Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013007.t1 | XP_013461705.1 | 93.1 | 535 | 26 | 1 | 1 | 535 | 26 | 549 | 2.80E-263 | 917.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013007.t1 | A0A072VC47 | 93.1 | 535 | 26 | 1 | 1 | 535 | 26 | 549 | 2.1e-263 | 917.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene013007 | MS.gene28561 | PPI |
MS.gene013007 | MS.gene047660 | PPI |
MS.gene013007 | MS.gene71399 | PPI |
MS.gene011847 | MS.gene013007 | PPI |
MS.gene041118 | MS.gene013007 | PPI |
MS.gene010386 | MS.gene013007 | PPI |
MS.gene013007 | MS.gene44921 | PPI |
MS.gene013007 | MS.gene87318 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013007.t1 | MTR_3g101340 | 93.084 | 535 | 26 | 1 | 1 | 535 | 26 | 549 | 0.0 | 989 |
MS.gene013007.t1 | MTR_3g101340 | 92.897 | 535 | 26 | 2 | 1 | 535 | 1 | 523 | 0.0 | 982 |
MS.gene013007.t1 | MTR_3g101340 | 91.529 | 543 | 26 | 3 | 1 | 535 | 26 | 556 | 0.0 | 976 |
MS.gene013007.t1 | MTR_1g021040 | 63.553 | 546 | 156 | 10 | 17 | 535 | 2 | 531 | 0.0 | 583 |
MS.gene013007.t1 | MTR_5g017790 | 52.037 | 540 | 217 | 15 | 22 | 545 | 13 | 526 | 1.61e-153 | 450 |
MS.gene013007.t1 | MTR_5g017790 | 52.037 | 540 | 217 | 15 | 22 | 545 | 25 | 538 | 1.96e-153 | 450 |
MS.gene013007.t1 | MTR_8g079840 | 47.700 | 587 | 227 | 18 | 12 | 535 | 12 | 581 | 6.14e-133 | 399 |
MS.gene013007.t1 | MTR_5g017790 | 50.125 | 399 | 170 | 12 | 22 | 404 | 25 | 410 | 5.46e-96 | 298 |
MS.gene013007.t1 | MTR_8g079840 | 45.639 | 493 | 200 | 16 | 12 | 442 | 12 | 498 | 2.91e-94 | 296 |
MS.gene013007.t1 | MTR_5g079910 | 32.932 | 498 | 286 | 13 | 28 | 513 | 10 | 471 | 4.22e-61 | 210 |
MS.gene013007.t1 | MTR_4g058015 | 42.276 | 246 | 122 | 6 | 277 | 514 | 418 | 651 | 7.44e-54 | 194 |
MS.gene013007.t1 | MTR_5g018820 | 27.675 | 542 | 298 | 21 | 37 | 513 | 74 | 586 | 1.24e-33 | 135 |
MS.gene013007.t1 | MTR_8g078760 | 30.000 | 320 | 182 | 6 | 236 | 526 | 296 | 602 | 7.02e-32 | 130 |
MS.gene013007.t1 | MTR_5g012790 | 25.586 | 512 | 304 | 16 | 27 | 508 | 78 | 542 | 1.09e-31 | 129 |
MS.gene013007.t1 | MTR_4g068920 | 25.311 | 482 | 267 | 17 | 84 | 499 | 124 | 578 | 1.20e-26 | 114 |
MS.gene013007.t1 | MTR_8g078760 | 29.508 | 244 | 142 | 4 | 236 | 451 | 296 | 537 | 1.05e-22 | 102 |
MS.gene013007.t1 | MTR_5g079910 | 27.701 | 361 | 233 | 9 | 28 | 379 | 10 | 351 | 4.12e-22 | 98.6 |
MS.gene013007.t1 | MTR_3g073590 | 30.811 | 185 | 103 | 4 | 322 | 499 | 593 | 759 | 8.70e-16 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013007.t1 | AT5G42690 | 51.562 | 512 | 213 | 13 | 18 | 526 | 8 | 487 | 9.73e-140 | 414 |
MS.gene013007.t1 | AT5G42690 | 51.562 | 512 | 213 | 13 | 18 | 526 | 35 | 514 | 1.56e-139 | 414 |
MS.gene013007.t1 | AT5G42690 | 51.562 | 512 | 213 | 13 | 18 | 526 | 35 | 514 | 1.56e-139 | 414 |
MS.gene013007.t1 | AT5G42690 | 51.462 | 513 | 211 | 14 | 18 | 526 | 35 | 513 | 1.82e-138 | 412 |
MS.gene013007.t1 | AT5G42690 | 52.459 | 488 | 197 | 13 | 42 | 526 | 7 | 462 | 6.97e-134 | 398 |
MS.gene013007.t1 | AT4G37080 | 44.923 | 581 | 224 | 16 | 15 | 530 | 27 | 576 | 2.01e-128 | 388 |
MS.gene013007.t1 | AT4G37080 | 44.923 | 581 | 224 | 16 | 15 | 530 | 40 | 589 | 3.22e-128 | 388 |
MS.gene013007.t1 | AT4G37080 | 44.923 | 581 | 224 | 16 | 15 | 530 | 40 | 589 | 3.22e-128 | 388 |
MS.gene013007.t1 | AT4G37080 | 42.683 | 492 | 198 | 14 | 15 | 442 | 40 | 511 | 3.29e-91 | 289 |
MS.gene013007.t1 | AT2G39690 | 39.274 | 303 | 141 | 7 | 236 | 513 | 94 | 378 | 1.63e-58 | 201 |
MS.gene013007.t1 | AT2G39690 | 39.274 | 303 | 141 | 7 | 236 | 513 | 175 | 459 | 9.85e-58 | 201 |
MS.gene013007.t1 | AT2G39690 | 39.274 | 303 | 141 | 7 | 236 | 513 | 201 | 485 | 1.17e-57 | 201 |
MS.gene013007.t1 | AT2G39690 | 38.944 | 303 | 141 | 7 | 236 | 513 | 175 | 458 | 1.57e-57 | 200 |
MS.gene013007.t1 | AT2G39690 | 38.944 | 303 | 141 | 7 | 236 | 513 | 201 | 484 | 1.82e-57 | 200 |
MS.gene013007.t1 | AT3G12540 | 31.755 | 507 | 293 | 15 | 32 | 516 | 57 | 532 | 2.57e-54 | 193 |
MS.gene013007.t1 | AT3G12540 | 31.828 | 487 | 271 | 16 | 60 | 516 | 10 | 465 | 4.76e-53 | 188 |
MS.gene013007.t1 | AT5G60720 | 34.954 | 329 | 144 | 11 | 238 | 514 | 340 | 650 | 6.79e-50 | 183 |
MS.gene013007.t1 | AT1G16750 | 28.544 | 515 | 312 | 17 | 27 | 528 | 31 | 502 | 1.28e-38 | 149 |
MS.gene013007.t1 | AT2G39690 | 37.662 | 231 | 113 | 5 | 236 | 442 | 201 | 424 | 3.89e-37 | 143 |
MS.gene013007.t1 | AT2G39690 | 37.229 | 231 | 113 | 5 | 236 | 442 | 201 | 423 | 5.63e-37 | 142 |
MS.gene013007.t1 | AT3G13000 | 29.070 | 344 | 178 | 10 | 236 | 528 | 224 | 552 | 7.13e-37 | 144 |
MS.gene013007.t1 | AT3G13000 | 29.070 | 344 | 178 | 10 | 236 | 528 | 224 | 552 | 7.13e-37 | 144 |
MS.gene013007.t1 | AT3G13000 | 29.070 | 344 | 178 | 10 | 236 | 528 | 195 | 523 | 7.78e-37 | 144 |
MS.gene013007.t1 | AT5G47380 | 26.465 | 529 | 317 | 18 | 4 | 508 | 64 | 544 | 1.38e-33 | 135 |
MS.gene013007.t1 | AT5G47380 | 26.236 | 526 | 322 | 16 | 4 | 508 | 8 | 488 | 1.44e-33 | 134 |
MS.gene013007.t1 | AT5G47380 | 26.465 | 529 | 317 | 18 | 4 | 508 | 64 | 544 | 1.94e-33 | 135 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 19 | 503 | 8.85e-33 | 132 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 53 | 537 | 1.16e-32 | 132 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 73 | 557 | 1.47e-32 | 132 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 73 | 557 | 1.47e-32 | 132 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 73 | 557 | 1.47e-32 | 132 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 73 | 557 | 1.47e-32 | 132 |
MS.gene013007.t1 | AT5G66600 | 26.938 | 516 | 294 | 18 | 37 | 500 | 73 | 557 | 1.47e-32 | 132 |
MS.gene013007.t1 | AT2G23700 | 30.154 | 325 | 166 | 11 | 237 | 527 | 385 | 682 | 5.41e-31 | 128 |
MS.gene013007.t1 | AT3G18900 | 30.721 | 319 | 171 | 12 | 236 | 538 | 234 | 518 | 6.37e-28 | 117 |
MS.gene013007.t1 | AT3G18900 | 30.721 | 319 | 171 | 12 | 236 | 538 | 229 | 513 | 8.74e-28 | 117 |
MS.gene013007.t1 | AT3G18900 | 30.721 | 319 | 171 | 12 | 236 | 538 | 153 | 437 | 1.04e-27 | 116 |
MS.gene013007.t1 | AT3G18900 | 30.721 | 319 | 171 | 12 | 236 | 538 | 153 | 437 | 1.04e-27 | 116 |
MS.gene013007.t1 | AT2G39690 | 35.135 | 185 | 92 | 4 | 236 | 396 | 175 | 355 | 5.40e-27 | 112 |
MS.gene013007.t1 | AT5G66600 | 26.407 | 462 | 272 | 16 | 37 | 446 | 73 | 518 | 6.00e-25 | 108 |
MS.gene013007.t1 | AT5G66600 | 26.407 | 462 | 272 | 16 | 37 | 446 | 73 | 518 | 6.00e-25 | 108 |
MS.gene013007.t1 | AT5G66600 | 26.407 | 462 | 272 | 16 | 37 | 446 | 73 | 518 | 6.00e-25 | 108 |
MS.gene013007.t1 | AT5G66600 | 26.407 | 462 | 272 | 16 | 37 | 446 | 73 | 518 | 6.00e-25 | 108 |
MS.gene013007.t1 | AT5G47380 | 26.395 | 466 | 283 | 16 | 4 | 446 | 64 | 492 | 8.39e-25 | 108 |
MS.gene013007.t1 | AT5G47380 | 26.522 | 460 | 278 | 16 | 4 | 440 | 64 | 486 | 2.21e-24 | 107 |
MS.gene013007.t1 | AT1G43020 | 30.218 | 321 | 177 | 13 | 237 | 543 | 151 | 438 | 1.49e-23 | 103 |
MS.gene013007.t1 | AT1G76620 | 29.730 | 222 | 136 | 4 | 314 | 528 | 291 | 499 | 1.86e-22 | 101 |
MS.gene013007.t1 | AT1G21060 | 26.994 | 326 | 189 | 12 | 238 | 537 | 187 | 489 | 4.12e-20 | 94.0 |
MS.gene013007.t1 | AT1G21060 | 26.994 | 326 | 189 | 12 | 238 | 537 | 199 | 501 | 5.02e-20 | 94.0 |
MS.gene013007.t1 | AT1G16750 | 27.110 | 391 | 241 | 13 | 26 | 404 | 30 | 388 | 9.71e-19 | 89.0 |
MS.gene013007.t1 | AT3G18900 | 31.193 | 218 | 124 | 7 | 236 | 442 | 234 | 436 | 1.12e-18 | 89.4 |
MS.gene013007.t1 | AT5G66600 | 25.926 | 405 | 237 | 14 | 37 | 393 | 19 | 408 | 1.19e-18 | 89.0 |
MS.gene013007.t1 | AT5G66600 | 25.926 | 405 | 237 | 14 | 37 | 393 | 73 | 462 | 2.21e-18 | 88.6 |
MS.gene013007.t1 | AT5G66600 | 25.926 | 405 | 237 | 14 | 37 | 393 | 73 | 462 | 2.21e-18 | 88.6 |
MS.gene013007.t1 | AT5G66600 | 25.926 | 405 | 237 | 14 | 37 | 393 | 73 | 462 | 2.21e-18 | 88.6 |
MS.gene013007.t1 | AT3G18900 | 34.756 | 164 | 87 | 5 | 236 | 393 | 234 | 383 | 1.80e-16 | 82.0 |
MS.gene013007.t1 | AT1G43020 | 33.175 | 211 | 112 | 10 | 237 | 440 | 151 | 339 | 1.38e-15 | 79.0 |
MS.gene013007.t1 | AT1G76620 | 30.370 | 135 | 86 | 2 | 314 | 442 | 291 | 423 | 9.83e-12 | 67.4 |
Find 84 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTATGGTATCTTGGAATT+TGG | 0.102319 | 3.2:-84364172 | MS.gene013007:CDS |
CAAATGCTCCAGTTTCATTT+TGG | 0.176964 | 3.2:+84365368 | None:intergenic |
TCCCTTGTTCACTTGGTAAT+TGG | 0.180237 | 3.2:+84362481 | None:intergenic |
ACAACCATTTCAGGACTTTC+TGG | 0.198778 | 3.2:+84363546 | None:intergenic |
CAAACAGATCACATTATTAA+AGG | 0.209397 | 3.2:-84363247 | MS.gene013007:intron |
ACCAAGAGAAGCTTGCATTT+TGG | 0.224784 | 3.2:-84363891 | MS.gene013007:CDS |
TCCAAATGATAGTACAAAAT+TGG | 0.226640 | 3.2:-84365319 | MS.gene013007:CDS |
TGCTTTGTTTCAGGCTTTCA+TGG | 0.247144 | 3.2:-84363580 | MS.gene013007:intron |
TTTCAGGCTTTCATGGAAAA+TGG | 0.251642 | 3.2:-84363573 | MS.gene013007:intron |
CTTACATATTTCCAGTGATA+TGG | 0.276394 | 3.2:+84363350 | None:intergenic |
AGCCTGTAAGTATTCTCTTT+TGG | 0.289352 | 3.2:+84362608 | None:intergenic |
CTTGCACATAATTGCTTGTA+TGG | 0.312423 | 3.2:+84364133 | None:intergenic |
GGCATAAGAAATGCTGTTAA+AGG | 0.322385 | 3.2:-84365978 | MS.gene013007:CDS |
AAATACCAATCTAACATCTT+TGG | 0.326581 | 3.2:+84362552 | None:intergenic |
TGCCATTTGGCCTTTACATA+TGG | 0.329071 | 3.2:+84364939 | None:intergenic |
ATCAAGCAAAGACAGAAAAT+TGG | 0.331031 | 3.2:-84365946 | MS.gene013007:CDS |
CCTTAAAATGCAGTGTTCTA+TGG | 0.336704 | 3.2:+84363376 | None:intergenic |
CAAAATGAAACTGGAGCATT+TGG | 0.336998 | 3.2:-84365367 | MS.gene013007:CDS |
AAGAGCTTTGAATAGGCCTT+TGG | 0.355706 | 3.2:-84365762 | MS.gene013007:CDS |
ATCAATGCAACAACCATTTC+AGG | 0.355842 | 3.2:+84363537 | None:intergenic |
GAATTTGGAAAGAGAGATAT+TGG | 0.357324 | 3.2:-84364157 | MS.gene013007:CDS |
CAAGCTTCTCTTGGTGGTTG+AGG | 0.358782 | 3.2:+84363899 | None:intergenic |
ATGACAATAAGAAGCACTTA+TGG | 0.360141 | 3.2:-84363207 | MS.gene013007:CDS |
TGCTGATTCATGATGAGATT+TGG | 0.376454 | 3.2:-84362686 | MS.gene013007:CDS |
GCTTCTTTCCCTTGTTCACT+TGG | 0.383608 | 3.2:+84362474 | None:intergenic |
GTCATCCTCCAAAATGAAAC+TGG | 0.383847 | 3.2:-84365376 | MS.gene013007:CDS |
TGATTTCTTACTTCAGCAAT+TGG | 0.385791 | 3.2:+84364349 | None:intergenic |
TTGCTCTCTCTTGTGGAACT+TGG | 0.395357 | 3.2:-84363155 | MS.gene013007:CDS |
TTTCGATCCTTATGGTATCT+TGG | 0.397308 | 3.2:-84364179 | MS.gene013007:CDS |
CTTGTTCACTTGGTAATTGG+AGG | 0.401273 | 3.2:+84362484 | None:intergenic |
TGTAGTGATTTATTGTCAAC+TGG | 0.403736 | 3.2:+84364895 | None:intergenic |
TCCAAAATGCAAGCTTCTCT+TGG | 0.407594 | 3.2:+84363890 | None:intergenic |
AGCCAAAAGAGAATACTTAC+AGG | 0.418978 | 3.2:-84362610 | MS.gene013007:CDS |
AATTCCTCAAAACTCTCAAA+AGG | 0.420571 | 3.2:-84366000 | MS.gene013007:CDS |
CATTGGAAAGAGCTTTGAAT+AGG | 0.428590 | 3.2:-84365769 | MS.gene013007:CDS |
AGGCCTAAAACAACTCTTCC+TGG | 0.431097 | 3.2:-84365273 | MS.gene013007:intron |
GTCACATTTGCTCTCTCTTG+TGG | 0.432883 | 3.2:-84363162 | MS.gene013007:CDS |
GAATACTTACAGGCTGCAAT+TGG | 0.433643 | 3.2:-84362600 | MS.gene013007:CDS |
CCAAATTCCAAGATACCATA+AGG | 0.433856 | 3.2:+84364172 | None:intergenic |
AGAGCTTTGAATAGGCCTTT+GGG | 0.434744 | 3.2:-84365761 | MS.gene013007:CDS |
TTATTCCAAAGATGTTAGAT+TGG | 0.438738 | 3.2:-84362557 | MS.gene013007:CDS |
GAATGAGTACACCAACCTTC+AGG | 0.448397 | 3.2:-84364240 | MS.gene013007:CDS |
TCTCCTTGTGGAGTTTCTTG+TGG | 0.457196 | 3.2:+84364322 | None:intergenic |
AGTCTTTGTTTCTTCTACAT+CGG | 0.465672 | 3.2:-84364072 | MS.gene013007:CDS |
CTTTGCAGCAGCAGGAACTA+AGG | 0.466302 | 3.2:-84364384 | MS.gene013007:intron |
ATCCATATGTAAAGGCCAAA+TGG | 0.476033 | 3.2:-84364941 | MS.gene013007:CDS |
AATAGTTAGGCTTGAAGAGA+AGG | 0.476326 | 3.2:-84365442 | MS.gene013007:CDS |
AAAATGCAAGCTTCTCTTGG+TGG | 0.481113 | 3.2:+84363893 | None:intergenic |
CTAACATAGGGAGGGAGATA+AGG | 0.484013 | 3.2:+84365719 | None:intergenic |
TGATGAGATTTGGCCAATGC+AGG | 0.485017 | 3.2:-84362676 | MS.gene013007:CDS |
CATACCAGAAAGTCCTGAAA+TGG | 0.495659 | 3.2:-84363550 | MS.gene013007:CDS |
AGAGAGAGCAAATGTGACTA+GGG | 0.497407 | 3.2:+84363167 | None:intergenic |
GTTTATTGAAACTGAAGTCA+TGG | 0.501719 | 3.2:+84366034 | None:intergenic |
TGCTAGAAGAAGAAATAGTT+AGG | 0.501808 | 3.2:-84365455 | MS.gene013007:CDS |
ACTTAGAATCATTGCTAGAC+TGG | 0.504652 | 3.2:-84362512 | MS.gene013007:CDS |
TTTGGACTTTCATCTCCTTG+TGG | 0.509477 | 3.2:+84364310 | None:intergenic |
CTCCAATTACCAAGTGAACA+AGG | 0.511766 | 3.2:-84362483 | MS.gene013007:CDS |
ATTCCTCAAAACTCTCAAAA+GGG | 0.516730 | 3.2:-84365999 | MS.gene013007:CDS |
AGCAAGAAATCCATATGTAA+AGG | 0.522417 | 3.2:-84364949 | MS.gene013007:CDS |
AAGAGAGAGCAAATGTGACT+AGG | 0.525788 | 3.2:+84363166 | None:intergenic |
AAAGACTTAGCAGTTTGTGT+TGG | 0.527005 | 3.2:+84364088 | None:intergenic |
TTCAACTTTCACAGGTGGAT+AGG | 0.535430 | 3.2:-84365832 | MS.gene013007:intron |
GCATTTGGAAGCTGCTTCTG+TGG | 0.539751 | 3.2:-84365352 | MS.gene013007:CDS |
ATTCAGGCAACAATAAATGT+AGG | 0.542703 | 3.2:-84363422 | MS.gene013007:intron |
ATAGGTTGAAGAAGAAGCTT+AGG | 0.543202 | 3.2:-84365814 | MS.gene013007:CDS |
AATAAGAAGCACTTATGGAC+TGG | 0.543742 | 3.2:-84363202 | MS.gene013007:CDS |
GGAGAACATTCACAAGGCAT+TGG | 0.546595 | 3.2:-84365786 | MS.gene013007:CDS |
TATGGTTGTGGCATTTAACA+AGG | 0.552219 | 3.2:+84363394 | None:intergenic |
AATGCAGTGTTCTATGGTTG+TGG | 0.557697 | 3.2:+84363382 | None:intergenic |
GGGAGATAAGGAGGAAGACG+AGG | 0.568888 | 3.2:+84365731 | None:intergenic |
CACAGCATCACATATTGAGA+AGG | 0.574850 | 3.2:-84362643 | MS.gene013007:CDS |
GCTAGGACTTGTGGCTGAAG+TGG | 0.583652 | 3.2:-84365481 | MS.gene013007:CDS |
GAAGAAGAAGCTTAGGCATG+AGG | 0.586915 | 3.2:-84365807 | MS.gene013007:CDS |
ACATAGGGAGGGAGATAAGG+AGG | 0.588280 | 3.2:+84365722 | None:intergenic |
ACTCTAGACGCTAGGACTTG+TGG | 0.590126 | 3.2:-84365490 | MS.gene013007:intron |
TCCAATTACCAAGTGAACAA+GGG | 0.608450 | 3.2:-84362482 | MS.gene013007:CDS |
GTGTAAACTCTAACCTGCAT+TGG | 0.610022 | 3.2:+84362663 | None:intergenic |
ATAAGAAATGCTGTTAAAGG+TGG | 0.612023 | 3.2:-84365975 | MS.gene013007:CDS |
CAGGCAACAATAAATGTAGG+TGG | 0.618980 | 3.2:-84363419 | MS.gene013007:CDS |
AGACGAGGCAAAGCTCCCAA+AGG | 0.660975 | 3.2:+84365746 | None:intergenic |
GGTTGTTGCATTGATGCAGA+AGG | 0.661395 | 3.2:-84363529 | MS.gene013007:intron |
GAGAGAGCAAATGTGACTAG+GGG | 0.692122 | 3.2:+84363168 | None:intergenic |
GCATGAGGAGAACATTCACA+AGG | 0.707385 | 3.2:-84365792 | MS.gene013007:CDS |
CATCCACAAGAAACTCCACA+AGG | 0.713854 | 3.2:-84364325 | MS.gene013007:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CAATTTTCAATATTTTATAA+AGG | - | chr3.2:84365241-84365260 | MS.gene013007:intron | 10.0% |
!! | AAAATACATCATAATTATGT+TGG | - | chr3.2:84363659-84363678 | MS.gene013007:intron | 15.0% |
!! | ATAAAGAGAAAAAATAGAAA+GGG | + | chr3.2:84362655-84362674 | None:intergenic | 15.0% |
!! | CTAAACAATTACTAATATAA+GGG | + | chr3.2:84364352-84364371 | None:intergenic | 15.0% |
!! | TAAATAAACTAACAAGTTAT+TGG | - | chr3.2:84365519-84365538 | MS.gene013007:intron | 15.0% |
!! | TACATAATTGATTATTTCAT+TGG | + | chr3.2:84363101-84363120 | None:intergenic | 15.0% |
!!! | ATATGTTTTAAATGACTTTA+GGG | - | chr3.2:84366001-84366020 | MS.gene013007:CDS | 15.0% |
!!! | ATATTTTCAGAGATTATATT+TGG | + | chr3.2:84364047-84364066 | None:intergenic | 15.0% |
!!! | TATATGTTTTAAATGACTTT+AGG | - | chr3.2:84366000-84366019 | MS.gene013007:CDS | 15.0% |
!!! | TTTACATTGATAATTATTTG+AGG | - | chr3.2:84362718-84362737 | MS.gene013007:intron | 15.0% |
!! | AAATATTTCTCAAAACATAG+TGG | - | chr3.2:84363727-84363746 | MS.gene013007:intron | 20.0% |
!! | CAAGACTATAATAATATTGA+AGG | + | chr3.2:84362788-84362807 | None:intergenic | 20.0% |
!! | CCTAAACAATTACTAATATA+AGG | + | chr3.2:84364353-84364372 | None:intergenic | 20.0% |
!! | CCTTATATTAGTAATTGTTT+AGG | - | chr3.2:84364350-84364369 | MS.gene013007:CDS | 20.0% |
!! | GATAAAGAGAAAAAATAGAA+AGG | + | chr3.2:84362656-84362675 | None:intergenic | 20.0% |
!! | GTTTATTTACAAAACAATAG+TGG | + | chr3.2:84365508-84365527 | None:intergenic | 20.0% |
!! | TACCTAAAACTAAACTTATA+AGG | + | chr3.2:84365946-84365965 | None:intergenic | 20.0% |
!! | TGAAATAGCTTAATCATAAT+CGG | + | chr3.2:84363129-84363148 | None:intergenic | 20.0% |
!! | TTAAATGTAATCATATGTGT+CGG | - | chr3.2:84362744-84362763 | MS.gene013007:intron | 20.0% |
!! | TTTATCTTGAATATCAGTAA+TGG | - | chr3.2:84364584-84364603 | MS.gene013007:intron | 20.0% |
!!! | AAACAGTTTTTAGATTTTAG+AGG | + | chr3.2:84364122-84364141 | None:intergenic | 20.0% |
!!! | AAATCTAAAAACTGTTTTGA+AGG | - | chr3.2:84364125-84364144 | MS.gene013007:CDS | 20.0% |
!!! | TACAACATACTTTTAAATTG+TGG | - | chr3.2:84363542-84363561 | MS.gene013007:CDS | 20.0% |
!!! | TGACCTACTTTAAAAATATT+AGG | - | chr3.2:84365402-84365421 | MS.gene013007:CDS | 20.0% |
!!! | TTTTTGCTCATTAATTAATG+CGG | - | chr3.2:84364881-84364900 | MS.gene013007:CDS | 20.0% |
! | AAATACCAATCTAACATCTT+TGG | + | chr3.2:84365787-84365806 | None:intergenic | 25.0% |
! | ACATAATGTACTATAGATCA+CGG | + | chr3.2:84363268-84363287 | None:intergenic | 25.0% |
! | ACATTATGTGACAAGAATAT+TGG | - | chr3.2:84363279-84363298 | MS.gene013007:intron | 25.0% |
! | AGAAAAAGCTACATTTGAAA+AGG | + | chr3.2:84365024-84365043 | None:intergenic | 25.0% |
! | CAAACAGATCACATTATTAA+AGG | - | chr3.2:84365089-84365108 | MS.gene013007:intron | 25.0% |
! | CTTTAATAATGTGATCTGTT+TGG | + | chr3.2:84365091-84365110 | None:intergenic | 25.0% |
! | TAGTTGAGTATGTACATATT+TGG | - | chr3.2:84363149-84363168 | MS.gene013007:CDS | 25.0% |
! | TCCAAATGATAGTACAAAAT+TGG | - | chr3.2:84363017-84363036 | MS.gene013007:intron | 25.0% |
! | TTATTCCAAAGATGTTAGAT+TGG | - | chr3.2:84365779-84365798 | MS.gene013007:CDS | 25.0% |
! | TTGAAAATATCCACATGTAT+CGG | - | chr3.2:84364654-84364673 | MS.gene013007:intron | 25.0% |
! | TTGAAGTGTGCATTAAAAAT+TGG | + | chr3.2:84365604-84365623 | None:intergenic | 25.0% |
!! | AGAGTGATTTTACTAACATA+GGG | + | chr3.2:84362632-84362651 | None:intergenic | 25.0% |
!! | ATTTTTACAAATTGTGAGTG+AGG | + | chr3.2:84365919-84365938 | None:intergenic | 25.0% |
!! | TAATTGGAATTTTTGCCATT+TGG | + | chr3.2:84363413-84363432 | None:intergenic | 25.0% |
!! | TCAACTGGAATTTTCTTAAT+TGG | + | chr3.2:84363429-84363448 | None:intergenic | 25.0% |
!! | TCCAATTTTGTACTATCATT+TGG | + | chr3.2:84363021-84363040 | None:intergenic | 25.0% |
!!! | ACACTAGATATTTTTCTAGT+AGG | + | chr3.2:84364515-84364534 | None:intergenic | 25.0% |
!!! | TAAAAACTGTTTTGAAGGAA+CGG | - | chr3.2:84364130-84364149 | MS.gene013007:CDS | 25.0% |
!!! | TCTAATTTTCTGAAATTTGC+AGG | - | chr3.2:84364376-84364395 | MS.gene013007:CDS | 25.0% |
!!! | TCTTTTCTTTGTTTATCATC+TGG | + | chr3.2:84363336-84363355 | None:intergenic | 25.0% |
!!! | TGAATTTTTTCAACTTTCAC+AGG | - | chr3.2:84362496-84362515 | MS.gene013007:CDS | 25.0% |
!!! | TGAGAAATATTTTTTGTGAG+TGG | + | chr3.2:84363719-84363738 | None:intergenic | 25.0% |
!!! | TGCCTTATAAGTTTAGTTTT+AGG | - | chr3.2:84365941-84365960 | MS.gene013007:CDS | 25.0% |
AATTACTATCAATGTCGACA+TGG | + | chr3.2:84364618-84364637 | None:intergenic | 30.0% | |
AATTCCTCAAAACTCTCAAA+AGG | - | chr3.2:84362336-84362355 | MS.gene013007:intron | 30.0% | |
AGCAAGAAATCCATATGTAA+AGG | - | chr3.2:84363387-84363406 | MS.gene013007:CDS | 30.0% | |
ATAAGAAATGCTGTTAAAGG+TGG | - | chr3.2:84362361-84362380 | MS.gene013007:intron | 30.0% | |
ATCAAGCAAAGACAGAAAAT+TGG | - | chr3.2:84362390-84362409 | MS.gene013007:intron | 30.0% | |
ATGTTGTCATATGCTAAACT+TGG | + | chr3.2:84364856-84364875 | None:intergenic | 30.0% | |
ATTCAGGCAACAATAAATGT+AGG | - | chr3.2:84364914-84364933 | MS.gene013007:CDS | 30.0% | |
ATTCCTCAAAACTCTCAAAA+GGG | - | chr3.2:84362337-84362356 | MS.gene013007:intron | 30.0% | |
CTTACATATTTCCAGTGATA+TGG | + | chr3.2:84364989-84365008 | None:intergenic | 30.0% | |
GAATTTGGAAAGAGAGATAT+TGG | - | chr3.2:84364179-84364198 | MS.gene013007:CDS | 30.0% | |
GATCATTCATGTTCTCTAAA+TGG | + | chr3.2:84365582-84365601 | None:intergenic | 30.0% | |
GCAATTAATCAGTCTTTCAA+TGG | + | chr3.2:84365453-84365472 | None:intergenic | 30.0% | |
TATCATCTGGTAAGACAAAA+AGG | + | chr3.2:84363323-84363342 | None:intergenic | 30.0% | |
TATTTCTCAAAACATAGTGG+AGG | - | chr3.2:84363730-84363749 | MS.gene013007:intron | 30.0% | |
TGATTTCTTACTTCAGCAAT+TGG | + | chr3.2:84363990-84364009 | None:intergenic | 30.0% | |
TGCTAGAAGAAGAAATAGTT+AGG | - | chr3.2:84362881-84362900 | MS.gene013007:intron | 30.0% | |
TGTAGTGATTTATTGTCAAC+TGG | + | chr3.2:84363444-84363463 | None:intergenic | 30.0% | |
TGTTGTCATATGCTAAACTT+GGG | + | chr3.2:84364855-84364874 | None:intergenic | 30.0% | |
TTAAAAAAACTCTAGACGCT+AGG | - | chr3.2:84362838-84362857 | MS.gene013007:intron | 30.0% | |
! | AAGAGAAGGTCTTACATTTT+AGG | - | chr3.2:84362908-84362927 | MS.gene013007:intron | 30.0% |
! | ACTTTAAAAATATTAGGCCC+TGG | - | chr3.2:84365408-84365427 | MS.gene013007:CDS | 30.0% |
! | AGTCTTTGTTTCTTCTACAT+CGG | - | chr3.2:84364264-84364283 | MS.gene013007:CDS | 30.0% |
! | ATACTGCAACATTTTCAACT+AGG | - | chr3.2:84363043-84363062 | MS.gene013007:intron | 30.0% |
! | ATCCAGGAATTTTGAATAGT+GGG | - | chr3.2:84363593-84363612 | MS.gene013007:intron | 30.0% |
! | CTTTAAAAATATTAGGCCCT+GGG | - | chr3.2:84365409-84365428 | MS.gene013007:CDS | 30.0% |
! | GAGAGTGATTTTACTAACAT+AGG | + | chr3.2:84362633-84362652 | None:intergenic | 30.0% |
! | GGTAAAATGGTTTTCAAATG+CGG | + | chr3.2:84363880-84363899 | None:intergenic | 30.0% |
! | TGATTTTACTAACATAGGGA+GGG | + | chr3.2:84362628-84362647 | None:intergenic | 30.0% |
!! | ATGACAATAAGAAGCACTTA+TGG | - | chr3.2:84365129-84365148 | MS.gene013007:intron | 30.0% |
!! | TAAAAGTTCTGCTTTGTTTC+AGG | - | chr3.2:84364747-84364766 | MS.gene013007:intron | 30.0% |
!! | TCAAATGTAGCTTTTTCTGT+TGG | - | chr3.2:84365026-84365045 | MS.gene013007:intron | 30.0% |
!!! | ACATGACAAACCTGTTTTTT+AGG | + | chr3.2:84363483-84363502 | None:intergenic | 30.0% |
!!! | ATTTTTTCAACTTTCACAGG+TGG | - | chr3.2:84362499-84362518 | MS.gene013007:CDS | 30.0% |
!!! | GGGCCTAATATTTTTAAAGT+AGG | + | chr3.2:84365408-84365427 | None:intergenic | 30.0% |
AAAAGGAGATACATGAAGTC+AGG | + | chr3.2:84363306-84363325 | None:intergenic | 35.0% | |
AAAGACTTAGCAGTTTGTGT+TGG | + | chr3.2:84364251-84364270 | None:intergenic | 35.0% | |
AAAGGAGATACATGAAGTCA+GGG | + | chr3.2:84363305-84363324 | None:intergenic | 35.0% | |
AATAGTTAGGCTTGAAGAGA+AGG | - | chr3.2:84362894-84362913 | MS.gene013007:intron | 35.0% | |
ACTTAGAATCATTGCTAGAC+TGG | - | chr3.2:84365824-84365843 | MS.gene013007:intron | 35.0% | |
AGCCAAAAGAGAATACTTAC+AGG | - | chr3.2:84365726-84365745 | MS.gene013007:CDS | 35.0% | |
AGCCATTACTTTCAGATTGA+AGG | + | chr3.2:84364724-84364743 | None:intergenic | 35.0% | |
AGCTACATTTGAAAAGGACA+AGG | + | chr3.2:84365018-84365037 | None:intergenic | 35.0% | |
ATCAATGCAACAACCATTTC+AGG | + | chr3.2:84364802-84364821 | None:intergenic | 35.0% | |
ATCCATATGTAAAGGCCAAA+TGG | - | chr3.2:84363395-84363414 | MS.gene013007:CDS | 35.0% | |
CACTGCAAACCTTTATAATC+TGG | - | chr3.2:84363795-84363814 | MS.gene013007:intron | 35.0% | |
CCAAATTCCAAGATACCATA+AGG | + | chr3.2:84364167-84364186 | None:intergenic | 35.0% | |
CCTTAAAATGCAGTGTTCTA+TGG | + | chr3.2:84364963-84364982 | None:intergenic | 35.0% | |
CCTTATGGTATCTTGGAATT+TGG | - | chr3.2:84364164-84364183 | MS.gene013007:CDS | 35.0% | |
CTTGAATATCAGTAATGGCA+AGG | - | chr3.2:84364589-84364608 | MS.gene013007:intron | 35.0% | |
CTTGCACATAATTGCTTGTA+TGG | + | chr3.2:84364206-84364225 | None:intergenic | 35.0% | |
GATAGGTGTGTAAATAGGTT+AGG | - | chr3.2:84365351-84365370 | MS.gene013007:CDS | 35.0% | |
GGCATAAGAAATGCTGTTAA+AGG | - | chr3.2:84362358-84362377 | MS.gene013007:intron | 35.0% | |
GTGTGTAAATAGGTTAGGTT+AGG | - | chr3.2:84365356-84365375 | MS.gene013007:CDS | 35.0% | |
TAGATGTACCTCAATTACTG+TGG | - | chr3.2:84365284-84365303 | MS.gene013007:CDS | 35.0% | |
TATGGTTGTGGCATTTAACA+AGG | + | chr3.2:84364945-84364964 | None:intergenic | 35.0% | |
TCCAATTACCAAGTGAACAA+GGG | - | chr3.2:84365854-84365873 | MS.gene013007:intron | 35.0% | |
TCTCAGATAGGTGTGTAAAT+AGG | - | chr3.2:84365346-84365365 | MS.gene013007:CDS | 35.0% | |
TGAAACACTGATACAAACAC+CGG | - | chr3.2:84362678-84362697 | MS.gene013007:CDS | 35.0% | |
TGCCTTCAATCTGAAAGTAA+TGG | - | chr3.2:84364719-84364738 | MS.gene013007:intron | 35.0% | |
TGTTTGAGCTACTGGTAAAA+TGG | + | chr3.2:84363893-84363912 | None:intergenic | 35.0% | |
TTAATCAGTCTTTCAATGGC+CGG | + | chr3.2:84365449-84365468 | None:intergenic | 35.0% | |
TTTCAGGCTTTCATGGAAAA+TGG | - | chr3.2:84364763-84364782 | MS.gene013007:intron | 35.0% | |
TTTCGATCCTTATGGTATCT+TGG | - | chr3.2:84364157-84364176 | MS.gene013007:CDS | 35.0% | |
! | AGCCTGTAAGTATTCTCTTT+TGG | + | chr3.2:84365731-84365750 | None:intergenic | 35.0% |
! | ATAGGTTGAAGAAGAAGCTT+AGG | - | chr3.2:84362522-84362541 | MS.gene013007:CDS | 35.0% |
! | CAAAATGAAACTGGAGCATT+TGG | - | chr3.2:84362969-84362988 | MS.gene013007:intron | 35.0% |
! | CAAATGCTCCAGTTTCATTT+TGG | + | chr3.2:84362971-84362990 | None:intergenic | 35.0% |
! | CCATAGAACACTGCATTTTA+AGG | - | chr3.2:84364960-84364979 | MS.gene013007:CDS | 35.0% |
! | GATCCAGGAATTTTGAATAG+TGG | - | chr3.2:84363592-84363611 | MS.gene013007:intron | 35.0% |
! | GTGATTTTACTAACATAGGG+AGG | + | chr3.2:84362629-84362648 | None:intergenic | 35.0% |
! | TCCAGGAATTTTGAATAGTG+GGG | - | chr3.2:84363594-84363613 | MS.gene013007:intron | 35.0% |
!! | AATAAGAAGCACTTATGGAC+TGG | - | chr3.2:84365134-84365153 | MS.gene013007:intron | 35.0% |
!! | AATGTAGCTTTTTCTGTTGG+TGG | - | chr3.2:84365029-84365048 | MS.gene013007:intron | 35.0% |
!! | ATGTAGCTTTTTCTGTTGGT+GGG | - | chr3.2:84365030-84365049 | MS.gene013007:intron | 35.0% |
!! | CATTGGAAAGAGCTTTGAAT+AGG | - | chr3.2:84362567-84362586 | MS.gene013007:CDS | 35.0% |
!! | TGCTGATTCATGATGAGATT+TGG | - | chr3.2:84365650-84365669 | MS.gene013007:intron | 35.0% |
!! | TTTAGATTTTAGAGGCCTGA+AGG | + | chr3.2:84364114-84364133 | None:intergenic | 35.0% |
!!! | ATGCGGTTTTCTTGTTATTC+AGG | - | chr3.2:84364898-84364917 | MS.gene013007:CDS | 35.0% |
!!! | TGACAAACCTGTTTTTTAGG+AGG | + | chr3.2:84363480-84363499 | None:intergenic | 35.0% |
!!! | TGAGAGTTTTGAGGAATTCT+AGG | + | chr3.2:84362334-84362353 | None:intergenic | 35.0% |
!!! | TTTTAAGGCTTCCATATCAC+TGG | - | chr3.2:84364975-84364994 | MS.gene013007:CDS | 35.0% |
AAAATGCAAGCTTCTCTTGG+TGG | + | chr3.2:84364446-84364465 | None:intergenic | 40.0% | |
AAGAGAGAGCAAATGTGACT+AGG | + | chr3.2:84365173-84365192 | None:intergenic | 40.0% | |
AATGCAGTGTTCTATGGTTG+TGG | + | chr3.2:84364957-84364976 | None:intergenic | 40.0% | |
ACAACCATTTCAGGACTTTC+TGG | + | chr3.2:84364793-84364812 | None:intergenic | 40.0% | |
AGAGAGAGCAAATGTGACTA+GGG | + | chr3.2:84365172-84365191 | None:intergenic | 40.0% | |
ATTGATGTAGCGTCTCAGAT+AGG | - | chr3.2:84365334-84365353 | MS.gene013007:CDS | 40.0% | |
CACAGCATCACATATTGAGA+AGG | - | chr3.2:84365693-84365712 | MS.gene013007:intron | 40.0% | |
CAGGCAACAATAAATGTAGG+TGG | - | chr3.2:84364917-84364936 | MS.gene013007:CDS | 40.0% | |
CATACCAGAAAGTCCTGAAA+TGG | - | chr3.2:84364786-84364805 | MS.gene013007:intron | 40.0% | |
CTCCAATTACCAAGTGAACA+AGG | - | chr3.2:84365853-84365872 | MS.gene013007:intron | 40.0% | |
CTGCATCAGCCAGATTATAA+AGG | + | chr3.2:84363807-84363826 | None:intergenic | 40.0% | |
GAATACTTACAGGCTGCAAT+TGG | - | chr3.2:84365736-84365755 | MS.gene013007:CDS | 40.0% | |
GTCATCCTCCAAAATGAAAC+TGG | - | chr3.2:84362960-84362979 | MS.gene013007:intron | 40.0% | |
GTCCAAGTTTCAAAGTGTAG+TGG | + | chr3.2:84363225-84363244 | None:intergenic | 40.0% | |
GTGTAAACTCTAACCTGCAT+TGG | + | chr3.2:84365676-84365695 | None:intergenic | 40.0% | |
TAAAGGTTTGCAGTGTAACC+AGG | + | chr3.2:84363790-84363809 | None:intergenic | 40.0% | |
TCACAACACCACAGTAATTG+AGG | + | chr3.2:84365295-84365314 | None:intergenic | 40.0% | |
TCCAAAATGCAAGCTTCTCT+TGG | + | chr3.2:84364449-84364468 | None:intergenic | 40.0% | |
TTAAATTGTGGTCGTGACTG+CGG | - | chr3.2:84363554-84363573 | MS.gene013007:CDS | 40.0% | |
TTCAACTTTCACAGGTGGAT+AGG | - | chr3.2:84362504-84362523 | MS.gene013007:CDS | 40.0% | |
TTCTTCAGTGTTTGAGCTAC+TGG | + | chr3.2:84363901-84363920 | None:intergenic | 40.0% | |
TTTGGACTTTCATCTCCTTG+TGG | + | chr3.2:84364029-84364048 | None:intergenic | 40.0% | |
! | ACCAAGAGAAGCTTGCATTT+TGG | - | chr3.2:84364445-84364464 | MS.gene013007:intron | 40.0% |
! | ATGCTCCAGTTTCATTTTGG+AGG | + | chr3.2:84362968-84362987 | None:intergenic | 40.0% |
! | CCAGGAATTTTGAATAGTGG+GGG | - | chr3.2:84363595-84363614 | MS.gene013007:intron | 40.0% |
! | CTTGTTCACTTGGTAATTGG+AGG | + | chr3.2:84365855-84365874 | None:intergenic | 40.0% |
! | GAAGGTCTTACATTTTAGGC+AGG | - | chr3.2:84362912-84362931 | MS.gene013007:intron | 40.0% |
! | TCCCTTGTTCACTTGGTAAT+TGG | + | chr3.2:84365858-84365877 | None:intergenic | 40.0% |
! | TGCCATTTGGCCTTTACATA+TGG | + | chr3.2:84363400-84363419 | None:intergenic | 40.0% |
! | TTGCAATTGCGGCAGTTTTA+AGG | + | chr3.2:84363850-84363869 | None:intergenic | 40.0% |
! | TTTCAGATTGAAGGCATACC+CGG | + | chr3.2:84364715-84364734 | None:intergenic | 40.0% |
!! | AAGAGCTTTGAATAGGCCTT+TGG | - | chr3.2:84362574-84362593 | MS.gene013007:CDS | 40.0% |
!! | ACGGAGTTTTTCGATCCTTA+TGG | - | chr3.2:84364149-84364168 | MS.gene013007:CDS | 40.0% |
!! | AGAGCTTTGAATAGGCCTTT+GGG | - | chr3.2:84362575-84362594 | MS.gene013007:CDS | 40.0% |
!! | ATGCCCTTTTGAGAGTTTTG+AGG | + | chr3.2:84362343-84362362 | None:intergenic | 40.0% |
!! | GACCACTACACTTTGAAACT+TGG | - | chr3.2:84363220-84363239 | MS.gene013007:CDS | 40.0% |
!! | TCACCAGGAAGAGTTGTTTT+AGG | + | chr3.2:84363069-84363088 | None:intergenic | 40.0% |
!! | TGCTTTGTTTCAGGCTTTCA+TGG | - | chr3.2:84364756-84364775 | MS.gene013007:intron | 40.0% |
AACCAGGCATGGATCTATGT+AGG | + | chr3.2:84363774-84363793 | None:intergenic | 45.0% | |
AACGTGTCAATGTCGTGTTC+CGG | + | chr3.2:84362700-84362719 | None:intergenic | 45.0% | |
AGGCCTAAAACAACTCTTCC+TGG | - | chr3.2:84363063-84363082 | MS.gene013007:intron | 45.0% | |
CATCCACAAGAAACTCCACA+AGG | - | chr3.2:84364011-84364030 | MS.gene013007:intron | 45.0% | |
CCCCCACTATTCAAAATTCC+TGG | + | chr3.2:84363598-84363617 | None:intergenic | 45.0% | |
CTAACATAGGGAGGGAGATA+AGG | + | chr3.2:84362620-84362639 | None:intergenic | 45.0% | |
CTGTGAGCCTCCTAAAAAAC+AGG | - | chr3.2:84363470-84363489 | MS.gene013007:intron | 45.0% | |
GAAGAAGAAGCTTAGGCATG+AGG | - | chr3.2:84362529-84362548 | MS.gene013007:CDS | 45.0% | |
GAATGAGTACACCAACCTTC+AGG | - | chr3.2:84364096-84364115 | MS.gene013007:CDS | 45.0% | |
GAGAGAGCAAATGTGACTAG+GGG | + | chr3.2:84365171-84365190 | None:intergenic | 45.0% | |
GCAAGTGATCAACTTACAGC+AGG | + | chr3.2:84365213-84365232 | None:intergenic | 45.0% | |
GCATGAGGAGAACATTCACA+AGG | - | chr3.2:84362544-84362563 | MS.gene013007:CDS | 45.0% | |
GCTTCTTTCCCTTGTTCACT+TGG | + | chr3.2:84365865-84365884 | None:intergenic | 45.0% | |
GGAGAACATTCACAAGGCAT+TGG | - | chr3.2:84362550-84362569 | MS.gene013007:CDS | 45.0% | |
GTCACATTTGCTCTCTCTTG+TGG | - | chr3.2:84365174-84365193 | MS.gene013007:intron | 45.0% | |
TCTCCTTGTGGAGTTTCTTG+TGG | + | chr3.2:84364017-84364036 | None:intergenic | 45.0% | |
TGATGAGATTTGGCCAATGC+AGG | - | chr3.2:84365660-84365679 | MS.gene013007:intron | 45.0% | |
TTGCTCTCTCTTGTGGAACT+TGG | - | chr3.2:84365181-84365200 | MS.gene013007:intron | 45.0% | |
! | CATTGGACTAGATACTCACC+AGG | + | chr3.2:84363084-84363103 | None:intergenic | 45.0% |
! | GGTTGTTGCATTGATGCAGA+AGG | - | chr3.2:84364807-84364826 | MS.gene013007:intron | 45.0% |
! | TCCACATGTATCGGTCATGT+CGG | - | chr3.2:84364663-84364682 | MS.gene013007:intron | 45.0% |
! | TTGCATTGATGCAGAAGGTG+TGG | - | chr3.2:84364812-84364831 | MS.gene013007:intron | 45.0% |
! | TTTTCCTACTTTGCAGCAGC+AGG | - | chr3.2:84363944-84363963 | MS.gene013007:intron | 45.0% |
!! | GATTTTAGAGGCCTGAAGGT+TGG | + | chr3.2:84364110-84364129 | None:intergenic | 45.0% |
!! | AAATAATTTATATTAATAGA+TGG | - | chr3.2:84363684-84363703 | MS.gene013007:intron | 5.0% |
!!! | AATTTTCAATATTTTATAAA+GGG | - | chr3.2:84365242-84365261 | MS.gene013007:intron | 5.0% |
!!! | TTATACTTTTAAATATAAAA+TGG | + | chr3.2:84363640-84363659 | None:intergenic | 5.0% |
ACATAGGGAGGGAGATAAGG+AGG | + | chr3.2:84362617-84362636 | None:intergenic | 50.0% | |
ACCGACATGACCGATACATG+TGG | + | chr3.2:84364667-84364686 | None:intergenic | 50.0% | |
ACTCTAGACGCTAGGACTTG+TGG | - | chr3.2:84362846-84362865 | MS.gene013007:intron | 50.0% | |
AGTTCCTGCTGCTGCAAAGT+AGG | + | chr3.2:84363951-84363970 | None:intergenic | 50.0% | |
CTTTGCAGCAGCAGGAACTA+AGG | - | chr3.2:84363952-84363971 | MS.gene013007:intron | 50.0% | |
GATCTATGTAGGCCACTGTG+TGG | + | chr3.2:84363763-84363782 | None:intergenic | 50.0% | |
GCATTTGGAAGCTGCTTCTG+TGG | - | chr3.2:84362984-84363003 | MS.gene013007:intron | 50.0% | |
GCGGTCTGCAATTGCAATTG+CGG | + | chr3.2:84363861-84363880 | None:intergenic | 50.0% | |
GGACCTTAAAAACGTGCCCA+GGG | + | chr3.2:84365428-84365447 | None:intergenic | 50.0% | |
GTTTGCAGTGTAACCAGGCA+TGG | + | chr3.2:84363785-84363804 | None:intergenic | 50.0% | |
! | CAAGCTTCTCTTGGTGGTTG+AGG | + | chr3.2:84364440-84364459 | None:intergenic | 50.0% |
! | GTATCGGTCATGTCGGTGTT+CGG | - | chr3.2:84364670-84364689 | MS.gene013007:intron | 50.0% |
!! | TGTTCGGCATTGACACATGC+CGG | - | chr3.2:84364686-84364705 | MS.gene013007:intron | 50.0% |
!!! | CTGGGCACGTTTTTAAGGTC+CGG | - | chr3.2:84365427-84365446 | MS.gene013007:CDS | 50.0% |
ACTGCGGTTACACTCAGGGA+CGG | - | chr3.2:84363570-84363589 | MS.gene013007:CDS | 55.0% | |
AGACGAGGCAAAGCTCCCAA+AGG | + | chr3.2:84362593-84362612 | None:intergenic | 55.0% | |
ATTGACACATGCCGGACACC+GGG | - | chr3.2:84364694-84364713 | MS.gene013007:intron | 55.0% | |
CATTGACACATGCCGGACAC+CGG | - | chr3.2:84364693-84364712 | MS.gene013007:intron | 55.0% | |
CGGACCTTAAAAACGTGCCC+AGG | + | chr3.2:84365429-84365448 | None:intergenic | 55.0% | |
CGTGACTGCGGTTACACTCA+GGG | - | chr3.2:84363566-84363585 | MS.gene013007:CDS | 55.0% | |
GCTAGGACTTGTGGCTGAAG+TGG | - | chr3.2:84362855-84362874 | MS.gene013007:intron | 55.0% | |
GGCCTACATAGATCCATGCC+TGG | - | chr3.2:84363769-84363788 | MS.gene013007:intron | 55.0% | |
GGGAGATAAGGAGGAAGACG+AGG | + | chr3.2:84362608-84362627 | None:intergenic | 55.0% | |
TCGTGACTGCGGTTACACTC+AGG | - | chr3.2:84363565-84363584 | MS.gene013007:CDS | 55.0% | |
TTACACTCAGGGACGGATCC+AGG | - | chr3.2:84363577-84363596 | MS.gene013007:intron | 55.0% | |
! | AGGCCCTGGGCACGTTTTTA+AGG | - | chr3.2:84365422-84365441 | MS.gene013007:CDS | 55.0% |
! | TTGAAGGCATACCCGGTGTC+CGG | + | chr3.2:84364708-84364727 | None:intergenic | 55.0% |
!! | ACTGTGGTGTTGTGATCGCG+AGG | - | chr3.2:84365300-84365319 | MS.gene013007:CDS | 55.0% |
! | GGAGGCACACATCCACACAG+TGG | - | chr3.2:84363748-84363767 | MS.gene013007:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 84362304 | 84366054 | 84362304 | ID=MS.gene013007 |
chr3.2 | mRNA | 84362304 | 84366054 | 84362304 | ID=MS.gene013007.t1;Parent=MS.gene013007 |
chr3.2 | exon | 84365932 | 84366054 | 84365932 | ID=MS.gene013007.t1.exon1;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84365932 | 84366054 | 84365932 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84365724 | 84365840 | 84365724 | ID=MS.gene013007.t1.exon2;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84365724 | 84365840 | 84365724 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84365274 | 84365505 | 84365274 | ID=MS.gene013007.t1.exon3;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84365274 | 84365505 | 84365274 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84364867 | 84365021 | 84364867 | ID=MS.gene013007.t1.exon4;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84364867 | 84365021 | 84364867 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84364067 | 84364398 | 84364067 | ID=MS.gene013007.t1.exon5;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84364067 | 84364398 | 84364067 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84363861 | 84363960 | 84363861 | ID=MS.gene013007.t1.exon6;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84363861 | 84363960 | 84363861 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84363530 | 84363589 | 84363530 | ID=MS.gene013007.t1.exon7;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84363530 | 84363589 | 84363530 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84363355 | 84363438 | 84363355 | ID=MS.gene013007.t1.exon8;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84363355 | 84363438 | 84363355 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84363143 | 84363262 | 84363143 | ID=MS.gene013007.t1.exon9;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84363143 | 84363262 | 84363143 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84362428 | 84362709 | 84362428 | ID=MS.gene013007.t1.exon10;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84362428 | 84362709 | 84362428 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
chr3.2 | exon | 84362304 | 84362336 | 84362304 | ID=MS.gene013007.t1.exon11;Parent=MS.gene013007.t1 |
chr3.2 | CDS | 84362304 | 84362336 | 84362304 | ID=cds.MS.gene013007.t1;Parent=MS.gene013007.t1 |
Gene Sequence |
Protein sequence |