr3.2:7539219-7539238 None:intergenic 40.0%
! TGGAAAAAGGGTGTGCAAAA+TGG + chr3.2:7539615-7539634 MS.gene65733:CDS 40.0%
! TTTTCAAAGCCTCTTGTGCA+TGG + chr3.2:7541432-7541451 MS.gene65733:intron 40.0%
! TTTTGTTCACGGTTATGGAC+GGG - chr3.2:7542756-7542775 None:intergenic 40.0%
!! CATAGACGGTTTGACTTGAA+AGG + chr3.2:7542200-7542219 MS.gene65733:CDS 40.0%
!! CTTCATGCAGACAAGTTGAT+AGG + chr3.2:7543050-7543069 MS.gene65733:intron 40.0%
!! CTTGGTTCGAAGAATTTTGC+AGG + chr3.2:7542324-7542343 MS.gene65733:CDS 40.0%
!! GCAAAGTTTTGGTCCTAACT+AGG + chr3.2:7541114-7541133 MS.gene65733:intron 40.0%
!! TTTCCTAACTGTTGATTCCC+AGG - chr3.2:7539157-7539176 None:intergenic 40.0%
!!! AAAAAGCTTCCGCTTTTTCC+AGG - chr3.2:7541628-7541647 None:intergenic 40.0%
!!! ATGCCACTTTGGCTTTTCTT+TGG + chr3.2:7542835-7542854 MS.gene65733:intron 40.0%
AAGCCTGGGAATCAACAGTT+AGG + chr3.2:7539151-7539170 MS.gene65733:CDS 45.0%
AAGGGAATGGTACGTTTAGG+TGG + chr3.2:7539772-7539791 MS.gene65733:CDS 45.0%
ACACTGGTCACGAAGTTCTT+CGG + chr3.2:7542005-7542024 MS.gene65733:CDS 45.0%
ACCCCATCTGAATTCGATGA+TGG + chr3.2:7543193-7543212 MS.gene65733:CDS 45.0%
ACTACTGTCCGGTAGTATTC+AGG + chr3.2:7541070-7541089 MS.gene65733:CDS 45.0%
AGAGATCTACCATGCACAAG+AGG - chr3.2:7541444-7541463 None:intergenic 45.0%
AGAGCCAACAACAACACTCA+AGG + chr3.2:7542265-7542284 MS.gene65733:CDS 45.0%
ATTCTCCACTAGGGCTTTAC+GGG - chr3.2:7540736-7540755 None:intergenic 45.0%
ATTGAATTGGCCGGGTTTAG+AGG + chr3.2:7539980-7539999 MS.gene65733:CDS 45.0%
CACTTGTGAAAGTCCTCAGT+TGG + chr3.2:7543504-7543523 MS.gene65733:CDS 45.0%
CAGGTTCGCTTTGTCATCAT+GGG + chr3.2:7542149-7542168 MS.gene65733:intron 45.0%
CCAGTGTATTCTCAAAAGCC+CGG - chr3.2:7541992-7542011 None:intergenic 45.0%
CCGGGAGAGACTATATCTAA+AGG + chr3.2:7540200-7540219 MS.gene65733:CDS 45.0%
CCGGGTTTAGAGGAAGATAA+AGG + chr3.2:7539990-7540009 MS.gene65733:CDS 45.0%
CCTCCATCATCGAATTCAGA+TGG - chr3.2:7543199-7543218 None:intergenic 45.0%
CCTTCATATGTAGCACCACT+AGG - chr3.2:7539453-7539472 None:intergenic 45.0%
CGAAAGGGAATGGTACGTTT+AGG + chr3.2:7539769-7539788 MS.gene65733:CDS 45.0%
CTAAATTCGCATGAAGGGTG+AGG - chr3.2:7541042-7541061 None:intergenic 45.0%
CTCTCATCTCCTGGAAAAAG+CGG + chr3.2:7541616-7541635 MS.gene65733:CDS 45.0%
GACTTGAAAGGTTCGACGTT+TGG + chr3.2:7542212-7542231 MS.gene65733:CDS 45.0%
GAGGCAATTCTGTTCAAAGC+TGG + chr3.2:7540138-7540157 MS.gene65733:CDS 45.0%
GTGTGCAAAATGGACATGGT+AGG + chr3.2:7539625-7539644 MS.gene65733:CDS 45.0%
TATGTGTGCCTGTAGCATGT+AGG + chr3.2:7542382-7542401 MS.gene65733:intron 45.0%
TCAACGGCTGAGATTGAAGT+TGG - chr3.2:7543649-7543668 None:intergenic 45.0%
TCAACGGTGAAAACCTCTTG+AGG - chr3.2:7539900-7539919 None:intergenic 45.0%
TCAGGTTCGCTTTGTCATCA+TGG + chr3.2:7542148-7542167 MS.gene65733:intron 45.0%
TCTTGAATGGGATCCTCAAG+AGG + chr3.2:7539884-7539903 MS.gene65733:CDS 45.0%
TGAGCATCACTAGAACCAGA+TGG - chr3.2:7539864-7539883 None:intergenic 45.0%
TGGGGAAAGGTAGGTTTAGT+TGG + chr3.2:7539427-7539446 MS.gene65733:CDS 45.0%
TGGTCGCACTACTGATAAAC+CGG + chr3.2:7542232-7542251 MS.gene65733:CDS 45.0%
TGTAGTGTCCTACATGCTAC+AGG - chr3.2:7542393-7542412 None:intergenic 45.0%
TGTGAAAGTCCTCAGTTGGT+TGG + chr3.2:7543508-7543527 MS.gene65733:CDS 45.0%
TTTAACCCGTAAAGCCCTAG+TGG + chr3.2:7540728-7540747 MS.gene65733:intron 45.0%
! AAGGGTGTGCAAAATGGACA+TGG + chr3.2:7539621-7539640 MS.gene65733:CDS 45.0%
! AATGGTTTGCCGAAAGGGAA+TGG + chr3.2:7539759-7539778 MS.gene65733:CDS 45.0%
! ATAGTCTCTCCCGGTCTTTT+AGG - chr3.2:7540194-7540213 None:intergenic 45.0%
! CCATCTGAATTCGATGATGG+AGG + chr3.2:7543196-7543215 MS.gene65733:CDS 45.0%
! GCTTTTCCGCAAAGCCATTT+CGG - chr3.2:7543485-7543504 None:intergenic 45.0%
! GGAGCTTTTATTCTCAACCG+CGG - chr3.2:7540173-7540192 None:intergenic 45.0%
! GGGAAAATGGTTTGCCGAAA+GGG + chr3.2:7539754-7539773 MS.gene65733:CDS 45.0%
! TCTGCATTTGATGAGTTGGG+AGG + chr3.2:7540119-7540138 MS.gene65733:CDS 45.0%
! TGGACTAGATTTCCACCAGA+AGG + chr3.2:7541000-7541019 MS.gene65733:CDS 45.0%
! TGGGAAAATGGTTTGCCGAA+AGG + chr3.2:7539753-7539772 MS.gene65733:CDS 45.0%
! TTTGGTTTCGCATTTGGAGG+AGG - chr3.2:7540652-7540671 None:intergenic 45.0%
!! AGTAATCACAGCTCTGAAGG+AGG + chr3.2:7540089-7540108 MS.gene65733:CDS 45.0%
!! ATGGTAATGGGAAGCCTAGA+CGG + chr3.2:7540045-7540064 MS.gene65733:CDS 45.0%
!! CCTAGTGGTGCTACATATGA+AGG + chr3.2:7539450-7539469 MS.gene65733:CDS 45.0%
!! GGCCATTTTGTTCACGGTTA+TGG - chr3.2:7542761-7542780 None:intergenic 45.0%
AATTCGCATGAAGGGTGAGG+TGG - chr3.2:7541039-7541058 None:intergenic 50.0%
ACTTGGAGCAGGTCTTCCAA+CGG - chr3.2:7540932-7540951 None:intergenic 50.0%
AGTGGCAATGTCACACCTTG+CGG + chr3.2:7543151-7543170 MS.gene65733:CDS 50.0%
CAAGGTGTGACATTGCCACT+AGG - chr3.2:7543151-7543170 None:intergenic 50.0%
CAATCTCAGCCGTTGATCCA+AGG + chr3.2:7543653-7543672 MS.gene65733:CDS 50.0%
CCAACGGAATGTCTGTGCTA+TGG - chr3.2:7540916-7540935 None:intergenic 50.0%
CCATAGCACAGACATTCCGT+TGG + chr3.2:7540913-7540932 MS.gene65733:intron 50.0%
CGAGTACAGCCTTGGATCAA+CGG - chr3.2:7543665-7543684 None:intergenic 50.0%
CTGCATCCACTCCTGAAAGA+CGG - chr3.2:7543225-7543244 None:intergenic 50.0%
CTTCGTGAACTCTCATCTCC+TGG + chr3.2:7541607-7541626 MS.gene65733:CDS 50.0%
GGGGCTGCACGATAAATTAG+AGG + chr3.2:7540492-7540511 MS.gene65733:intron 50.0%
GGTACGTTTAGGTGGTCTGA+TGG + chr3.2:7539780-7539799 MS.gene65733:CDS 50.0%
GTATGCTTGGATCCTTCTGG+TGG - chr3.2:7541015-7541034 None:intergenic 50.0%
TCAAGTGATGCACTTGGAGC+AGG - chr3.2:7540943-7540962 None:intergenic 50.0%
TCGCACTACTGATAAACCGG+AGG + chr3.2:7542235-7542254 MS.gene65733:CDS 50.0%
TGCATCCACTCCTGAAAGAC+GGG - chr3.2:7543224-7543243 None:intergenic 50.0%
! AAGCGTTTCGAGTACAGCCT+TGG - chr3.2:7543673-7543692 None:intergenic 50.0%
! GGTAGGTTTAGTTGGCCTAG+TGG + chr3.2:7539435-7539454 MS.gene65733:CDS 50.0%
!! CCGGGCTTTTGAGAATACAC+TGG + chr3.2:7541989-7542008 MS.gene65733:CDS 50.0%
CAGTTGGTTGGCGAACCAAC+CGG + chr3.2:7543520-7543539 MS.gene65733:CDS 55.0%
CATCCACTCCTGAAAGACGG+GGG - chr3.2:7543222-7543241 None:intergenic 55.0%
CCATCAGCTGAACTCCGTCT+AGG - chr3.2:7540062-7540081 None:intergenic 55.0%
CCTAGACGGAGTTCAGCTGA+TGG + chr3.2:7540059-7540078 MS.gene65733:CDS 55.0%
GACGGAGTTCAGCTGATGGA+AGG + chr3.2:7540063-7540082 MS.gene65733:CDS 55.0%
GCATCCACTCCTGAAAGACG+GGG - chr3.2:7543223-7543242 None:intergenic 55.0%
GGCGTATGCTTGGATCCTTC+TGG - chr3.2:7541018-7541037 None:intergenic 55.0%
GTCGTCGTCGTCTTCACAAG+AGG + chr3.2:7539266-7539285 MS.gene65733:CDS 55.0%
!! GTTGGCTCTACTTCTGCCTC+CGG - chr3.2:7542254-7542273 None:intergenic 55.0%
!! GTTGGTTCGCCAACCAACTG+AGG - chr3.2:7543520-7543539 None:intergenic 55.0%
ACACCTTGCGGTCGCAGTTC+GGG + chr3.2:7543163-7543182 MS.gene65733:CDS 60.0%
AGGGTGAGGTGGCGTATGCT+TGG - chr3.2:7541028-7541047 None:intergenic 60.0%
CACACCTTGCGGTCGCAGTT+CGG + chr3.2:7543162-7543181 MS.gene65733:CDS 60.0%
! AAAGCCATTTCGGCTCGCGC+TGG - chr3.2:7543475-7543494 None:intergenic 60.0%
! CGCGAGCCGAAATGGCTTTG+CGG + chr3.2:7543476-7543495 MS.gene65733:CDS 60.0%
AGGCCCCCGTCTTTCAGGAG+TGG + chr3.2:7543216-7543235 MS.gene65733:CDS 65.0%
CATGCCAGCGCGAGCCGAAA+TGG + chr3.2:7543468-7543487 MS.gene65733:CDS 65.0%
GATGGAGGCCCCCGTCTTTC+AGG + chr3.2:7543211-7543230 MS.gene65733:CDS 65.0%
GCTCCCGAACTGCGACCGCA+AGG - chr3.2:7543169-7543188 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 7539123 7543732 7539123 ID=MS.gene65733
chr3.2 mRNA 7539123 7543732 7539123 ID=MS.gene65733.t1;Parent=MS.gene65733
chr3.2 exon 7539123 7540267 7539123 ID=MS.gene65733.t1.exon1;Parent=MS.gene65733.t1
chr3.2 CDS 7539123 7540267 7539123 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
chr3.2 exon 7540924 7541091 7540924 ID=MS.gene65733.t1.exon2;Parent=MS.gene65733.t1
chr3.2 CDS 7540924 7541091 7540924 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
chr3.2 exon 7541540 7541705 7541540 ID=MS.gene65733.t1.exon3;Parent=MS.gene65733.t1
chr3.2 CDS 7541540 7541705 7541540 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
chr3.2 exon 7541951 7542067 7541951 ID=MS.gene65733.t1.exon4;Parent=MS.gene65733.t1
chr3.2 CDS 7541951 7542067 7541951 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
chr3.2 exon 7542152 7542345 7542152 ID=MS.gene65733.t1.exon5;Parent=MS.gene65733.t1
chr3.2 CDS 7542152 7542345 7542152 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
chr3.2 exon 7543060 7543269 7543060 ID=MS.gene65733.t1.exon6;Parent=MS.gene65733.t1
chr3.2 CDS 7543060 7543269 7543060 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
chr3.2 exon 7543447 7543732 7543447 ID=MS.gene65733.t1.exon7;Parent=MS.gene65733.t1
chr3.2 CDS 7543447 7543732 7543447 ID=cds.MS.gene65733.t1;Parent=MS.gene65733.t1
Gene Sequence

>MS.gene65733

ATGAGCAGGGAGCTGAATGGCATTGTTAAAGCCTGGGAATCAACAGTTAGGAAATCAGCAACTGCAAAGAAAAGGGCAAACAGCATTTTCAAACCAATGTCTGTAGCCAATGTAGATGATGAAGATGACGACGACAAACAATCGTCGTCGTCGTCTTCACAAGAGGTAAGTCATGTTGAAAAGACTATGCCTAATGGTGATTTTTACACAGGACAATGGCTTGATAAGTTTCCACATGGTCAAGGTAAGTATCTTTGGATTGATGGTTGTATGTATGTAGGTGAATGGATTCAAGGTTTTACAATGGGGAAAGGTAGGTTTAGTTGGCCTAGTGGTGCTACATATGAAGGTGAATTCAAGACTTGTTATATGCATGGTAAAGGGACTTATATAGGTTCATCTGGTGATACTTATAAAGGGAATTGGGTTATGAATTTGAAAAATGGGGATGGTAATGAGAGTTATCCTAATGGTGATTTTTATGATGGTGAGTGGAAAAAGGGTGTGCAAAATGGACATGGTAGGTATCAATGGAAAAATGGGAACCATTATATTGGTCAATGGAGGAATGGTTCGTTTAATGGGAATGGTACAATGATGTGGCAAAATGGGAATAGGTATGATGGTTGTTGGGAAAATGGTTTGCCGAAAGGGAATGGTACGTTTAGGTGGTCTGATGGTAGTTTTTATGTCGGTGTTTGGAGTAAAGATCCTAAAGAACAAAGTGGTACTTATTATCCATCTGGTTCTAGTGATGCTCATCTTGAATGGGATCCTCAAGAGGTTTTCACCGTTGAGTTGATTGAATGTATGATTTGTCCTTGTGAGGACATTACGACATATCCTTCGGACAAGATATTGAATTGGCCGGGTTTAGAGGAAGATAAAGGAACAGAAAAACCGATTCATAAGAAAGGAACTCATGGTAATGGGAAGCCTAGACGGAGTTCAGCTGATGGAAGGCTTAGTAATCACAGCTCTGAAGGAGGTAGAAAATCTGCATTTGATGAGTTGGGAGGCAATTCTGTTCAAAGCTGGAATAAATCACCGCGGTTGAGAATAAAAGCTCCTAAAAGACCGGGAGAGACTATATCTAAAGGACATAAAAACTATGAGCTTATGTTGAATCTGCAACTAGGTATCAGGTATACTGATCAGAAAAATTGTTGTTTTCATGTATTTTGTTTACTCAGCATCTTTATTGTGTCGCTGAGCTTAATTATTGTGTTTGGTTCTGCAGTAATAGACATTGATTTTTAATGAACTGATTTTGTAAGAGATTCTTGCTATTGTACCAATAAGAAAGAGATTCTTGCTAAAAGTGAGCTGATTTTTAAGCGATTTATGTCTGAATACATGTATATAAAAGGGGGCTGCACGATAAATTAGAGGCTAAAAGTCAATTGTAGAGGCAAAAACTTCAAATTCTAGCTTAAGTTAGAATCAATTCTGGAGGCCAAATCAATTTTATTCGATAATATCAAAACATATCAAAATCAATTCCCCAACTTTTGGAATTAATTTTTCCTCCTCCAAATGCGAAACCAAACATAGTGTTTTTTTTTTCCTTATTGTTTCTGAGTGATACTTGTATTGTACTAGTATTTTAACCCGTAAAGCCCTAGTGGAGAATATATATTAAAATTTCCTCATGAAAACTCAGTAACTGTTGTAATTTGATAACATTAACACTGATAGCTATATATGGTGCAGTGATGAATTTCACATTGTAGCAAATAAATTTCCTTCCTTGATTCAAATTTTCACTGCACATTTACTAATTTCTTGTACCATAGCACAGACATTCCGTTGGAAGACCTGCTCCAAGTGCATCACTTGATTTGAAGTCTTCTGCATTTGATCCAAAAGAGAAAGTTTGGACTAGATTTCCACCAGAAGGATCCAAGCATACGCCACCTCACCCTTCATGCGAATTTAGATGGAAAGACTACTGTCCGGTAGTATTCAGGTATGCATAGGATTGAATGTCAGCAAAGTTTTGGTCCTAACTAGGTGAATGAATGAATCATGTTCTGTAACATAATCTACTAAGTGTTTACTTATTGAGAGTAACTCTTGAAATTTCTTTTCTAAAAATATTTTTCAGTTTTTCGCCTTCTAAAATTTGTGCTCGTTTTAAATTGCTAACACGGAGTTGAAAGGATGAAGTAGTGAACATTTGTGATAGAGAGAAGATAGAAGGTAAAATAGGCAGAATGCATTTTCAGAAACAACAAAAACAATGTTTTTAGTATTTTCGAAAGTTCTAAAAAATCTAGATCTGTTTTCAGAAATTGTAAAAGAAACATTTTTCAAAGCCTCTTGTGCATGGTAGATCTCTTACTGTGTTGGAATTTCATTTGTTTGTCTAAATTCACAGAACATGAGGGTGTATTTGATTGCATTTATATTTTCAGGGCTCTCAGAAAGCTGTTCAAAGTTGATCCTGCCGATTACATGATATCGATATGTGGGAATGAAGCTCTTCGTGAACTCTCATCTCCTGGAAAAAGCGGAAGCTTTTTCTATTTGACGAACGATGACCGGTATATGATCAAAACCATGAAGAAAGCAGAAGTAAAAGTGAGTTCCATTTTCATTGGCTAGATATAATATATGCCTTTTTTTTTATCAATTCTCTCATCCCTTCACTTTATAAGCTTATATAGGAACAAAAATTACGATAGATTAGAAATTTTTAAAGTTTGTCACAAATATGTATTAGACCACTTTGATGTGATAGTTTTCACATGATGCCTGCATTGCATTATAAAGACCATTAATCTACTGAATCATATTTCAATCCAAACAATATTACATGATTGCAGGTTTTTCTTAAAATGCTTCCTGCTTATTATAAACACGTCCGGGCTTTTGAGAATACACTGGTCACGAAGTTCTTCGGCCTCCATTGTGTAAAACTAACAGGAAGTGCACAAAAGAAGGTAATGTTTAGTTGTTTATAAACTTTTACTTTGGTATAAAAATAAAAAATTTATTCTTAATCAGTCACATTTCATAAATTTCAGGTTCGCTTTGTCATCATGGGAAATATATTTTGTTCTCAATATGTCATTCATAGACGGTTTGACTTGAAAGGTTCGACGTTTGGTCGCACTACTGATAAACCGGAGGCAGAAGTAGAGCCAACAACAACACTCAAGGATCTTGACTTAAATTTTATATTTCGGTTGCAGAAGTCTTGGTTCGAAGAATTTTGCAGGTGAATTTCTTGCTTAGTGCTTGTTCTGCCACTATTTATGTGTGCCTGTAGCATGTAGGACACTACACTTTACAAGTTTTGGTTTCATTAAACATATGATTGGCTTCTTGGGACAAAAAGTCTGTTTTGAAGTTATTGATGGAAAGTCAATGGTAACTTGAGTAGGGGTATTACTAGTTACCTCTCAGTTGAATGACACAAATGCAGATTTCACTAAAAAAAGTTGCGTTCTTGTATGAGCTGCATAATTGCCTGCAATTTTAAGTCATATGATTTATGAAACTAAAAATGACTTATGTGTCTTGATATTTAATATAATATAATTTAACGTTTCAAACAAGTCAGTTATACTTTTTAGAACAAAATGTTGTTTATCTTTCTAAACAACGTTGAACCTTTATTGAATTCCCGTCCATAACCGTGAACAAAATGGCCTTATTTTAGCCTTCTTTTGAAATGTAATTTATATGTCTTTACTTTTGAATTTTGATGCCACTTTGGCTTTTCTTTGGAACTTGAATGCAATTTTTGCTCACATTTAATGAATGAAAGAATTATGGTTTCACTATAAAAAGATAAAGAACCTGTTTGAAACTTTAAATATAAGTTAGAAGGCCTCCCTAATACAGTTTTTCCTATCAAATATTTGTAATTTAGTTGATCATATTTTTTTTTTTTGACGTCGGAGATATTTCTAAACATGCCTTCATGCAGACAAGTTGATAGGGACTGTGACTTTCTTCAACATGAAAGAATTATGGATTACAGTATGTTGGTTGGTCTTCACTTTCGAGATACAAGTCCTAGTGGCAATGTCACACCTTGCGGTCGCAGTTCGGGAGCTCGCACCCCATCTGAATTCGATGATGGAGGCCCCCGTCTTTCAGGAGTGGATGCAGATCATCTCATCGTAGATCCTAGTCGGTATATTTTCAATCAACTCATCTTTGCATAAGTTTTGAATATTTTTGATAACTTTAATTTTCACTGTTTACACATGAATCCAATTAGCCAAACATTAAATATTTTCTGTTATTGAACTATTTCACTTTTACATTGTTTGATTCTCATACATTTTTTGTATTGTGTATTATAATTCAGGTGGATTCAATTAGGTATAAACATGCCAGCGCGAGCCGAAATGGCTTTGCGGAAAAGCACTTGTGAAAGTCCTCAGTTGGTTGGCGAACCAACCGGAGAGATGTATGATATTATCATCTTTTTTGGCATCATAGACATATTACAAGGCTATGATATTAGTAAAAAGCTTGAGCATGCTTACAAATCAATGCAATACGATCCAACTTCAATCTCAGCCGTTGATCCAAGGCTGTACTCGAAACGCTTTCGCGATTTCATCTTCAGAGTTTTTGTAGAGGACACTTAA
Protein sequence

>MS.gene65733.t1

MSRELNGIVKAWESTVRKSATAKKRANSIFKPMSVANVDDEDDDDKQSSSSSSQEVSHVEKTMPNGDFYTGQWLDKFPHGQGKYLWIDGCMYVGEWIQGFTMGKGRFSWPSGATYEGEFKTCYMHGKGTYIGSSGDTYKGNWVMNLKNGDGNESYPNGDFYDGEWKKGVQNGHGRYQWKNGNHYIGQWRNGSFNGNGTMMWQNGNRYDGCWENGLPKGNGTFRWSDGSFYVGVWSKDPKEQSGTYYPSGSSDAHLEWDPQEVFTVELIECMICPCEDITTYPSDKILNWPGLEEDKGTEKPIHKKGTHGNGKPRRSSADGRLSNHSSEGGRKSAFDELGGNSVQSWNKSPRLRIKAPKRPGETISKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKSSAFDPKEKVWTRFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISICGNEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVFLKMLPAYYKHVRAFENTLVTKFFGLHCVKLTGSAQKKVRFVIMGNIFCSQYVIHRRFDLKGSTFGRTTDKPEAEVEPTTTLKDLDLNFIFRLQKSWFEEFCRQVDRDCDFLQHERIMDYSMLVGLHFRDTSPSGNVTPCGRSSGARTPSEFDDGGPRLSGVDADHLIVDPSRWIQLGINMPARAEMALRKSTCESPQLVGEPTGEMYDIIIFFGIIDILQGYDISKKLEHAYKSMQYDPTSISAVDPRLYSKRFRDFIFRVFVEDT