Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67086.t1 | XP_003589246.1 | 96.3 | 547 | 20 | 0 | 1 | 547 | 1 | 547 | 1.70E-276 | 961.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67086.t1 | G7I4I0 | 96.3 | 547 | 20 | 0 | 1 | 547 | 1 | 547 | 1.2e-276 | 961.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene67086 | MS.gene87318 | PPI |
MS.gene041118 | MS.gene67086 | PPI |
MS.gene28561 | MS.gene67086 | PPI |
MS.gene010386 | MS.gene67086 | PPI |
MS.gene047660 | MS.gene67086 | PPI |
MS.gene44921 | MS.gene67086 | PPI |
MS.gene71399 | MS.gene67086 | PPI |
MS.gene011847 | MS.gene67086 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67086.t1 | MTR_1g021040 | 97.075 | 547 | 16 | 0 | 1 | 547 | 1 | 547 | 0.0 | 1106 |
MS.gene67086.t1 | MTR_3g101340 | 64.791 | 551 | 161 | 9 | 2 | 547 | 17 | 539 | 0.0 | 653 |
MS.gene67086.t1 | MTR_3g101340 | 64.855 | 552 | 160 | 10 | 2 | 547 | 42 | 565 | 0.0 | 652 |
MS.gene67086.t1 | MTR_3g101340 | 63.864 | 559 | 161 | 9 | 2 | 547 | 42 | 572 | 0.0 | 650 |
MS.gene67086.t1 | MTR_5g017790 | 52.311 | 541 | 216 | 10 | 18 | 545 | 21 | 532 | 5.46e-167 | 484 |
MS.gene67086.t1 | MTR_5g017790 | 52.311 | 541 | 216 | 10 | 18 | 545 | 33 | 544 | 8.49e-167 | 484 |
MS.gene67086.t1 | MTR_8g079840 | 51.399 | 572 | 241 | 8 | 10 | 545 | 25 | 595 | 3.03e-163 | 477 |
MS.gene67086.t1 | MTR_8g079840 | 47.579 | 475 | 213 | 7 | 10 | 449 | 25 | 498 | 1.90e-109 | 336 |
MS.gene67086.t1 | MTR_5g017790 | 47.277 | 404 | 172 | 9 | 18 | 409 | 33 | 407 | 1.11e-92 | 290 |
MS.gene67086.t1 | MTR_4g058015 | 32.161 | 597 | 324 | 18 | 13 | 546 | 112 | 690 | 1.45e-76 | 255 |
MS.gene67086.t1 | MTR_5g079910 | 32.616 | 558 | 293 | 12 | 13 | 545 | 10 | 509 | 2.09e-75 | 248 |
MS.gene67086.t1 | MTR_8g078760 | 31.915 | 329 | 198 | 7 | 236 | 545 | 299 | 620 | 6.94e-40 | 154 |
MS.gene67086.t1 | MTR_5g018820 | 32.647 | 340 | 188 | 9 | 235 | 545 | 291 | 618 | 2.21e-39 | 152 |
MS.gene67086.t1 | MTR_5g012790 | 27.640 | 322 | 213 | 7 | 234 | 545 | 272 | 583 | 9.04e-38 | 147 |
MS.gene67086.t1 | MTR_4g068920 | 24.319 | 514 | 343 | 15 | 69 | 545 | 124 | 628 | 8.38e-34 | 136 |
MS.gene67086.t1 | MTR_5g079910 | 27.204 | 397 | 212 | 9 | 13 | 387 | 10 | 351 | 2.78e-26 | 110 |
MS.gene67086.t1 | MTR_8g078760 | 30.508 | 236 | 140 | 6 | 236 | 451 | 299 | 530 | 1.41e-22 | 101 |
MS.gene67086.t1 | MTR_3g073590 | 29.592 | 196 | 123 | 4 | 305 | 495 | 574 | 759 | 7.54e-17 | 84.7 |
MS.gene67086.t1 | MTR_5g061340 | 31.016 | 187 | 118 | 5 | 330 | 510 | 766 | 947 | 1.19e-15 | 80.9 |
MS.gene67086.t1 | MTR_8g033290 | 28.962 | 183 | 114 | 5 | 330 | 504 | 414 | 588 | 9.10e-14 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67086.t1 | AT5G42690 | 51.376 | 545 | 215 | 11 | 10 | 545 | 8 | 511 | 1.42e-159 | 465 |
MS.gene67086.t1 | AT5G42690 | 51.376 | 545 | 215 | 11 | 10 | 545 | 35 | 538 | 5.06e-159 | 464 |
MS.gene67086.t1 | AT5G42690 | 51.376 | 545 | 215 | 11 | 10 | 545 | 35 | 538 | 5.06e-159 | 464 |
MS.gene67086.t1 | AT5G42690 | 51.009 | 545 | 216 | 11 | 10 | 545 | 35 | 537 | 7.16e-159 | 464 |
MS.gene67086.t1 | AT5G42690 | 52.399 | 521 | 205 | 10 | 27 | 545 | 7 | 486 | 1.31e-155 | 454 |
MS.gene67086.t1 | AT4G37080 | 46.689 | 604 | 223 | 14 | 3 | 545 | 30 | 595 | 1.99e-152 | 449 |
MS.gene67086.t1 | AT4G37080 | 46.689 | 604 | 223 | 14 | 3 | 545 | 43 | 608 | 4.86e-152 | 449 |
MS.gene67086.t1 | AT4G37080 | 46.689 | 604 | 223 | 14 | 3 | 545 | 43 | 608 | 4.86e-152 | 449 |
MS.gene67086.t1 | AT4G37080 | 43.590 | 507 | 188 | 13 | 3 | 449 | 43 | 511 | 3.13e-102 | 318 |
MS.gene67086.t1 | AT2G39690 | 38.040 | 347 | 199 | 7 | 212 | 545 | 73 | 416 | 1.84e-67 | 224 |
MS.gene67086.t1 | AT2G39690 | 38.040 | 347 | 199 | 7 | 212 | 545 | 154 | 497 | 1.46e-66 | 224 |
MS.gene67086.t1 | AT2G39690 | 38.040 | 347 | 199 | 7 | 212 | 545 | 180 | 523 | 2.25e-66 | 224 |
MS.gene67086.t1 | AT2G39690 | 37.464 | 347 | 200 | 7 | 212 | 545 | 154 | 496 | 2.75e-66 | 223 |
MS.gene67086.t1 | AT2G39690 | 37.464 | 347 | 200 | 7 | 212 | 545 | 180 | 522 | 5.01e-66 | 223 |
MS.gene67086.t1 | AT3G12540 | 31.550 | 542 | 326 | 11 | 19 | 545 | 59 | 570 | 7.15e-66 | 224 |
MS.gene67086.t1 | AT3G12540 | 31.391 | 532 | 320 | 11 | 29 | 545 | 2 | 503 | 2.26e-64 | 218 |
MS.gene67086.t1 | AT5G60720 | 37.465 | 355 | 175 | 13 | 235 | 546 | 340 | 690 | 1.14e-55 | 199 |
MS.gene67086.t1 | AT5G47380 | 25.458 | 546 | 339 | 16 | 20 | 545 | 33 | 530 | 1.58e-41 | 157 |
MS.gene67086.t1 | AT5G47380 | 25.458 | 546 | 339 | 16 | 20 | 545 | 89 | 586 | 2.16e-41 | 157 |
MS.gene67086.t1 | AT5G47380 | 25.458 | 546 | 339 | 16 | 20 | 545 | 89 | 586 | 2.17e-41 | 158 |
MS.gene67086.t1 | AT5G66600 | 26.011 | 569 | 343 | 19 | 22 | 545 | 19 | 554 | 2.83e-41 | 157 |
MS.gene67086.t1 | AT5G66600 | 25.521 | 576 | 337 | 19 | 22 | 545 | 53 | 588 | 4.02e-41 | 157 |
MS.gene67086.t1 | AT5G66600 | 25.521 | 576 | 337 | 19 | 22 | 545 | 73 | 608 | 4.93e-41 | 157 |
MS.gene67086.t1 | AT5G66600 | 25.521 | 576 | 337 | 19 | 22 | 545 | 73 | 608 | 4.93e-41 | 157 |
MS.gene67086.t1 | AT5G66600 | 25.521 | 576 | 337 | 19 | 22 | 545 | 73 | 608 | 4.93e-41 | 157 |
MS.gene67086.t1 | AT5G66600 | 25.521 | 576 | 337 | 19 | 22 | 545 | 73 | 608 | 4.93e-41 | 157 |
MS.gene67086.t1 | AT5G66600 | 25.521 | 576 | 337 | 19 | 22 | 545 | 73 | 608 | 4.93e-41 | 157 |
MS.gene67086.t1 | AT1G16750 | 32.624 | 282 | 164 | 6 | 281 | 545 | 255 | 527 | 6.99e-39 | 149 |
MS.gene67086.t1 | AT2G39690 | 37.097 | 248 | 143 | 6 | 212 | 449 | 180 | 424 | 9.33e-37 | 142 |
MS.gene67086.t1 | AT2G39690 | 36.290 | 248 | 144 | 6 | 212 | 449 | 180 | 423 | 2.02e-36 | 140 |
MS.gene67086.t1 | AT3G13000 | 25.594 | 547 | 365 | 13 | 20 | 545 | 20 | 545 | 3.92e-36 | 142 |
MS.gene67086.t1 | AT3G13000 | 25.594 | 547 | 365 | 13 | 20 | 545 | 49 | 574 | 6.75e-36 | 142 |
MS.gene67086.t1 | AT3G13000 | 25.594 | 547 | 365 | 13 | 20 | 545 | 49 | 574 | 6.75e-36 | 142 |
MS.gene67086.t1 | AT2G23700 | 30.931 | 333 | 191 | 11 | 235 | 545 | 386 | 701 | 8.04e-36 | 142 |
MS.gene67086.t1 | AT3G18900 | 31.153 | 321 | 185 | 10 | 235 | 545 | 231 | 525 | 7.14e-30 | 123 |
MS.gene67086.t1 | AT3G18900 | 31.153 | 321 | 185 | 10 | 235 | 545 | 236 | 530 | 7.45e-30 | 123 |
MS.gene67086.t1 | AT3G18900 | 31.153 | 321 | 185 | 10 | 235 | 545 | 155 | 449 | 1.05e-29 | 122 |
MS.gene67086.t1 | AT3G18900 | 31.153 | 321 | 185 | 10 | 235 | 545 | 155 | 449 | 1.05e-29 | 122 |
MS.gene67086.t1 | AT1G76620 | 26.531 | 343 | 201 | 9 | 235 | 545 | 193 | 516 | 2.65e-28 | 119 |
MS.gene67086.t1 | AT2G39690 | 34.975 | 203 | 121 | 5 | 212 | 404 | 154 | 355 | 2.10e-27 | 114 |
MS.gene67086.t1 | AT1G43020 | 27.248 | 367 | 220 | 12 | 189 | 545 | 105 | 434 | 5.01e-26 | 111 |
MS.gene67086.t1 | AT5G66600 | 25.208 | 480 | 269 | 17 | 22 | 449 | 73 | 514 | 1.30e-25 | 110 |
MS.gene67086.t1 | AT5G66600 | 25.208 | 480 | 269 | 17 | 22 | 449 | 73 | 514 | 1.30e-25 | 110 |
MS.gene67086.t1 | AT5G66600 | 25.208 | 480 | 269 | 17 | 22 | 449 | 73 | 514 | 1.30e-25 | 110 |
MS.gene67086.t1 | AT5G66600 | 25.208 | 480 | 269 | 17 | 22 | 449 | 73 | 514 | 1.30e-25 | 110 |
MS.gene67086.t1 | AT1G21060 | 29.150 | 247 | 153 | 6 | 307 | 545 | 259 | 491 | 5.38e-24 | 105 |
MS.gene67086.t1 | AT5G47380 | 23.060 | 451 | 281 | 12 | 20 | 452 | 89 | 491 | 5.46e-24 | 105 |
MS.gene67086.t1 | AT1G21060 | 29.150 | 247 | 153 | 6 | 307 | 545 | 271 | 503 | 7.68e-24 | 105 |
MS.gene67086.t1 | AT5G47380 | 23.094 | 446 | 277 | 12 | 20 | 447 | 89 | 486 | 2.57e-23 | 103 |
MS.gene67086.t1 | AT5G66600 | 24.413 | 426 | 240 | 14 | 22 | 401 | 19 | 408 | 7.57e-21 | 95.9 |
MS.gene67086.t1 | AT5G66600 | 25.059 | 427 | 236 | 16 | 22 | 401 | 73 | 462 | 1.32e-20 | 95.5 |
MS.gene67086.t1 | AT5G66600 | 25.059 | 427 | 236 | 16 | 22 | 401 | 73 | 462 | 1.32e-20 | 95.5 |
MS.gene67086.t1 | AT5G66600 | 25.059 | 427 | 236 | 16 | 22 | 401 | 73 | 462 | 1.32e-20 | 95.5 |
MS.gene67086.t1 | AT4G08550 | 29.032 | 217 | 140 | 4 | 330 | 541 | 428 | 635 | 6.97e-19 | 90.9 |
MS.gene67086.t1 | AT4G08550 | 29.032 | 217 | 140 | 4 | 330 | 541 | 482 | 689 | 7.61e-19 | 90.9 |
MS.gene67086.t1 | AT1G16750 | 25.751 | 233 | 130 | 4 | 203 | 403 | 156 | 377 | 5.63e-18 | 86.7 |
MS.gene67086.t1 | AT3G18900 | 30.000 | 220 | 130 | 5 | 235 | 449 | 236 | 436 | 2.10e-16 | 82.4 |
MS.gene67086.t1 | AT3G11920 | 32.386 | 176 | 104 | 6 | 337 | 504 | 426 | 594 | 9.63e-16 | 80.9 |
MS.gene67086.t1 | AT1G43020 | 26.792 | 265 | 158 | 7 | 189 | 447 | 105 | 339 | 1.55e-15 | 78.6 |
MS.gene67086.t1 | AT3G18900 | 31.737 | 167 | 95 | 4 | 235 | 401 | 236 | 383 | 2.81e-13 | 72.0 |
Find 107 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTCCTCAAGCAATTTAA+TGG | 0.160515 | 1.2:+3643517 | None:intergenic |
AAGAGAAAGTTGTGCATTTC+AGG | 0.217633 | 1.2:-3645783 | MS.gene67086:CDS |
GTTTGCTATTCCAAAACTTT+TGG | 0.226853 | 1.2:-3643627 | MS.gene67086:CDS |
ATCAAGAGAAGCTTGCATTT+TGG | 0.234494 | 1.2:-3644603 | MS.gene67086:CDS |
GCGACATATCATCGCCCTTA+TGG | 0.250162 | 1.2:-3644937 | MS.gene67086:CDS |
CAATGCCAACTTTCTTTCTA+TGG | 0.254148 | 1.2:+3646192 | None:intergenic |
GTCATCTTCTAAGACCAAAT+TGG | 0.266940 | 1.2:-3645731 | MS.gene67086:CDS |
GACTTCAATTCATCCAATTT+AGG | 0.267883 | 1.2:+3645655 | None:intergenic |
TATGGCATCTGTCTGGAATT+TGG | 0.270294 | 1.2:-3644866 | MS.gene67086:CDS |
AGAGCTTTCAATAGACCTTT+AGG | 0.273093 | 1.2:-3646025 | MS.gene67086:CDS |
AACAATGAACAGTCCTAAAT+TGG | 0.292060 | 1.2:-3645668 | MS.gene67086:CDS |
AAATACCAATCCAAAAGTTT+TGG | 0.293554 | 1.2:+3643617 | None:intergenic |
TGCTTGTAAGTACTCTCTTT+TGG | 0.308576 | 1.2:+3643673 | None:intergenic |
GTGTTGAAGGAACAGAGTTT+TGG | 0.311139 | 1.2:-3644895 | MS.gene67086:CDS |
TCTGGCTGAAGTGGCAGTTT+TGG | 0.324952 | 1.2:-3645827 | MS.gene67086:CDS |
ATGATAGCAAGAAGCGTATA+TGG | 0.348383 | 1.2:-3643962 | MS.gene67086:CDS |
CGACATATCATCGCCCTTAT+GGG | 0.349226 | 1.2:-3644936 | MS.gene67086:CDS |
ATCATTGCGACAGCCATTTC+AGG | 0.354627 | 1.2:+3644268 | None:intergenic |
AAGGGTAAAAGAACAGAAAA+TGG | 0.354678 | 1.2:-3645095 | MS.gene67086:CDS |
GCTGTTGTGTTTGAATTGTT+TGG | 0.356850 | 1.2:+3645691 | None:intergenic |
TCTTAAAATGAAATGCTCTA+TGG | 0.363710 | 1.2:+3644110 | None:intergenic |
TATGTAGATACTAGCACTTC+TGG | 0.367603 | 1.2:-3645845 | MS.gene67086:intron |
TTGCTCTCTCTTGTGGAACT+TGG | 0.382513 | 1.2:-3643910 | MS.gene67086:CDS |
TGACTGTCCAAATGTGATTT+CGG | 0.386542 | 1.2:-3645029 | MS.gene67086:CDS |
GAATTTGGAAGGAGGGATAT+TGG | 0.390323 | 1.2:-3644851 | MS.gene67086:CDS |
AGGTGATAAATGTTCCAATT+TGG | 0.400770 | 1.2:+3645717 | None:intergenic |
AAAAGACTTAGAATCATTGA+TGG | 0.408960 | 1.2:-3643582 | MS.gene67086:CDS |
ATTCAGGAATTCATAGAGAA+TGG | 0.408998 | 1.2:-3644304 | MS.gene67086:intron |
CAAGCTTCTCTTGATGATTG+AGG | 0.410466 | 1.2:+3644611 | None:intergenic |
CAACTTTCTTTCTATGGTTG+AGG | 0.411792 | 1.2:+3646198 | None:intergenic |
CTTCTACTCATTTGCTTGGA+GGG | 0.413886 | 1.2:+3645285 | None:intergenic |
AATTGCACATAAATGCTTGT+AGG | 0.417107 | 1.2:+3644826 | None:intergenic |
AAAATATGACATACTTCAAC+CGG | 0.421409 | 1.2:+3644750 | None:intergenic |
CCTTCAGTTACCAAGTGAAC+TGG | 0.422267 | 1.2:-3643549 | MS.gene67086:CDS |
AGTCAGCTTCAGTTGACATT+TGG | 0.423973 | 1.2:+3645047 | None:intergenic |
TTGAGGCTTTAGAGCCCATA+AGG | 0.424863 | 1.2:+3644922 | None:intergenic |
GAAGCTAACTTCTGTTAACT+TGG | 0.428663 | 1.2:-3644638 | MS.gene67086:CDS |
GTTACATTTGCTCTCTCTTG+TGG | 0.430859 | 1.2:-3643917 | MS.gene67086:CDS |
TGGACTTCTACTCATTTGCT+TGG | 0.431522 | 1.2:+3645281 | None:intergenic |
AAGCCTCAAAACCGTGTTGA+AGG | 0.432444 | 1.2:-3644908 | MS.gene67086:CDS |
GATATGTCGCCTGGAGAACC+TGG | 0.443172 | 1.2:+3644950 | None:intergenic |
ACTTAGAATCATTGATGGAT+TGG | 0.446559 | 1.2:-3643577 | MS.gene67086:CDS |
TATCTAAAGCTGAAATCATA+TGG | 0.449324 | 1.2:+3643458 | None:intergenic |
GTTGACATTTGGTGTGGACT+AGG | 0.459834 | 1.2:+3645058 | None:intergenic |
ACTTCTACTCATTTGCTTGG+AGG | 0.471763 | 1.2:+3645284 | None:intergenic |
GTGAAGTATCCAGGTTCTCC+AGG | 0.484486 | 1.2:-3644959 | MS.gene67086:CDS |
GAGTACTTACAAGCAACAAT+TGG | 0.486601 | 1.2:-3643665 | MS.gene67086:CDS |
AGCAAGAAGCGTATATGGAT+TGG | 0.487913 | 1.2:-3643957 | MS.gene67086:CDS |
AAGGGCGATGATATGTCGCC+TGG | 0.498586 | 1.2:+3644941 | None:intergenic |
CTAACATAGGGAGGTAGGTA+AGG | 0.499409 | 1.2:+3645983 | None:intergenic |
CATACCGGATAGTCCTGAAA+TGG | 0.499943 | 1.2:-3644281 | MS.gene67086:CDS |
TTGCTCACCTTGGAGTGGTA+TGG | 0.501388 | 1.2:+3645579 | None:intergenic |
GGACCCGTATGGCATCTGTC+TGG | 0.503214 | 1.2:-3644873 | MS.gene67086:CDS |
CAGCAGCAACATCTACTAGT+AGG | 0.504863 | 1.2:-3645606 | MS.gene67086:CDS |
GAAAGTTGTGCATTTCAGGC+AGG | 0.517968 | 1.2:-3645779 | MS.gene67086:CDS |
CTCAACCATAGAAAGAAAGT+TGG | 0.518670 | 1.2:-3646197 | MS.gene67086:CDS |
AAAAGCCGCATCCTCCGAAA+AGG | 0.523097 | 1.2:-3645218 | MS.gene67086:CDS |
ATTTACTAACATAGGGAGGT+AGG | 0.524170 | 1.2:+3645978 | None:intergenic |
ACAGCCATTTCAGGACTATC+CGG | 0.524738 | 1.2:+3644277 | None:intergenic |
ATTGCACATAAATGCTTGTA+GGG | 0.525145 | 1.2:+3644827 | None:intergenic |
GCTTCAGTTGACATTTGGTG+TGG | 0.527731 | 1.2:+3645052 | None:intergenic |
GTGTTTGAATTGTTTGGAAG+AGG | 0.530790 | 1.2:+3645697 | None:intergenic |
ATCTCAAGTGGAGAATGAAC+TGG | 0.533167 | 1.2:-3643702 | MS.gene67086:CDS |
ATGAGTTCAGTGAAGTATCC+AGG | 0.536652 | 1.2:-3644968 | MS.gene67086:CDS |
CCAGTTCACTTGGTAACTGA+AGG | 0.539819 | 1.2:+3643549 | None:intergenic |
AGTGGAGAATGAACTGGAAG+TGG | 0.541549 | 1.2:-3643696 | MS.gene67086:CDS |
CTTCAGTTACCAAGTGAACT+GGG | 0.544127 | 1.2:-3643548 | MS.gene67086:CDS |
TCCAAAACAGACAATTTCCA+AGG | 0.544314 | 1.2:-3644002 | MS.gene67086:intron |
AATTCCAGACAGATGCCATA+CGG | 0.547885 | 1.2:+3644869 | None:intergenic |
ACTAGCACTTCTGGCTGAAG+TGG | 0.547988 | 1.2:-3645836 | MS.gene67086:CDS |
CAAGGAAAAGAGAATCGATC+CGG | 0.552049 | 1.2:-3645336 | MS.gene67086:CDS |
GGTAGGTAAGGAGGAAGTCG+AGG | 0.553978 | 1.2:+3645995 | None:intergenic |
CGTATATGGATTGGAACTCT+CGG | 0.561736 | 1.2:-3643948 | MS.gene67086:CDS |
AGCTTGAGAAATGCAAGTAA+AGG | 0.562953 | 1.2:-3646229 | MS.gene67086:CDS |
GCTCTTGAAAGAACTAGTGC+CGG | 0.567580 | 1.2:+3645317 | None:intergenic |
ATTCCAGACAGATGCCATAC+GGG | 0.568320 | 1.2:+3644870 | None:intergenic |
CTACTAGTAGATGTTGCTGC+TGG | 0.568890 | 1.2:+3645607 | None:intergenic |
ACATAGGGAGGTAGGTAAGG+AGG | 0.573533 | 1.2:+3645986 | None:intergenic |
ATTCATAGAGAATGGCATAC+CGG | 0.575342 | 1.2:-3644296 | MS.gene67086:CDS |
TGAGGCTTTAGAGCCCATAA+GGG | 0.576333 | 1.2:+3644923 | None:intergenic |
TCACCTTGGAGTGGTATGGT+AGG | 0.577095 | 1.2:+3645583 | None:intergenic |
AGAAGCCATTAAATTGCTTG+AGG | 0.579617 | 1.2:-3643522 | MS.gene67086:CDS |
CTTACAAATTTGTAGTGATG+AGG | 0.584055 | 1.2:+3644084 | None:intergenic |
CTGTCTGGAATTTGGAAGGA+GGG | 0.586730 | 1.2:-3644858 | MS.gene67086:CDS |
CACTGTGCAGCAACAACCAA+GGG | 0.591111 | 1.2:-3645113 | MS.gene67086:intron |
GAAGAAGAAACTTAAGCATG+AGG | 0.593589 | 1.2:-3646071 | MS.gene67086:CDS |
AGTTTACACAGCATCTCAAG+TGG | 0.599640 | 1.2:-3643714 | MS.gene67086:CDS |
GCATCTGTCTGGAATTTGGA+AGG | 0.603446 | 1.2:-3644862 | MS.gene67086:CDS |
AAAACTCTGTTCCTTCAACA+CGG | 0.603502 | 1.2:+3644897 | None:intergenic |
AGTCGAGGTAAAGCTCCTAA+AGG | 0.603650 | 1.2:+3646010 | None:intergenic |
TTGAGAAATGCAAGTAAAGG+TGG | 0.603958 | 1.2:-3646226 | MS.gene67086:CDS |
TGATTTGTACAAATTGTGAG+AGG | 0.609783 | 1.2:+3643483 | None:intergenic |
ATTTGTACAAATTGTGAGAG+GGG | 0.610601 | 1.2:+3643485 | None:intergenic |
TGATCTTGCTCACCTTGGAG+TGG | 0.614879 | 1.2:+3645574 | None:intergenic |
GGCTGTCGCAATGATGCGGA+AGG | 0.616911 | 1.2:-3644260 | MS.gene67086:intron |
GAGAGAGCAAATGTAACTAG+AGG | 0.617913 | 1.2:+3643923 | None:intergenic |
GATTTGTACAAATTGTGAGA+GGG | 0.618972 | 1.2:+3643484 | None:intergenic |
GCCGCATCCTCCGAAAAGGA+AGG | 0.627959 | 1.2:-3645214 | MS.gene67086:intron |
CCAAAACAGACAATTTCCAA+GGG | 0.630640 | 1.2:-3644001 | MS.gene67086:intron |
TCATCAACTTACAGCAGGAG+AGG | 0.630956 | 1.2:+3643886 | None:intergenic |
GGTTTGCCAGATAATGGACA+AGG | 0.636373 | 1.2:-3645354 | MS.gene67086:intron |
TCTGTCTGGAATTTGGAAGG+AGG | 0.638154 | 1.2:-3644859 | MS.gene67086:CDS |
TTTCATTTACTAACATAGGG+AGG | 0.648425 | 1.2:+3645974 | None:intergenic |
CCACTGTGCAGCAACAACCA+AGG | 0.648777 | 1.2:-3645114 | MS.gene67086:intron |
AGGCCTACCATACCACTCCA+AGG | 0.669187 | 1.2:-3645586 | MS.gene67086:intron |
AAATGGCTGTCGCAATGATG+CGG | 0.681099 | 1.2:-3644264 | MS.gene67086:CDS |
GCATGAGGAGAATATTCACA+AGG | 0.698510 | 1.2:-3646056 | MS.gene67086:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATATATAATGTATTTTTTT+TGG | - | chr1.2:3645147-3645166 | MS.gene67086:intron | 10.0% |
!! | AAACATACATATTACTTAAA+AGG | + | chr1.2:3645907-3645926 | None:intergenic | 15.0% |
!! | AACATACATATTACTTAAAA+GGG | + | chr1.2:3645906-3645925 | None:intergenic | 15.0% |
!!! | AATTTTTTTTATGTGCATTT+TGG | - | chr1.2:3644305-3644324 | MS.gene67086:intron | 15.0% |
!!! | ATATAATGTATTTTTTTTGG+TGG | - | chr1.2:3645150-3645169 | MS.gene67086:intron | 15.0% |
!! | AATGCACATAAAAAAAATTC+AGG | + | chr1.2:3644304-3644323 | None:intergenic | 20.0% |
!! | TACTATACATAATATATGCA+AGG | + | chr1.2:3645198-3645217 | None:intergenic | 20.0% |
!! | TATTCAGCTTAATTAAGTAT+TGG | - | chr1.2:3644151-3644170 | MS.gene67086:CDS | 20.0% |
!! | TCATTTCATTTACTAACATA+GGG | + | chr1.2:3643712-3643731 | None:intergenic | 20.0% |
!! | TGAATAAGTGAAAAACATAA+TGG | + | chr1.2:3644137-3644156 | None:intergenic | 20.0% |
!! | TTAAATGCTAGAATTTGAAA+TGG | + | chr1.2:3645628-3645647 | None:intergenic | 20.0% |
!! | TTCAAATTCTAGCATTTAAA+TGG | - | chr1.2:3645629-3645648 | MS.gene67086:CDS | 20.0% |
!! | TTCATTTCATTTACTAACAT+AGG | + | chr1.2:3643713-3643732 | None:intergenic | 20.0% |
!! | TTCTCAAACTTTAATAGTAA+TGG | - | chr1.2:3645334-3645353 | MS.gene67086:CDS | 20.0% |
!!! | AAAGATAATTTTGTTTCATC+TGG | - | chr1.2:3645455-3645474 | MS.gene67086:intron | 20.0% |
!!! | GATTTGTTCAATAGTTTATA+TGG | - | chr1.2:3645491-3645510 | MS.gene67086:intron | 20.0% |
!!! | TCAACATGAAGATTTTTAAT+TGG | + | chr1.2:3644422-3644441 | None:intergenic | 20.0% |
! | AAAAGACTTAGAATCATTGA+TGG | - | chr1.2:3646098-3646117 | MS.gene67086:intron | 25.0% |
! | AAAATATGACATACTTCAAC+CGG | + | chr1.2:3644933-3644952 | None:intergenic | 25.0% |
! | ACAGCTAAATTTCTAATTCA+AGG | + | chr1.2:3644979-3644998 | None:intergenic | 25.0% |
! | ATTCACAATCATTAACTACA+TGG | + | chr1.2:3644535-3644554 | None:intergenic | 25.0% |
! | TCTTAAAATGAAATGCTCTA+TGG | + | chr1.2:3645573-3645592 | None:intergenic | 25.0% |
! | TTAAAGTTCTACTTTGATTC+AGG | - | chr1.2:3645360-3645379 | MS.gene67086:intron | 25.0% |
!! | AAATACCAATCCAAAAGTTT+TGG | + | chr1.2:3646066-3646085 | None:intergenic | 25.0% |
!! | AACTTGTATCTCAAATTTTC+TGG | - | chr1.2:3645234-3645253 | MS.gene67086:CDS | 25.0% |
!! | ATATTTTCCGAAATCACATT+TGG | + | chr1.2:3644661-3644680 | None:intergenic | 25.0% |
!! | CAGTAAAAACAAAGTATTTG+CGG | + | chr1.2:3644908-3644927 | None:intergenic | 25.0% |
!! | TATCTAAAGCTGAAATCATA+TGG | + | chr1.2:3646225-3646244 | None:intergenic | 25.0% |
!!! | TAATGTATTTTTTTTGGTGG+TGG | - | chr1.2:3645153-3645172 | MS.gene67086:intron | 25.0% |
AACAATGAACAGTCCTAAAT+TGG | - | chr1.2:3644012-3644031 | MS.gene67086:intron | 30.0% | |
AAGGGTAAAAGAACAGAAAA+TGG | - | chr1.2:3644585-3644604 | MS.gene67086:CDS | 30.0% | |
AATTGCACATAAATGCTTGT+AGG | + | chr1.2:3644857-3644876 | None:intergenic | 30.0% | |
ACACAGGCAAAAATAAATGT+TGG | - | chr1.2:3645524-3645543 | MS.gene67086:intron | 30.0% | |
ACTAATGCAATGAGACAAAT+TGG | + | chr1.2:3645859-3645878 | None:intergenic | 30.0% | |
AGCATCATAGATCATGATAA+AGG | + | chr1.2:3645933-3645952 | None:intergenic | 30.0% | |
AGGTGATAAATGTTCCAATT+TGG | + | chr1.2:3643966-3643985 | None:intergenic | 30.0% | |
AGTTGAATTCTGTGAATTAC+AGG | - | chr1.2:3643576-3643595 | MS.gene67086:CDS | 30.0% | |
ATTCAGGAATTCATAGAGAA+TGG | - | chr1.2:3645376-3645395 | MS.gene67086:intron | 30.0% | |
ATTGCACATAAATGCTTGTA+GGG | + | chr1.2:3644856-3644875 | None:intergenic | 30.0% | |
ATTTGTACAAATTGTGAGAG+GGG | + | chr1.2:3646198-3646217 | None:intergenic | 30.0% | |
CTTACAAATTTGTAGTGATG+AGG | + | chr1.2:3645599-3645618 | None:intergenic | 30.0% | |
GACTTCAATTCATCCAATTT+AGG | + | chr1.2:3644028-3644047 | None:intergenic | 30.0% | |
GATTTGTACAAATTGTGAGA+GGG | + | chr1.2:3646199-3646218 | None:intergenic | 30.0% | |
TACATAATATATGCAAGGTC+CGG | + | chr1.2:3645193-3645212 | None:intergenic | 30.0% | |
TCTTTCCTCAAGCAATTTAA+TGG | + | chr1.2:3646166-3646185 | None:intergenic | 30.0% | |
TTTCATTTACTAACATAGGG+AGG | + | chr1.2:3643709-3643728 | None:intergenic | 30.0% | |
! | AAACTTGCAGACTTCTTTTT+AGG | - | chr1.2:3645020-3645039 | MS.gene67086:CDS | 30.0% |
! | ACTTAGAATCATTGATGGAT+TGG | - | chr1.2:3646103-3646122 | MS.gene67086:intron | 30.0% |
! | ATGACAATTACCTTCCTTTT+CGG | + | chr1.2:3644479-3644498 | None:intergenic | 30.0% |
! | ATTTTCTGTTCTTTTACCCT+TGG | + | chr1.2:3644586-3644605 | None:intergenic | 30.0% |
! | CTATTCCAAAACTTTTGGAT+TGG | - | chr1.2:3646058-3646077 | MS.gene67086:CDS | 30.0% |
! | TGATTTGTACAAATTGTGAG+AGG | + | chr1.2:3646200-3646219 | None:intergenic | 30.0% |
!! | TAATTTTGTTTCATCTGGCT+AGG | - | chr1.2:3645460-3645479 | MS.gene67086:intron | 30.0% |
!! | TTTTGGAAGAGGAAATTGTT+TGG | - | chr1.2:3643870-3643889 | MS.gene67086:intron | 30.0% |
!!! | ATACTTTGTTTTTACTGCAC+CGG | - | chr1.2:3644911-3644930 | MS.gene67086:CDS | 30.0% |
!!! | ATCTGTGTTTTAGTACTAGT+AGG | - | chr1.2:3644497-3644516 | MS.gene67086:intron | 30.0% |
!!! | GTTTGCTATTCCAAAACTTT+TGG | - | chr1.2:3646053-3646072 | MS.gene67086:CDS | 30.0% |
AAAACTCTGTTCCTTCAACA+CGG | + | chr1.2:3644786-3644805 | None:intergenic | 35.0% | |
AAAGTTCAAACCCTATAGGA+CGG | - | chr1.2:3644234-3644253 | MS.gene67086:intron | 35.0% | |
AAGAGAAAGTTGTGCATTTC+AGG | - | chr1.2:3643897-3643916 | MS.gene67086:intron | 35.0% | |
ACATAATATATGCAAGGTCC+GGG | + | chr1.2:3645192-3645211 | None:intergenic | 35.0% | |
AGAAGCCATTAAATTGCTTG+AGG | - | chr1.2:3646158-3646177 | MS.gene67086:intron | 35.0% | |
AGAGCTTTCAATAGACCTTT+AGG | - | chr1.2:3643655-3643674 | MS.gene67086:CDS | 35.0% | |
AGCTTGAGAAATGCAAGTAA+AGG | - | chr1.2:3643451-3643470 | MS.gene67086:CDS | 35.0% | |
ATTACTCATCAACTTACAGC+AGG | + | chr1.2:3645802-3645821 | None:intergenic | 35.0% | |
ATTCATAGAGAATGGCATAC+CGG | - | chr1.2:3645384-3645403 | MS.gene67086:intron | 35.0% | |
ATTTACTAACATAGGGAGGT+AGG | + | chr1.2:3643705-3643724 | None:intergenic | 35.0% | |
CAACTTTCTTTCTATGGTTG+AGG | + | chr1.2:3643485-3643504 | None:intergenic | 35.0% | |
CAATGCCAACTTTCTTTCTA+TGG | + | chr1.2:3643491-3643510 | None:intergenic | 35.0% | |
CAGGCAAAAATAAATGTTGG+TGG | - | chr1.2:3645527-3645546 | MS.gene67086:intron | 35.0% | |
CCAAAACAGACAATTTCCAA+GGG | - | chr1.2:3645679-3645698 | MS.gene67086:CDS | 35.0% | |
CTCAACCATAGAAAGAAAGT+TGG | - | chr1.2:3643483-3643502 | MS.gene67086:CDS | 35.0% | |
GAAGAAGAAACTTAAGCATG+AGG | - | chr1.2:3643609-3643628 | MS.gene67086:CDS | 35.0% | |
GAAGCTAACTTCTGTTAACT+TGG | - | chr1.2:3645042-3645061 | MS.gene67086:CDS | 35.0% | |
GAGTACTTACAAGCAACAAT+TGG | - | chr1.2:3646015-3646034 | MS.gene67086:CDS | 35.0% | |
GCTGTTGTGTTTGAATTGTT+TGG | + | chr1.2:3643992-3644011 | None:intergenic | 35.0% | |
GTGTTTGAATTGTTTGGAAG+AGG | + | chr1.2:3643986-3644005 | None:intergenic | 35.0% | |
TATGTAGATACTAGCACTTC+TGG | - | chr1.2:3643835-3643854 | MS.gene67086:intron | 35.0% | |
TCCAAAACAGACAATTTCCA+AGG | - | chr1.2:3645678-3645697 | MS.gene67086:CDS | 35.0% | |
TGAATTCTGTGAATTACAGG+TGG | - | chr1.2:3643579-3643598 | MS.gene67086:CDS | 35.0% | |
TGACAAAGTTCAAACCCTAT+AGG | - | chr1.2:3644230-3644249 | MS.gene67086:intron | 35.0% | |
TGACTGTCCAAATGTGATTT+CGG | - | chr1.2:3644651-3644670 | MS.gene67086:CDS | 35.0% | |
TGATCTATGATGCTAAATGC+AGG | - | chr1.2:3645939-3645958 | MS.gene67086:intron | 35.0% | |
TTGAGAAATGCAAGTAAAGG+TGG | - | chr1.2:3643454-3643473 | MS.gene67086:CDS | 35.0% | |
! | ATATGGTTTTCTTGTGACAC+AGG | - | chr1.2:3645508-3645527 | MS.gene67086:intron | 35.0% |
! | ATCAAGAGAAGCTTGCATTT+TGG | - | chr1.2:3645077-3645096 | MS.gene67086:CDS | 35.0% |
! | ATGATAGCAAGAAGCGTATA+TGG | - | chr1.2:3645718-3645737 | MS.gene67086:CDS | 35.0% |
! | CATTTTACAACCGTCCTATA+GGG | + | chr1.2:3644247-3644266 | None:intergenic | 35.0% |
! | TCATTTTACAACCGTCCTAT+AGG | + | chr1.2:3644248-3644267 | None:intergenic | 35.0% |
! | TCTTTTCCTTGTCCATTATC+TGG | + | chr1.2:3644335-3644354 | None:intergenic | 35.0% |
! | TGCTAGAATTTGAAATGGAC+AGG | + | chr1.2:3645623-3645642 | None:intergenic | 35.0% |
! | TGCTTGTAAGTACTCTCTTT+TGG | + | chr1.2:3646010-3646029 | None:intergenic | 35.0% |
! | TGTTGAAGGAACAGAGTTTT+GGG | - | chr1.2:3644786-3644805 | MS.gene67086:CDS | 35.0% |
!! | GTCATCTTCTAAGACCAAAT+TGG | - | chr1.2:3643949-3643968 | MS.gene67086:CDS | 35.0% |
!! | TGATCAGAAGTGTCACTTTA+TGG | - | chr1.2:3644265-3644284 | MS.gene67086:CDS | 35.0% |
!!! | CATTTTGGTTTGCCAGATAA+TGG | - | chr1.2:3644320-3644339 | MS.gene67086:intron | 35.0% |
!!! | TTGTCTGTTTTGGAATTCAG+TGG | + | chr1.2:3645672-3645691 | None:intergenic | 35.0% |
AATTCCAGACAGATGCCATA+CGG | + | chr1.2:3644814-3644833 | None:intergenic | 40.0% | |
ACTTCTACTCATTTGCTTGG+AGG | + | chr1.2:3644399-3644418 | None:intergenic | 40.0% | |
AGTCAGCTTCAGTTGACATT+TGG | + | chr1.2:3644636-3644655 | None:intergenic | 40.0% | |
AGTTTACACAGCATCTCAAG+TGG | - | chr1.2:3645966-3645985 | MS.gene67086:intron | 40.0% | |
ATCTCAAGTGGAGAATGAAC+TGG | - | chr1.2:3645978-3645997 | MS.gene67086:intron | 40.0% | |
CAAGGAAAAGAGAATCGATC+CGG | - | chr1.2:3644344-3644363 | MS.gene67086:intron | 40.0% | |
CATAATATATGCAAGGTCCG+GGG | + | chr1.2:3645191-3645210 | None:intergenic | 40.0% | |
CTTCAGTTACCAAGTGAACT+GGG | - | chr1.2:3646132-3646151 | MS.gene67086:intron | 40.0% | |
CTTCTACTCATTTGCTTGGA+GGG | + | chr1.2:3644398-3644417 | None:intergenic | 40.0% | |
GAATTTGGAAGGAGGGATAT+TGG | - | chr1.2:3644829-3644848 | MS.gene67086:CDS | 40.0% | |
GAGAGAGCAAATGTAACTAG+AGG | + | chr1.2:3645760-3645779 | None:intergenic | 40.0% | |
GCATGAGGAGAATATTCACA+AGG | - | chr1.2:3643624-3643643 | MS.gene67086:CDS | 40.0% | |
GTTACATTTGCTCTCTCTTG+TGG | - | chr1.2:3645763-3645782 | MS.gene67086:CDS | 40.0% | |
TGAATTGATCTTGCTCACCT+TGG | + | chr1.2:3644114-3644133 | None:intergenic | 40.0% | |
TGGACTTCTACTCATTTGCT+TGG | + | chr1.2:3644402-3644421 | None:intergenic | 40.0% | |
! | ACAATTACCTTCCTTTTCGG+AGG | + | chr1.2:3644476-3644495 | None:intergenic | 40.0% |
! | AGCAAGAAGCGTATATGGAT+TGG | - | chr1.2:3645723-3645742 | MS.gene67086:CDS | 40.0% |
! | ATCATGATTTTTCGCTCCCT+TGG | + | chr1.2:3645698-3645717 | None:intergenic | 40.0% |
! | ATGAGTTCAGTGAAGTATCC+AGG | - | chr1.2:3644712-3644731 | MS.gene67086:intron | 40.0% |
! | CAAGCTTCTCTTGATGATTG+AGG | + | chr1.2:3645072-3645091 | None:intergenic | 40.0% |
! | CCCTTGGAAATTGTCTGTTT+TGG | + | chr1.2:3645682-3645701 | None:intergenic | 40.0% |
! | GTGTTGAAGGAACAGAGTTT+TGG | - | chr1.2:3644785-3644804 | MS.gene67086:CDS | 40.0% |
! | TATGGCATCTGTCTGGAATT+TGG | - | chr1.2:3644814-3644833 | MS.gene67086:CDS | 40.0% |
!! | CGTATATGGATTGGAACTCT+CGG | - | chr1.2:3645732-3645751 | MS.gene67086:CDS | 40.0% |
!!! | GTATTTTTTTTGGTGGTGGC+CGG | - | chr1.2:3645157-3645176 | MS.gene67086:intron | 40.0% |
!!! | TATTTTTTTTGGTGGTGGCC+GGG | - | chr1.2:3645158-3645177 | MS.gene67086:intron | 40.0% |
AAATGGCTGTCGCAATGATG+CGG | - | chr1.2:3645416-3645435 | MS.gene67086:intron | 45.0% | |
AAGCCTCAAAACCGTGTTGA+AGG | - | chr1.2:3644772-3644791 | MS.gene67086:CDS | 45.0% | |
ACAGCCATTTCAGGACTATC+CGG | + | chr1.2:3645406-3645425 | None:intergenic | 45.0% | |
AGTCGAGGTAAAGCTCCTAA+AGG | + | chr1.2:3643673-3643692 | None:intergenic | 45.0% | |
AGTGGAGAATGAACTGGAAG+TGG | - | chr1.2:3645984-3646003 | MS.gene67086:intron | 45.0% | |
ATCATTGCGACAGCCATTTC+AGG | + | chr1.2:3645415-3645434 | None:intergenic | 45.0% | |
ATTCCAGACAGATGCCATAC+GGG | + | chr1.2:3644813-3644832 | None:intergenic | 45.0% | |
CAGCAGCAACATCTACTAGT+AGG | - | chr1.2:3644074-3644093 | MS.gene67086:intron | 45.0% | |
CATACCGGATAGTCCTGAAA+TGG | - | chr1.2:3645399-3645418 | MS.gene67086:intron | 45.0% | |
CCTTCAGTTACCAAGTGAAC+TGG | - | chr1.2:3646131-3646150 | MS.gene67086:intron | 45.0% | |
CGACATATCATCGCCCTTAT+GGG | - | chr1.2:3644744-3644763 | MS.gene67086:intron | 45.0% | |
CTAACATAGGGAGGTAGGTA+AGG | + | chr1.2:3643700-3643719 | None:intergenic | 45.0% | |
CTACTAGTAGATGTTGCTGC+TGG | + | chr1.2:3644076-3644095 | None:intergenic | 45.0% | |
GAAAGTTGTGCATTTCAGGC+AGG | - | chr1.2:3643901-3643920 | MS.gene67086:CDS | 45.0% | |
GCTCTTGAAAGAACTAGTGC+CGG | + | chr1.2:3644366-3644385 | None:intergenic | 45.0% | |
GGTTTGAACTTTGTCACTCG+AGG | + | chr1.2:3644226-3644245 | None:intergenic | 45.0% | |
GTATTGGAGTTTAGTCCTCG+TGG | - | chr1.2:3644167-3644186 | MS.gene67086:intron | 45.0% | |
TCATCAACTTACAGCAGGAG+AGG | + | chr1.2:3645797-3645816 | None:intergenic | 45.0% | |
TGCAATGAGACAAATTGGCG+CGG | + | chr1.2:3645854-3645873 | None:intergenic | 45.0% | |
TTGCTCTCTCTTGTGGAACT+TGG | - | chr1.2:3645770-3645789 | MS.gene67086:CDS | 45.0% | |
! | CCAGTTCACTTGGTAACTGA+AGG | + | chr1.2:3646134-3646153 | None:intergenic | 45.0% |
! | CTGTCTGGAATTTGGAAGGA+GGG | - | chr1.2:3644822-3644841 | MS.gene67086:CDS | 45.0% |
! | GCATCTGTCTGGAATTTGGA+AGG | - | chr1.2:3644818-3644837 | MS.gene67086:CDS | 45.0% |
! | GCTTCAGTTGACATTTGGTG+TGG | + | chr1.2:3644631-3644650 | None:intergenic | 45.0% |
! | GCTTCTTTTCCCAGTTCACT+TGG | + | chr1.2:3646144-3646163 | None:intergenic | 45.0% |
! | GTTCCTTCAACACGGTTTTG+AGG | + | chr1.2:3644778-3644797 | None:intergenic | 45.0% |
! | TCTGTCTGGAATTTGGAAGG+AGG | - | chr1.2:3644821-3644840 | MS.gene67086:CDS | 45.0% |
!! | GGTTTGCCAGATAATGGACA+AGG | - | chr1.2:3644326-3644345 | MS.gene67086:intron | 45.0% |
!! | GTTGACATTTGGTGTGGACT+AGG | + | chr1.2:3644625-3644644 | None:intergenic | 45.0% |
!! | TGAGGCTTTAGAGCCCATAA+GGG | + | chr1.2:3644760-3644779 | None:intergenic | 45.0% |
!! | TTGAGGCTTTAGAGCCCATA+AGG | + | chr1.2:3644761-3644780 | None:intergenic | 45.0% |
!!! | ATTTTTTTTGGTGGTGGCCG+GGG | - | chr1.2:3645159-3645178 | MS.gene67086:intron | 45.0% |
!!! | TGAAGTGGCAGTTTTGGAAG+AGG | - | chr1.2:3643859-3643878 | MS.gene67086:intron | 45.0% |
AAAAGCCGCATCCTCCGAAA+AGG | - | chr1.2:3644462-3644481 | MS.gene67086:intron | 50.0% | |
ACATAGGGAGGTAGGTAAGG+AGG | + | chr1.2:3643697-3643716 | None:intergenic | 50.0% | |
CACTGTGCAGCAACAACCAA+GGG | - | chr1.2:3644567-3644586 | MS.gene67086:intron | 50.0% | |
CTTGGTTGTTGCTGCACAGT+GGG | + | chr1.2:3644568-3644587 | None:intergenic | 50.0% | |
GCGACATATCATCGCCCTTA+TGG | - | chr1.2:3644743-3644762 | MS.gene67086:intron | 50.0% | |
TCACCTTGGAGTGGTATGGT+AGG | + | chr1.2:3644100-3644119 | None:intergenic | 50.0% | |
TCGCAATGATGCGGAAGGTA+TGG | - | chr1.2:3645425-3645444 | MS.gene67086:intron | 50.0% | |
TGATCTTGCTCACCTTGGAG+TGG | + | chr1.2:3644109-3644128 | None:intergenic | 50.0% | |
TTGCTCACCTTGGAGTGGTA+TGG | + | chr1.2:3644104-3644123 | None:intergenic | 50.0% | |
! | ACCTTCCTTTTCGGAGGATG+CGG | + | chr1.2:3644470-3644489 | None:intergenic | 50.0% |
! | ACTAGCACTTCTGGCTGAAG+TGG | - | chr1.2:3643844-3643863 | MS.gene67086:intron | 50.0% |
! | GTGAAGTATCCAGGTTCTCC+AGG | - | chr1.2:3644721-3644740 | MS.gene67086:intron | 50.0% |
! | TCTGGCTGAAGTGGCAGTTT+TGG | - | chr1.2:3643853-3643872 | MS.gene67086:intron | 50.0% |
!!! | ACAGAGTTTTGGGACCCGTA+TGG | - | chr1.2:3644796-3644815 | MS.gene67086:CDS | 50.0% |
AAGGGCGATGATATGTCGCC+TGG | + | chr1.2:3644742-3644761 | None:intergenic | 55.0% | |
AGGCCTACCATACCACTCCA+AGG | - | chr1.2:3644094-3644113 | MS.gene67086:CDS | 55.0% | |
CCACTGTGCAGCAACAACCA+AGG | - | chr1.2:3644566-3644585 | MS.gene67086:intron | 55.0% | |
CCTTGGTTGTTGCTGCACAG+TGG | + | chr1.2:3644569-3644588 | None:intergenic | 55.0% | |
GACAAATTGGCGCGGAGCTT+TGG | + | chr1.2:3645846-3645865 | None:intergenic | 55.0% | |
GATATGTCGCCTGGAGAACC+TGG | + | chr1.2:3644733-3644752 | None:intergenic | 55.0% | |
GGTAGGTAAGGAGGAAGTCG+AGG | + | chr1.2:3643688-3643707 | None:intergenic | 55.0% | |
! | ACCACTGAGTTGACACCACG+AGG | + | chr1.2:3644185-3644204 | None:intergenic | 55.0% |
! | TCCTCGTGGTGTCAACTCAG+TGG | - | chr1.2:3644181-3644200 | MS.gene67086:intron | 55.0% |
AAGGTCCGGGGTTCAAACCC+CGG | + | chr1.2:3645179-3645198 | None:intergenic | 60.0% | |
GCCGCATCCTCCGAAAAGGA+AGG | - | chr1.2:3644466-3644485 | MS.gene67086:intron | 60.0% | |
GGACCCGTATGGCATCTGTC+TGG | - | chr1.2:3644807-3644826 | MS.gene67086:CDS | 60.0% | |
GGCTGTCGCAATGATGCGGA+AGG | - | chr1.2:3645420-3645439 | MS.gene67086:intron | 60.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | - | chr1.2:3645171-3645190 | MS.gene67086:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 3643442 | 3646260 | 3643442 | ID=MS.gene67086 |
chr1.2 | mRNA | 3643442 | 3646260 | 3643442 | ID=MS.gene67086.t1;Parent=MS.gene67086 |
chr1.2 | exon | 3646183 | 3646260 | 3646183 | ID=MS.gene67086.t1.exon1;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3646183 | 3646260 | 3646183 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3645988 | 3646104 | 3645988 | ID=MS.gene67086.t1.exon2;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3645988 | 3646104 | 3645988 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3645587 | 3645860 | 3645587 | ID=MS.gene67086.t1.exon3;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3645587 | 3645860 | 3645587 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3645215 | 3645366 | 3645215 | ID=MS.gene67086.t1.exon4;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3645215 | 3645366 | 3645215 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3644764 | 3645125 | 3644764 | ID=MS.gene67086.t1.exon5;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3644764 | 3645125 | 3644764 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3644573 | 3644672 | 3644573 | ID=MS.gene67086.t1.exon6;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3644573 | 3644672 | 3644573 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3644261 | 3644320 | 3644261 | ID=MS.gene67086.t1.exon7;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3644261 | 3644320 | 3644261 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3644089 | 3644172 | 3644089 | ID=MS.gene67086.t1.exon8;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3644089 | 3644172 | 3644089 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3643898 | 3644014 | 3643898 | ID=MS.gene67086.t1.exon9;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3643898 | 3644014 | 3643898 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
chr1.2 | exon | 3643442 | 3643741 | 3643442 | ID=MS.gene67086.t1.exon10;Parent=MS.gene67086.t1 |
chr1.2 | CDS | 3643442 | 3643741 | 3643442 | ID=cds.MS.gene67086.t1;Parent=MS.gene67086.t1 |
Gene Sequence |
Protein sequence |