Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042077.t1 | XP_013458674.1 | 99.3 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.00E+00 | 1183.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042077.t1 | Q9FIK1 | 61.7 | 519 | 193 | 4 | 1 | 516 | 1 | 516 | 1.0e-185 | 651.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042077.t1 | G7ZZV4 | 99.3 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.0e+00 | 1183.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042077 | MS.gene86230 | PPI |
| MS.gene042077 | MS.gene44279 | PPI |
| MS.gene042077 | MS.gene29159 | PPI |
| MS.gene042077 | MS.gene027737 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042077.t1 | MTR_4g134210 | 99.339 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1242 |
| MS.gene042077.t1 | MTR_2g027410 | 67.110 | 602 | 165 | 6 | 1 | 600 | 1 | 571 | 0.0 | 808 |
| MS.gene042077.t1 | MTR_2g027410 | 66.604 | 530 | 144 | 6 | 73 | 600 | 1 | 499 | 0.0 | 702 |
| MS.gene042077.t1 | MTR_5g032780 | 48.467 | 522 | 223 | 6 | 1 | 477 | 1 | 521 | 4.35e-162 | 478 |
| MS.gene042077.t1 | MTR_8g069330 | 46.535 | 505 | 223 | 6 | 1 | 477 | 1 | 486 | 1.68e-144 | 431 |
| MS.gene042077.t1 | MTR_5g015790 | 42.771 | 498 | 249 | 8 | 1 | 476 | 1 | 484 | 4.89e-133 | 403 |
| MS.gene042077.t1 | MTR_1g014070 | 41.212 | 495 | 260 | 7 | 1 | 473 | 1 | 486 | 6.55e-131 | 397 |
| MS.gene042077.t1 | MTR_1g106430 | 39.279 | 499 | 264 | 7 | 1 | 473 | 1 | 486 | 1.25e-121 | 374 |
| MS.gene042077.t1 | MTR_4g093850 | 37.266 | 534 | 277 | 9 | 5 | 484 | 23 | 552 | 1.31e-112 | 351 |
| MS.gene042077.t1 | MTR_2g009340 | 36.535 | 531 | 280 | 7 | 5 | 479 | 23 | 552 | 7.92e-108 | 339 |
| MS.gene042077.t1 | MTR_2g018750 | 35.341 | 498 | 295 | 6 | 1 | 473 | 1 | 496 | 8.14e-98 | 311 |
| MS.gene042077.t1 | MTR_5g016060 | 35.269 | 465 | 283 | 7 | 22 | 475 | 36 | 493 | 3.85e-93 | 299 |
| MS.gene042077.t1 | MTR_4g022330 | 35.974 | 467 | 275 | 6 | 25 | 475 | 33 | 491 | 3.71e-91 | 294 |
| MS.gene042077.t1 | MTR_4g093850 | 35.565 | 478 | 252 | 8 | 5 | 430 | 23 | 496 | 1.07e-90 | 290 |
| MS.gene042077.t1 | MTR_4g095430 | 36.364 | 462 | 279 | 7 | 23 | 475 | 10 | 465 | 2.67e-90 | 291 |
| MS.gene042077.t1 | MTR_8g090220 | 34.440 | 482 | 268 | 8 | 19 | 471 | 45 | 507 | 1.91e-89 | 286 |
| MS.gene042077.t1 | MTR_8g090220 | 33.333 | 537 | 299 | 10 | 19 | 526 | 45 | 551 | 4.33e-89 | 289 |
| MS.gene042077.t1 | MTR_2g084595 | 35.504 | 476 | 279 | 9 | 24 | 473 | 21 | 494 | 1.76e-87 | 285 |
| MS.gene042077.t1 | MTR_8g078900 | 33.068 | 502 | 279 | 8 | 23 | 473 | 17 | 512 | 6.55e-87 | 284 |
| MS.gene042077.t1 | MTR_1g064360 | 32.460 | 496 | 293 | 9 | 1 | 473 | 1 | 477 | 1.44e-86 | 280 |
| MS.gene042077.t1 | MTR_1g094850 | 33.068 | 502 | 301 | 7 | 1 | 475 | 1 | 494 | 2.53e-86 | 281 |
| MS.gene042077.t1 | MTR_3g062540 | 32.391 | 460 | 288 | 5 | 21 | 475 | 19 | 460 | 1.82e-84 | 275 |
| MS.gene042077.t1 | MTR_2g048390 | 35.088 | 456 | 262 | 10 | 1 | 425 | 1 | 453 | 2.72e-81 | 263 |
| MS.gene042077.t1 | MTR_8g078900 | 32.787 | 488 | 271 | 8 | 37 | 473 | 1 | 482 | 8.44e-81 | 267 |
| MS.gene042077.t1 | MTR_7g108290 | 33.155 | 561 | 309 | 13 | 17 | 532 | 27 | 566 | 3.31e-79 | 264 |
| MS.gene042077.t1 | MTR_8g078900 | 34.096 | 437 | 251 | 7 | 68 | 473 | 42 | 472 | 3.21e-78 | 260 |
| MS.gene042077.t1 | MTR_5g075640 | 31.723 | 476 | 295 | 4 | 22 | 484 | 21 | 479 | 1.00e-77 | 257 |
| MS.gene042077.t1 | MTR_1g088885 | 32.014 | 556 | 319 | 12 | 17 | 532 | 27 | 563 | 1.38e-77 | 258 |
| MS.gene042077.t1 | MTR_3g062540 | 32.644 | 435 | 270 | 5 | 46 | 475 | 2 | 418 | 4.22e-76 | 251 |
| MS.gene042077.t1 | MTR_7g073980 | 32.632 | 475 | 297 | 10 | 14 | 473 | 21 | 487 | 2.19e-74 | 250 |
| MS.gene042077.t1 | MTR_1g082690 | 31.347 | 453 | 271 | 9 | 28 | 473 | 60 | 479 | 3.53e-72 | 242 |
| MS.gene042077.t1 | MTR_2g084595 | 34.112 | 428 | 254 | 9 | 24 | 425 | 21 | 446 | 1.88e-70 | 234 |
| MS.gene042077.t1 | MTR_5g075640 | 30.752 | 452 | 283 | 4 | 46 | 484 | 2 | 436 | 1.01e-67 | 229 |
| MS.gene042077.t1 | MTR_8g078900 | 30.396 | 454 | 259 | 8 | 23 | 425 | 17 | 464 | 3.39e-64 | 218 |
| MS.gene042077.t1 | MTR_5g016060 | 32.898 | 383 | 239 | 7 | 104 | 475 | 4 | 379 | 1.07e-62 | 216 |
| MS.gene042077.t1 | MTR_8g078900 | 31.105 | 389 | 231 | 7 | 68 | 425 | 42 | 424 | 6.01e-56 | 195 |
| MS.gene042077.t1 | MTR_4g011530 | 36.207 | 290 | 168 | 5 | 201 | 485 | 46 | 323 | 1.03e-49 | 179 |
| MS.gene042077.t1 | MTR_2g102730 | 36.364 | 297 | 176 | 4 | 183 | 475 | 6 | 293 | 2.62e-49 | 177 |
| MS.gene042077.t1 | MTR_4g045767 | 30.394 | 431 | 257 | 14 | 60 | 475 | 40 | 442 | 9.29e-43 | 162 |
| MS.gene042077.t1 | MTR_4g074190 | 25.971 | 489 | 302 | 12 | 29 | 480 | 6 | 471 | 5.39e-37 | 145 |
| MS.gene042077.t1 | MTR_4g080720 | 87.143 | 70 | 9 | 0 | 1 | 70 | 1 | 70 | 4.37e-36 | 130 |
| MS.gene042077.t1 | MTR_4g074190 | 26.009 | 446 | 274 | 10 | 68 | 480 | 3 | 425 | 2.32e-35 | 140 |
| MS.gene042077.t1 | MTR_1g035720 | 26.087 | 483 | 290 | 12 | 29 | 474 | 6 | 458 | 1.22e-32 | 132 |
| MS.gene042077.t1 | MTR_4g074190 | 25.977 | 435 | 262 | 12 | 29 | 426 | 6 | 417 | 2.29e-31 | 127 |
| MS.gene042077.t1 | MTR_2g010890 | 25.798 | 376 | 240 | 12 | 100 | 461 | 8 | 358 | 1.48e-25 | 110 |
| MS.gene042077.t1 | MTR_6g046500 | 87.755 | 49 | 6 | 0 | 22 | 70 | 1 | 49 | 1.97e-22 | 90.9 |
| MS.gene042077.t1 | MTR_1g105870 | 31.579 | 190 | 122 | 2 | 33 | 220 | 38 | 221 | 4.48e-22 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042077.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
| MS.gene042077.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
| MS.gene042077.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
| MS.gene042077.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 114 | 596 | 0.0 | 672 |
| MS.gene042077.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 5.44e-151 | 449 |
| MS.gene042077.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 5.44e-151 | 449 |
| MS.gene042077.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 5.44e-151 | 449 |
| MS.gene042077.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 5.44e-151 | 449 |
| MS.gene042077.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 5.44e-151 | 449 |
| MS.gene042077.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 5.44e-151 | 449 |
| MS.gene042077.t1 | AT4G31820 | 39.139 | 534 | 276 | 10 | 1 | 511 | 1 | 508 | 2.95e-126 | 384 |
| MS.gene042077.t1 | AT3G26490 | 38.333 | 540 | 271 | 11 | 1 | 493 | 1 | 525 | 5.50e-125 | 381 |
| MS.gene042077.t1 | AT3G26490 | 38.333 | 540 | 271 | 11 | 1 | 493 | 1 | 525 | 5.50e-125 | 381 |
| MS.gene042077.t1 | AT3G26490 | 38.333 | 540 | 271 | 11 | 1 | 493 | 1 | 525 | 5.50e-125 | 381 |
| MS.gene042077.t1 | AT2G14820 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 7.28e-124 | 379 |
| MS.gene042077.t1 | AT2G14820 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 7.28e-124 | 379 |
| MS.gene042077.t1 | AT4G37590 | 39.736 | 531 | 273 | 12 | 1 | 513 | 1 | 502 | 2.94e-121 | 371 |
| MS.gene042077.t1 | AT5G67440 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 3.47e-121 | 371 |
| MS.gene042077.t1 | AT5G67440 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 3.47e-121 | 371 |
| MS.gene042077.t1 | AT2G23050 | 40.568 | 493 | 248 | 9 | 1 | 483 | 1 | 458 | 7.71e-120 | 364 |
| MS.gene042077.t1 | AT4G31820 | 38.462 | 481 | 248 | 9 | 53 | 511 | 1 | 455 | 4.58e-109 | 337 |
| MS.gene042077.t1 | AT5G67440 | 39.955 | 443 | 254 | 5 | 41 | 477 | 5 | 441 | 3.50e-106 | 331 |
| MS.gene042077.t1 | AT3G26490 | 37.759 | 482 | 233 | 12 | 1 | 435 | 1 | 462 | 1.43e-101 | 318 |
| MS.gene042077.t1 | AT5G64330 | 32.483 | 588 | 283 | 9 | 7 | 484 | 33 | 616 | 6.45e-95 | 305 |
| MS.gene042077.t1 | AT5G64330 | 32.483 | 588 | 283 | 9 | 7 | 484 | 33 | 616 | 1.13e-94 | 306 |
| MS.gene042077.t1 | AT1G30440 | 34.047 | 514 | 290 | 8 | 1 | 473 | 1 | 506 | 1.84e-91 | 296 |
| MS.gene042077.t1 | AT5G03250 | 33.002 | 503 | 304 | 7 | 1 | 473 | 1 | 500 | 3.34e-90 | 291 |
| MS.gene042077.t1 | AT5G67385 | 34.542 | 469 | 291 | 8 | 23 | 482 | 22 | 483 | 4.11e-90 | 291 |
| MS.gene042077.t1 | AT5G13600 | 34.337 | 498 | 295 | 9 | 1 | 473 | 1 | 491 | 5.26e-86 | 280 |
| MS.gene042077.t1 | AT5G66560 | 33.398 | 515 | 277 | 8 | 23 | 473 | 16 | 528 | 3.50e-85 | 280 |
| MS.gene042077.t1 | AT5G64330 | 31.957 | 557 | 265 | 9 | 38 | 484 | 5 | 557 | 4.51e-85 | 278 |
| MS.gene042077.t1 | AT5G48800 | 34.542 | 469 | 265 | 7 | 25 | 475 | 40 | 484 | 8.27e-84 | 275 |
| MS.gene042077.t1 | AT2G23050 | 39.523 | 377 | 189 | 7 | 111 | 483 | 1 | 342 | 3.78e-83 | 265 |
| MS.gene042077.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.36e-82 | 270 |
| MS.gene042077.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.36e-82 | 270 |
| MS.gene042077.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.36e-82 | 270 |
| MS.gene042077.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.36e-82 | 270 |
| MS.gene042077.t1 | AT5G10250 | 29.268 | 574 | 337 | 9 | 5 | 540 | 29 | 571 | 2.00e-82 | 271 |
| MS.gene042077.t1 | AT5G66560 | 35.915 | 426 | 251 | 6 | 68 | 473 | 66 | 489 | 1.11e-81 | 269 |
| MS.gene042077.t1 | AT5G66560 | 35.915 | 426 | 251 | 6 | 68 | 473 | 76 | 499 | 1.66e-81 | 269 |
| MS.gene042077.t1 | AT5G10250 | 29.433 | 564 | 334 | 9 | 5 | 540 | 29 | 556 | 4.74e-81 | 267 |
| MS.gene042077.t1 | AT2G30520 | 32.112 | 464 | 287 | 6 | 21 | 475 | 25 | 469 | 1.79e-80 | 265 |
| MS.gene042077.t1 | AT3G44820 | 31.800 | 500 | 300 | 9 | 13 | 473 | 10 | 507 | 1.23e-76 | 256 |
| MS.gene042077.t1 | AT1G03010 | 31.588 | 554 | 320 | 10 | 24 | 532 | 7 | 546 | 9.58e-76 | 253 |
| MS.gene042077.t1 | AT3G50840 | 34.755 | 469 | 278 | 9 | 16 | 473 | 6 | 457 | 1.04e-75 | 252 |
| MS.gene042077.t1 | AT1G03010 | 31.588 | 554 | 320 | 10 | 24 | 532 | 34 | 573 | 1.26e-75 | 253 |
| MS.gene042077.t1 | AT1G03010 | 31.393 | 567 | 328 | 11 | 11 | 532 | 22 | 572 | 1.36e-75 | 253 |
| MS.gene042077.t1 | AT3G49970 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 5.73e-74 | 246 |
| MS.gene042077.t1 | AT3G49970 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 5.73e-74 | 246 |
| MS.gene042077.t1 | AT2G30520 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 4.87e-72 | 241 |
| MS.gene042077.t1 | AT2G30520 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 4.87e-72 | 241 |
| MS.gene042077.t1 | AT3G08660 | 31.078 | 473 | 286 | 11 | 10 | 473 | 23 | 464 | 3.30e-70 | 238 |
| MS.gene042077.t1 | AT3G08570 | 30.818 | 477 | 304 | 10 | 13 | 473 | 22 | 488 | 9.24e-69 | 234 |
| MS.gene042077.t1 | AT2G47860 | 30.146 | 481 | 288 | 9 | 23 | 475 | 34 | 494 | 7.82e-66 | 227 |
| MS.gene042077.t1 | AT3G50840 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 2.44e-65 | 223 |
| MS.gene042077.t1 | AT3G50840 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 2.44e-65 | 223 |
| MS.gene042077.t1 | AT5G66560 | 31.049 | 467 | 256 | 8 | 23 | 425 | 16 | 480 | 6.15e-63 | 215 |
| MS.gene042077.t1 | AT3G08660 | 31.163 | 430 | 261 | 10 | 53 | 473 | 1 | 404 | 1.10e-61 | 213 |
| MS.gene042077.t1 | AT2G47860 | 28.770 | 504 | 288 | 10 | 23 | 475 | 34 | 517 | 7.12e-61 | 214 |
| MS.gene042077.t1 | AT5G03250 | 29.923 | 391 | 243 | 6 | 111 | 473 | 1 | 388 | 1.41e-54 | 193 |
| MS.gene042077.t1 | AT3G08660 | 29.812 | 426 | 259 | 11 | 10 | 426 | 23 | 417 | 1.86e-52 | 186 |
| MS.gene042077.t1 | AT1G52770 | 36.860 | 293 | 164 | 6 | 201 | 483 | 28 | 309 | 6.01e-49 | 177 |
| MS.gene042077.t1 | AT2G47860 | 29.234 | 431 | 257 | 9 | 23 | 425 | 34 | 444 | 1.89e-48 | 175 |
| MS.gene042077.t1 | AT2G47860 | 27.753 | 454 | 257 | 10 | 23 | 425 | 34 | 467 | 7.56e-44 | 163 |
| MS.gene042077.t1 | AT3G03510 | 30.424 | 401 | 223 | 12 | 80 | 473 | 8 | 359 | 5.00e-43 | 160 |
| MS.gene042077.t1 | AT3G15570 | 34.643 | 280 | 162 | 5 | 209 | 475 | 37 | 308 | 1.72e-42 | 159 |
| MS.gene042077.t1 | AT5G48130 | 27.133 | 457 | 296 | 12 | 26 | 473 | 39 | 467 | 2.72e-42 | 161 |
| MS.gene042077.t1 | AT2G47860 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 5.13e-41 | 156 |
| MS.gene042077.t1 | AT2G47860 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 5.13e-41 | 156 |
| MS.gene042077.t1 | AT3G19850 | 26.722 | 479 | 296 | 11 | 29 | 473 | 6 | 463 | 2.73e-40 | 155 |
| MS.gene042077.t1 | AT1G50280 | 27.626 | 438 | 278 | 11 | 67 | 483 | 17 | 436 | 1.13e-39 | 152 |
| MS.gene042077.t1 | AT1G50280 | 27.079 | 469 | 302 | 12 | 28 | 469 | 5 | 460 | 1.76e-39 | 152 |
| MS.gene042077.t1 | AT5G17580 | 27.468 | 466 | 300 | 12 | 21 | 473 | 15 | 455 | 8.82e-39 | 150 |
| MS.gene042077.t1 | AT5G17580 | 27.527 | 465 | 299 | 12 | 22 | 473 | 1 | 440 | 2.89e-38 | 149 |
| MS.gene042077.t1 | AT3G22104 | 28.414 | 454 | 261 | 14 | 28 | 458 | 6 | 418 | 5.57e-34 | 136 |
| MS.gene042077.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.26e-24 | 106 |
| MS.gene042077.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.26e-24 | 106 |
| MS.gene042077.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.26e-24 | 106 |
Find 107 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTCCACCACAGCTTAT+TGG | 0.257853 | 8.3:-483207 | MS.gene042077:CDS |
| TCTTTAGGACAAGAGTTTAA+TGG | 0.264714 | 8.3:-481686 | MS.gene042077:CDS |
| CAATAGAGTCATTCATTCTA+AGG | 0.299238 | 8.3:+483644 | None:intergenic |
| AAACAACATGAAATAATTCT+AGG | 0.300269 | 8.3:-481752 | MS.gene042077:CDS |
| GTCCTAAAGATTGTTTGCTT+TGG | 0.314234 | 8.3:+481699 | None:intergenic |
| TGGAAACTTTCTTGAAGCTT+TGG | 0.319994 | 8.3:-482837 | MS.gene042077:CDS |
| ATCAGAACATAGCATGAAAA+AGG | 0.330713 | 8.3:-481432 | MS.gene042077:CDS |
| ACGGCATGGCCACGTACTTC+TGG | 0.332882 | 8.3:+481869 | None:intergenic |
| AGCTGCACTACAGTTCTTAA+TGG | 0.333339 | 8.3:+481830 | None:intergenic |
| CTATGCATGCCGGTGGTTAC+CGG | 0.333749 | 8.3:-483169 | MS.gene042077:CDS |
| ATTGAGAAGGGAAACTTTGT+AGG | 0.333990 | 8.3:-483625 | MS.gene042077:CDS |
| ACTCTATATCATAATAATTC+TGG | 0.336966 | 8.3:+482875 | None:intergenic |
| TGATAAAGACAGAACTAATA+AGG | 0.345533 | 8.3:-482966 | MS.gene042077:CDS |
| TCCTCAGTCCACCAATCCTT+TGG | 0.347878 | 8.3:+483291 | None:intergenic |
| TTATTAAGCTTCGTGATTCC+CGG | 0.358494 | 8.3:+483150 | None:intergenic |
| CTTTGTAGGAGGCCACATTT+TGG | 0.382068 | 8.3:+483826 | None:intergenic |
| TTGCTATGATTCTAGTGATT+CGG | 0.393279 | 8.3:-483800 | MS.gene042077:CDS |
| TGTTCAGTGTAGAAAGTATC+TGG | 0.401715 | 8.3:+484107 | None:intergenic |
| ATTCATGCATTCTTGAAAGT+TGG | 0.405825 | 8.3:-483582 | MS.gene042077:CDS |
| TTGAGATCAATCAGAAATGT+AGG | 0.406103 | 8.3:-482775 | MS.gene042077:CDS |
| AGCCAAAGCAAACAATCTTT+AGG | 0.407220 | 8.3:-481701 | MS.gene042077:CDS |
| GGCAATTGACATCTATCTTA+AGG | 0.413017 | 8.3:-482629 | MS.gene042077:intron |
| TCTAGCAACCACTTGAAGAT+AGG | 0.417159 | 8.3:+482738 | None:intergenic |
| AATCATAGCAAAGCCTTTGT+AGG | 0.422450 | 8.3:+483812 | None:intergenic |
| CAAAATGTGGCCTCCTACAA+AGG | 0.422682 | 8.3:-483825 | MS.gene042077:CDS |
| TTATCTGCCTTACTCAGATC+AGG | 0.424226 | 8.3:+481932 | None:intergenic |
| CATCGTTGATTTGTATTACA+AGG | 0.427373 | 8.3:+483969 | None:intergenic |
| AAAATGAAGTTCATGAAACT+TGG | 0.432812 | 8.3:-484137 | MS.gene042077:CDS |
| TGAACAGGAGAAAGGGTCTA+TGG | 0.435017 | 8.3:-481798 | MS.gene042077:CDS |
| CTCTACTTTGAACAGGAGAA+AGG | 0.436340 | 8.3:-481806 | MS.gene042077:CDS |
| GCAGCTTCTCTACTTTGAAC+AGG | 0.439971 | 8.3:-481813 | MS.gene042077:CDS |
| AATTCTCACACCCTCGCAAC+AGG | 0.451795 | 8.3:-483461 | MS.gene042077:intron |
| TAGCTGTTATCCACAGCACC+AGG | 0.458542 | 8.3:+482802 | None:intergenic |
| GACAGAGGGTCTGTTTCAGT+TGG | 0.461892 | 8.3:-483039 | MS.gene042077:CDS |
| GAGAGCAAGCTTACAGTTTG+AGG | 0.464638 | 8.3:-482944 | MS.gene042077:CDS |
| CCTCAGTCCACCAATCCTTT+GGG | 0.464853 | 8.3:+483292 | None:intergenic |
| GTAATGTAGCAGTAGTTTGA+AGG | 0.478481 | 8.3:+483542 | None:intergenic |
| TGCAAATTTAGCATTAGACT+TGG | 0.484426 | 8.3:-481594 | MS.gene042077:CDS |
| GTCATTCATTCTAAGGAACT+TGG | 0.484520 | 8.3:+483651 | None:intergenic |
| AGGGTGAGAGGAGTCAAAGA+TGG | 0.486259 | 8.3:-481521 | MS.gene042077:CDS |
| AGAGTTAGTTCTAGCAGTGT+TGG | 0.487244 | 8.3:-482857 | MS.gene042077:CDS |
| TTGAAGAGACAGAGTCAGAA+AGG | 0.488396 | 8.3:-481541 | MS.gene042077:CDS |
| CCAGAGTGGTCTGAGAATCT+TGG | 0.488838 | 8.3:-483520 | MS.gene042077:CDS |
| ATGATTCTGTGCAGGTGAAA+TGG | 0.489710 | 8.3:-483365 | MS.gene042077:intron |
| TTTGCCCTTCTTCCAAAATG+TGG | 0.496108 | 8.3:-483838 | MS.gene042077:CDS |
| TATGCATGCCGGTGGTTACC+GGG | 0.501159 | 8.3:-483168 | MS.gene042077:CDS |
| ACCATTCTGTCCCAAAGGAT+TGG | 0.504137 | 8.3:-483302 | MS.gene042077:CDS |
| ACGAAGCTTAATAAAAGCTC+AGG | 0.506205 | 8.3:-483141 | MS.gene042077:CDS |
| AATTCTTGAAAGTAGAGAAA+AGG | 0.506277 | 8.3:-481642 | MS.gene042077:CDS |
| GTAGTTTGAAGGGTTGCAAT+GGG | 0.507662 | 8.3:+483553 | None:intergenic |
| ACCAATCCTTTGGGACAGAA+TGG | 0.517753 | 8.3:+483301 | None:intergenic |
| TCTACTTTGAACAGGAGAAA+GGG | 0.518033 | 8.3:-481805 | MS.gene042077:CDS |
| TGTGTAACCGGGTCTGGTGT+AGG | 0.520651 | 8.3:+483335 | None:intergenic |
| GAAACAGACCCTCTGTCTGC+AGG | 0.525704 | 8.3:+483045 | None:intergenic |
| TTCTGTCTTTATCACTGATG+AGG | 0.527594 | 8.3:+482975 | None:intergenic |
| TCACCACAGACATAAAAGAT+TGG | 0.529296 | 8.3:-481618 | MS.gene042077:CDS |
| TCAAAAGCATCTTCCCCTCC+AGG | 0.529984 | 8.3:+483748 | None:intergenic |
| AATGAATGACTCTATTGAGA+AGG | 0.532339 | 8.3:-483638 | MS.gene042077:CDS |
| ATGAATGACTCTATTGAGAA+GGG | 0.537138 | 8.3:-483637 | MS.gene042077:CDS |
| TGGTCTACTCTTGCAATGCT+CGG | 0.537710 | 8.3:+482667 | None:intergenic |
| TGAAGAGACAGAGTCAGAAA+GGG | 0.541907 | 8.3:-481540 | MS.gene042077:CDS |
| AAATGAAGTTCATGAAACTT+GGG | 0.546861 | 8.3:-484136 | MS.gene042077:CDS |
| ATTCTGTCCCAAAGGATTGG+TGG | 0.547591 | 8.3:-483299 | MS.gene042077:CDS |
| GGTGCATCCTGATCTGAGTA+AGG | 0.550735 | 8.3:-481939 | MS.gene042077:CDS |
| ATGCATTCTTGAAAGTTGGA+AGG | 0.551432 | 8.3:-483578 | MS.gene042077:CDS |
| TTGTTTCTGACCTGTTGCGA+GGG | 0.556069 | 8.3:+483451 | None:intergenic |
| AGTAGTTTGAAGGGTTGCAA+TGG | 0.564457 | 8.3:+483552 | None:intergenic |
| TCTACTTTCAAGAATTTGAG+TGG | 0.566408 | 8.3:+481649 | None:intergenic |
| ATTTGTATTACAAGGTCTGA+GGG | 0.567132 | 8.3:+483977 | None:intergenic |
| TCGTGATTCCCGGTAACCAC+CGG | 0.567730 | 8.3:+483160 | None:intergenic |
| GATTTGTATTACAAGGTCTG+AGG | 0.574070 | 8.3:+483976 | None:intergenic |
| ATAATAATTCTGGTCTGAAG+AGG | 0.580103 | 8.3:+482885 | None:intergenic |
| TCCTTCACCTACACCAGACC+CGG | 0.580358 | 8.3:-483342 | MS.gene042077:CDS |
| AAGAATGTCCCCTGGTGCTG+TGG | 0.580374 | 8.3:-482812 | MS.gene042077:CDS |
| GCTTCACCAATAAGCTGTGG+TGG | 0.583607 | 8.3:+483201 | None:intergenic |
| ACAGAGTCAGAAAGGGTGAG+AGG | 0.589004 | 8.3:-481533 | MS.gene042077:CDS |
| ACCGGGTCTGGTGTAGGTGA+AGG | 0.590318 | 8.3:+483341 | None:intergenic |
| TAATGTAGCAGTAGTTTGAA+GGG | 0.590928 | 8.3:+483543 | None:intergenic |
| CATAGCAAAGCCTTTGTAGG+AGG | 0.594452 | 8.3:+483815 | None:intergenic |
| GCTTCATGATATACCTGGAG+GGG | 0.598800 | 8.3:-483761 | MS.gene042077:CDS |
| CCAAGATTCTCAGACCACTC+TGG | 0.602252 | 8.3:+483520 | None:intergenic |
| AGCAAGCTTACAGTTTGAGG+AGG | 0.602564 | 8.3:-482941 | MS.gene042077:CDS |
| GTGGAGCTTCATGATATACC+TGG | 0.604285 | 8.3:-483766 | MS.gene042077:CDS |
| AAGTAGTTCGAGCTACAAGT+TGG | 0.604998 | 8.3:-481498 | MS.gene042077:CDS |
| TCTACACTGAACAAGCTACC+AGG | 0.607293 | 8.3:-484097 | MS.gene042077:intron |
| CATAGACTCCTATCTTCAAG+TGG | 0.609809 | 8.3:-482746 | MS.gene042077:CDS |
| TTTGTTTCTGACCTGTTGCG+AGG | 0.609870 | 8.3:+483450 | None:intergenic |
| AGCTTCATGATATACCTGGA+GGG | 0.613646 | 8.3:-483762 | MS.gene042077:CDS |
| CAGATAAGAAGAGACTGTGT+GGG | 0.617913 | 8.3:-481916 | MS.gene042077:CDS |
| CTTTGGAAAAGAATGTCCCC+TGG | 0.619063 | 8.3:-482820 | MS.gene042077:CDS |
| CTTTGCATGTCTATGCATGC+CGG | 0.619328 | 8.3:-483179 | MS.gene042077:CDS |
| GCATGATTCCTGCAGACAGA+GGG | 0.630954 | 8.3:-483053 | MS.gene042077:CDS |
| ACAGCACCATTCTGTCCCAA+AGG | 0.631036 | 8.3:-483307 | MS.gene042077:CDS |
| AGACCACAACGATCTATACA+AGG | 0.631528 | 8.3:-482650 | MS.gene042077:CDS |
| TTGCCTTGTATAGATCGTTG+TGG | 0.649985 | 8.3:+482647 | None:intergenic |
| TGCATGTCTATGCATGCCGG+TGG | 0.650418 | 8.3:-483176 | MS.gene042077:CDS |
| AGTTCATGAAACTTGGGACA+AGG | 0.654108 | 8.3:-484130 | MS.gene042077:CDS |
| GCAGATAAGAAGAGACTGTG+TGG | 0.654770 | 8.3:-481917 | MS.gene042077:CDS |
| AGCATGATTCCTGCAGACAG+AGG | 0.655585 | 8.3:-483054 | MS.gene042077:CDS |
| GCTGTTATCCACAGCACCAG+GGG | 0.656030 | 8.3:+482804 | None:intergenic |
| AGCTGTTATCCACAGCACCA+GGG | 0.676561 | 8.3:+482803 | None:intergenic |
| GAGCTTCATGATATACCTGG+AGG | 0.685850 | 8.3:-483763 | MS.gene042077:CDS |
| CCCAAAGGATTGGTGGACTG+AGG | 0.687423 | 8.3:-483292 | MS.gene042077:CDS |
| AAAGCTTCACCAATAAGCTG+TGG | 0.694004 | 8.3:+483198 | None:intergenic |
| TGTTACTTATCTGCTACACA+AGG | 0.712317 | 8.3:-483948 | MS.gene042077:intron |
| CTACTGCTACATTACCAGAG+TGG | 0.738581 | 8.3:-483534 | MS.gene042077:CDS |
| AAACTGACACCAGAAGTACG+TGG | 0.774606 | 8.3:-481878 | MS.gene042077:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAATTTAAAGTAAATAAA+GGG | + | chr8.3:483024-483043 | None:intergenic | 10.0% |
| !!! | TTGTAATTTAAAGTAAATAA+AGG | + | chr8.3:483025-483044 | None:intergenic | 10.0% |
| !!! | GTAATTTAAAGTAAATAAAG+GGG | + | chr8.3:483023-483042 | None:intergenic | 15.0% |
| !!! | TAAGATATTTCTATAACAAA+AGG | + | chr8.3:483477-483496 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTAAATAAAGG+GGG | + | chr8.3:483022-483041 | None:intergenic | 15.0% |
| !! | AAACAACATGAAATAATTCT+AGG | - | chr8.3:483797-483816 | MS.gene042077:CDS | 20.0% |
| !! | ACTCTATATCATAATAATTC+TGG | + | chr8.3:482677-482696 | None:intergenic | 20.0% |
| !! | ATCCTAAAAAAATCATAAGA+AGG | - | chr8.3:484083-484102 | MS.gene042077:intron | 20.0% |
| !! | TAACATATCAACCTATAATT+TGG | - | chr8.3:483208-483227 | MS.gene042077:CDS | 20.0% |
| !! | TCCTAAAAAAATCATAAGAA+GGG | - | chr8.3:484084-484103 | MS.gene042077:intron | 20.0% |
| !!! | AGCTATTTTCATAAGTTATT+CGG | + | chr8.3:483420-483439 | None:intergenic | 20.0% |
| ! | AAGGAAAAATCATAAAAGGT+AGG | + | chr8.3:482960-482979 | None:intergenic | 25.0% |
| ! | AAGTGGAAAACTTTGATTAT+TGG | - | chr8.3:483556-483575 | MS.gene042077:CDS | 25.0% |
| ! | AATGAAACTAAACACTTGTT+TGG | - | chr8.3:483273-483292 | MS.gene042077:CDS | 25.0% |
| ! | AATTCTTGAAAGTAGAGAAA+AGG | - | chr8.3:483907-483926 | MS.gene042077:intron | 25.0% |
| ! | AGGAAAAATCATAAAAGGTA+GGG | + | chr8.3:482959-482978 | None:intergenic | 25.0% |
| ! | GAAAAAAAGATAGCAATAAG+AGG | - | chr8.3:483977-483996 | MS.gene042077:CDS | 25.0% |
| ! | GTTGAAGGAAAAATCATAAA+AGG | + | chr8.3:482964-482983 | None:intergenic | 25.0% |
| ! | TCTATATTATTAGAGTCTCA+AGG | + | chr8.3:483177-483196 | None:intergenic | 25.0% |
| ! | TGATAAAGACAGAACTAATA+AGG | - | chr8.3:482583-482602 | MS.gene042077:intron | 25.0% |
| ! | TTAAAGTTGAATGCATAAAC+AGG | - | chr8.3:483589-483608 | MS.gene042077:CDS | 25.0% |
| !! | ACAAGTGTTTAGTTTCATTT+AGG | + | chr8.3:483272-483291 | None:intergenic | 25.0% |
| !! | CAAGTGTTTAGTTTCATTTA+GGG | + | chr8.3:483271-483290 | None:intergenic | 25.0% |
| !!! | AATACATGTTAGTTTGTGAA+AGG | + | chr8.3:481520-481539 | None:intergenic | 25.0% |
| !!! | GCTATTTTCATAAGTTATTC+GGG | + | chr8.3:483419-483438 | None:intergenic | 25.0% |
| !!! | TTTGGTTTGCTAAAAAACAT+GGG | + | chr8.3:483244-483263 | None:intergenic | 25.0% |
| AATGAATGACTCTATTGAGA+AGG | - | chr8.3:481911-481930 | MS.gene042077:CDS | 30.0% | |
| AATTGACATCTATCTTAAGG+TGG | - | chr8.3:482923-482942 | MS.gene042077:CDS | 30.0% | |
| ACATGTATTCTCATAAATGC+AGG | - | chr8.3:481531-481550 | MS.gene042077:CDS | 30.0% | |
| AGACTATTCGAGAAAACTTA+CGG | - | chr8.3:483337-483356 | MS.gene042077:CDS | 30.0% | |
| ATAATAATTCTGGTCTGAAG+AGG | + | chr8.3:482667-482686 | None:intergenic | 30.0% | |
| ATCAGAACATAGCATGAAAA+AGG | - | chr8.3:484117-484136 | MS.gene042077:CDS | 30.0% | |
| ATGAATGACTCTATTGAGAA+GGG | - | chr8.3:481912-481931 | MS.gene042077:CDS | 30.0% | |
| ATTCATGCATTCTTGAAAGT+TGG | - | chr8.3:481967-481986 | MS.gene042077:intron | 30.0% | |
| ATTTGTATTACAAGGTCTGA+GGG | + | chr8.3:481575-481594 | None:intergenic | 30.0% | |
| CAATAGAGTCATTCATTCTA+AGG | + | chr8.3:481908-481927 | None:intergenic | 30.0% | |
| TAATGTAGCAGTAGTTTGAA+GGG | + | chr8.3:482009-482028 | None:intergenic | 30.0% | |
| TATAAATGATGATTCTGTGC+AGG | - | chr8.3:482176-482195 | MS.gene042077:intron | 30.0% | |
| TCTACTTTCAAGAATTTGAG+TGG | + | chr8.3:483903-483922 | None:intergenic | 30.0% | |
| TGCAAATTTAGCATTAGACT+TGG | - | chr8.3:483955-483974 | MS.gene042077:CDS | 30.0% | |
| TTGAGATCAATCAGAAATGT+AGG | - | chr8.3:482774-482793 | MS.gene042077:CDS | 30.0% | |
| TTGCTATGATTCTAGTGATT+CGG | - | chr8.3:481749-481768 | MS.gene042077:CDS | 30.0% | |
| ! | ATCTTGACATAGATCTTTTC+AGG | - | chr8.3:482289-482308 | MS.gene042077:intron | 30.0% |
| !! | AGGATTTTGAAGGATAAAGA+AGG | + | chr8.3:482647-482666 | None:intergenic | 30.0% |
| !! | CATCGTTGATTTGTATTACA+AGG | + | chr8.3:481583-481602 | None:intergenic | 30.0% |
| !! | GTTTGGTTTGCTAAAAAACA+TGG | + | chr8.3:483245-483264 | None:intergenic | 30.0% |
| !! | TCTTTAGGACAAGAGTTTAA+TGG | - | chr8.3:483863-483882 | MS.gene042077:intron | 30.0% |
| !!! | GCCCTTCTTATGATTTTTTT+AGG | + | chr8.3:484088-484107 | None:intergenic | 30.0% |
| !!! | TCTTTTCAGGTGCATAATAA+TGG | - | chr8.3:482302-482321 | MS.gene042077:intron | 30.0% |
| AATCAGGATAGGCAATTAAG+TGG | - | chr8.3:483539-483558 | MS.gene042077:CDS | 35.0% | |
| AATCATAGCAAAGCCTTTGT+AGG | + | chr8.3:481740-481759 | None:intergenic | 35.0% | |
| ACGAAGCTTAATAAAAGCTC+AGG | - | chr8.3:482408-482427 | MS.gene042077:intron | 35.0% | |
| AGCCAAAGCAAACAATCTTT+AGG | - | chr8.3:483848-483867 | MS.gene042077:intron | 35.0% | |
| ATGCATTCTTGAAAGTTGGA+AGG | - | chr8.3:481971-481990 | MS.gene042077:intron | 35.0% | |
| ATTGAGAAGGGAAACTTTGT+AGG | - | chr8.3:481924-481943 | MS.gene042077:CDS | 35.0% | |
| GATTTGTATTACAAGGTCTG+AGG | + | chr8.3:481576-481595 | None:intergenic | 35.0% | |
| GGCAATTGACATCTATCTTA+AGG | - | chr8.3:482920-482939 | MS.gene042077:CDS | 35.0% | |
| GTAATGTAGCAGTAGTTTGA+AGG | + | chr8.3:482010-482029 | None:intergenic | 35.0% | |
| GTCCTAAAGATTGTTTGCTT+TGG | + | chr8.3:483853-483872 | None:intergenic | 35.0% | |
| TCACCACAGACATAAAAGAT+TGG | - | chr8.3:483931-483950 | MS.gene042077:intron | 35.0% | |
| TCTACTTTGAACAGGAGAAA+GGG | - | chr8.3:483744-483763 | MS.gene042077:CDS | 35.0% | |
| TGGAAACTTTCTTGAAGCTT+TGG | - | chr8.3:482712-482731 | MS.gene042077:CDS | 35.0% | |
| TTAAGGACTTAGAACTCAAG+TGG | - | chr8.3:481626-481645 | MS.gene042077:CDS | 35.0% | |
| TTAATTGCCTATCCTGATTC+TGG | + | chr8.3:483538-483557 | None:intergenic | 35.0% | |
| TTATTAAGCTTCGTGATTCC+CGG | + | chr8.3:482402-482421 | None:intergenic | 35.0% | |
| TTCTGTCTTTATCACTGATG+AGG | + | chr8.3:482577-482596 | None:intergenic | 35.0% | |
| TTTGCTAAAAAACATGGGAC+TGG | + | chr8.3:483239-483258 | None:intergenic | 35.0% | |
| ! | AGTTTCATTTAGGGTGTGTT+TGG | + | chr8.3:483262-483281 | None:intergenic | 35.0% |
| ! | ATCTGCTACACAAGGTATTA+AGG | - | chr8.3:481609-481628 | MS.gene042077:CDS | 35.0% |
| ! | CATCCAATCTTTTATGTCTG+TGG | + | chr8.3:483937-483956 | None:intergenic | 35.0% |
| ! | GTCATTCATTCTAAGGAACT+TGG | + | chr8.3:481901-481920 | None:intergenic | 35.0% |
| ! | TGTTACTTATCTGCTACACA+AGG | - | chr8.3:481601-481620 | MS.gene042077:CDS | 35.0% |
| !! | TGTTCAGTGTAGAAAGTATC+TGG | + | chr8.3:481445-481464 | None:intergenic | 35.0% |
| !!! | CTCTGTGCTAAGTTTTGTTA+TGG | - | chr8.3:481825-481844 | MS.gene042077:CDS | 35.0% |
| !!! | GTGCTGTTTTTTTGTGTAAC+CGG | + | chr8.3:482229-482248 | None:intergenic | 35.0% |
| !!! | TGCTGTTTTTTTGTGTAACC+GGG | + | chr8.3:482228-482247 | None:intergenic | 35.0% |
| !!! | TTGTTTTAGCAGTTTGTGAC+TGG | + | chr8.3:483783-483802 | None:intergenic | 35.0% |
| AAAGCTTCACCAATAAGCTG+TGG | + | chr8.3:482354-482373 | None:intergenic | 40.0% | |
| AACAACACCAGAATCAGGAT+AGG | - | chr8.3:483528-483547 | MS.gene042077:CDS | 40.0% | |
| AAGTAGTTCGAGCTACAAGT+TGG | - | chr8.3:484051-484070 | MS.gene042077:intron | 40.0% | |
| AAGTTATTCGGGAGAGCTTA+TGG | + | chr8.3:483408-483427 | None:intergenic | 40.0% | |
| ACCAATCTGACTCTAGTTGA+AGG | + | chr8.3:482979-482998 | None:intergenic | 40.0% | |
| AGACCACAACGATCTATACA+AGG | - | chr8.3:482899-482918 | MS.gene042077:CDS | 40.0% | |
| AGCTGCACTACAGTTCTTAA+TGG | + | chr8.3:483722-483741 | None:intergenic | 40.0% | |
| AGCTTCATGATATACCTGGA+GGG | - | chr8.3:481787-481806 | MS.gene042077:CDS | 40.0% | |
| AGTAGTTTGAAGGGTTGCAA+TGG | + | chr8.3:482000-482019 | None:intergenic | 40.0% | |
| AGTTCATGAAACTTGGGACA+AGG | - | chr8.3:481419-481438 | MS.gene042077:CDS | 40.0% | |
| ATAGTCTCTTGCTTGAATGC+TGG | - | chr8.3:483129-483148 | MS.gene042077:CDS | 40.0% | |
| ATCAGAACAACACCAGAATC+AGG | - | chr8.3:483523-483542 | MS.gene042077:CDS | 40.0% | |
| ATGATTCTGTGCAGGTGAAA+TGG | - | chr8.3:482184-482203 | MS.gene042077:intron | 40.0% | |
| CAGATAAGAAGAGACTGTGT+GGG | - | chr8.3:483633-483652 | MS.gene042077:CDS | 40.0% | |
| CATAGACTCCTATCTTCAAG+TGG | - | chr8.3:482803-482822 | MS.gene042077:CDS | 40.0% | |
| CTACGCAAATCTTTGACAAC+AGG | + | chr8.3:483073-483092 | None:intergenic | 40.0% | |
| CTCTACTTTGAACAGGAGAA+AGG | - | chr8.3:483743-483762 | MS.gene042077:CDS | 40.0% | |
| CTGTTGTCAAAGATTTGCGT+AGG | - | chr8.3:483071-483090 | MS.gene042077:CDS | 40.0% | |
| GTAGTTTGAAGGGTTGCAAT+GGG | + | chr8.3:481999-482018 | None:intergenic | 40.0% | |
| TAAAAAACATGGGACTGGAC+TGG | + | chr8.3:483234-483253 | None:intergenic | 40.0% | |
| TCCTTCAACTAGAGTCAGAT+TGG | - | chr8.3:482975-482994 | MS.gene042077:CDS | 40.0% | |
| TCTAGCAACCACTTGAAGAT+AGG | + | chr8.3:482814-482833 | None:intergenic | 40.0% | |
| TGAAGAGACAGAGTCAGAAA+GGG | - | chr8.3:484009-484028 | MS.gene042077:intron | 40.0% | |
| TTATCTGCCTTACTCAGATC+AGG | + | chr8.3:483620-483639 | None:intergenic | 40.0% | |
| TTGAAGAGACAGAGTCAGAA+AGG | - | chr8.3:484008-484027 | MS.gene042077:intron | 40.0% | |
| TTGCCTTGTATAGATCGTTG+TGG | + | chr8.3:482905-482924 | None:intergenic | 40.0% | |
| TTTGCCCTTCTTCCAAAATG+TGG | - | chr8.3:481711-481730 | MS.gene042077:CDS | 40.0% | |
| ! | TGGTCTGAAGAGGATTTTGA+AGG | + | chr8.3:482657-482676 | None:intergenic | 40.0% |
| !! | AGAGTTAGTTCTAGCAGTGT+TGG | - | chr8.3:482692-482711 | MS.gene042077:CDS | 40.0% |
| !! | GTACTTCTGGTGTCAGTTTT+TGG | + | chr8.3:483670-483689 | None:intergenic | 40.0% |
| !! | TGATTCGGAGAGTTTTACTG+TGG | - | chr8.3:481764-481783 | MS.gene042077:CDS | 40.0% |
| !!! | TTTTTTTGTGTAACCGGGTC+TGG | + | chr8.3:482223-482242 | None:intergenic | 40.0% |
| ACCATTCTGTCCCAAAGGAT+TGG | - | chr8.3:482247-482266 | MS.gene042077:intron | 45.0% | |
| AGCAAGCTTACAGTTTGAGG+AGG | - | chr8.3:482608-482627 | MS.gene042077:intron | 45.0% | |
| ATTCTGTCCCAAAGGATTGG+TGG | - | chr8.3:482250-482269 | MS.gene042077:intron | 45.0% | |
| CAAAATGTGGCCTCCTACAA+AGG | - | chr8.3:481724-481743 | MS.gene042077:CDS | 45.0% | |
| CATAGCAAAGCCTTTGTAGG+AGG | + | chr8.3:481737-481756 | None:intergenic | 45.0% | |
| CTACTGCTACATTACCAGAG+TGG | - | chr8.3:482015-482034 | MS.gene042077:intron | 45.0% | |
| CTTTGCATGTCTATGCATGC+CGG | - | chr8.3:482370-482389 | MS.gene042077:intron | 45.0% | |
| GAGAGCAAGCTTACAGTTTG+AGG | - | chr8.3:482605-482624 | MS.gene042077:intron | 45.0% | |
| GAGCTTCATGATATACCTGG+AGG | - | chr8.3:481786-481805 | MS.gene042077:CDS | 45.0% | |
| GCAGATAAGAAGAGACTGTG+TGG | - | chr8.3:483632-483651 | MS.gene042077:CDS | 45.0% | |
| GCAGCTTCTCTACTTTGAAC+AGG | - | chr8.3:483736-483755 | MS.gene042077:CDS | 45.0% | |
| GCTTCATGATATACCTGGAG+GGG | - | chr8.3:481788-481807 | MS.gene042077:CDS | 45.0% | |
| GTGGAGCTTCATGATATACC+TGG | - | chr8.3:481783-481802 | MS.gene042077:CDS | 45.0% | |
| TCTACACTGAACAAGCTACC+AGG | - | chr8.3:481452-481471 | MS.gene042077:CDS | 45.0% | |
| TGAACAGGAGAAAGGGTCTA+TGG | - | chr8.3:483751-483770 | MS.gene042077:CDS | 45.0% | |
| TGGTCTACTCTTGCAATGCT+CGG | + | chr8.3:482885-482904 | None:intergenic | 45.0% | |
| ! | AAACTGACACCAGAAGTACG+TGG | - | chr8.3:483671-483690 | MS.gene042077:CDS | 45.0% |
| ! | CTTTGGAAAAGAATGTCCCC+TGG | - | chr8.3:482729-482748 | MS.gene042077:CDS | 45.0% |
| ! | CTTTGTAGGAGGCCACATTT+TGG | + | chr8.3:481726-481745 | None:intergenic | 45.0% |
| !! | ACCAATCCTTTGGGACAGAA+TGG | + | chr8.3:482251-482270 | None:intergenic | 45.0% |
| !! | GACTGGACTGGCCAAATTAT+AGG | + | chr8.3:483222-483241 | None:intergenic | 45.0% |
| !! | GAGGCCACATTTTGGAAGAA+GGG | + | chr8.3:481718-481737 | None:intergenic | 45.0% |
| !! | TGGCAGAAGCTCGTTTTTGA+CGG | + | chr8.3:483702-483721 | None:intergenic | 45.0% |
| !! | TTGTTTCTGACCTGTTGCGA+GGG | + | chr8.3:482101-482120 | None:intergenic | 45.0% |
| !! | TTTGTTTCTGACCTGTTGCG+AGG | + | chr8.3:482102-482121 | None:intergenic | 45.0% |
| !!! | AAACTAAAATAAAAATATTT+TGG | + | chr8.3:481659-481678 | None:intergenic | 5.0% |
| AATTCTCACACCCTCGCAAC+AGG | - | chr8.3:482088-482107 | MS.gene042077:intron | 50.0% | |
| ACAGAGTCAGAAAGGGTGAG+AGG | - | chr8.3:484016-484035 | MS.gene042077:intron | 50.0% | |
| ACAGCACCATTCTGTCCCAA+AGG | - | chr8.3:482242-482261 | MS.gene042077:intron | 50.0% | |
| AGCATGATTCCTGCAGACAG+AGG | - | chr8.3:482495-482514 | MS.gene042077:intron | 50.0% | |
| AGCTGTTATCCACAGCACCA+GGG | + | chr8.3:482749-482768 | None:intergenic | 50.0% | |
| AGGGTGAGAGGAGTCAAAGA+TGG | - | chr8.3:484028-484047 | MS.gene042077:intron | 50.0% | |
| CCAAGATTCTCAGACCACTC+TGG | + | chr8.3:482032-482051 | None:intergenic | 50.0% | |
| CCAGAGTGGTCTGAGAATCT+TGG | - | chr8.3:482029-482048 | MS.gene042077:intron | 50.0% | |
| CCTCAGTCCACCAATCCTTT+GGG | + | chr8.3:482260-482279 | None:intergenic | 50.0% | |
| GACAGAGGGTCTGTTTCAGT+TGG | - | chr8.3:482510-482529 | MS.gene042077:intron | 50.0% | |
| GCATGATTCCTGCAGACAGA+GGG | - | chr8.3:482496-482515 | MS.gene042077:intron | 50.0% | |
| GCTTCACCAATAAGCTGTGG+TGG | + | chr8.3:482351-482370 | None:intergenic | 50.0% | |
| GGTGCATCCTGATCTGAGTA+AGG | - | chr8.3:483610-483629 | MS.gene042077:CDS | 50.0% | |
| GTGCTTCCACCACAGCTTAT+TGG | - | chr8.3:482342-482361 | MS.gene042077:intron | 50.0% | |
| TAGCTGTTATCCACAGCACC+AGG | + | chr8.3:482750-482769 | None:intergenic | 50.0% | |
| TCCTCAGTCCACCAATCCTT+TGG | + | chr8.3:482261-482280 | None:intergenic | 50.0% | |
| ! | TAAGCGCTGCTGTGAATACC+TGG | + | chr8.3:481473-481492 | None:intergenic | 50.0% |
| !! | GAAGCTCGTTTTTGACGGCA+TGG | + | chr8.3:483697-483716 | None:intergenic | 50.0% |
| !! | GGAGGCCACATTTTGGAAGA+AGG | + | chr8.3:481719-481738 | None:intergenic | 50.0% |
| !! | TCAAAAGCATCTTCCCCTCC+AGG | + | chr8.3:481804-481823 | None:intergenic | 50.0% |
| CTATGCATGCCGGTGGTTAC+CGG | - | chr8.3:482380-482399 | MS.gene042077:intron | 55.0% | |
| GAAACAGACCCTCTGTCTGC+AGG | + | chr8.3:482507-482526 | None:intergenic | 55.0% | |
| GCTGTTATCCACAGCACCAG+GGG | + | chr8.3:482748-482767 | None:intergenic | 55.0% | |
| TATGCATGCCGGTGGTTACC+GGG | - | chr8.3:482381-482400 | MS.gene042077:intron | 55.0% | |
| TCCTTCACCTACACCAGACC+CGG | - | chr8.3:482207-482226 | MS.gene042077:intron | 55.0% | |
| TCGTGATTCCCGGTAACCAC+CGG | + | chr8.3:482392-482411 | None:intergenic | 55.0% | |
| TGCATGTCTATGCATGCCGG+TGG | - | chr8.3:482373-482392 | MS.gene042077:intron | 55.0% | |
| TGTGTAACCGGGTCTGGTGT+AGG | + | chr8.3:482217-482236 | None:intergenic | 55.0% | |
| ! | AAGAATGTCCCCTGGTGCTG+TGG | - | chr8.3:482737-482756 | MS.gene042077:CDS | 55.0% |
| !! | CCCAAAGGATTGGTGGACTG+AGG | - | chr8.3:482257-482276 | MS.gene042077:intron | 55.0% |
| ACCGGGTCTGGTGTAGGTGA+AGG | + | chr8.3:482211-482230 | None:intergenic | 60.0% | |
| ACGGCATGGCCACGTACTTC+TGG | + | chr8.3:483683-483702 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 481415 | 484156 | 481415 | ID=MS.gene042077 |
| chr8.3 | mRNA | 481415 | 484156 | 481415 | ID=MS.gene042077.t1;Parent=MS.gene042077 |
| chr8.3 | exon | 484098 | 484156 | 484098 | ID=MS.gene042077.t1.exon1;Parent=MS.gene042077.t1 |
| chr8.3 | CDS | 484098 | 484156 | 484098 | ID=cds.MS.gene042077.t1;Parent=MS.gene042077.t1 |
| chr8.3 | exon | 483949 | 484018 | 483949 | ID=MS.gene042077.t1.exon2;Parent=MS.gene042077.t1 |
| chr8.3 | CDS | 483949 | 484018 | 483949 | ID=cds.MS.gene042077.t1;Parent=MS.gene042077.t1 |
| chr8.3 | exon | 483462 | 483860 | 483462 | ID=MS.gene042077.t1.exon3;Parent=MS.gene042077.t1 |
| chr8.3 | CDS | 483462 | 483860 | 483462 | ID=cds.MS.gene042077.t1;Parent=MS.gene042077.t1 |
| chr8.3 | exon | 482630 | 483373 | 482630 | ID=MS.gene042077.t1.exon4;Parent=MS.gene042077.t1 |
| chr8.3 | CDS | 482630 | 483373 | 482630 | ID=cds.MS.gene042077.t1;Parent=MS.gene042077.t1 |
| chr8.3 | exon | 481415 | 481960 | 481415 | ID=MS.gene042077.t1.exon5;Parent=MS.gene042077.t1 |
| chr8.3 | CDS | 481415 | 481960 | 481415 | ID=cds.MS.gene042077.t1;Parent=MS.gene042077.t1 |
| Gene Sequence |
| Protein sequence |
