Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043067.t1 | AES87683.2 | 94.2 | 240 | 14 | 0 | 1 | 240 | 199 | 438 | 3.00E-126 | 462.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043067.t1 | F4HT21 | 52.3 | 235 | 111 | 1 | 322 | 556 | 16 | 249 | 3.8e-61 | 237.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043067.t1 | G7JN46 | 94.2 | 240 | 14 | 0 | 1 | 240 | 199 | 438 | 2.1e-126 | 462.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043067 | MS.gene56256 | PPI |
| MS.gene043067 | MS.gene009458 | PPI |
| MS.gene043067 | MS.gene63514 | PPI |
| MS.gene043067 | MS.gene51627 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043067.t1 | MTR_4g032220 | 99.088 | 329 | 3 | 0 | 320 | 648 | 19 | 347 | 0.0 | 659 |
| MS.gene043067.t1 | MTR_4g032240 | 84.548 | 343 | 50 | 2 | 308 | 648 | 7 | 348 | 0.0 | 561 |
| MS.gene043067.t1 | MTR_4g032300 | 72.222 | 324 | 89 | 1 | 326 | 648 | 17 | 340 | 8.22e-168 | 483 |
| MS.gene043067.t1 | MTR_4g032190 | 94.167 | 240 | 14 | 0 | 1 | 240 | 199 | 438 | 1.87e-167 | 486 |
| MS.gene043067.t1 | MTR_4g032350 | 72.930 | 314 | 85 | 0 | 327 | 640 | 21 | 334 | 8.54e-162 | 469 |
| MS.gene043067.t1 | MTR_4g032330 | 67.164 | 67 | 22 | 0 | 582 | 648 | 17 | 83 | 2.15e-19 | 83.6 |
| MS.gene043067.t1 | MTR_4g032200 | 97.143 | 35 | 1 | 0 | 272 | 306 | 27 | 61 | 5.43e-14 | 68.9 |
| MS.gene043067.t1 | MTR_2g026800 | 94.118 | 34 | 2 | 0 | 580 | 613 | 63 | 96 | 7.80e-12 | 62.8 |
| MS.gene043067.t1 | MTR_0098s0160 | 93.750 | 32 | 2 | 0 | 582 | 613 | 47 | 78 | 9.69e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043067.t1 | AT1G33970 | 58.696 | 322 | 132 | 1 | 326 | 647 | 20 | 340 | 9.34e-120 | 360 |
| MS.gene043067.t1 | AT1G33970 | 58.696 | 322 | 132 | 1 | 326 | 647 | 20 | 340 | 9.34e-120 | 360 |
| MS.gene043067.t1 | AT1G33970 | 58.696 | 322 | 132 | 1 | 326 | 647 | 20 | 340 | 9.34e-120 | 360 |
| MS.gene043067.t1 | AT1G33970 | 58.696 | 322 | 132 | 1 | 326 | 647 | 20 | 340 | 9.34e-120 | 360 |
| MS.gene043067.t1 | AT1G33970 | 60.311 | 257 | 101 | 1 | 326 | 582 | 20 | 275 | 1.11e-97 | 301 |
| MS.gene043067.t1 | AT1G33950 | 50.000 | 274 | 136 | 1 | 326 | 599 | 12 | 284 | 5.61e-89 | 280 |
| MS.gene043067.t1 | AT1G33960 | 51.903 | 289 | 133 | 3 | 332 | 615 | 44 | 331 | 1.27e-87 | 278 |
| MS.gene043067.t1 | AT1G33960 | 51.903 | 289 | 133 | 3 | 332 | 615 | 68 | 355 | 3.88e-87 | 277 |
| MS.gene043067.t1 | AT1G33900 | 44.268 | 314 | 160 | 4 | 305 | 618 | 1 | 299 | 4.92e-86 | 272 |
| MS.gene043067.t1 | AT4G09940 | 45.192 | 312 | 165 | 6 | 317 | 625 | 34 | 342 | 3.52e-85 | 273 |
| MS.gene043067.t1 | AT4G09940 | 45.192 | 312 | 165 | 6 | 317 | 625 | 77 | 385 | 1.73e-84 | 272 |
| MS.gene043067.t1 | AT1G33950 | 49.635 | 274 | 131 | 3 | 326 | 599 | 12 | 278 | 2.92e-83 | 265 |
| MS.gene043067.t1 | AT1G33930 | 48.582 | 282 | 138 | 2 | 316 | 597 | 27 | 301 | 2.34e-82 | 263 |
| MS.gene043067.t1 | AT4G09950 | 45.820 | 323 | 166 | 7 | 331 | 648 | 18 | 336 | 7.36e-82 | 262 |
| MS.gene043067.t1 | AT2G26820 | 45.161 | 310 | 162 | 3 | 331 | 637 | 6 | 310 | 7.41e-78 | 252 |
| MS.gene043067.t1 | AT2G26820 | 45.161 | 310 | 162 | 3 | 331 | 637 | 6 | 310 | 1.55e-77 | 252 |
| MS.gene043067.t1 | AT2G26820 | 45.161 | 310 | 162 | 3 | 331 | 637 | 6 | 310 | 2.49e-76 | 252 |
| MS.gene043067.t1 | AT2G26820 | 47.143 | 280 | 141 | 2 | 331 | 608 | 6 | 280 | 6.30e-76 | 250 |
| MS.gene043067.t1 | AT1G33890 | 44.565 | 276 | 151 | 2 | 324 | 598 | 6 | 280 | 3.70e-74 | 241 |
| MS.gene043067.t1 | AT1G33890 | 44.565 | 276 | 151 | 2 | 324 | 598 | 6 | 280 | 3.70e-74 | 241 |
| MS.gene043067.t1 | AT1G33910 | 46.975 | 281 | 130 | 6 | 324 | 597 | 6 | 274 | 1.62e-72 | 236 |
| MS.gene043067.t1 | AT4G09930 | 41.141 | 333 | 183 | 6 | 318 | 648 | 14 | 335 | 6.05e-70 | 231 |
| MS.gene043067.t1 | AT1G33830 | 50.718 | 209 | 103 | 0 | 333 | 541 | 11 | 219 | 4.56e-67 | 219 |
| MS.gene043067.t1 | AT1G33870 | 44.177 | 249 | 137 | 1 | 355 | 603 | 1 | 247 | 4.35e-66 | 218 |
| MS.gene043067.t1 | AT4G09950 | 42.435 | 271 | 147 | 7 | 383 | 648 | 7 | 273 | 5.37e-55 | 189 |
| MS.gene043067.t1 | AT1G33880 | 41.546 | 207 | 115 | 2 | 330 | 536 | 23 | 223 | 7.97e-53 | 181 |
| MS.gene043067.t1 | AT1G33880 | 41.546 | 207 | 115 | 2 | 330 | 536 | 23 | 223 | 7.97e-53 | 181 |
| MS.gene043067.t1 | AT5G42670 | 37.611 | 226 | 96 | 4 | 1 | 226 | 98 | 278 | 7.44e-36 | 137 |
| MS.gene043067.t1 | AT5G52070 | 48.361 | 122 | 60 | 3 | 1 | 121 | 22 | 141 | 1.03e-29 | 117 |
| MS.gene043067.t1 | AT5G52070 | 48.361 | 122 | 60 | 3 | 1 | 121 | 25 | 144 | 1.51e-29 | 117 |
| MS.gene043067.t1 | AT5G52070 | 48.361 | 122 | 60 | 3 | 1 | 121 | 25 | 144 | 1.51e-29 | 117 |
| MS.gene043067.t1 | AT5G52070 | 48.361 | 122 | 60 | 3 | 1 | 121 | 25 | 144 | 1.51e-29 | 117 |
| MS.gene043067.t1 | AT5G52070 | 48.361 | 122 | 60 | 3 | 1 | 121 | 74 | 193 | 5.41e-29 | 117 |
| MS.gene043067.t1 | AT5G52070 | 48.361 | 122 | 60 | 3 | 1 | 121 | 74 | 193 | 5.41e-29 | 117 |
Find 147 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAGCTTGCAGACATTATT+TGG | 0.116982 | 4.2:-73265907 | MS.gene043067:CDS |
| TCTGCTGGATCTGAGTTTAT+TGG | 0.235468 | 4.2:-73266036 | MS.gene043067:CDS |
| TATTTCAAGCTCACATATTA+TGG | 0.236755 | 4.2:-73276747 | MS.gene043067:CDS |
| CAAGGACCTGCGCCCTTCTT+TGG | 0.263417 | 4.2:-73279725 | MS.gene043067:CDS |
| GATACACTTGACGATTATTT+AGG | 0.266607 | 4.2:-73265820 | MS.gene043067:CDS |
| CTGCTGGATCTGAGTTTATT+GGG | 0.278196 | 4.2:-73266035 | MS.gene043067:CDS |
| CTGATAGCTCTTTCATCATT+TGG | 0.281937 | 4.2:-73274875 | MS.gene043067:CDS |
| TACAATGGAATCAGCAATTC+TGG | 0.286651 | 4.2:-73276606 | MS.gene043067:CDS |
| CGAATGGAAGGTTGGAGATT+TGG | 0.288552 | 4.2:-73282042 | MS.gene043067:CDS |
| GCAAATAACGCATCTGTATA+AGG | 0.295127 | 4.2:+73264935 | None:intergenic |
| TGAAGCTCGGACAGTGGTTT+TGG | 0.303565 | 4.2:-73267005 | MS.gene043067:CDS |
| TAATAGTATTCTTGGGAAAA+AGG | 0.341397 | 4.2:-73266948 | MS.gene043067:CDS |
| CTCTTCGTTGGTGTCTTCAA+TGG | 0.346696 | 4.2:+73270021 | None:intergenic |
| CACACAGTCCAACCTTTCTC+TGG | 0.352617 | 4.2:+73279694 | None:intergenic |
| ATTTGGAAATGATAAAGTTC+AGG | 0.352956 | 4.2:-73281970 | MS.gene043067:intron |
| AAGTGTGAGGTGCCTTTATC+AGG | 0.355820 | 4.2:-73276536 | MS.gene043067:intron |
| CTCCGCAAGCGAGGTGATAA+GGG | 0.358423 | 4.2:-73262970 | MS.gene043067:CDS |
| GGGCGTTTGGCACCTGATAA+AGG | 0.369471 | 4.2:+73276524 | None:intergenic |
| GGAAAAGTGACTGAAGTATT+TGG | 0.372820 | 4.2:-73281987 | MS.gene043067:CDS |
| GCAACCGGTAATAGTATTCT+TGG | 0.374174 | 4.2:-73266956 | MS.gene043067:CDS |
| TTTCCCAAGAATACTATTAC+CGG | 0.377468 | 4.2:+73266952 | None:intergenic |
| CAACTCTGTTGCAAACAGTA+TGG | 0.380281 | 4.2:-73276807 | MS.gene043067:CDS |
| ACAAAGAAAGGTTGATTCCT+TGG | 0.386870 | 4.2:-73264790 | MS.gene043067:CDS |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.398135 | 4.2:-73263136 | MS.gene043067:intron |
| TCTCAAGATACTTATTGTAT+TGG | 0.401477 | 4.2:-73271183 | MS.gene043067:CDS |
| GGTTGCACTCTTCCCATTGC+CGG | 0.411306 | 4.2:+73266973 | None:intergenic |
| ACTCCGCAAGCGAGGTGATA+AGG | 0.415841 | 4.2:-73262971 | MS.gene043067:CDS |
| AAGATACTTATTGTATTGGT+TGG | 0.425773 | 4.2:-73271179 | MS.gene043067:intron |
| AGGTTGGAGATTTGGTAGAT+TGG | 0.426397 | 4.2:-73282034 | MS.gene043067:CDS |
| ACCTGCGCCCTTCTTTGGAC+TGG | 0.433874 | 4.2:-73279720 | MS.gene043067:CDS |
| ATAATGAATCCAGCAAGTTC+AGG | 0.435565 | 4.2:-73277890 | MS.gene043067:intron |
| TTGCAAAATTTGCAGGAAGA+AGG | 0.438561 | 4.2:-73277932 | MS.gene043067:intron |
| TTGCTTCTCATCTTCTTAGC+AGG | 0.438736 | 4.2:+73276662 | None:intergenic |
| GGATTATTTGAAGTTTCTGC+TGG | 0.441692 | 4.2:-73266051 | MS.gene043067:CDS |
| AGCAGAAGACAGTGCAAAGT+TGG | 0.445685 | 4.2:-73263058 | MS.gene043067:CDS |
| AAGTCGAGGGCTAGCTCGTC+CGG | 0.446348 | 4.2:-73266920 | MS.gene043067:CDS |
| CATGTTTCAAGTGGTTCTGC+TGG | 0.446858 | 4.2:-73271206 | MS.gene043067:CDS |
| CTATATGATTGTGGTCTTCA+CGG | 0.447172 | 4.2:-73265869 | MS.gene043067:CDS |
| TTGGTTGGACGTACCGGCAA+TGG | 0.448150 | 4.2:-73266986 | MS.gene043067:CDS |
| TTGAAGCTCTATCTCTTCGT+TGG | 0.449200 | 4.2:+73270009 | None:intergenic |
| GGAATCAGCAATTCTGGACT+TGG | 0.460492 | 4.2:-73276600 | MS.gene043067:CDS |
| ACGAAGGATGGCCACTATAG+AGG | 0.464218 | 4.2:+73274898 | None:intergenic |
| CAAAGAAGGGCGCAGGTCCT+TGG | 0.465031 | 4.2:+73279726 | None:intergenic |
| GCATATGCAGCAAACATATG+AGG | 0.468304 | 4.2:-73264730 | MS.gene043067:CDS |
| TGCGTTATTTGCAGAACTAA+AGG | 0.480208 | 4.2:-73264924 | MS.gene043067:intron |
| TCTGGGCTCCAGTCCAAAGA+AGG | 0.490355 | 4.2:+73279712 | None:intergenic |
| GGCAATGGGAAGAGTGCAAC+CGG | 0.490727 | 4.2:-73266971 | MS.gene043067:CDS |
| CAACCGGTAATAGTATTCTT+GGG | 0.491758 | 4.2:-73266955 | MS.gene043067:CDS |
| CTACCACCTCCGCTAGGTGA+AGG | 0.491762 | 4.2:-73279769 | MS.gene043067:CDS |
| GGAATCCGATGTGTTGTTGT+CGG | 0.496224 | 4.2:+73271256 | None:intergenic |
| ATCATTACATCGACTGTTTG+AGG | 0.496897 | 4.2:+73276694 | None:intergenic |
| CCGATGTGTTGTTGTCGGCT+AGG | 0.497755 | 4.2:+73271261 | None:intergenic |
| TACAAGGCTTGAGAAACAAT+TGG | 0.506471 | 4.2:-73263106 | MS.gene043067:CDS |
| TCTCTTTGACAACAAGACTA+AGG | 0.507101 | 4.2:-73265035 | MS.gene043067:CDS |
| TGCATAGACTTTGCCAAGGA+TGG | 0.507813 | 4.2:-73265997 | MS.gene043067:CDS |
| GACCCTTCACCTAGCGGAGG+TGG | 0.508332 | 4.2:+73279766 | None:intergenic |
| AGAAAGGTTGATTCCTTGGA+AGG | 0.509028 | 4.2:-73264786 | MS.gene043067:CDS |
| TATATGATTGTGGTCTTCAC+GGG | 0.509376 | 4.2:-73265868 | MS.gene043067:CDS |
| TGGTTGGACGTACCGGCAAT+GGG | 0.511384 | 4.2:-73266985 | MS.gene043067:CDS |
| TTGGACTGGAGCCCAGAGAA+AGG | 0.515083 | 4.2:-73279706 | MS.gene043067:CDS |
| AAGGACGAAAAGAAGCGATC+TGG | 0.516709 | 4.2:-73265016 | MS.gene043067:CDS |
| TCCAGTCCAAAGAAGGGCGC+AGG | 0.520174 | 4.2:+73279719 | None:intergenic |
| GTCAATGTTATTGACACTCC+AGG | 0.521632 | 4.2:-73266845 | MS.gene043067:intron |
| TCCTTCTGAATATCCTTCCA+AGG | 0.521923 | 4.2:+73264773 | None:intergenic |
| GACAGATAACACCACAAGAA+TGG | 0.522190 | 4.2:+73265966 | None:intergenic |
| TAGATTGTGATTGTCCATGT+TGG | 0.526586 | 4.2:-73274925 | MS.gene043067:CDS |
| ATGTTGGACCACCTCTATAG+TGG | 0.529159 | 4.2:-73274909 | MS.gene043067:CDS |
| TGCAAACAGTATGGATATTG+AGG | 0.531735 | 4.2:-73276798 | MS.gene043067:CDS |
| TGAATGTCCAGAGTCTTTGA+AGG | 0.532393 | 4.2:-73265794 | MS.gene043067:intron |
| TTCCATTGTATTCGAAGACA+TGG | 0.537313 | 4.2:+73276619 | None:intergenic |
| GCTGGATTCATTATCCGAGC+AGG | 0.538397 | 4.2:+73277899 | None:intergenic |
| GCGTTGCTCTCTCCTCTCCA+CGG | 0.540042 | 4.2:+73276829 | None:intergenic |
| TCAAAGACTCTGGACATTCA+CGG | 0.540421 | 4.2:+73265797 | None:intergenic |
| GAGGAGGCTGGCAGTAAAAG+TGG | 0.541052 | 4.2:-73276779 | MS.gene043067:CDS |
| AATGGCATGGATACCATCCT+TGG | 0.542900 | 4.2:+73265984 | None:intergenic |
| TGATAGTATCACAGAATGGC+GGG | 0.545440 | 4.2:-73264961 | MS.gene043067:CDS |
| TCTGATGGTTGCTATTGGTG+TGG | 0.546729 | 4.2:-73282008 | MS.gene043067:CDS |
| TCTACGTGAAGATGAATTGT+TGG | 0.548517 | 4.2:-73274852 | MS.gene043067:CDS |
| ACTGGAGCCCAGAGAAAGGT+TGG | 0.549135 | 4.2:-73279702 | MS.gene043067:CDS |
| GATTGTGGTCTTCACGGGAG+GGG | 0.549312 | 4.2:-73265863 | MS.gene043067:CDS |
| TCACTTTCACGATAGATGGT+AGG | 0.553522 | 4.2:+73282113 | None:intergenic |
| TTCACGATAGATGGTAGGAA+AGG | 0.556485 | 4.2:+73282118 | None:intergenic |
| TAGCAAATCCTCTCTTTGTG+TGG | 0.559170 | 4.2:-73265070 | MS.gene043067:CDS |
| AGCAAATCCTCTCTTTGTGT+GGG | 0.561083 | 4.2:-73265069 | MS.gene043067:CDS |
| ATTTGCAGGAAGAAGGATGC+AGG | 0.565446 | 4.2:-73277925 | MS.gene043067:intron |
| TCACGATAGATGGTAGGAAA+GGG | 0.565643 | 4.2:+73282119 | None:intergenic |
| GTTGATGACGAATGGAAGGT+TGG | 0.565728 | 4.2:-73282050 | MS.gene043067:CDS |
| TAGTTATTGTTGATGACGAA+TGG | 0.567724 | 4.2:-73282058 | MS.gene043067:CDS |
| TACCACCTCCGCTAGGTGAA+GGG | 0.571753 | 4.2:-73279768 | MS.gene043067:CDS |
| AAGAGCTATCAGACGAAGGA+TGG | 0.572267 | 4.2:+73274886 | None:intergenic |
| AATAACTATCACTTCTGAGA+AGG | 0.572635 | 4.2:+73282073 | None:intergenic |
| TGATTGTGGTCTTCACGGGA+GGG | 0.573707 | 4.2:-73265864 | MS.gene043067:CDS |
| AGCTAATGAAGCTCGGACAG+TGG | 0.575504 | 4.2:-73267011 | MS.gene043067:CDS |
| GCTAAAACATATTACTGAGA+TGG | 0.577150 | 4.2:-73264703 | MS.gene043067:intron |
| CTTGCTACTAGATCATAGAA+TGG | 0.577281 | 4.2:+73262939 | None:intergenic |
| AGATTTCAGCTAATGAAGCT+CGG | 0.577288 | 4.2:-73267018 | MS.gene043067:CDS |
| AGCAGTCTGCATTTCACAAG+AGG | 0.579383 | 4.2:+73266889 | None:intergenic |
| ACACAGTCCAACCTTTCTCT+GGG | 0.579554 | 4.2:+73279695 | None:intergenic |
| ACTATAGAGGTGGTCCAACA+TGG | 0.579789 | 4.2:+73274911 | None:intergenic |
| ACGATGAAATACGAAAACTA+AGG | 0.582337 | 4.2:-73263020 | MS.gene043067:CDS |
| AAGGATGCAGGTGTCCTGCT+CGG | 0.582503 | 4.2:-73277913 | MS.gene043067:CDS |
| TGGAATTCAGACAAAGGCTA+AGG | 0.584533 | 4.2:+73276639 | None:intergenic |
| CATGAAGAACTCCGCAAGCG+AGG | 0.587165 | 4.2:-73262979 | MS.gene043067:CDS |
| ACTGCATAGAGAACAAAGAA+AGG | 0.590070 | 4.2:-73264802 | MS.gene043067:CDS |
| TCCTTGGAAGGATATTCAGA+AGG | 0.590769 | 4.2:-73264774 | MS.gene043067:CDS |
| GAAGATGAATTGTTGGCGGA+AGG | 0.590979 | 4.2:-73274845 | MS.gene043067:CDS |
| AACGATTCCCACACAAAGAG+AGG | 0.592811 | 4.2:+73265062 | None:intergenic |
| TTCCATGTCTTCGAATACAA+TGG | 0.593562 | 4.2:-73276621 | MS.gene043067:CDS |
| ACAGATGGATCAGTGAGCAT+TGG | 0.594650 | 4.2:-73276869 | MS.gene043067:intron |
| CTGGGCTCCAGTCCAAAGAA+GGG | 0.597405 | 4.2:+73279713 | None:intergenic |
| ACGTGAAGATGAATTGTTGG+CGG | 0.597432 | 4.2:-73274849 | MS.gene043067:CDS |
| ATGATTGTGGTCTTCACGGG+AGG | 0.597619 | 4.2:-73265865 | MS.gene043067:CDS |
| GATTGTTGACTATATGATTG+TGG | 0.602009 | 4.2:-73265878 | MS.gene043067:CDS |
| TATTGTTGATGACGAATGGA+AGG | 0.603504 | 4.2:-73282054 | MS.gene043067:CDS |
| TTGGACTGTGTGTGTACCTA+CGG | 0.604601 | 4.2:-73279683 | MS.gene043067:intron |
| GATTTGCTACCACCTCCGCT+AGG | 0.605782 | 4.2:-73279775 | MS.gene043067:CDS |
| ATCGTATGAAGCTTTAACCA+AGG | 0.606477 | 4.2:-73279743 | MS.gene043067:CDS |
| AGTATGGATATTGAGGAGGC+TGG | 0.608407 | 4.2:-73276791 | MS.gene043067:CDS |
| AGTTGAAGGAGGCAACTACA+AGG | 0.610652 | 4.2:-73263122 | MS.gene043067:CDS |
| AACATGATAGTATCACAGAA+TGG | 0.613239 | 4.2:-73264965 | MS.gene043067:CDS |
| TCCGCAAGCGAGGTGATAAG+GGG | 0.625525 | 4.2:-73262969 | MS.gene043067:CDS |
| TGGTATCCATGCCATTCTTG+TGG | 0.626101 | 4.2:-73265977 | MS.gene043067:CDS |
| ACTAAGGAAGCATCTTGAGA+AGG | 0.630580 | 4.2:-73263004 | MS.gene043067:CDS |
| CGATAGATGGTAGGAAAGGG+AGG | 0.634082 | 4.2:+73282122 | None:intergenic |
| ATCGTCTGGATCAGCTAGCG+AGG | 0.635161 | 4.2:-73267044 | MS.gene043067:intron |
| CAGACTGCTGAGTTGAGTGA+TGG | 0.635531 | 4.2:-73266875 | MS.gene043067:CDS |
| TTCACAAGAGGAAGTGACAC+CGG | 0.638052 | 4.2:+73266901 | None:intergenic |
| ATAACACCACAAGAATGGCA+TGG | 0.647650 | 4.2:+73265971 | None:intergenic |
| GTGAGTGCACATGTTTCAAG+TGG | 0.650329 | 4.2:-73271215 | MS.gene043067:CDS |
| ATGAAAGAGCTATCAGACGA+AGG | 0.651701 | 4.2:+73274882 | None:intergenic |
| TACGATGACCCTTCACCTAG+CGG | 0.652144 | 4.2:+73279760 | None:intergenic |
| GATTGAGTCAAAGTTGAAGG+AGG | 0.654673 | 4.2:-73263133 | MS.gene043067:CDS |
| ATGATAGTATCACAGAATGG+CGG | 0.664615 | 4.2:-73264962 | MS.gene043067:CDS |
| AAGGATGGCCACTATAGAGG+TGG | 0.665335 | 4.2:+73274901 | None:intergenic |
| AAGACATGGAATTCAGACAA+AGG | 0.670613 | 4.2:+73276633 | None:intergenic |
| CCGCAAGCGAGGTGATAAGG+GGG | 0.671834 | 4.2:-73262968 | MS.gene043067:CDS |
| TGTCAGATCACGATTTAGCG+AGG | 0.673590 | 4.2:-73265947 | MS.gene043067:CDS |
| CTTCATACAGAACCGTGGAG+AGG | 0.674602 | 4.2:-73276841 | MS.gene043067:CDS |
| CAAGTGCATAGACTTTGCCA+AGG | 0.679540 | 4.2:-73266001 | MS.gene043067:CDS |
| AAACAGTATGGATATTGAGG+AGG | 0.683309 | 4.2:-73276795 | MS.gene043067:CDS |
| CGCAAGCGAGGTGATAAGGG+GGG | 0.685418 | 4.2:-73262967 | MS.gene043067:CDS |
| GAGGCTGGCAGTAAAAGTGG+AGG | 0.688773 | 4.2:-73276776 | MS.gene043067:CDS |
| GAAGAGATAGAGCTTCAACA+AGG | 0.701764 | 4.2:-73270004 | MS.gene043067:intron |
| AAGAGCTGTGTTGAAGTGTG+AGG | 0.706586 | 4.2:-73276549 | MS.gene043067:CDS |
| GATGACCCTTCACCTAGCGG+AGG | 0.713753 | 4.2:+73279763 | None:intergenic |
| CCTAGCCGACAACAACACAT+CGG | 0.715474 | 4.2:-73271261 | MS.gene043067:CDS |
| TCAGTCTTCATACAGAACCG+TGG | 0.722004 | 4.2:-73276846 | MS.gene043067:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 73262951 | 73282153 | 73262951 | ID=MS.gene043067 |
| chr4.2 | mRNA | 73262951 | 73282153 | 73262951 | ID=MS.gene043067.t1;Parent=MS.gene043067 |
| chr4.2 | exon | 73281971 | 73282153 | 73281971 | ID=MS.gene043067.t1.exon1;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73281971 | 73282153 | 73281971 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73279684 | 73279800 | 73279684 | ID=MS.gene043067.t1.exon2;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73279684 | 73279800 | 73279684 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73277891 | 73277939 | 73277891 | ID=MS.gene043067.t1.exon3;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73277891 | 73277939 | 73277891 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73276537 | 73276887 | 73276537 | ID=MS.gene043067.t1.exon4;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73276537 | 73276887 | 73276537 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73274834 | 73274944 | 73274834 | ID=MS.gene043067.t1.exon5;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73274834 | 73274944 | 73274834 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73271180 | 73271284 | 73271180 | ID=MS.gene043067.t1.exon6;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73271180 | 73271284 | 73271180 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73270005 | 73270046 | 73270005 | ID=MS.gene043067.t1.exon7;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73270005 | 73270046 | 73270005 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73266846 | 73267052 | 73266846 | ID=MS.gene043067.t1.exon8;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73266846 | 73267052 | 73266846 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73265795 | 73266072 | 73265795 | ID=MS.gene043067.t1.exon9;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73265795 | 73266072 | 73265795 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73264925 | 73265089 | 73264925 | ID=MS.gene043067.t1.exon10;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73264925 | 73265089 | 73264925 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73264704 | 73264838 | 73264704 | ID=MS.gene043067.t1.exon11;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73264704 | 73264838 | 73264704 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| chr4.2 | exon | 73262951 | 73263154 | 73262951 | ID=MS.gene043067.t1.exon12;Parent=MS.gene043067.t1 |
| chr4.2 | CDS | 73262951 | 73263154 | 73262951 | ID=cds.MS.gene043067.t1;Parent=MS.gene043067.t1 |
| Gene Sequence |
| Protein sequence |