AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041118

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041118.t1 MTR_5g017790 96.520 546 19 0 1 546 1 546 0.0 1088
MS.gene041118.t1 MTR_5g017790 96.442 534 19 0 13 546 1 534 0.0 1065
MS.gene041118.t1 MTR_5g017790 95.366 410 19 0 1 410 1 410 0.0 802
MS.gene041118.t1 MTR_8g079840 67.667 600 137 8 1 546 1 597 0.0 719
MS.gene041118.t1 MTR_8g079840 65.669 501 115 8 1 447 1 498 0.0 549
MS.gene041118.t1 MTR_3g101340 54.034 533 215 13 25 544 22 537 5.39e-168 487
MS.gene041118.t1 MTR_3g101340 54.120 534 214 14 25 544 47 563 3.70e-167 486
MS.gene041118.t1 MTR_3g101340 53.235 541 215 13 25 544 47 570 1.55e-166 484
MS.gene041118.t1 MTR_1g021040 53.519 540 209 12 33 543 18 544 1.60e-160 468
MS.gene041118.t1 MTR_4g058015 32.034 590 306 16 33 544 117 689 2.97e-79 263
MS.gene041118.t1 MTR_5g079910 32.246 552 277 13 33 544 15 509 8.21e-74 243
MS.gene041118.t1 MTR_8g078760 25.662 604 358 16 10 544 39 620 1.81e-44 167
MS.gene041118.t1 MTR_5g012790 26.679 551 331 13 24 543 74 582 4.78e-42 159
MS.gene041118.t1 MTR_5g018820 24.660 588 370 10 12 544 49 618 2.36e-41 158
MS.gene041118.t1 MTR_4g068920 28.571 343 208 7 232 544 293 628 4.06e-33 134
MS.gene041118.t1 MTR_5g079910 26.598 391 195 10 33 385 15 351 1.51e-23 102
MS.gene041118.t1 MTR_8g078760 23.576 509 303 15 10 449 39 530 6.63e-23 102
MS.gene041118.t1 MTR_3g073590 30.693 202 127 6 299 494 565 759 1.12e-17 87.0
MS.gene041118.t1 MTR_5g061340 27.700 213 145 5 299 507 738 945 2.87e-17 85.9
MS.gene041118.t1 MTR_8g033290 29.143 175 117 4 332 503 418 588 4.39e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041118.t1 AT4G37080 57.718 596 189 10 6 546 23 610 0.0 620
MS.gene041118.t1 AT4G37080 57.718 596 189 10 6 546 23 610 0.0 620
MS.gene041118.t1 AT4G37080 58.136 590 184 10 12 546 16 597 0.0 619
MS.gene041118.t1 AT4G37080 55.131 497 160 10 6 447 23 511 2.93e-158 461
MS.gene041118.t1 AT5G42690 50.000 546 225 13 9 543 2 510 3.79e-151 443
MS.gene041118.t1 AT5G42690 51.243 523 210 12 32 543 49 537 6.96e-151 444
MS.gene041118.t1 AT5G42690 51.243 523 210 12 32 543 49 537 6.96e-151 444
MS.gene041118.t1 AT5G42690 51.341 522 210 12 32 543 49 536 9.43e-151 443
MS.gene041118.t1 AT5G42690 51.060 519 209 12 36 543 1 485 8.01e-149 436
MS.gene041118.t1 AT2G39690 39.755 327 160 7 249 544 96 416 4.40e-72 236
MS.gene041118.t1 AT2G39690 32.775 537 282 15 45 544 3 497 4.75e-72 239
MS.gene041118.t1 AT2G39690 32.482 548 291 15 34 544 18 523 6.66e-72 239
MS.gene041118.t1 AT2G39690 32.537 544 295 14 34 544 18 522 9.00e-72 238
MS.gene041118.t1 AT2G39690 32.833 533 286 14 45 544 3 496 1.10e-71 238
MS.gene041118.t1 AT3G12540 30.020 503 270 13 83 544 42 503 7.02e-63 214
MS.gene041118.t1 AT3G12540 29.317 556 310 14 31 544 56 570 1.19e-62 216
MS.gene041118.t1 AT5G60720 35.694 353 167 9 249 544 340 689 3.78e-56 200
MS.gene041118.t1 AT1G16750 39.615 260 142 5 295 543 271 526 5.07e-49 177
MS.gene041118.t1 AT5G47380 26.079 533 334 12 35 543 33 529 5.24e-46 169
MS.gene041118.t1 AT5G47380 26.079 533 334 12 35 543 89 585 7.06e-46 170
MS.gene041118.t1 AT5G47380 26.079 533 334 12 35 543 89 585 8.67e-46 170
MS.gene041118.t1 AT3G13000 27.368 570 308 17 35 543 20 544 2.54e-43 162
MS.gene041118.t1 AT3G13000 27.368 570 308 17 35 543 49 573 2.57e-43 163
MS.gene041118.t1 AT3G13000 27.368 570 308 17 35 543 49 573 2.57e-43 163
MS.gene041118.t1 AT2G39690 30.512 449 235 14 34 447 18 424 3.04e-40 151
MS.gene041118.t1 AT2G39690 30.562 445 239 13 34 447 18 423 4.87e-40 151
MS.gene041118.t1 AT2G23700 31.054 351 196 9 232 544 359 701 1.84e-38 150
MS.gene041118.t1 AT5G66600 25.176 568 337 16 35 544 17 554 7.69e-33 132
MS.gene041118.t1 AT5G66600 25.265 566 335 16 37 544 73 608 8.74e-33 133
MS.gene041118.t1 AT5G66600 25.265 566 335 16 37 544 73 608 8.74e-33 133
MS.gene041118.t1 AT5G66600 25.265 566 335 16 37 544 73 608 8.74e-33 133
MS.gene041118.t1 AT5G66600 25.265 566 335 16 37 544 73 608 8.74e-33 133
MS.gene041118.t1 AT5G66600 25.265 566 335 16 37 544 73 608 8.74e-33 133
MS.gene041118.t1 AT5G66600 25.265 566 335 16 37 544 53 588 1.05e-32 132
MS.gene041118.t1 AT3G18900 31.629 313 187 9 245 544 232 530 2.06e-32 131
MS.gene041118.t1 AT3G18900 31.629 313 187 9 245 544 227 525 2.35e-32 130
MS.gene041118.t1 AT3G18900 31.629 313 187 9 245 544 151 449 4.35e-32 129
MS.gene041118.t1 AT3G18900 31.629 313 187 9 245 544 151 449 4.35e-32 129
MS.gene041118.t1 AT2G39690 29.306 389 208 12 45 402 3 355 1.46e-30 123
MS.gene041118.t1 AT5G47380 25.513 439 268 11 35 450 89 491 1.16e-29 122
MS.gene041118.t1 AT5G47380 25.517 435 265 11 35 446 89 487 7.62e-29 120
MS.gene041118.t1 AT1G43020 29.450 309 183 12 248 545 151 435 1.05e-28 119
MS.gene041118.t1 AT1G76620 26.647 334 197 8 249 544 193 516 1.59e-28 119
MS.gene041118.t1 AT1G21060 27.760 317 200 7 249 546 199 505 3.86e-26 112
MS.gene041118.t1 AT1G21060 27.760 317 200 7 249 546 187 493 4.03e-26 112
MS.gene041118.t1 AT1G16750 40.323 124 72 1 283 404 259 382 1.10e-21 97.8
MS.gene041118.t1 AT5G66600 24.733 469 268 14 37 447 73 514 6.90e-20 93.6
MS.gene041118.t1 AT5G66600 24.733 469 268 14 37 447 73 514 6.90e-20 93.6
MS.gene041118.t1 AT5G66600 24.733 469 268 14 37 447 73 514 6.90e-20 93.6
MS.gene041118.t1 AT5G66600 24.733 469 268 14 37 447 73 514 6.90e-20 93.6
MS.gene041118.t1 AT4G08550 26.446 242 168 4 301 540 402 635 3.27e-19 91.7
MS.gene041118.t1 AT4G08550 26.446 242 168 4 301 540 456 689 4.38e-19 91.7
MS.gene041118.t1 AT3G11920 30.244 205 138 5 301 503 393 594 1.58e-17 86.7
MS.gene041118.t1 AT3G18900 31.776 214 126 7 245 447 232 436 6.43e-16 80.9
MS.gene041118.t1 AT1G43020 29.327 208 120 9 248 446 151 340 1.03e-15 79.3
MS.gene041118.t1 AT5G66600 24.396 414 238 12 37 399 19 408 2.59e-15 79.0
MS.gene041118.t1 AT5G66600 29.730 185 100 3 245 399 278 462 8.92e-15 77.4
MS.gene041118.t1 AT5G66600 29.730 185 100 3 245 399 278 462 8.92e-15 77.4
MS.gene041118.t1 AT5G66600 29.730 185 100 3 245 399 278 462 8.92e-15 77.4
MS.gene041118.t1 AT3G18900 32.278 158 98 3 245 399 232 383 5.04e-14 74.3
MS.gene041118.t1 AT1G76620 24.895 237 134 7 249 447 193 423 5.15e-11 65.5

Find 103 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTAGATTGTCCTTGAATA+TGG 0.203016 5.2:-9925171 None:intergenic
ACCAGGAGAAACTTGCATTT+TGG 0.212496 5.2:+9925475 MS.gene041118:CDS
TGCCCTATGATTTCAGTTTC+AGG 0.214439 5.2:+9927159 MS.gene041118:CDS
ATGAAAGCAAGAGGCATATT+TGG 0.216429 5.2:+9926201 MS.gene041118:CDS
TGGATCCTTTGATGGAATTC+TGG 0.239508 5.2:-9924672 None:intergenic
ATATCCTCTGAAACTCTATT+TGG 0.284459 5.2:-9925113 None:intergenic
CTTGGAATCTTTGTTGGATT+GGG 0.291306 5.2:+9927043 MS.gene041118:CDS
GAAATCTATTGAAAAGAAAA+TGG 0.326415 5.2:+9924849 MS.gene041118:CDS
CTTTCTACTAGAAGCACTTC+TGG 0.332145 5.2:-9924767 None:intergenic
AGCAAGAGGCATATTTGGTT+TGG 0.336129 5.2:+9926206 MS.gene041118:CDS
CTCTTCTGGTATTGAAGATA+AGG 0.350268 5.2:-9924827 None:intergenic
TGAAGATAAGGAGTCTTGTT+TGG 0.352746 5.2:-9924815 None:intergenic
TTTCAGACAAGGTTTATATC+AGG 0.354150 5.2:+9924594 MS.gene041118:CDS
AGAGCACTCACTAGACCTTT+AGG 0.357274 5.2:+9924303 MS.gene041118:CDS
TATGAGAATTTCCATATTCA+AGG 0.365612 5.2:+9925160 MS.gene041118:CDS
TTGCTTGGTGATTTCTTCAC+TGG 0.366646 5.2:-9924886 None:intergenic
AGCAAAGAGAGATTATTTAC+AGG 0.366908 5.2:+9926941 MS.gene041118:CDS
TTGATGTTTGGATCCTTTGA+TGG 0.368156 5.2:-9924680 None:intergenic
TCAACTGATTCTTGTTTGCT+TGG 0.368635 5.2:-9924901 None:intergenic
ATCAGTGCTACAACCATTTC+AGG 0.373611 5.2:-9925717 None:intergenic
AAAAGGAGGGAGCAGGAAAA+TGG 0.374679 5.2:+9924074 MS.gene041118:CDS
GCTGCCTTCCCCTTCTTTCA+AGG 0.376152 5.2:-9927112 None:intergenic
CAACCTGAAACTGAAATCAT+AGG 0.378498 5.2:-9927162 None:intergenic
ATATCGAAAACTAGAGATAT+TGG 0.379801 5.2:+9925236 MS.gene041118:CDS
AAGCAGGACAAGATGGAAAA+AGG 0.381259 5.2:+9924057 MS.gene041118:intron
CAGAGAGCACACCACTCTTC+AGG 0.383282 5.2:+9923445 MS.gene041118:CDS
ACTTGGAATCTTTGTTGGAT+TGG 0.390859 5.2:+9927042 MS.gene041118:CDS
TTTGGAATGGTCTGAACCTT+TGG 0.394809 5.2:+9926224 MS.gene041118:CDS
TCCATATTCAAGGACAATCT+AGG 0.414001 5.2:+9925170 MS.gene041118:CDS
AAAGGACTTGGAATCTTTGT+TGG 0.415429 5.2:+9927037 MS.gene041118:CDS
TGTGGCTGAAGTTGCGGTAT+TGG 0.415617 5.2:+9924534 MS.gene041118:CDS
AGGGCGTCGAGAAAGGAAAA+TGG 0.421258 5.2:+9924119 MS.gene041118:CDS
GCTTCCTTTCTCAGTTCAAC+AGG 0.438309 5.2:-9927080 None:intergenic
TGCAGATCACGTGAAGTTGC+AGG 0.442494 5.2:+9924930 MS.gene041118:CDS
CTTACATAATTCAAGTGATA+AGG 0.444130 5.2:-9926023 None:intergenic
TCCAAAATGCAAGTTTCTCC+TGG 0.448612 5.2:-9925476 None:intergenic
AAGAGAAATCTGAGGCCTAA+TGG 0.449344 5.2:-9924743 None:intergenic
ACAAAATTCATCAGACGATA+AGG 0.452744 5.2:+9925070 MS.gene041118:CDS
ATAAGGTGTTAGAAGTTGAT+AGG 0.456293 5.2:+9925087 MS.gene041118:CDS
AGCTTAATTCTACAACCATT+AGG 0.459006 5.2:+9924728 MS.gene041118:CDS
TCTAGTAGAAAGCTAGTCAA+TGG 0.462544 5.2:+9924778 MS.gene041118:CDS
TGCAGGTTGATAAGTTAAAG+AGG 0.463381 5.2:+9924241 MS.gene041118:intron
ACTTGCCTCTGTGAACTTGA+AGG 0.469270 5.2:+9925443 MS.gene041118:CDS
CAGTTGAATGCCTTGAAAGA+AGG 0.473839 5.2:+9927102 MS.gene041118:CDS
TTGCACTATCTTGTGGAAGC+TGG 0.481719 5.2:+9926253 MS.gene041118:CDS
ACTCGACTTTGCAAAGGACT+TGG 0.489476 5.2:+9927025 MS.gene041118:CDS
TTGATGGAATTCTGGTCCAT+CGG 0.493905 5.2:-9924664 None:intergenic
GGTGGTTCGATTAGAAGAGA+AGG 0.495299 5.2:+9924564 MS.gene041118:CDS
CTTACATGGGAAGGGAGATA+AGG 0.496981 5.2:-9924345 None:intergenic
TGATGGAATTCTGGTCCATC+GGG 0.498652 5.2:-9924663 None:intergenic
GTTACATTTGCACTATCTTG+TGG 0.506373 5.2:+9926246 MS.gene041118:CDS
AGTTGAATGCCTTGAAAGAA+GGG 0.509505 5.2:+9927103 MS.gene041118:CDS
CTAGTAGAAAGCTAGTCAAT+GGG 0.511137 5.2:+9924779 MS.gene041118:CDS
ACAACCATTTCAGGACTCTC+AGG 0.512777 5.2:-9925708 None:intergenic
GAGGCATATTTGGTTTGGAA+TGG 0.523893 5.2:+9926211 MS.gene041118:CDS
GGGAGATAAGGAGGAAGACG+AGG 0.525815 5.2:-9924333 None:intergenic
GCTACCTGTTGAACTGAGAA+AGG 0.530299 5.2:+9927076 MS.gene041118:CDS
CTTAATCTACTTACATGGGA+AGG 0.531642 5.2:-9924354 None:intergenic
ATGTGCAAAGCAGGACAAGA+TGG 0.532260 5.2:+9924050 MS.gene041118:intron
GATTATTTACAGGCAGCAGT+TGG 0.534652 5.2:+9926951 MS.gene041118:CDS
GATATTGAACAGATACCGTA+TGG 0.539994 5.2:-9925218 None:intergenic
TAATTCCAAAGATACTTGAC+TGG 0.540269 5.2:+9926997 MS.gene041118:CDS
GTATCTTACATTCATCATAC+AGG 0.540740 5.2:-9925514 None:intergenic
GGCTGAAGTTGCGGTATTGG+AGG 0.545349 5.2:+9924537 MS.gene041118:CDS
CATACCTGAGAGTCCTGAAA+TGG 0.549579 5.2:+9925704 MS.gene041118:CDS
CTTGAAGGGTCTTACTCACC+AGG 0.555043 5.2:+9925458 MS.gene041118:CDS
AACCTGAAACTGAAATCATA+GGG 0.561621 5.2:-9927161 None:intergenic
CGAAAATTCGATTGACCCGA+TGG 0.561722 5.2:+9924648 MS.gene041118:CDS
TTGTAGGCATATTTAGAGCA+TGG 0.564337 5.2:+9925681 MS.gene041118:intron
TGACAGGCCACAATAGTAGT+GGG 0.565218 5.2:+9925951 MS.gene041118:intron
AGAGCTTGTGGCTGAAGTTG+CGG 0.570036 5.2:+9924528 MS.gene041118:CDS
AGTTGCGGTATTGGAGGAAG+AGG 0.573287 5.2:+9924543 MS.gene041118:CDS
AGACGAGGAAGTGCTCCTAA+AGG 0.579607 5.2:-9924318 None:intergenic
TCAGTTCAACAGGTAGCTGA+AGG 0.581607 5.2:-9927070 None:intergenic
ATATGTACCATGTGTGAAAG+AGG 0.585157 5.2:-9927134 None:intergenic
CTTGCCTCTGTGAACTTGAA+GGG 0.587168 5.2:+9925444 MS.gene041118:CDS
CATTCGGTTGAAATCAACTG+TGG 0.592186 5.2:-9925291 None:intergenic
GTGACAGGCCACAATAGTAG+TGG 0.594519 5.2:+9925950 MS.gene041118:intron
TGCGGTATTGGAGGAAGAGG+TGG 0.595764 5.2:+9924546 MS.gene041118:CDS
AATGATGAGATGAAAGCAAG+AGG 0.596232 5.2:+9926192 MS.gene041118:CDS
TTAATCTACTTACATGGGAA+GGG 0.597323 5.2:-9924353 None:intergenic
GACACCAAATAGAGTTTCAG+AGG 0.605334 5.2:+9925109 MS.gene041118:CDS
CTGTCTACATTTCCTCCAAG+AGG 0.607010 5.2:+9924620 MS.gene041118:CDS
CAGATACCGTATGGATCACG+TGG 0.608890 5.2:-9925209 None:intergenic
ATGGACCAGAATTCCATCAA+AGG 0.609091 5.2:+9924667 MS.gene041118:CDS
TCAAAGGATCCAAACATCAA+AGG 0.609297 5.2:+9924683 MS.gene041118:CDS
TCGGTTGAAATCAACTGTGG+AGG 0.610634 5.2:-9925288 None:intergenic
ACACCTCCACGTGATCCATA+CGG 0.613947 5.2:+9925203 MS.gene041118:CDS
GATAGTGCAAATGTAACCAA+AGG 0.614690 5.2:-9926240 None:intergenic
ACAGGCCACAATAGTAGTGG+GGG 0.633577 5.2:+9925953 MS.gene041118:intron
TGGAAGCTGGTCATCACCCG+TGG 0.637861 5.2:+9926266 MS.gene041118:CDS
ACATGGGAAGGGAGATAAGG+AGG 0.643159 5.2:-9924342 None:intergenic
TTGATTGATTACCTGAAGAG+TGG 0.645456 5.2:-9923456 None:intergenic
AAGGTTGTGAATTTCAGACA+AGG 0.655478 5.2:+9924583 MS.gene041118:CDS
GGTTGTAGCACTGATGCAGA+AGG 0.659494 5.2:+9925725 MS.gene041118:CDS
GACAGGCCACAATAGTAGTG+GGG 0.662710 5.2:+9925952 MS.gene041118:intron
GTTGAATGCCTTGAAAGAAG+GGG 0.670351 5.2:+9927104 MS.gene041118:CDS
AATGCCTTGAAAGAAGGGGA+AGG 0.676784 5.2:+9927108 MS.gene041118:CDS
AAGGCAGCCTCTTTCACACA+TGG 0.686885 5.2:+9927127 MS.gene041118:CDS
CAGGCCACAATAGTAGTGGG+GGG 0.734448 5.2:+9925954 MS.gene041118:intron
CTTCTGGCAAGAGAAATCTG+AGG 0.757425 5.2:-9924751 None:intergenic
ATACCGTATGGATCACGTGG+AGG 0.760579 5.2:-9925206 None:intergenic
AAGACCCTTCAAGTTCACAG+AGG 0.790606 5.2:-9925448 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATCAATGTATTTATTA+AGG + chr5.2:9926827-9926846 MS.gene041118:intron 10.0%
!! AATGCTTATCTAAATATAAT+TGG - chr5.2:9925903-9925922 None:intergenic 15.0%
!! AATTGAGAAAAATAAGAAAT+TGG + chr5.2:9923844-9923863 MS.gene041118:intron 15.0%
!! ATAAAGAGAAAGAAAAAAAT+AGG - chr5.2:9923514-9923533 None:intergenic 15.0%
!! GAAAAACAAATAAAGAAAAT+TGG - chr5.2:9923539-9923558 None:intergenic 15.0%
!!! ACATTAACTATTTTCTTTTT+CGG + chr5.2:9926330-9926349 MS.gene041118:intron 15.0%
!!! ATATATGAAAATTTGTTTCA+GGG + chr5.2:9926413-9926432 MS.gene041118:intron 15.0%
!!! ATCTATCATAAATTTGTTAT+CGG + chr5.2:9926613-9926632 MS.gene041118:intron 15.0%
!!! ATTTTTATTTTATGAAGGTA+AGG + chr5.2:9926880-9926899 MS.gene041118:intron 15.0%
!!! TATATATGAAAATTTGTTTC+AGG + chr5.2:9926412-9926431 MS.gene041118:intron 15.0%
!!! TATTTTTTTCTTTCTCTTTA+TGG + chr5.2:9923513-9923532 MS.gene041118:intron 15.0%
!!! TTTTTATTTTATGAAGGTAA+GGG + chr5.2:9926881-9926900 MS.gene041118:intron 15.0%
!! AAAATTAGAAAAGTGGAAAT+TGG - chr5.2:9926758-9926777 None:intergenic 20.0%
!! ATCAAAATTCCTTCAAAAAA+CGG + chr5.2:9923474-9923493 MS.gene041118:intron 20.0%
!! CAATTATTTGGTTATATTGT+AGG + chr5.2:9925665-9925684 MS.gene041118:intron 20.0%
!! CGATTAAAGTAAGTTATAAA+GGG + chr5.2:9925338-9925357 MS.gene041118:intron 20.0%
!! GAAATCTATTGAAAAGAAAA+TGG + chr5.2:9924849-9924868 MS.gene041118:CDS 20.0%
!! TCGATTAAAGTAAGTTATAA+AGG + chr5.2:9925337-9925356 MS.gene041118:intron 20.0%
!!! AATGTATTTATTAAGGCATT+TGG + chr5.2:9926834-9926853 MS.gene041118:intron 20.0%
!!! ATTTTCATATATACTAGTCA+AGG - chr5.2:9926405-9926424 None:intergenic 20.0%
!!! CAATTTTTTTGTAGAAACTA+TGG - chr5.2:9924019-9924038 None:intergenic 20.0%
!!! CACATAATACTTTGAAAAAA+GGG + chr5.2:9924100-9924119 MS.gene041118:CDS 20.0%
!!! TCTATCATAAATTTGTTATC+GGG + chr5.2:9926614-9926633 MS.gene041118:intron 20.0%
!!! TTTCTCATGTTTTTTTTTGT+TGG + chr5.2:9923608-9923627 MS.gene041118:intron 20.0%
! AAATGAGAAAGAAAGATAGA+AGG - chr5.2:9923986-9924005 None:intergenic 25.0%
! AAGAAACAAATGACCATTTA+AGG + chr5.2:9923578-9923597 MS.gene041118:intron 25.0%
! AATAACATAGTTCTCAGATT+TGG - chr5.2:9923928-9923947 None:intergenic 25.0%
! AATCTCACAAAAACTATTGT+AGG - chr5.2:9925264-9925283 None:intergenic 25.0%
! ATAGTTATCATTCTTGATGT+GGG + chr5.2:9926797-9926816 MS.gene041118:intron 25.0%
! ATATCGAAAACTAGAGATAT+TGG + chr5.2:9925236-9925255 MS.gene041118:CDS 25.0%
! ATGCATTGAATACAATTGAT+CGG - chr5.2:9924414-9924433 None:intergenic 25.0%
! CTTACATAATTCAAGTGATA+AGG - chr5.2:9926026-9926045 None:intergenic 25.0%
! GCACATCAAATAGTAATTAT+TGG - chr5.2:9924969-9924988 None:intergenic 25.0%
! GTAGAACAATTAATAATGCA+AGG - chr5.2:9924175-9924194 None:intergenic 25.0%
! TAGATGAAAATATTGTTCTG+TGG + chr5.2:9926307-9926326 MS.gene041118:intron 25.0%
! TATGAGAATTTCCATATTCA+AGG + chr5.2:9925160-9925179 MS.gene041118:CDS 25.0%
! TCAATTGTATTCAATGCATT+TGG + chr5.2:9924415-9924434 MS.gene041118:intron 25.0%
!! GAAACACTGAATTTTTCATT+CGG - chr5.2:9925310-9925329 None:intergenic 25.0%
!! GCACATAATACTTTGAAAAA+AGG + chr5.2:9924099-9924118 MS.gene041118:CDS 25.0%
!! TGTTTTTCTGTTTGATTGTA+AGG + chr5.2:9923551-9923570 MS.gene041118:intron 25.0%
!! TTTTCAATAGATTTCTCTTC+TGG - chr5.2:9924844-9924863 None:intergenic 25.0%
!!! CTTTTTGTTGATTCTACATA+TGG + chr5.2:9925368-9925387 MS.gene041118:intron 25.0%
!!! TAAGTGTTACTTTAACAGTT+AGG + chr5.2:9923887-9923906 MS.gene041118:intron 25.0%
AAAAACCAGTCAAGTATCTT+TGG - chr5.2:9927005-9927024 None:intergenic 30.0%
AACCTGAAACTGAAATCATA+GGG - chr5.2:9927164-9927183 None:intergenic 30.0%
AAGTTTCCCAAATAAAAACC+TGG - chr5.2:9925427-9925446 None:intergenic 30.0%
ACAAAATTCATCAGACGATA+AGG + chr5.2:9925070-9925089 MS.gene041118:CDS 30.0%
AGCAAAGAGAGATTATTTAC+AGG + chr5.2:9926941-9926960 MS.gene041118:CDS 30.0%
AGCTTAATTCTACAACCATT+AGG + chr5.2:9924728-9924747 MS.gene041118:CDS 30.0%
ATTGAGAAACAAACATACCA+CGG - chr5.2:9926286-9926305 None:intergenic 30.0%
CATAGTTATCATTCTTGATG+TGG + chr5.2:9926796-9926815 MS.gene041118:intron 30.0%
CTGACTTAATCTACTTACAT+GGG - chr5.2:9924361-9924380 None:intergenic 30.0%
GAAACAAAGATGAATTGAGA+AGG - chr5.2:9925831-9925850 None:intergenic 30.0%
GATGATCACATAAGACATTA+AGG - chr5.2:9926361-9926380 None:intergenic 30.0%
GCTAGTGAAAATTAGAAAAG+TGG - chr5.2:9926765-9926784 None:intergenic 30.0%
GCTGAGAATTGAAATAATCT+AGG + chr5.2:9926455-9926474 MS.gene041118:intron 30.0%
GTAATCTACAAAGCATAACA+AGG - chr5.2:9926112-9926131 None:intergenic 30.0%
GTATCTTACATTCATCATAC+AGG - chr5.2:9925517-9925536 None:intergenic 30.0%
TAATTCCAAAGATACTTGAC+TGG + chr5.2:9926997-9927016 MS.gene041118:CDS 30.0%
TGGATATGATAAGTAAAGAC+TGG + chr5.2:9923670-9923689 MS.gene041118:intron 30.0%
TTAATCTACTTACATGGGAA+GGG - chr5.2:9924356-9924375 None:intergenic 30.0%
TTGAGGTGACTACAATTATT+TGG + chr5.2:9925653-9925672 MS.gene041118:intron 30.0%
TTTCAGACAAGGTTTATATC+AGG + chr5.2:9924594-9924613 MS.gene041118:CDS 30.0%
! AAATGACCATTTAAGGTTGT+TGG + chr5.2:9923585-9923604 MS.gene041118:intron 30.0%
! ACTGACTTAATCTACTTACA+TGG - chr5.2:9924362-9924381 None:intergenic 30.0%
! ATAAGGTGTTAGAAGTTGAT+AGG + chr5.2:9925087-9925106 MS.gene041118:CDS 30.0%
! ATTGACATGAATGGATTTCT+TGG + chr5.2:9925859-9925878 MS.gene041118:intron 30.0%
! ATTTTAGACATTAGAGCTTG+TGG + chr5.2:9924516-9924535 MS.gene041118:intron 30.0%
! CAAGTTACAAGTCAGTTTTT+AGG - chr5.2:9926549-9926568 None:intergenic 30.0%
! CTAAAAGAGTTGTCTTTTTG+AGG + chr5.2:9925579-9925598 MS.gene041118:intron 30.0%
! CTTTTCTAATTTTCACTAGC+AGG + chr5.2:9926765-9926784 MS.gene041118:intron 30.0%
!! AAACTGACTTGTAACTTGTA+AGG + chr5.2:9926551-9926570 MS.gene041118:intron 30.0%
!! ACATGTCCAGGTTTTTATTT+GGG + chr5.2:9925418-9925437 MS.gene041118:intron 30.0%
!! ATATCCTCTGAAACTCTATT+TGG - chr5.2:9925116-9925135 None:intergenic 30.0%
!! TGATTTTGACCTTTGATGTT+TGG - chr5.2:9924695-9924714 None:intergenic 30.0%
!! TTTTGTTTCGATTAATCAGC+TGG + chr5.2:9925019-9925038 MS.gene041118:intron 30.0%
!!! AACCACTTGGTTTTGAATAT+AGG + chr5.2:9923777-9923796 MS.gene041118:intron 30.0%
!!! AATAGTTTGCCGTTTTTTGA+AGG - chr5.2:9923486-9923505 None:intergenic 30.0%
!!! ATTTTTTGCAGCTTTTAGAC+AGG - chr5.2:9926175-9926194 None:intergenic 30.0%
!!! TTTTTGTTGGTTTTACCCTT+CGG + chr5.2:9923621-9923640 MS.gene041118:intron 30.0%
AAAGGACTTGGAATCTTTGT+TGG + chr5.2:9927037-9927056 MS.gene041118:CDS 35.0%
AAGGTTGTGAATTTCAGACA+AGG + chr5.2:9924583-9924602 MS.gene041118:CDS 35.0%
AATGATGAGATGAAAGCAAG+AGG + chr5.2:9926192-9926211 MS.gene041118:CDS 35.0%
ACAAAAGCTGAGAACATTAG+AGG - chr5.2:9925761-9925780 None:intergenic 35.0%
ACTACTTAAGTCTAACCACT+TGG + chr5.2:9923764-9923783 MS.gene041118:intron 35.0%
ACTTGGAATCTTTGTTGGAT+TGG + chr5.2:9927042-9927061 MS.gene041118:CDS 35.0%
AGCCTATATTCAAAACCAAG+TGG - chr5.2:9923782-9923801 None:intergenic 35.0%
AGTTGAATGCCTTGAAAGAA+GGG + chr5.2:9927103-9927122 MS.gene041118:CDS 35.0%
ATATGTACCATGTGTGAAAG+AGG - chr5.2:9927137-9927156 None:intergenic 35.0%
ATTCACTACTTGTCACTACA+AGG + chr5.2:9925551-9925570 MS.gene041118:intron 35.0%
CAAAAGCTGAGAACATTAGA+GGG - chr5.2:9925760-9925779 None:intergenic 35.0%
CAACCTGAAACTGAAATCAT+AGG - chr5.2:9927165-9927184 None:intergenic 35.0%
CCATCACATATTGACATGAA+TGG + chr5.2:9925850-9925869 MS.gene041118:intron 35.0%
CCATTCATGTCAATATGTGA+TGG - chr5.2:9925853-9925872 None:intergenic 35.0%
CCTATGATACCAAACAAAAC+CGG - chr5.2:9926691-9926710 None:intergenic 35.0%
CTAATCTAAAAGACATGTCC+AGG + chr5.2:9925406-9925425 MS.gene041118:intron 35.0%
CTAGTAGAAAGCTAGTCAAT+GGG + chr5.2:9924779-9924798 MS.gene041118:CDS 35.0%
CTTAATCTACTTACATGGGA+AGG - chr5.2:9924357-9924376 None:intergenic 35.0%
CTTGGAATCTTTGTTGGATT+GGG + chr5.2:9927043-9927062 MS.gene041118:CDS 35.0%
GAGAAACCAACAACCTTAAA+TGG - chr5.2:9923594-9923613 None:intergenic 35.0%
GAGAAAGAAAGATAGAAGGA+AGG - chr5.2:9923982-9924001 None:intergenic 35.0%
GATAGTGCAAATGTAACCAA+AGG - chr5.2:9926243-9926262 None:intergenic 35.0%
GATATTGAACAGATACCGTA+TGG - chr5.2:9925221-9925240 None:intergenic 35.0%
GTTACATTTGCACTATCTTG+TGG + chr5.2:9926246-9926265 MS.gene041118:CDS 35.0%
TCAAAGGATCCAAACATCAA+AGG + chr5.2:9924683-9924702 MS.gene041118:CDS 35.0%
TCCATATTCAAGGACAATCT+AGG + chr5.2:9925170-9925189 MS.gene041118:CDS 35.0%
TCCTAGATTGTCCTTGAATA+TGG - chr5.2:9925174-9925193 None:intergenic 35.0%
TCTAGTAGAAAGCTAGTCAA+TGG + chr5.2:9924778-9924797 MS.gene041118:CDS 35.0%
TGTAGTCACCTCAACATATT+AGG - chr5.2:9925647-9925666 None:intergenic 35.0%
TTACCTTGCCTAATATGTTG+AGG + chr5.2:9925636-9925655 MS.gene041118:intron 35.0%
TTAGGTCATATCTCAAGTGA+AGG - chr5.2:9926531-9926550 None:intergenic 35.0%
TTGAGAAACAAACATACCAC+GGG - chr5.2:9926285-9926304 None:intergenic 35.0%
TTGATGTTTGGATCCTTTGA+TGG - chr5.2:9924683-9924702 None:intergenic 35.0%
TTGATTGATTACCTGAAGAG+TGG - chr5.2:9923459-9923478 None:intergenic 35.0%
! AAGGCATTTGGTTGAATTGA+TGG + chr5.2:9926846-9926865 MS.gene041118:intron 35.0%
! ATGAAAGCAAGAGGCATATT+TGG + chr5.2:9926201-9926220 MS.gene041118:CDS 35.0%
! CTCTTCTGGTATTGAAGATA+AGG - chr5.2:9924830-9924849 None:intergenic 35.0%
! GACATGTCCAGGTTTTTATT+TGG + chr5.2:9925417-9925436 MS.gene041118:intron 35.0%
! GTTTTTACTCGACTTTGCAA+AGG + chr5.2:9927019-9927038 MS.gene041118:CDS 35.0%
! TCAACTGATTCTTGTTTGCT+TGG - chr5.2:9924904-9924923 None:intergenic 35.0%
! TGTTTCAGGGTGTTATGTAA+TGG + chr5.2:9926426-9926445 MS.gene041118:intron 35.0%
! TTGTAGGCATATTTAGAGCA+TGG + chr5.2:9925681-9925700 MS.gene041118:intron 35.0%
!! AACTTGGTAATGTTTGTGAC+AGG + chr5.2:9925935-9925954 MS.gene041118:intron 35.0%
!! CATTCGAGTTGACTAAAACT+TGG + chr5.2:9925919-9925938 MS.gene041118:intron 35.0%
!! TGAAGATAAGGAGTCTTGTT+TGG - chr5.2:9924818-9924837 None:intergenic 35.0%
!! TGCAGGTTGATAAGTTAAAG+AGG + chr5.2:9924241-9924260 MS.gene041118:intron 35.0%
!!! CTTATTTTGATCCTACAAGC+CGG + chr5.2:9926669-9926688 MS.gene041118:intron 35.0%
AAGCAGGACAAGATGGAAAA+AGG + chr5.2:9924057-9924076 MS.gene041118:intron 40.0%
AGGACAAGATGGAAAAAGGA+GGG + chr5.2:9924061-9924080 MS.gene041118:intron 40.0%
AGTCTAAACTTGCGTACTTG+TGG + chr5.2:9923713-9923732 MS.gene041118:intron 40.0%
ATCAGTGCTACAACCATTTC+AGG - chr5.2:9925720-9925739 None:intergenic 40.0%
ATGGACCAGAATTCCATCAA+AGG + chr5.2:9924667-9924686 MS.gene041118:CDS 40.0%
ATTACGAGAGTCCAATTCCT+CGG - chr5.2:9923649-9923668 None:intergenic 40.0%
ATTATCCAGCAAGGTACAGT+AGG + chr5.2:9926645-9926664 MS.gene041118:intron 40.0%
CAGTTGAATGCCTTGAAAGA+AGG + chr5.2:9927102-9927121 MS.gene041118:CDS 40.0%
CATTCGGTTGAAATCAACTG+TGG - chr5.2:9925294-9925313 None:intergenic 40.0%
GACACCAAATAGAGTTTCAG+AGG + chr5.2:9925109-9925128 MS.gene041118:CDS 40.0%
GATTATTTACAGGCAGCAGT+TGG + chr5.2:9926951-9926970 MS.gene041118:CDS 40.0%
GGAATTGGACTCTCGTAATT+TGG + chr5.2:9923650-9923669 MS.gene041118:intron 40.0%
GTTGAATGCCTTGAAAGAAG+GGG + chr5.2:9927104-9927123 MS.gene041118:CDS 40.0%
TCACCTCAACATATTAGGCA+AGG - chr5.2:9925642-9925661 None:intergenic 40.0%
TCCAAAATGCAAGTTTCTCC+TGG - chr5.2:9925479-9925498 None:intergenic 40.0%
TCTCAAGTGAAGGTGAGATT+TGG - chr5.2:9926521-9926540 None:intergenic 40.0%
TCTCACTTAATGTGCAAAGC+AGG + chr5.2:9924041-9924060 MS.gene041118:intron 40.0%
TGCCCTATGATTTCAGTTTC+AGG + chr5.2:9927159-9927178 MS.gene041118:CDS 40.0%
TGGATCCTTTGATGGAATTC+TGG - chr5.2:9924675-9924694 None:intergenic 40.0%
TTATCCAGCAAGGTACAGTA+GGG + chr5.2:9926646-9926665 MS.gene041118:intron 40.0%
TTGATGGAATTCTGGTCCAT+CGG - chr5.2:9924667-9924686 None:intergenic 40.0%
! AAGAGAAATCTGAGGCCTAA+TGG - chr5.2:9924746-9924765 None:intergenic 40.0%
! ACCAGGAGAAACTTGCATTT+TGG + chr5.2:9925475-9925494 MS.gene041118:CDS 40.0%
! AGCAAGAGGCATATTTGGTT+TGG + chr5.2:9926206-9926225 MS.gene041118:CDS 40.0%
! CATCGGGTCAATCGAATTTT+CGG - chr5.2:9924650-9924669 None:intergenic 40.0%
! TTATGCTGCTTGAAGTTTGC+AGG + chr5.2:9924224-9924243 MS.gene041118:intron 40.0%
! TTGCTTGGTGATTTCTTCAC+TGG - chr5.2:9924889-9924908 None:intergenic 40.0%
! TTTGGAATGGTCTGAACCTT+TGG + chr5.2:9926224-9926243 MS.gene041118:CDS 40.0%
!! AAATTTGTTATCGGGCCACT+CGG + chr5.2:9926622-9926641 MS.gene041118:intron 40.0%
!! CTTTCTACTAGAAGCACTTC+TGG - chr5.2:9924770-9924789 None:intergenic 40.0%
!! GAGGCATATTTGGTTTGGAA+TGG + chr5.2:9926211-9926230 MS.gene041118:CDS 40.0%
!!! CCGGTTTTGTTTGGTATCAT+AGG + chr5.2:9926688-9926707 MS.gene041118:intron 40.0%
AAAAGGAGGGAGCAGGAAAA+TGG + chr5.2:9924074-9924093 MS.gene041118:CDS 45.0%
AAGCGCTAAGCATAACTGTG+TGG + chr5.2:9926485-9926504 MS.gene041118:intron 45.0%
AATGCCTTGAAAGAAGGGGA+AGG + chr5.2:9927108-9927127 MS.gene041118:CDS 45.0%
ACAACCATTTCAGGACTCTC+AGG - chr5.2:9925711-9925730 None:intergenic 45.0%
ACTCGACTTTGCAAAGGACT+TGG + chr5.2:9927025-9927044 MS.gene041118:CDS 45.0%
ACTTGCCTCTGTGAACTTGA+AGG + chr5.2:9925443-9925462 MS.gene041118:CDS 45.0%
ATGTGCAAAGCAGGACAAGA+TGG + chr5.2:9924050-9924069 MS.gene041118:intron 45.0%
CAGGACAAGATGGAAAAAGG+AGG + chr5.2:9924060-9924079 MS.gene041118:intron 45.0%
CATACCTGAGAGTCCTGAAA+TGG + chr5.2:9925704-9925723 MS.gene041118:CDS 45.0%
CGAAAATTCGATTGACCCGA+TGG + chr5.2:9924648-9924667 MS.gene041118:CDS 45.0%
CTGTCTACATTTCCTCCAAG+AGG + chr5.2:9924620-9924639 MS.gene041118:CDS 45.0%
CTTACATGGGAAGGGAGATA+AGG - chr5.2:9924348-9924367 None:intergenic 45.0%
CTTCTGGCAAGAGAAATCTG+AGG - chr5.2:9924754-9924773 None:intergenic 45.0%
CTTGCCTCTGTGAACTTGAA+GGG + chr5.2:9925444-9925463 MS.gene041118:CDS 45.0%
GCTACCTGTTGAACTGAGAA+AGG + chr5.2:9927076-9927095 MS.gene041118:CDS 45.0%
GCTTCCTTTCTCAGTTCAAC+AGG - chr5.2:9927083-9927102 None:intergenic 45.0%
GGTGGTTCGATTAGAAGAGA+AGG + chr5.2:9924564-9924583 MS.gene041118:CDS 45.0%
TCAGTTCAACAGGTAGCTGA+AGG - chr5.2:9927073-9927092 None:intergenic 45.0%
TCGGTTGAAATCAACTGTGG+AGG - chr5.2:9925291-9925310 None:intergenic 45.0%
TGACAGGCCACAATAGTAGT+GGG + chr5.2:9925951-9925970 MS.gene041118:intron 45.0%
TGATGGAATTCTGGTCCATC+GGG - chr5.2:9924666-9924685 None:intergenic 45.0%
TTACGAGAGTCCAATTCCTC+GGG - chr5.2:9923648-9923667 None:intergenic 45.0%
TTGCACTATCTTGTGGAAGC+TGG + chr5.2:9926253-9926272 MS.gene041118:CDS 45.0%
! AAGACCCTTCAAGTTCACAG+AGG - chr5.2:9925451-9925470 None:intergenic 45.0%
! AGAGCACTCACTAGACCTTT+AGG + chr5.2:9924303-9924322 MS.gene041118:CDS 45.0%
! ATTTTCGGCATTCCTCTTGG+AGG - chr5.2:9924635-9924654 None:intergenic 45.0%
! CGAATTTTCGGCATTCCTCT+TGG - chr5.2:9924638-9924657 None:intergenic 45.0%
! CTTTTAGACAGGTCTGTTGC+AGG - chr5.2:9926164-9926183 None:intergenic 45.0%
!! ACCAAACAAAACCGGCTTGT+AGG - chr5.2:9926683-9926702 None:intergenic 45.0%
!! TGAAAAAAGGGCGTCGAGAA+AGG + chr5.2:9924112-9924131 MS.gene041118:CDS 45.0%
!!! TCCTACAAGCCGGTTTTGTT+TGG + chr5.2:9926679-9926698 MS.gene041118:intron 45.0%
!!! TATATATTTTTATTTTATGA+AGG + chr5.2:9926875-9926894 MS.gene041118:intron 5.0%
AAGGCAGCCTCTTTCACACA+TGG + chr5.2:9927127-9927146 MS.gene041118:CDS 50.0%
ACACCTCCACGTGATCCATA+CGG + chr5.2:9925203-9925222 MS.gene041118:CDS 50.0%
ACAGGCCACAATAGTAGTGG+GGG + chr5.2:9925953-9925972 MS.gene041118:intron 50.0%
ACATGGGAAGGGAGATAAGG+AGG - chr5.2:9924345-9924364 None:intergenic 50.0%
ACCTTGCTGGATAATCCGAG+TGG - chr5.2:9926640-9926659 None:intergenic 50.0%
AGAGCTTGTGGCTGAAGTTG+CGG + chr5.2:9924528-9924547 MS.gene041118:CDS 50.0%
AGATGGAAAAAGGAGGGAGC+AGG + chr5.2:9924067-9924086 MS.gene041118:CDS 50.0%
ATACCGTATGGATCACGTGG+AGG - chr5.2:9925209-9925228 None:intergenic 50.0%
CAGATACCGTATGGATCACG+TGG - chr5.2:9925212-9925231 None:intergenic 50.0%
CTTGAAGGGTCTTACTCACC+AGG + chr5.2:9925458-9925477 MS.gene041118:CDS 50.0%
GACAGGCCACAATAGTAGTG+GGG + chr5.2:9925952-9925971 MS.gene041118:intron 50.0%
GTGACAGGCCACAATAGTAG+TGG + chr5.2:9925950-9925969 MS.gene041118:intron 50.0%
TAAGCCCTACTGTACCTTGC+TGG - chr5.2:9926653-9926672 None:intergenic 50.0%
TGCAGATCACGTGAAGTTGC+AGG + chr5.2:9924930-9924949 MS.gene041118:CDS 50.0%
TGTGGCTGAAGTTGCGGTAT+TGG + chr5.2:9924534-9924553 MS.gene041118:CDS 50.0%
! AGTTGCGGTATTGGAGGAAG+AGG + chr5.2:9924543-9924562 MS.gene041118:CDS 50.0%
!! AGACGAGGAAGTGCTCCTAA+AGG - chr5.2:9924321-9924340 None:intergenic 50.0%
!! AGGGCGTCGAGAAAGGAAAA+TGG + chr5.2:9924119-9924138 MS.gene041118:CDS 50.0%
!! GGTTGTAGCACTGATGCAGA+AGG + chr5.2:9925725-9925744 MS.gene041118:CDS 50.0%
GCCACTCGGATTATCCAGCA+AGG + chr5.2:9926636-9926655 MS.gene041118:intron 55.0%
GCTGCCTTCCCCTTCTTTCA+AGG - chr5.2:9927115-9927134 None:intergenic 55.0%
GGGAGATAAGGAGGAAGACG+AGG - chr5.2:9924336-9924355 None:intergenic 55.0%
GTGTCCCCCCACTACTATTG+TGG - chr5.2:9925961-9925980 None:intergenic 55.0%
TCCAATTCCTCGGGACCGAA+GGG - chr5.2:9923639-9923658 None:intergenic 55.0%
! CAGAGAGCACACCACTCTTC+AGG + chr5.2:9923445-9923464 MS.gene041118:CDS 55.0%
! CAGGCCACAATAGTAGTGGG+GGG + chr5.2:9925954-9925973 MS.gene041118:intron 55.0%
! GGCTGAAGTTGCGGTATTGG+AGG + chr5.2:9924537-9924556 MS.gene041118:CDS 55.0%
! TGCGGTATTGGAGGAAGAGG+TGG + chr5.2:9924546-9924565 MS.gene041118:CDS 55.0%
ACCCTTCGGTCCCGAGGAAT+TGG + chr5.2:9923635-9923654 MS.gene041118:intron 60.0%
AGTGGGGGGACACTTGCTCA+AGG + chr5.2:9925968-9925987 MS.gene041118:CDS 60.0%
GTCCAATTCCTCGGGACCGA+AGG - chr5.2:9923640-9923659 None:intergenic 60.0%
TGGAAGCTGGTCATCACCCG+TGG + chr5.2:9926266-9926285 MS.gene041118:CDS 60.0%
! GGTTTTACCCTTCGGTCCCG+AGG + chr5.2:9923629-9923648 MS.gene041118:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 9923437 9927199 9923437 ID=MS.gene041118
chr5.2 mRNA 9923437 9927199 9923437 ID=MS.gene041118.t1;Parent=MS.gene041118
chr5.2 exon 9923437 9923466 9923437 ID=MS.gene041118.t1.exon1;Parent=MS.gene041118.t1
chr5.2 CDS 9923437 9923466 9923437 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9924063 9924155 9924063 ID=MS.gene041118.t1.exon2;Parent=MS.gene041118.t1
chr5.2 CDS 9924063 9924155 9924063 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9924246 9924362 9924246 ID=MS.gene041118.t1.exon3;Parent=MS.gene041118.t1
chr5.2 CDS 9924246 9924362 9924246 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9924523 9924951 9924523 ID=MS.gene041118.t1.exon4;Parent=MS.gene041118.t1
chr5.2 CDS 9924523 9924951 9924523 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9925038 9925345 9925038 ID=MS.gene041118.t1.exon5;Parent=MS.gene041118.t1
chr5.2 CDS 9925038 9925345 9925038 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9925428 9925527 9925428 ID=MS.gene041118.t1.exon6;Parent=MS.gene041118.t1
chr5.2 CDS 9925428 9925527 9925428 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9925687 9925746 9925687 ID=MS.gene041118.t1.exon7;Parent=MS.gene041118.t1
chr5.2 CDS 9925687 9925746 9925687 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9925957 9926040 9925957 ID=MS.gene041118.t1.exon8;Parent=MS.gene041118.t1
chr5.2 CDS 9925957 9926040 9925957 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9926171 9926287 9926171 ID=MS.gene041118.t1.exon9;Parent=MS.gene041118.t1
chr5.2 CDS 9926171 9926287 9926171 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
chr5.2 exon 9926897 9927199 9926897 ID=MS.gene041118.t1.exon10;Parent=MS.gene041118.t1
chr5.2 CDS 9926897 9927199 9926897 ID=cds.MS.gene041118.t1;Parent=MS.gene041118.t1
Gene Sequence

>MS.gene041118

ATGAGTAGCAGAGAGCACACCACTCTTCAGGTAATCAATCAAAATTCCTTCAAAAAACGGCAAACTATTTTCTTCCTATTTTTTTCTTTCTCTTTATGGCCAATTTTCTTTATTTGTTTTTCTGTTTGATTGTAAGGTCTTAAGAAACAAATGACCATTTAAGGTTGTTGGTTTCTCATGTTTTTTTTTGTTGGTTTTACCCTTCGGTCCCGAGGAATTGGACTCTCGTAATTTGGATATGATAAGTAAAGACTGGTCAAAGATTATTCATGCTATAGTCTAAACTTGCGTACTTGTGGTCAATTTGACTTTCACTGAAACTCATCGACTACTTAAGTCTAACCACTTGGTTTTGAATATAGGCTTCTCATGAAAATTAAGCTATGTAACATAAAATCTCTTAGAAAAATTGAGAAAAATAAGAAATTGGTTTAAAAGCATAACATAAACTAAGTGTTACTTTAACAGTTAGGAATGATGTTTTAATTCCAAATCTGAGAACTATGTTATTTCACTTCTCATGAGAAACAAATAGTCTCTGTCCTTCCTTCTATCTTTCTTTCTCATTTCATACAAAAACCATAGTTTCTACAAAAAAATTGTTTCTCACTTAATGTGCAAAGCAGGACAAGATGGAAAAAGGAGGGAGCAGGAAAATGGCTGCACATAATACTTTGAAAAAAGGGCGTCGAGAAAGGAAAATGGCTTTGATACAAGATGTGAGTGTAACATATACCTTGCATTATTAATTGTTCTACACATTATTTGTAATTTTTCAGTGTATTTATTATGCTGCTTGAAGTTTGCAGGTTGATAAGTTAAAGAGGAAGCTAAGACATGAAGAGAATGTTCATAGAGTGTTAGAAAGAGCACTCACTAGACCTTTAGGAGCACTTCCTCGTCTTCCTCCTTATCTCCCTTCCCATGTAAGTAGATTAAGTCAGTGATCGATCAATTGTATTCACTATATCTCACCGATCAATTGTATTCAATGCATTTGGTATATATCTTAATTAGAATTAAGTTTTTGATCTTTGATATCTATAGATATCGAAAGTAAGAAAAACTGTGTATTGTGTATTTTAGACATTAGAGCTTGTGGCTGAAGTTGCGGTATTGGAGGAAGAGGTGGTTCGATTAGAAGAGAAGGTTGTGAATTTCAGACAAGGTTTATATCAGGAAGCTGTCTACATTTCCTCCAAGAGGAATGCCGAAAATTCGATTGACCCGATGGACCAGAATTCCATCAAAGGATCCAAACATCAAAGGTCAAAATCATTGTCTCAAAGTGAGCTTAATTCTACAACCATTAGGCCTCAGATTTCTCTTGCCAGAAGTGCTTCTAGTAGAAAGCTAGTCAATGGGAAGCAATTGCATTCCAAACAAGACTCCTTATCTTCAATACCAGAAGAGAAATCTATTGAAAAGAAAATGGCTAAAGTCATCACTCCAGTGAAGAAATCACCAAGCAAACAAGAATCAGTTGACAAGTGTGCAGATCACGTGAAGTTGCAGGTACTTAACAATTTCCAATAATTACTATTTGATGTGCGAAACAATTAAGCTGTCATTTCAGAAATCATTTTGTTTCGATTAATCAGCTGGAGAAGAGATTAGTAGATCAAGAAAGAGCACAAAATTCATCAGACGATAAGGTGTTAGAAGTTGATAGGACACCAAATAGAGTTTCAGAGGATATAGTCAAGTGTTTGTGTAGCATATTTATGAGAATTTCCATATTCAAGGACAATCTAGGAGAATCGAAAACACCTCCACGTGATCCATACGGTATCTGTTCAATATCGAAAACTAGAGATATTGGTGCCTACAATAGTTTTTGTGAGATTGAAGCCTCCACAGTTGATTTCAACCGAATGAAAAATTCAGTGTTTCTCATCAATCGATTAAAGTAAGTTATAAAGGGTTATTAACTTTTTGTTGATTCTACATATGGACTATGAGTGTCTGTCTAATCTAAAAGACATGTCCAGGTTTTTATTTGGGAAACTTGCCTCTGTGAACTTGAAGGGTCTTACTCACCAGGAGAAACTTGCATTTTGGATAAACACTTATAATTCCTGTATGATGAATGTAAGATACTTTTTCTGTCACTCATTCACTACTTGTCACTACAAGGCAAAACTAAAAGAGTTGTCTTTTTGAGGTCTATTTTTATATTTGATGTCACATACACTCACATTACCTTGCCTAATATGTTGAGGTGACTACAATTATTTGGTTATATTGTAGGCATATTTAGAGCATGGCATACCTGAGAGTCCTGAAATGGTTGTAGCACTGATGCAGAAGGTACAATAATCCCTCTAATGTTCTCAGCTTTTGTTTTTGTTTTAAGAACAAATTATTCAGAGCACAAAAACTATCGTTGTTCCTTCTCAATTCATCTTTGTTTCCATCACATATTGACATGAATGGATTTCTTGGTACTCTTCTTTCTAACTTCCAATTATATTTAGATAAGCATTCGAGTTGACTAAAACTTGGTAATGTTTGTGACAGGCCACAATAGTAGTGGGGGGACACTTGCTCAAGGCAATGACTATAGAGCACTTCATCTTGAGACTTCCTTATCACTTGAATTATGTAAGTTCATAATCTACTATCTGCTTGTGCTAAACATGATCATTTTTTATTTTTTTATTTTTTGAAGTCCTTGTTATGCTTTGTAGATTACAATTCATCTCTTGATTTTCATCTTTGCTTCCTGCAACAGACCTGTCTAAAAGCTGCAAAAAATGATGAGATGAAAGCAAGAGGCATATTTGGTTTGGAATGGTCTGAACCTTTGGTTACATTTGCACTATCTTGTGGAAGCTGGTCATCACCCGTGGTATGTTTGTTTCTCAATTTAGATGAAAATATTGTTCTGTGGACATTAACTATTTTCTTTTTCGGATATGCCTTAATGTCTTATGTGATCATCTAGTCTGACAATATATGATTTCCTTGACTAGTATATATGAAAATTTGTTTCAGGGTGTTATGTAATGGTTAGATGCTGAGAATTGAAATAATCTAGGATAGATTAAGCGCTAAGCATAACTGTGTGGAGAAAATAATCCAAATCTCACCTTCACTTGAGATATGACCTAAAAACTGACTTGTAACTTGTAAGGTAATGACTGAGTTAGTTTCAAAACTTAAGATGTATTGTAATCTATCATAAATTTGTTATCGGGCCACTCGGATTATCCAGCAAGGTACAGTAGGGCTTATTTTGATCCTACAAGCCGGTTTTGTTTGGTATCATAGGAGACTCATCATTATGATACAAAATTAAACATAGTGAAAAGCTTTCCAATTTCCACTTTTCTAATTTTCACTAGCAGGATCAGTTACATAGTTATCATTCTTGATGTGGGTGAAATCATAAATCAATGTATTTATTAAGGCATTTGGTTGAATTGATGGAACAAATATATATTTTTATTTTATGAAGGTAAGGGTGTACACAGCATCACAAGTTGATAATGAGTTAGAAGCAGCAAAGAGAGATTATTTACAGGCAGCAGTTGGCATTACAAAAACAAATAAGTTAATAATTCCAAAGATACTTGACTGGTTTTTACTCGACTTTGCAAAGGACTTGGAATCTTTGTTGGATTGGGTCTGCCTTCAGCTACCTGTTGAACTGAGAAAGGAAGCAGTTGAATGCCTTGAAAGAAGGGGAAGGCAGCCTCTTTCACACATGGTACATATGATGCCCTATGATTTCAGTTTCAGGTTGCTTGTACACCAGTAA
Protein sequence

>MS.gene041118.t1

MSSREHTTLQDKMEKGGSRKMAAHNTLKKGRRERKMALIQDVDKLKRKLRHEENVHRVLERALTRPLGALPRLPPYLPSHTLELVAEVAVLEEEVVRLEEKVVNFRQGLYQEAVYISSKRNAENSIDPMDQNSIKGSKHQRSKSLSQSELNSTTIRPQISLARSASSRKLVNGKQLHSKQDSLSSIPEEKSIEKKMAKVITPVKKSPSKQESVDKCADHVKLQLEKRLVDQERAQNSSDDKVLEVDRTPNRVSEDIVKCLCSIFMRISIFKDNLGESKTPPRDPYGICSISKTRDIGAYNSFCEIEASTVDFNRMKNSVFLINRLKFLFGKLASVNLKGLTHQEKLAFWINTYNSCMMNAYLEHGIPESPEMVVALMQKATIVVGGHLLKAMTIEHFILRLPYHLNYTCLKAAKNDEMKARGIFGLEWSEPLVTFALSCGSWSSPVVRVYTASQVDNELEAAKRDYLQAAVGITKTNKLIIPKILDWFLLDFAKDLESLLDWVCLQLPVELRKEAVECLERRGRQPLSHMVHMMPYDFSFRLLVHQ