Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044078.t1 | XP_003589133.1 | 97.7 | 469 | 11 | 0 | 1 | 469 | 6 | 474 | 4.20E-239 | 837 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044078.t1 | P43297 | 69.1 | 460 | 132 | 4 | 8 | 464 | 8 | 460 | 2.5e-163 | 576.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044078.t1 | Q2HTQ3 | 97.7 | 469 | 11 | 0 | 1 | 469 | 6 | 474 | 3.0e-239 | 837.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene044078 | MS.gene96250 | PPI |
MS.gene044078 | MS.gene004403 | PPI |
MS.gene42423 | MS.gene044078 | PPI |
MS.gene044078 | MS.gene42300 | PPI |
MS.gene044078 | MS.gene014473 | PPI |
MS.gene044078 | MS.gene05839 | PPI |
MS.gene044078 | MS.gene69449 | PPI |
MS.gene064708 | MS.gene044078 | PPI |
MS.gene044078 | MS.gene69606 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044078.t1 | MTR_1g018840 | 97.655 | 469 | 11 | 0 | 1 | 469 | 6 | 474 | 0.0 | 959 |
MS.gene044078.t1 | MTR_1g018840 | 97.489 | 438 | 11 | 0 | 1 | 438 | 6 | 443 | 0.0 | 892 |
MS.gene044078.t1 | MTR_3g102220 | 72.473 | 465 | 125 | 2 | 7 | 469 | 11 | 474 | 0.0 | 690 |
MS.gene044078.t1 | MTR_1g107550 | 67.972 | 434 | 132 | 3 | 22 | 454 | 26 | 453 | 0.0 | 598 |
MS.gene044078.t1 | MTR_4g094918 | 64.543 | 361 | 114 | 1 | 3 | 363 | 2 | 348 | 8.78e-177 | 499 |
MS.gene044078.t1 | MTR_3g112430 | 51.020 | 392 | 181 | 6 | 49 | 438 | 35 | 417 | 6.90e-132 | 389 |
MS.gene044078.t1 | MTR_3g116080 | 52.632 | 342 | 150 | 4 | 16 | 357 | 19 | 348 | 6.85e-127 | 372 |
MS.gene044078.t1 | MTR_3g075390 | 51.261 | 357 | 164 | 7 | 11 | 365 | 6 | 354 | 5.76e-123 | 363 |
MS.gene044078.t1 | MTR_4g104370 | 50.138 | 363 | 171 | 7 | 13 | 373 | 6 | 360 | 4.10e-118 | 350 |
MS.gene044078.t1 | MTR_2g016180 | 44.787 | 422 | 208 | 8 | 42 | 448 | 43 | 454 | 5.67e-117 | 352 |
MS.gene044078.t1 | MTR_2g016270 | 44.286 | 420 | 198 | 8 | 42 | 448 | 43 | 439 | 1.25e-114 | 345 |
MS.gene044078.t1 | MTR_4g079470 | 51.227 | 326 | 142 | 7 | 37 | 355 | 28 | 343 | 1.65e-112 | 335 |
MS.gene044078.t1 | MTR_4g079770 | 53.035 | 313 | 130 | 7 | 50 | 355 | 41 | 343 | 5.33e-112 | 334 |
MS.gene044078.t1 | MTR_5g022560 | 48.864 | 352 | 151 | 8 | 16 | 355 | 8 | 342 | 8.05e-112 | 334 |
MS.gene044078.t1 | MTR_4g079800 | 52.396 | 313 | 132 | 7 | 50 | 355 | 41 | 343 | 1.52e-110 | 330 |
MS.gene044078.t1 | MTR_4g047610 | 50.462 | 325 | 145 | 6 | 38 | 355 | 26 | 341 | 4.91e-110 | 329 |
MS.gene044078.t1 | MTR_2g075830 | 48.980 | 343 | 153 | 7 | 19 | 355 | 13 | 339 | 1.51e-109 | 328 |
MS.gene044078.t1 | MTR_4g080730 | 52.597 | 308 | 135 | 6 | 50 | 355 | 40 | 338 | 4.27e-108 | 324 |
MS.gene044078.t1 | MTR_4g079440 | 45.845 | 349 | 178 | 6 | 10 | 356 | 5 | 344 | 7.98e-107 | 321 |
MS.gene044078.t1 | MTR_4g080700 | 51.948 | 308 | 137 | 6 | 50 | 355 | 40 | 338 | 8.97e-107 | 321 |
MS.gene044078.t1 | MTR_4g107930 | 50.467 | 321 | 140 | 8 | 45 | 355 | 32 | 343 | 4.72e-106 | 319 |
MS.gene044078.t1 | MTR_2g090890 | 46.023 | 352 | 167 | 7 | 14 | 358 | 3 | 338 | 1.50e-105 | 317 |
MS.gene044078.t1 | MTR_4g080360 | 48.220 | 309 | 154 | 5 | 50 | 356 | 37 | 341 | 6.81e-100 | 303 |
MS.gene044078.t1 | MTR_2g083930 | 45.342 | 322 | 172 | 4 | 38 | 356 | 23 | 343 | 1.47e-97 | 297 |
MS.gene044078.t1 | MTR_7g078600 | 46.326 | 313 | 149 | 10 | 50 | 358 | 42 | 339 | 6.86e-86 | 267 |
MS.gene044078.t1 | MTR_7g079230 | 43.077 | 325 | 166 | 8 | 37 | 355 | 23 | 334 | 1.20e-84 | 264 |
MS.gene044078.t1 | MTR_2g015850 | 47.797 | 295 | 145 | 7 | 64 | 356 | 76 | 363 | 1.45e-80 | 254 |
MS.gene044078.t1 | MTR_4g065077 | 40.599 | 367 | 184 | 14 | 5 | 357 | 11 | 357 | 2.72e-75 | 241 |
MS.gene044078.t1 | MTR_2g015920 | 36.957 | 368 | 208 | 12 | 9 | 362 | 8 | 365 | 7.40e-70 | 227 |
MS.gene044078.t1 | MTR_2g015930 | 38.674 | 362 | 196 | 13 | 11 | 357 | 9 | 359 | 1.23e-68 | 223 |
MS.gene044078.t1 | MTR_4g125300 | 37.778 | 360 | 193 | 11 | 11 | 356 | 6 | 348 | 1.33e-66 | 218 |
MS.gene044078.t1 | MTR_2g067900 | 42.902 | 317 | 165 | 11 | 50 | 356 | 16 | 326 | 2.76e-66 | 216 |
MS.gene044078.t1 | MTR_8g086470 | 37.466 | 363 | 185 | 13 | 5 | 357 | 27 | 357 | 2.27e-65 | 215 |
MS.gene044078.t1 | MTR_1g023210 | 41.611 | 298 | 148 | 8 | 56 | 336 | 57 | 345 | 4.49e-63 | 209 |
MS.gene044078.t1 | MTR_4g071060 | 38.701 | 354 | 169 | 12 | 13 | 336 | 6 | 341 | 3.78e-62 | 206 |
MS.gene044078.t1 | MTR_2g067560 | 39.255 | 349 | 186 | 15 | 48 | 380 | 14 | 352 | 1.30e-54 | 196 |
MS.gene044078.t1 | MTR_2g064475 | 37.101 | 345 | 169 | 14 | 48 | 354 | 14 | 348 | 4.13e-54 | 185 |
MS.gene044078.t1 | MTR_1g094135 | 33.693 | 371 | 202 | 10 | 4 | 348 | 6 | 358 | 4.15e-54 | 186 |
MS.gene044078.t1 | MTR_1g023810 | 45.249 | 221 | 111 | 7 | 138 | 354 | 47 | 261 | 4.70e-52 | 177 |
MS.gene044078.t1 | MTR_2g066980 | 32.861 | 353 | 183 | 12 | 19 | 355 | 3 | 317 | 1.29e-50 | 175 |
MS.gene044078.t1 | MTR_7g078630 | 38.686 | 274 | 122 | 7 | 50 | 311 | 706 | 945 | 2.15e-47 | 176 |
MS.gene044078.t1 | MTR_4g072790 | 35.714 | 294 | 146 | 8 | 50 | 336 | 48 | 305 | 9.53e-46 | 162 |
MS.gene044078.t1 | MTR_2g016380 | 40.553 | 217 | 117 | 4 | 240 | 446 | 18 | 232 | 2.45e-45 | 159 |
MS.gene044078.t1 | MTR_4g072340 | 32.353 | 340 | 181 | 9 | 7 | 336 | 9 | 309 | 4.70e-44 | 157 |
MS.gene044078.t1 | MTR_4g073660 | 34.459 | 296 | 151 | 7 | 50 | 336 | 47 | 308 | 1.49e-43 | 156 |
MS.gene044078.t1 | MTR_1g025450 | 43.103 | 174 | 77 | 5 | 138 | 308 | 53 | 207 | 9.99e-33 | 130 |
MS.gene044078.t1 | MTR_7g078580 | 50.476 | 105 | 49 | 3 | 258 | 361 | 4 | 106 | 6.34e-29 | 110 |
MS.gene044078.t1 | MTR_2g015840 | 39.695 | 131 | 75 | 2 | 46 | 175 | 29 | 156 | 4.86e-27 | 110 |
MS.gene044078.t1 | MTR_2g015840 | 44.954 | 109 | 57 | 3 | 248 | 355 | 164 | 270 | 1.48e-24 | 103 |
MS.gene044078.t1 | MTR_7g079130 | 50.538 | 93 | 44 | 2 | 265 | 356 | 6 | 97 | 9.77e-25 | 98.2 |
MS.gene044078.t1 | MTR_3g029560 | 33.962 | 212 | 111 | 8 | 151 | 356 | 49 | 237 | 2.54e-21 | 93.2 |
MS.gene044078.t1 | MTR_7g078310 | 47.917 | 96 | 47 | 2 | 140 | 232 | 152 | 247 | 1.23e-20 | 91.7 |
MS.gene044078.t1 | MTR_7g111060 | 27.758 | 281 | 158 | 12 | 97 | 348 | 66 | 330 | 7.34e-20 | 91.3 |
MS.gene044078.t1 | MTR_2g047960 | 48.101 | 79 | 41 | 0 | 149 | 227 | 7 | 85 | 1.84e-18 | 80.9 |
MS.gene044078.t1 | MTR_7g111050 | 26.715 | 277 | 166 | 11 | 97 | 348 | 63 | 327 | 5.19e-17 | 82.8 |
MS.gene044078.t1 | MTR_8g087510 | 33.588 | 131 | 79 | 7 | 181 | 308 | 23 | 148 | 4.32e-12 | 65.1 |
MS.gene044078.t1 | MTR_1g009480 | 28.431 | 102 | 65 | 1 | 5 | 106 | 1 | 94 | 3.43e-11 | 61.6 |
MS.gene044078.t1 | MTR_7g079260 | 42.466 | 73 | 24 | 2 | 282 | 353 | 7 | 62 | 7.22e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044078.t1 | AT1G47128 | 71.957 | 460 | 119 | 4 | 8 | 464 | 8 | 460 | 0.0 | 657 |
MS.gene044078.t1 | AT5G43060 | 71.648 | 455 | 118 | 5 | 9 | 459 | 9 | 456 | 0.0 | 640 |
MS.gene044078.t1 | AT3G19390 | 59.465 | 449 | 161 | 8 | 9 | 454 | 8 | 438 | 0.0 | 531 |
MS.gene044078.t1 | AT4G36880 | 61.585 | 328 | 120 | 2 | 41 | 362 | 40 | 367 | 1.23e-149 | 431 |
MS.gene044078.t1 | AT1G09850 | 52.068 | 411 | 174 | 6 | 45 | 449 | 27 | 420 | 1.07e-144 | 421 |
MS.gene044078.t1 | AT3G19400 | 59.133 | 323 | 122 | 6 | 40 | 358 | 34 | 350 | 1.53e-136 | 397 |
MS.gene044078.t1 | AT4G23520 | 55.028 | 358 | 142 | 8 | 5 | 358 | 9 | 351 | 3.13e-135 | 394 |
MS.gene044078.t1 | AT4G11310 | 51.524 | 361 | 165 | 6 | 1 | 358 | 1 | 354 | 7.22e-127 | 373 |
MS.gene044078.t1 | AT4G11320 | 51.801 | 361 | 164 | 6 | 3 | 358 | 6 | 361 | 1.45e-125 | 370 |
MS.gene044078.t1 | AT4G11320 | 51.801 | 361 | 164 | 6 | 3 | 358 | 6 | 361 | 1.45e-125 | 370 |
MS.gene044078.t1 | AT3G48340 | 51.831 | 355 | 164 | 5 | 12 | 365 | 4 | 352 | 4.44e-124 | 366 |
MS.gene044078.t1 | AT1G20850 | 55.660 | 318 | 135 | 3 | 41 | 357 | 42 | 354 | 1.96e-122 | 361 |
MS.gene044078.t1 | AT4G35350 | 50.000 | 352 | 165 | 3 | 7 | 358 | 14 | 354 | 8.68e-121 | 357 |
MS.gene044078.t1 | AT5G50260 | 51.381 | 362 | 162 | 7 | 5 | 364 | 1 | 350 | 1.52e-118 | 352 |
MS.gene044078.t1 | AT1G06260 | 47.714 | 350 | 164 | 6 | 11 | 357 | 10 | 343 | 5.35e-109 | 327 |
MS.gene044078.t1 | AT3G48350 | 47.238 | 362 | 174 | 7 | 5 | 362 | 1 | 349 | 3.92e-107 | 322 |
MS.gene044078.t1 | AT5G45890 | 49.511 | 307 | 150 | 4 | 52 | 355 | 40 | 344 | 6.95e-105 | 316 |
MS.gene044078.t1 | AT3G43960 | 51.327 | 339 | 150 | 11 | 37 | 368 | 28 | 358 | 1.00e-102 | 311 |
MS.gene044078.t1 | AT3G19400 | 58.964 | 251 | 94 | 5 | 40 | 286 | 34 | 279 | 5.42e-101 | 304 |
MS.gene044078.t1 | AT2G34080 | 42.033 | 364 | 183 | 9 | 1 | 356 | 1 | 344 | 8.35e-91 | 280 |
MS.gene044078.t1 | AT2G27420 | 42.936 | 361 | 183 | 10 | 5 | 356 | 1 | 347 | 1.77e-90 | 279 |
MS.gene044078.t1 | AT3G49340 | 46.815 | 314 | 152 | 9 | 50 | 356 | 35 | 340 | 4.13e-90 | 278 |
MS.gene044078.t1 | AT4G35350 | 47.535 | 284 | 138 | 3 | 7 | 290 | 14 | 286 | 2.01e-88 | 272 |
MS.gene044078.t1 | AT1G29080 | 41.905 | 315 | 175 | 7 | 46 | 356 | 35 | 345 | 1.80e-81 | 256 |
MS.gene044078.t1 | AT1G29090 | 39.726 | 365 | 180 | 11 | 9 | 356 | 13 | 354 | 1.22e-80 | 254 |
MS.gene044078.t1 | AT3G48350 | 43.403 | 288 | 150 | 5 | 5 | 290 | 1 | 277 | 2.37e-72 | 231 |
MS.gene044078.t1 | AT1G29110 | 35.362 | 345 | 199 | 7 | 19 | 356 | 6 | 333 | 2.14e-69 | 224 |
MS.gene044078.t1 | AT5G60360 | 39.752 | 322 | 168 | 11 | 43 | 356 | 53 | 356 | 3.65e-65 | 214 |
MS.gene044078.t1 | AT3G45310 | 35.733 | 375 | 203 | 12 | 1 | 356 | 1 | 356 | 5.66e-64 | 211 |
MS.gene044078.t1 | AT4G39090 | 40.063 | 317 | 147 | 7 | 45 | 334 | 43 | 343 | 2.17e-63 | 210 |
MS.gene044078.t1 | AT5G60360 | 39.130 | 322 | 169 | 11 | 43 | 356 | 53 | 355 | 7.65e-63 | 208 |
MS.gene044078.t1 | AT5G60360 | 39.432 | 317 | 172 | 11 | 43 | 352 | 53 | 356 | 2.15e-62 | 207 |
MS.gene044078.t1 | AT2G21430 | 35.933 | 359 | 186 | 10 | 1 | 334 | 1 | 340 | 4.96e-62 | 206 |
MS.gene044078.t1 | AT3G45310 | 35.279 | 377 | 201 | 13 | 1 | 356 | 1 | 355 | 1.82e-61 | 204 |
MS.gene044078.t1 | AT4G16190 | 35.574 | 357 | 195 | 11 | 6 | 336 | 3 | 350 | 5.37e-57 | 193 |
MS.gene044078.t1 | AT3G54940 | 33.708 | 356 | 195 | 11 | 6 | 336 | 8 | 347 | 2.14e-51 | 178 |
MS.gene044078.t1 | AT3G54940 | 32.155 | 283 | 162 | 8 | 6 | 272 | 8 | 276 | 8.16e-39 | 142 |
MS.gene044078.t1 | AT4G01610 | 27.491 | 291 | 172 | 12 | 97 | 361 | 66 | 343 | 1.95e-20 | 92.8 |
MS.gene044078.t1 | AT1G02305 | 27.698 | 278 | 162 | 11 | 97 | 348 | 69 | 333 | 6.59e-20 | 91.7 |
MS.gene044078.t1 | AT4G01610 | 26.804 | 291 | 174 | 12 | 97 | 361 | 66 | 343 | 1.25e-18 | 87.8 |
MS.gene044078.t1 | AT1G02300 | 28.095 | 210 | 122 | 8 | 161 | 348 | 148 | 350 | 4.74e-13 | 70.9 |
Find 125 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACCGTAGGATGAAGAAAT+TGG | 0.244550 | 1.2:+4566465 | MS.gene044078:CDS |
TATGTTCATCAATGAATTTA+AGG | 0.255434 | 1.2:-4566345 | None:intergenic |
GGTGGTGATGGTCCAGGGTT+AGG | 0.264790 | 1.2:-4569514 | None:intergenic |
CAGAAAACGGGAAAGATTAT+TGG | 0.266107 | 1.2:+4569353 | MS.gene044078:CDS |
GGGTTCTGTCCATTCTTAAT+TGG | 0.270191 | 1.2:-4569490 | None:intergenic |
TTCCTCCAATCAACAGATTC+AGG | 0.289567 | 1.2:-4566535 | None:intergenic |
GCCAAGCCTCACTGGGCCTT+TGG | 0.294833 | 1.2:+4570686 | MS.gene044078:CDS |
TGTTGCTGTATTTACGAGTA+TGG | 0.314590 | 1.2:+4569598 | MS.gene044078:CDS |
AACTTACATATTCATATAAC+TGG | 0.326706 | 1.2:-4568652 | None:intergenic |
AGGATGCAATGGTGGACTTA+TGG | 0.331252 | 1.2:+4568273 | MS.gene044078:CDS |
GGAAAATCCTATAACGGTTT+AGG | 0.332670 | 1.2:+4566286 | MS.gene044078:CDS |
TGAATTCGACATATAGATTA+GGG | 0.336748 | 1.2:+4566374 | MS.gene044078:CDS |
GTGGTGATGGTCCAGGGTTA+GGG | 0.341154 | 1.2:-4569513 | None:intergenic |
ATGGTAGATGTGACCAGAAC+AGG | 0.354867 | 1.2:+4568368 | MS.gene044078:CDS |
GAAATTCATGGGGTGGTAGC+TGG | 0.356281 | 1.2:+4569383 | MS.gene044078:CDS |
TTGAATTCGACATATAGATT+AGG | 0.369544 | 1.2:+4566373 | MS.gene044078:CDS |
CGTTAGTTAGATCCGCGAAC+CGG | 0.375000 | 1.2:-4566402 | None:intergenic |
CAGACAGATGGTGGCTTGAT+AGG | 0.385214 | 1.2:-4569541 | None:intergenic |
GCACTCCTGCCAAGCCTCAC+TGG | 0.389486 | 1.2:+4570678 | MS.gene044078:CDS |
TGTTCCTGCTTATGATGAAT+TGG | 0.389594 | 1.2:+4568565 | MS.gene044078:CDS |
TCTTGTCAGGGTGTATTTAC+CGG | 0.390275 | 1.2:+4569280 | MS.gene044078:intron |
CCTATCGCCGTTGCTGTTGA+AGG | 0.401421 | 1.2:+4568614 | MS.gene044078:CDS |
ATTGGATTGTGAGAAATTCA+TGG | 0.410060 | 1.2:+4569371 | MS.gene044078:CDS |
GGAGATGATCGACATGTCTA+AGG | 0.412540 | 1.2:-4566176 | None:intergenic |
CCAAGTAACTAACCCTGTTC+TGG | 0.415431 | 1.2:-4568381 | None:intergenic |
TACCCTTACAAGGCTATTGA+TGG | 0.421160 | 1.2:+4568349 | MS.gene044078:CDS |
CTACCATCAATAGCCTTGTA+AGG | 0.422671 | 1.2:-4568352 | None:intergenic |
AATTGCCTGAATCTGTTGAT+TGG | 0.426885 | 1.2:+4566530 | MS.gene044078:CDS |
AAGGCCCAGTGAGGCTTGGC+AGG | 0.429824 | 1.2:-4570683 | None:intergenic |
CACTCCTGCCAAGCCTCACT+GGG | 0.436398 | 1.2:+4570679 | MS.gene044078:CDS |
CCATTCTTAATTGGATAAGA+TGG | 0.437304 | 1.2:-4569481 | None:intergenic |
AAATTCATGGGGTGGTAGCT+GGG | 0.438702 | 1.2:+4569384 | MS.gene044078:CDS |
TCAGCAATCGCAGCTGTTGA+AGG | 0.443055 | 1.2:+4568172 | MS.gene044078:CDS |
TTTCAATGAAGGGAGTTGTT+GGG | 0.446061 | 1.2:+4568144 | MS.gene044078:intron |
GGTGATGGTCCAGGGTTAGG+GGG | 0.448618 | 1.2:-4569511 | None:intergenic |
TGGTGATGGTCCAGGGTTAG+GGG | 0.449337 | 1.2:-4569512 | None:intergenic |
AAGCCTCACTGGGCCTTTGG+TGG | 0.453398 | 1.2:+4570689 | MS.gene044078:CDS |
GTGATGGTCCAGGGTTAGGG+GGG | 0.453507 | 1.2:-4569510 | None:intergenic |
AGGAAGGAAGGTGCTGTTGT+TGG | 0.459612 | 1.2:+4566553 | MS.gene044078:CDS |
TCGTGCTGGACTTTGTCTTA+AGG | 0.462543 | 1.2:+4569720 | MS.gene044078:CDS |
GTTGGATACGGTACAGAAAA+CGG | 0.466958 | 1.2:+4569340 | MS.gene044078:CDS |
TTCACTATCAGAACAAGAAC+TGG | 0.467996 | 1.2:+4568225 | MS.gene044078:CDS |
AATTTCTTCATCCTACGGTT+CGG | 0.472057 | 1.2:-4566463 | None:intergenic |
GGTGAAGGTGGTGATGGTCC+AGG | 0.475487 | 1.2:-4569520 | None:intergenic |
TGATGAATTGGCCTTGCAAA+AGG | 0.476220 | 1.2:+4568577 | MS.gene044078:CDS |
GGAATAAATAAGATTGTGAC+AGG | 0.481755 | 1.2:+4568193 | MS.gene044078:CDS |
TGAAGAAATTGGGTGGTGTA+AGG | 0.482021 | 1.2:+4566476 | MS.gene044078:CDS |
CACCCAATTTCTTCATCCTA+CGG | 0.483167 | 1.2:-4566468 | None:intergenic |
TTGAATGACTTCACTCCCAA+TGG | 0.485328 | 1.2:-4570653 | None:intergenic |
AGTGCTTACCACAACTTGCT+TGG | 0.487527 | 1.2:-4566585 | None:intergenic |
GCTTGTTGATTTGTCTGGGT+GGG | 0.490913 | 1.2:-4566209 | None:intergenic |
CAACAGCAACGGCGATAGGC+TGG | 0.494154 | 1.2:-4568610 | None:intergenic |
ATTAGGGTTGACCCGGTTCG+CGG | 0.494343 | 1.2:+4566390 | MS.gene044078:CDS |
CCTTCAACAGCAACGGCGAT+AGG | 0.495351 | 1.2:-4568614 | None:intergenic |
ACCAAAGGCCCAGTGAGGCT+TGG | 0.495376 | 1.2:-4570687 | None:intergenic |
AACCGTAGGATGAAGAAATT+GGG | 0.496972 | 1.2:+4566466 | MS.gene044078:CDS |
TTGGATACGGTACAGAAAAC+GGG | 0.498134 | 1.2:+4569341 | MS.gene044078:CDS |
CCTGTCTGTGACACTCGTGC+TGG | 0.506173 | 1.2:+4569706 | MS.gene044078:CDS |
TGGAAGATCTTGCTTTGAGT+GGG | 0.510888 | 1.2:+4569618 | MS.gene044078:CDS |
CCATCTTATCCAATTAAGAA+TGG | 0.514473 | 1.2:+4569481 | MS.gene044078:CDS |
CAGGGCAAGAACAACCCATT+GGG | 0.518625 | 1.2:+4570638 | MS.gene044078:intron |
TGAATGACTTCACTCCCAAT+GGG | 0.526000 | 1.2:-4570652 | None:intergenic |
TGCTTGTTGATTTGTCTGGG+TGG | 0.529438 | 1.2:-4566210 | None:intergenic |
AAATTCATTGATGAACATAA+CGG | 0.530458 | 1.2:+4566349 | MS.gene044078:CDS |
TCAAGCAGAGCAGGAAAGTG+TGG | 0.532736 | 1.2:+4569445 | MS.gene044078:CDS |
AAACATGGAAAATCCTATAA+CGG | 0.534401 | 1.2:+4566280 | MS.gene044078:CDS |
GTTAGTTAGATCCGCGAACC+GGG | 0.534519 | 1.2:-4566401 | None:intergenic |
AGCTACTACAGCTGTGCTGA+AGG | 0.535391 | 1.2:+4569568 | MS.gene044078:CDS |
TTTGAGTTCATCATCAGTAA+TGG | 0.537702 | 1.2:+4568304 | MS.gene044078:CDS |
AATCTAGCTTCAAGCAGAGC+AGG | 0.546872 | 1.2:+4569436 | MS.gene044078:CDS |
TTGGATTGTGAGAAATTCAT+GGG | 0.548066 | 1.2:+4569372 | MS.gene044078:CDS |
GACCATGGTGTTGCAGCTGT+TGG | 0.548818 | 1.2:+4569322 | MS.gene044078:CDS |
TGCCTGAATCTGTTGATTGG+AGG | 0.549740 | 1.2:+4566533 | MS.gene044078:CDS |
TGCTGTTGAAGGAGGCGGTA+GGG | 0.550318 | 1.2:+4568625 | MS.gene044078:CDS |
CATCTTGTTCTTACCACCAA+AGG | 0.551674 | 1.2:-4570702 | None:intergenic |
TTGATAGGTGAAGGTGGTGA+TGG | 0.555756 | 1.2:-4569526 | None:intergenic |
GGTGGTAGCTGGGGCGAACA+AGG | 0.556905 | 1.2:+4569394 | MS.gene044078:CDS |
GCCGTTGCTGTTGAAGGAGG+CGG | 0.557434 | 1.2:+4568620 | MS.gene044078:CDS |
GGTGTTGCAGCTGTTGGATA+CGG | 0.561703 | 1.2:+4569328 | MS.gene044078:CDS |
CATATAGATTAGGGTTGACC+CGG | 0.561757 | 1.2:+4566383 | MS.gene044078:CDS |
ATGGAAGATCTTGCTTTGAG+TGG | 0.563923 | 1.2:+4569617 | MS.gene044078:CDS |
TAGTGCTGTTCCACATCTAC+CGG | 0.566895 | 1.2:-4569299 | None:intergenic |
CCAGCACGAGTGTCACAGAC+AGG | 0.571924 | 1.2:-4569706 | None:intergenic |
TGAAGAGGATTACCCTTACA+AGG | 0.572769 | 1.2:+4568339 | MS.gene044078:CDS |
AATCGTTATGCGCCACGTGT+CGG | 0.576425 | 1.2:+4566502 | MS.gene044078:CDS |
AATTCATGGGGTGGTAGCTG+GGG | 0.580864 | 1.2:+4569385 | MS.gene044078:CDS |
GTCAAAGACCAAGCAAGTTG+TGG | 0.584862 | 1.2:+4566577 | MS.gene044078:CDS |
AAGGCCAATTCATCATAAGC+AGG | 0.585009 | 1.2:-4568569 | None:intergenic |
ACAGGGCAAGAACAACCCAT+TGG | 0.586674 | 1.2:+4570637 | MS.gene044078:intron |
GGTGTATTTACCGGTAGATG+TGG | 0.590389 | 1.2:+4569289 | MS.gene044078:CDS |
TACCATCAATAGCCTTGTAA+GGG | 0.599159 | 1.2:-4568351 | None:intergenic |
GAGTTCATCATCAGTAATGG+TGG | 0.599792 | 1.2:+4568307 | MS.gene044078:CDS |
ACTATCAGAACAAGAACTGG+TGG | 0.602270 | 1.2:+4568228 | MS.gene044078:CDS |
GGCTAGTGAAACTGTGAAGG+TGG | 0.603824 | 1.2:-4566155 | None:intergenic |
GTGAAGGTGGTGATGGTCCA+GGG | 0.603987 | 1.2:-4569519 | None:intergenic |
ATCGCCGTTGCTGTTGAAGG+AGG | 0.609464 | 1.2:+4568617 | MS.gene044078:CDS |
TTGCTGTTGAAGGAGGCGGT+AGG | 0.609931 | 1.2:+4568624 | MS.gene044078:CDS |
GAAGAGTGGTTAGTGAAACA+TGG | 0.615801 | 1.2:+4566265 | MS.gene044078:CDS |
CAAAGATCGATCCGAACCGT+AGG | 0.618623 | 1.2:+4566452 | MS.gene044078:CDS |
CAGCAAGTAGCAGACTCAAG+AGG | 0.620435 | 1.2:-4569649 | None:intergenic |
TAGTAGCTGTCACAGACAGA+TGG | 0.620790 | 1.2:-4569553 | None:intergenic |
TGGTAGATGTGACCAGAACA+GGG | 0.623188 | 1.2:+4568369 | MS.gene044078:CDS |
TGGTGGCATTGACTCTGAAG+AGG | 0.626193 | 1.2:+4568324 | MS.gene044078:CDS |
TCATACAACGAAGGATGCAA+TGG | 0.627683 | 1.2:+4568262 | MS.gene044078:CDS |
TACAACGAAGGATGCAATGG+TGG | 0.630463 | 1.2:+4568265 | MS.gene044078:CDS |
GGCAATTTATCACCGACACG+TGG | 0.638153 | 1.2:-4566514 | None:intergenic |
TGTTGACTATGTACGAAGAG+TGG | 0.640568 | 1.2:+4566251 | MS.gene044078:CDS |
TAGCTGTCACAGACAGATGG+TGG | 0.645708 | 1.2:-4569550 | None:intergenic |
ATTACTGATGATGAACTCAA+AGG | 0.646757 | 1.2:-4568302 | None:intergenic |
GGTGGCTTGATAGGTGAAGG+TGG | 0.647988 | 1.2:-4569532 | None:intergenic |
ACCGCCTCCTTCAACAGCAA+CGG | 0.651172 | 1.2:-4568621 | None:intergenic |
TCTGTTGATTGGAGGAAGGA+AGG | 0.651628 | 1.2:+4566541 | MS.gene044078:CDS |
TAAGGCTAGTGAAACTGTGA+AGG | 0.654033 | 1.2:-4566158 | None:intergenic |
TGAATCTGTTGATTGGAGGA+AGG | 0.656666 | 1.2:+4566537 | MS.gene044078:CDS |
CACAGACAGGATACTCATGA+GGG | 0.662230 | 1.2:-4569693 | None:intergenic |
TCACAGACAGGATACTCATG+AGG | 0.662392 | 1.2:-4569694 | None:intergenic |
ATCCAACAGCTGCAACACCA+TGG | 0.676166 | 1.2:-4569324 | None:intergenic |
CGTAGGATGAAGAAATTGGG+TGG | 0.680087 | 1.2:+4566469 | MS.gene044078:CDS |
GATGGTGGCTTGATAGGTGA+AGG | 0.689206 | 1.2:-4569535 | None:intergenic |
GGAAGATCTTGCTTTGAGTG+GGG | 0.689687 | 1.2:+4569619 | MS.gene044078:CDS |
ATTGTGAGAAATTCATGGGG+TGG | 0.703535 | 1.2:+4569376 | MS.gene044078:CDS |
TGTGATACATCATACAACGA+AGG | 0.706999 | 1.2:+4568253 | MS.gene044078:CDS |
TGTGGAACAGCACTAGACCA+TGG | 0.711951 | 1.2:+4569307 | MS.gene044078:CDS |
TTACCACCAAAGGCCCAGTG+AGG | 0.714697 | 1.2:-4570692 | None:intergenic |
TGGATTGTGAGAAATTCATG+GGG | 0.737069 | 1.2:+4569373 | MS.gene044078:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAAAAAAAATAAATTAAC+AGG | - | chr1.2:4569191-4569210 | None:intergenic | 10.0% |
!! | TAAGTAATACAAAAAAAAAA+AGG | - | chr1.2:4567472-4567491 | None:intergenic | 10.0% |
!!! | ACAAAATTTTAATTCATAAA+AGG | + | chr1.2:4567162-4567181 | MS.gene044078:intron | 10.0% |
!!! | CAAAATTTTAATTCATAAAA+GGG | + | chr1.2:4567163-4567182 | MS.gene044078:intron | 10.0% |
!!! | CCTATAATTTTTTTATAAAA+AGG | + | chr1.2:4570285-4570304 | MS.gene044078:intron | 10.0% |
!!! | CCTTTTTATAAAAAAATTAT+AGG | - | chr1.2:4570288-4570307 | None:intergenic | 10.0% |
!! | TTAAACTAAAAACAATTCTT+TGG | + | chr1.2:4567425-4567444 | MS.gene044078:intron | 15.0% |
!!! | AACAAAAAAGCATTATATTA+TGG | - | chr1.2:4567940-4567959 | None:intergenic | 15.0% |
!!! | ATAATATTAGCAATTTTTTG+TGG | - | chr1.2:4568116-4568135 | None:intergenic | 15.0% |
!!! | TCTTAATTTAGTTGTTTTAT+CGG | + | chr1.2:4570550-4570569 | MS.gene044078:intron | 15.0% |
!!! | TTAGATTTTTCTTATTTTCT+TGG | + | chr1.2:4566972-4566991 | MS.gene044078:intron | 15.0% |
!! | AAACAAAGTCAAATTCTTAT+GGG | + | chr1.2:4570506-4570525 | MS.gene044078:intron | 20.0% |
!! | AAATTCATTGATGAACATAA+CGG | + | chr1.2:4566349-4566368 | MS.gene044078:CDS | 20.0% |
!! | AACTTACATATTCATATAAC+TGG | - | chr1.2:4568655-4568674 | None:intergenic | 20.0% |
!! | ACAATACACCAAAAAATTAT+GGG | - | chr1.2:4567236-4567255 | None:intergenic | 20.0% |
!! | ATGTATTGTTAGATACAATA+TGG | - | chr1.2:4569013-4569032 | None:intergenic | 20.0% |
!! | ATTAATTCTACTATGAAACT+AGG | + | chr1.2:4568680-4568699 | MS.gene044078:intron | 20.0% |
!! | TACAATACACCAAAAAATTA+TGG | - | chr1.2:4567237-4567256 | None:intergenic | 20.0% |
!! | TATAAATTGTTTAGAAGAGA+AGG | - | chr1.2:4569050-4569069 | None:intergenic | 20.0% |
!! | TATGTTCATCAATGAATTTA+AGG | - | chr1.2:4566348-4566367 | None:intergenic | 20.0% |
!! | TATTGTATCTAACAATACAT+TGG | + | chr1.2:4569013-4569032 | MS.gene044078:intron | 20.0% |
!!! | ATCTTCTTTTTTTCAATGAA+GGG | + | chr1.2:4568134-4568153 | MS.gene044078:intron | 20.0% |
!!! | ATTTTCTTGGATATGTTATT+AGG | + | chr1.2:4566985-4567004 | MS.gene044078:intron | 20.0% |
!!! | CTTAATTTAGTTGTTTTATC+GGG | + | chr1.2:4570551-4570570 | MS.gene044078:intron | 20.0% |
!!! | TAATGATGTACTTTAATTTG+TGG | + | chr1.2:4566892-4566911 | MS.gene044078:intron | 20.0% |
!!! | TATATTTCGTATGACTTTTA+AGG | - | chr1.2:4567712-4567731 | None:intergenic | 20.0% |
!!! | TATCTTCTTTTTTTCAATGA+AGG | + | chr1.2:4568133-4568152 | MS.gene044078:intron | 20.0% |
!!! | TCCAAGTAATGTTTTAAAAA+TGG | - | chr1.2:4569975-4569994 | None:intergenic | 20.0% |
!!! | TCCATTTTTAAAACATTACT+TGG | + | chr1.2:4569971-4569990 | MS.gene044078:intron | 20.0% |
! | AAACATGGAAAATCCTATAA+CGG | + | chr1.2:4566280-4566299 | MS.gene044078:CDS | 25.0% |
! | AATATGGAATAAAAATTCCC+TGG | - | chr1.2:4568794-4568813 | None:intergenic | 25.0% |
! | AATCAAACTCAGTTAATCAT+GGG | - | chr1.2:4568038-4568057 | None:intergenic | 25.0% |
! | ACAATATGGTTTAGATACAT+TGG | - | chr1.2:4568999-4569018 | None:intergenic | 25.0% |
! | ACGAATAATAGACATGTTAT+AGG | - | chr1.2:4570405-4570424 | None:intergenic | 25.0% |
! | ATGACAATAGTAAATGTTTG+TGG | + | chr1.2:4568418-4568437 | MS.gene044078:intron | 25.0% |
! | ATTGATATATTGAGTACTCT+TGG | - | chr1.2:4567888-4567907 | None:intergenic | 25.0% |
! | CAAACAAAGTCAAATTCTTA+TGG | + | chr1.2:4570505-4570524 | MS.gene044078:intron | 25.0% |
! | CAATCATTGGTGTAATAATA+TGG | + | chr1.2:4567904-4567923 | MS.gene044078:intron | 25.0% |
! | CTTATAATATATCCATAAGC+TGG | + | chr1.2:4570229-4570248 | MS.gene044078:intron | 25.0% |
! | GTAAACAAACCATACAAATT+TGG | - | chr1.2:4570583-4570602 | None:intergenic | 25.0% |
! | GTAAATCAAAATCAATCGTA+TGG | - | chr1.2:4567397-4567416 | None:intergenic | 25.0% |
! | GTACTCAATATATCAATCAT+TGG | + | chr1.2:4567891-4567910 | MS.gene044078:intron | 25.0% |
! | TAACACTCTAATTCTTTCAT+TGG | + | chr1.2:4568470-4568489 | MS.gene044078:intron | 25.0% |
! | TAATCAAACTCAGTTAATCA+TGG | - | chr1.2:4568039-4568058 | None:intergenic | 25.0% |
! | TCTATCAATCAATCATAACA+TGG | + | chr1.2:4567657-4567676 | MS.gene044078:intron | 25.0% |
! | TGAATTCGACATATAGATTA+GGG | + | chr1.2:4566374-4566393 | MS.gene044078:CDS | 25.0% |
! | TGATCAAGCACATAAAAATT+TGG | - | chr1.2:4570618-4570637 | None:intergenic | 25.0% |
! | TGATTAACTGAGTTTGATTA+AGG | + | chr1.2:4568039-4568058 | MS.gene044078:intron | 25.0% |
! | TGCATTTGTTTGTTCAATAT+GGG | + | chr1.2:4567613-4567632 | MS.gene044078:intron | 25.0% |
! | TTATTTAAACTGTTTGATCG+TGG | - | chr1.2:4569895-4569914 | None:intergenic | 25.0% |
! | TTGAATAAAAATCATCTGTC+TGG | + | chr1.2:4569122-4569141 | MS.gene044078:intron | 25.0% |
! | TTGAATTCGACATATAGATT+AGG | + | chr1.2:4566373-4566392 | MS.gene044078:CDS | 25.0% |
! | TTGATATATTGAGTACTCTT+GGG | - | chr1.2:4567887-4567906 | None:intergenic | 25.0% |
! | TTGCATTTGTTTGTTCAATA+TGG | + | chr1.2:4567612-4567631 | MS.gene044078:intron | 25.0% |
!! | AATTTTATACTGTGTTGCAT+TGG | + | chr1.2:4568703-4568722 | MS.gene044078:intron | 25.0% |
!! | AGTATTCTGACTTTCTAAAA+TGG | + | chr1.2:4568838-4568857 | MS.gene044078:intron | 25.0% |
!! | ATTTTATACTGTGTTGCATT+GGG | + | chr1.2:4568704-4568723 | MS.gene044078:intron | 25.0% |
!! | CATAAGAATTTGACTTTGTT+TGG | - | chr1.2:4570507-4570526 | None:intergenic | 25.0% |
!! | TTAAGGAACATGATAGTTTT+TGG | + | chr1.2:4568056-4568075 | MS.gene044078:intron | 25.0% |
!! | TTTAAGGTAGACATGATTAA+AGG | - | chr1.2:4567696-4567715 | None:intergenic | 25.0% |
!!! | ATTTTAATGATCTGAGAGTT+AGG | - | chr1.2:4567350-4567369 | None:intergenic | 25.0% |
!!! | CTTTGTTTTGTAGTCATATA+AGG | + | chr1.2:4567503-4567522 | MS.gene044078:intron | 25.0% |
!!! | TGATTTAAAATTTTGTGCAC+CGG | - | chr1.2:4567303-4567322 | None:intergenic | 25.0% |
!!! | TTCATTGGTTTTAAACTGTT+TGG | + | chr1.2:4568485-4568504 | MS.gene044078:intron | 25.0% |
!!! | TTTTTGATTGGATTTTCACT+TGG | + | chr1.2:4569779-4569798 | MS.gene044078:intron | 25.0% |
AGTAAAAGATAAGGTTGACT+TGG | - | chr1.2:4569751-4569770 | None:intergenic | 30.0% | |
ATAACGTCATATTCATGTCA+TGG | + | chr1.2:4568727-4568746 | MS.gene044078:intron | 30.0% | |
ATACAATACACCAAGAAACT+GGG | - | chr1.2:4567270-4567289 | None:intergenic | 30.0% | |
ATCAAACTCAGTTAATCATG+GGG | - | chr1.2:4568037-4568056 | None:intergenic | 30.0% | |
ATCCATGTGTAACAATATCT+GGG | + | chr1.2:4566852-4566871 | MS.gene044078:intron | 30.0% | |
ATGAAATCCCAAAGCAAATA+AGG | - | chr1.2:4567091-4567110 | None:intergenic | 30.0% | |
ATGCAAGCAAGTAAAAGATA+AGG | - | chr1.2:4569760-4569779 | None:intergenic | 30.0% | |
ATTGCGTGATTATGTGAATA+TGG | - | chr1.2:4568810-4568829 | None:intergenic | 30.0% | |
ATTGGATTGTGAGAAATTCA+TGG | + | chr1.2:4569371-4569390 | MS.gene044078:CDS | 30.0% | |
CATTACTTGGAACTAATTGT+TGG | + | chr1.2:4569984-4570003 | MS.gene044078:intron | 30.0% | |
CCAATTTGAGCTGTTTAAAA+CGG | - | chr1.2:4569865-4569884 | None:intergenic | 30.0% | |
CCATCTTATCCAATTAAGAA+TGG | + | chr1.2:4569481-4569500 | MS.gene044078:CDS | 30.0% | |
CCATTCTTAATTGGATAAGA+TGG | - | chr1.2:4569484-4569503 | None:intergenic | 30.0% | |
GGAATAAATAAGATTGTGAC+AGG | + | chr1.2:4568193-4568212 | MS.gene044078:CDS | 30.0% | |
GGGAATTATCCAAATTTGTA+TGG | + | chr1.2:4570571-4570590 | MS.gene044078:intron | 30.0% | |
GTAGATAATCATGTAACATG+TGG | + | chr1.2:4567826-4567845 | MS.gene044078:intron | 30.0% | |
GTTTAGGTGAAAAAGACAAA+AGG | + | chr1.2:4566302-4566321 | MS.gene044078:CDS | 30.0% | |
TACTAGGGATATCTTTCATT+CGG | - | chr1.2:4568931-4568950 | None:intergenic | 30.0% | |
TACTTCTGCTCAAGAAATAA+AGG | - | chr1.2:4567983-4568002 | None:intergenic | 30.0% | |
TTGGATTGTGAGAAATTCAT+GGG | + | chr1.2:4569372-4569391 | MS.gene044078:CDS | 30.0% | |
TTTACTTTGCTTCACAAGAT+TGG | + | chr1.2:4569206-4569225 | MS.gene044078:intron | 30.0% | |
TTTATCTACTGAGACTGTTT+GGG | + | chr1.2:4570362-4570381 | MS.gene044078:intron | 30.0% | |
TTTGTCTCTATCGAATGTAT+AGG | - | chr1.2:4569085-4569104 | None:intergenic | 30.0% | |
! | AGAGTATAGAAGCAAGTTTT+TGG | + | chr1.2:4566426-4566445 | MS.gene044078:CDS | 30.0% |
! | ATTACTGATGATGAACTCAA+AGG | - | chr1.2:4568305-4568324 | None:intergenic | 30.0% |
! | ATTTTTATGTGCTTGATCAC+AGG | + | chr1.2:4570619-4570638 | MS.gene044078:intron | 30.0% |
! | GAGTATAGAAGCAAGTTTTT+GGG | + | chr1.2:4566427-4566446 | MS.gene044078:CDS | 30.0% |
! | TACTTGCTTGCATTTTTGAT+TGG | + | chr1.2:4569767-4569786 | MS.gene044078:intron | 30.0% |
! | TGGATTTCCTTATTTGCTTT+GGG | + | chr1.2:4567081-4567100 | MS.gene044078:intron | 30.0% |
! | TTTGAGTTCATCATCAGTAA+TGG | + | chr1.2:4568304-4568323 | MS.gene044078:CDS | 30.0% |
! | TTTTTATGTGCTTGATCACA+GGG | + | chr1.2:4570620-4570639 | MS.gene044078:intron | 30.0% |
! | TTTTTCACCTAAACCGTTAT+AGG | - | chr1.2:4566296-4566315 | None:intergenic | 30.0% |
!! | CTAATTGTTGGCTACTATTT+TGG | + | chr1.2:4569996-4570015 | MS.gene044078:intron | 30.0% |
!! | GATTTAAAATTTTGTGCACC+GGG | - | chr1.2:4567302-4567321 | None:intergenic | 30.0% |
!!! | GGATTTTTTTCCTGTTGATA+GGG | + | chr1.2:4570017-4570036 | MS.gene044078:intron | 30.0% |
!!! | TGGATTTTTTTCCTGTTGAT+AGG | + | chr1.2:4570016-4570035 | MS.gene044078:intron | 30.0% |
!!! | TTTTGCTTGTTGATTTGTCT+GGG | - | chr1.2:4566216-4566235 | None:intergenic | 30.0% |
AAACGTAAAGACTTCAGTCA+TGG | + | chr1.2:4569834-4569853 | MS.gene044078:intron | 35.0% | |
AAAGTCCAAATGAACGCAAA+AGG | - | chr1.2:4570050-4570069 | None:intergenic | 35.0% | |
AACCGTAGGATGAAGAAATT+GGG | + | chr1.2:4566466-4566485 | MS.gene044078:CDS | 35.0% | |
AAGTCCAAATGAACGCAAAA+GGG | - | chr1.2:4570049-4570068 | None:intergenic | 35.0% | |
AATAAAAATTCCCTGGAGTC+AGG | - | chr1.2:4568787-4568806 | None:intergenic | 35.0% | |
AATTGCCTGAATCTGTTGAT+TGG | + | chr1.2:4566530-4566549 | MS.gene044078:CDS | 35.0% | |
AATTTCTTCATCCTACGGTT+CGG | - | chr1.2:4566466-4566485 | None:intergenic | 35.0% | |
AGTCTTTACGTTTCAATGTC+CGG | - | chr1.2:4569827-4569846 | None:intergenic | 35.0% | |
ATAAAAATTCCCTGGAGTCA+GGG | - | chr1.2:4568786-4568805 | None:intergenic | 35.0% | |
ATGAAAGATATCCCTAGTAG+TGG | + | chr1.2:4568932-4568951 | MS.gene044078:intron | 35.0% | |
ATGCTATATAGCCACTACTA+GGG | - | chr1.2:4568946-4568965 | None:intergenic | 35.0% | |
ATTCCATTTGTCTCTTGTCA+GGG | + | chr1.2:4569268-4569287 | MS.gene044078:intron | 35.0% | |
CAAATGCAAACCAAGAATTC+TGG | - | chr1.2:4567601-4567620 | None:intergenic | 35.0% | |
CAATGAACAGACACTATCTA+CGG | - | chr1.2:4569923-4569942 | None:intergenic | 35.0% | |
CAGAAAACGGGAAAGATTAT+TGG | + | chr1.2:4569353-4569372 | MS.gene044078:CDS | 35.0% | |
CAGATATTGTTACACATGGA+TGG | - | chr1.2:4566853-4566872 | None:intergenic | 35.0% | |
CATACAATACACCAAGAAAC+TGG | - | chr1.2:4567271-4567290 | None:intergenic | 35.0% | |
CATCCATGTGTAACAATATC+TGG | + | chr1.2:4566851-4566870 | MS.gene044078:intron | 35.0% | |
CCTAAAATCACCAGAATTCT+TGG | + | chr1.2:4567588-4567607 | MS.gene044078:intron | 35.0% | |
CTTGATCCTGATAATTCATC+TGG | + | chr1.2:4567061-4567080 | MS.gene044078:intron | 35.0% | |
GATTCAAAGCATGTTTCAGA+TGG | + | chr1.2:4568860-4568879 | MS.gene044078:intron | 35.0% | |
GGAAAATCCTATAACGGTTT+AGG | + | chr1.2:4566286-4566305 | MS.gene044078:CDS | 35.0% | |
GGAAATCCAGATGAATTATC+AGG | - | chr1.2:4567070-4567089 | None:intergenic | 35.0% | |
GGCTATTGAAGATAATGTGA+AGG | - | chr1.2:4569170-4569189 | None:intergenic | 35.0% | |
GTAGTCATATAAGGTCTGTT+TGG | + | chr1.2:4567512-4567531 | MS.gene044078:intron | 35.0% | |
GTGGAAGATAGTTAATCAGT+AGG | + | chr1.2:4568437-4568456 | MS.gene044078:intron | 35.0% | |
GTTTATCTACTGAGACTGTT+TGG | + | chr1.2:4570361-4570380 | MS.gene044078:intron | 35.0% | |
TATCGAATGTATAGGCAATG+AGG | - | chr1.2:4569077-4569096 | None:intergenic | 35.0% | |
TATTCCATTTGTCTCTTGTC+AGG | + | chr1.2:4569267-4569286 | MS.gene044078:intron | 35.0% | |
TGGATTGTGAGAAATTCATG+GGG | + | chr1.2:4569373-4569392 | MS.gene044078:CDS | 35.0% | |
TGTGATACATCATACAACGA+AGG | + | chr1.2:4568253-4568272 | MS.gene044078:CDS | 35.0% | |
TGTTCCTGCTTATGATGAAT+TGG | + | chr1.2:4568565-4568584 | MS.gene044078:CDS | 35.0% | |
TGTTGCTGTATTTACGAGTA+TGG | + | chr1.2:4569598-4569617 | MS.gene044078:CDS | 35.0% | |
TTAATGATCTGAGAGTTAGG+AGG | - | chr1.2:4567347-4567366 | None:intergenic | 35.0% | |
TTCACTATCAGAACAAGAAC+TGG | + | chr1.2:4568225-4568244 | MS.gene044078:CDS | 35.0% | |
TTCCCAGATATTGTTACACA+TGG | - | chr1.2:4566857-4566876 | None:intergenic | 35.0% | |
TTTCAATGAAGGGAGTTGTT+GGG | + | chr1.2:4568144-4568163 | MS.gene044078:intron | 35.0% | |
TTTGGATTTCGTTTGCAGTA+TGG | + | chr1.2:4567443-4567462 | MS.gene044078:intron | 35.0% | |
! | CCAAGAATTCTGGTGATTTT+AGG | - | chr1.2:4567591-4567610 | None:intergenic | 35.0% |
! | CCTTAAAAGTTTTACGACGA+CGG | + | chr1.2:4567753-4567772 | MS.gene044078:intron | 35.0% |
! | CTGGATTTCCTTATTTGCTT+TGG | + | chr1.2:4567080-4567099 | MS.gene044078:intron | 35.0% |
! | GATAATCTGAAACCAGCTTA+TGG | - | chr1.2:4570244-4570263 | None:intergenic | 35.0% |
! | GTTTCTTGGTGTATTGTATG+TGG | + | chr1.2:4567271-4567290 | MS.gene044078:intron | 35.0% |
! | TTTTCAATGAAGGGAGTTGT+TGG | + | chr1.2:4568143-4568162 | MS.gene044078:intron | 35.0% |
!! | CAATGCTTTAAAAGCCAAAC+CGG | + | chr1.2:4569805-4569824 | MS.gene044078:intron | 35.0% |
!! | CCGTTTTAAACAGCTCAAAT+TGG | + | chr1.2:4569862-4569881 | MS.gene044078:intron | 35.0% |
!! | TACCATCAATAGCCTTGTAA+GGG | - | chr1.2:4568354-4568373 | None:intergenic | 35.0% |
!!! | CTTTTGCTTGTTGATTTGTC+TGG | - | chr1.2:4566217-4566236 | None:intergenic | 35.0% |
AAAAATTATGGGACCCTTCC+CGG | - | chr1.2:4567225-4567244 | None:intergenic | 40.0% | |
AAAATCATCTGTCTGGCAAG+TGG | + | chr1.2:4569129-4569148 | MS.gene044078:intron | 40.0% | |
AAACCAAATTCTCTGCAGTC+AGG | - | chr1.2:4568763-4568782 | None:intergenic | 40.0% | |
AACAGACACTATCTACGGTT+CGG | - | chr1.2:4569918-4569937 | None:intergenic | 40.0% | |
AACCAAATTCTCTGCAGTCA+GGG | - | chr1.2:4568762-4568781 | None:intergenic | 40.0% | |
AAGGCCAATTCATCATAAGC+AGG | - | chr1.2:4568572-4568591 | None:intergenic | 40.0% | |
ACTATCAGAACAAGAACTGG+TGG | + | chr1.2:4568228-4568247 | MS.gene044078:CDS | 40.0% | |
ATTGTGAGAAATTCATGGGG+TGG | + | chr1.2:4569376-4569395 | MS.gene044078:CDS | 40.0% | |
CACCCAATTTCTTCATCCTA+CGG | - | chr1.2:4566471-4566490 | None:intergenic | 40.0% | |
CATATAGATTAGGGTTGACC+CGG | + | chr1.2:4566383-4566402 | MS.gene044078:CDS | 40.0% | |
CATCTTGTTCTTACCACCAA+AGG | - | chr1.2:4570705-4570724 | None:intergenic | 40.0% | |
CATGCTATATAGCCACTACT+AGG | - | chr1.2:4568947-4568966 | None:intergenic | 40.0% | |
CTAGTAGTGGCTATATAGCA+TGG | + | chr1.2:4568945-4568964 | MS.gene044078:intron | 40.0% | |
GAACCGTAGGATGAAGAAAT+TGG | + | chr1.2:4566465-4566484 | MS.gene044078:CDS | 40.0% | |
GAAGAGTGGTTAGTGAAACA+TGG | + | chr1.2:4566265-4566284 | MS.gene044078:CDS | 40.0% | |
GAGTTCATCATCAGTAATGG+TGG | + | chr1.2:4568307-4568326 | MS.gene044078:CDS | 40.0% | |
GCAATCACGCTTTGTGATTT+CGG | - | chr1.2:4568887-4568906 | None:intergenic | 40.0% | |
GGGTTCTGTCCATTCTTAAT+TGG | - | chr1.2:4569493-4569512 | None:intergenic | 40.0% | |
GTTGGATACGGTACAGAAAA+CGG | + | chr1.2:4569340-4569359 | MS.gene044078:CDS | 40.0% | |
TAAAACTCCCCGCATAAGTA+GGG | + | chr1.2:4567198-4567217 | MS.gene044078:intron | 40.0% | |
TAAGGCTAGTGAAACTGTGA+AGG | - | chr1.2:4566161-4566180 | None:intergenic | 40.0% | |
TACCCTTACAAGGCTATTGA+TGG | + | chr1.2:4568349-4568368 | MS.gene044078:CDS | 40.0% | |
TATAGCATGGCAGCAATGAA+TGG | + | chr1.2:4568958-4568977 | MS.gene044078:intron | 40.0% | |
TCAGTTAATCATGGGGTGAA+GGG | - | chr1.2:4568030-4568049 | None:intergenic | 40.0% | |
TCATACAACGAAGGATGCAA+TGG | + | chr1.2:4568262-4568281 | MS.gene044078:CDS | 40.0% | |
TCTTGTCAGGGTGTATTTAC+CGG | + | chr1.2:4569280-4569299 | MS.gene044078:intron | 40.0% | |
TGAAGAAATTGGGTGGTGTA+AGG | + | chr1.2:4566476-4566495 | MS.gene044078:CDS | 40.0% | |
TGAAGAGGATTACCCTTACA+AGG | + | chr1.2:4568339-4568358 | MS.gene044078:CDS | 40.0% | |
TGAATGACTTCACTCCCAAT+GGG | - | chr1.2:4570655-4570674 | None:intergenic | 40.0% | |
TGTAAGATATCCATCAGCTG+TGG | - | chr1.2:4567568-4567587 | None:intergenic | 40.0% | |
TTACGTTTCAATGTCCGGTT+TGG | - | chr1.2:4569822-4569841 | None:intergenic | 40.0% | |
TTCCTCCAATCAACAGATTC+AGG | - | chr1.2:4566538-4566557 | None:intergenic | 40.0% | |
TTGAATGACTTCACTCCCAA+TGG | - | chr1.2:4570656-4570675 | None:intergenic | 40.0% | |
TTGGATACGGTACAGAAAAC+GGG | + | chr1.2:4569341-4569360 | MS.gene044078:CDS | 40.0% | |
! | AAAATTTTGTGCACCGGGTA+AGG | - | chr1.2:4567297-4567316 | None:intergenic | 40.0% |
! | ATGGAAGATCTTGCTTTGAG+TGG | + | chr1.2:4569617-4569636 | MS.gene044078:CDS | 40.0% |
! | ATGTCCCTTTTGCGTTCATT+TGG | + | chr1.2:4570042-4570061 | MS.gene044078:intron | 40.0% |
! | CCGTCGTCGTAAAACTTTTA+AGG | - | chr1.2:4567756-4567775 | None:intergenic | 40.0% |
! | TGAATCTGTTGATTGGAGGA+AGG | + | chr1.2:4566537-4566556 | MS.gene044078:CDS | 40.0% |
! | TGGAAGATCTTGCTTTGAGT+GGG | + | chr1.2:4569618-4569637 | MS.gene044078:CDS | 40.0% |
! | TGTTGACTATGTACGAAGAG+TGG | + | chr1.2:4566251-4566270 | MS.gene044078:CDS | 40.0% |
!! | CTACCATCAATAGCCTTGTA+AGG | - | chr1.2:4568355-4568374 | None:intergenic | 40.0% |
!! | TGATGAATTGGCCTTGCAAA+AGG | + | chr1.2:4568577-4568596 | MS.gene044078:CDS | 40.0% |
!!! | CGGTTTGGCTTTTAAAGCAT+TGG | - | chr1.2:4569807-4569826 | None:intergenic | 40.0% |
!!! | GGAAGGGTCCCATAATTTTT+TGG | + | chr1.2:4567225-4567244 | MS.gene044078:intron | 40.0% |
AAATTCATGGGGTGGTAGCT+GGG | + | chr1.2:4569384-4569403 | MS.gene044078:CDS | 45.0% | |
ACACCCTGACAAGAGACAAA+TGG | - | chr1.2:4569274-4569293 | None:intergenic | 45.0% | |
ACTGGTTGAACTGTCTTGTC+TGG | + | chr1.2:4569947-4569966 | MS.gene044078:intron | 45.0% | |
AGTATCATCACCACAGCTGA+TGG | + | chr1.2:4567555-4567574 | MS.gene044078:intron | 45.0% | |
ATGGTAGATGTGACCAGAAC+AGG | + | chr1.2:4568368-4568387 | MS.gene044078:CDS | 45.0% | |
CACAGACAGGATACTCATGA+GGG | - | chr1.2:4569696-4569715 | None:intergenic | 45.0% | |
CCAAGTAACTAACCCTGTTC+TGG | - | chr1.2:4568384-4568403 | None:intergenic | 45.0% | |
CGTAGGATGAAGAAATTGGG+TGG | + | chr1.2:4566469-4566488 | MS.gene044078:CDS | 45.0% | |
CTAAAACTCCCCGCATAAGT+AGG | + | chr1.2:4567197-4567216 | MS.gene044078:intron | 45.0% | |
CTCAGTTAATCATGGGGTGA+AGG | - | chr1.2:4568031-4568050 | None:intergenic | 45.0% | |
GGAGATGATCGACATGTCTA+AGG | - | chr1.2:4566179-4566198 | None:intergenic | 45.0% | |
GGTGTATTTACCGGTAGATG+TGG | + | chr1.2:4569289-4569308 | MS.gene044078:CDS | 45.0% | |
GTCAAAGACCAAGCAAGTTG+TGG | + | chr1.2:4566577-4566596 | MS.gene044078:CDS | 45.0% | |
GTGTCTGTTCATTGCTCAAC+TGG | + | chr1.2:4569929-4569948 | MS.gene044078:intron | 45.0% | |
TACAACGAAGGATGCAATGG+TGG | + | chr1.2:4568265-4568284 | MS.gene044078:CDS | 45.0% | |
TAGTAGCTGTCACAGACAGA+TGG | - | chr1.2:4569556-4569575 | None:intergenic | 45.0% | |
TCACAGACAGGATACTCATG+AGG | - | chr1.2:4569697-4569716 | None:intergenic | 45.0% | |
TCGTGCTGGACTTTGTCTTA+AGG | + | chr1.2:4569720-4569739 | MS.gene044078:CDS | 45.0% | |
TGAGACTGTTTGGGAGAACA+TGG | + | chr1.2:4570371-4570390 | MS.gene044078:intron | 45.0% | |
TGGTAGATGTGACCAGAACA+GGG | + | chr1.2:4568369-4568388 | MS.gene044078:CDS | 45.0% | |
TTCCCTGACTGCAGAGAATT+TGG | + | chr1.2:4568757-4568776 | MS.gene044078:intron | 45.0% | |
TTGATAGGTGAAGGTGGTGA+TGG | - | chr1.2:4569529-4569548 | None:intergenic | 45.0% | |
! | AATCTAGCTTCAAGCAGAGC+AGG | + | chr1.2:4569436-4569455 | MS.gene044078:CDS | 45.0% |
! | AATTTGGTTTCCCTGACTCC+AGG | + | chr1.2:4568773-4568792 | MS.gene044078:intron | 45.0% |
! | AGTGCTTACCACAACTTGCT+TGG | - | chr1.2:4566588-4566607 | None:intergenic | 45.0% |
! | ATTTGGTTTCCCTGACTCCA+GGG | + | chr1.2:4568774-4568793 | MS.gene044078:intron | 45.0% |
! | GGAAGATCTTGCTTTGAGTG+GGG | + | chr1.2:4569619-4569638 | MS.gene044078:CDS | 45.0% |
! | GTATTGTATGTGGCCTTACC+CGG | + | chr1.2:4567281-4567300 | MS.gene044078:intron | 45.0% |
! | GTTTGCAACAGCCTTTTGCA+AGG | - | chr1.2:4568591-4568610 | None:intergenic | 45.0% |
! | TAGTGCTGTTCCACATCTAC+CGG | - | chr1.2:4569302-4569321 | None:intergenic | 45.0% |
! | TCTGTTGATTGGAGGAAGGA+AGG | + | chr1.2:4566541-4566560 | MS.gene044078:CDS | 45.0% |
! | TGCCTGAATCTGTTGATTGG+AGG | + | chr1.2:4566533-4566552 | MS.gene044078:CDS | 45.0% |
!! | AGGATGCAATGGTGGACTTA+TGG | + | chr1.2:4568273-4568292 | MS.gene044078:CDS | 45.0% |
!! | CCAGAACAGGGTTAGTTACT+TGG | + | chr1.2:4568381-4568400 | MS.gene044078:intron | 45.0% |
!! | GCTTGTTGATTTGTCTGGGT+GGG | - | chr1.2:4566212-4566231 | None:intergenic | 45.0% |
!! | TGCTTGTTGATTTGTCTGGG+TGG | - | chr1.2:4566213-4566232 | None:intergenic | 45.0% |
!!! | TAATTTTAAAATTAAATACA+AGG | + | chr1.2:4566940-4566959 | MS.gene044078:intron | 5.0% |
AATCGTTATGCGCCACGTGT+CGG | + | chr1.2:4566502-4566521 | MS.gene044078:CDS | 50.0% | |
AATTCATGGGGTGGTAGCTG+GGG | + | chr1.2:4569385-4569404 | MS.gene044078:CDS | 50.0% | |
ACAGGGCAAGAACAACCCAT+TGG | + | chr1.2:4570637-4570656 | MS.gene044078:intron | 50.0% | |
AGCTACTACAGCTGTGCTGA+AGG | + | chr1.2:4569568-4569587 | MS.gene044078:CDS | 50.0% | |
AGGGACATCACCCTATCAAC+AGG | - | chr1.2:4570030-4570049 | None:intergenic | 50.0% | |
ATCCAACAGCTGCAACACCA+TGG | - | chr1.2:4569327-4569346 | None:intergenic | 50.0% | |
CAAAGATCGATCCGAACCGT+AGG | + | chr1.2:4566452-4566471 | MS.gene044078:CDS | 50.0% | |
CAGCAAGTAGCAGACTCAAG+AGG | - | chr1.2:4569652-4569671 | None:intergenic | 50.0% | |
CAGGGCAAGAACAACCCATT+GGG | + | chr1.2:4570638-4570657 | MS.gene044078:intron | 50.0% | |
CGCAGTCTTACCCAGTTTCT+TGG | + | chr1.2:4567257-4567276 | MS.gene044078:intron | 50.0% | |
CGTTAGTTAGATCCGCGAAC+CGG | - | chr1.2:4566405-4566424 | None:intergenic | 50.0% | |
GAAATTCATGGGGTGGTAGC+TGG | + | chr1.2:4569383-4569402 | MS.gene044078:CDS | 50.0% | |
GGCAATTTATCACCGACACG+TGG | - | chr1.2:4566517-4566536 | None:intergenic | 50.0% | |
GGCTAGTGAAACTGTGAAGG+TGG | - | chr1.2:4566158-4566177 | None:intergenic | 50.0% | |
GTTAGTTAGATCCGCGAACC+GGG | - | chr1.2:4566404-4566423 | None:intergenic | 50.0% | |
TAGCTGTCACAGACAGATGG+TGG | - | chr1.2:4569553-4569572 | None:intergenic | 50.0% | |
TCAAGCAGAGCAGGAAAGTG+TGG | + | chr1.2:4569445-4569464 | MS.gene044078:CDS | 50.0% | |
TCAGCAATCGCAGCTGTTGA+AGG | + | chr1.2:4568172-4568191 | MS.gene044078:CDS | 50.0% | |
TGTGGAACAGCACTAGACCA+TGG | + | chr1.2:4569307-4569326 | MS.gene044078:CDS | 50.0% | |
! | CAGACAGATGGTGGCTTGAT+AGG | - | chr1.2:4569544-4569563 | None:intergenic | 50.0% |
! | GATGGTGGCTTGATAGGTGA+AGG | - | chr1.2:4569538-4569557 | None:intergenic | 50.0% |
! | GGTGTTGCAGCTGTTGGATA+CGG | + | chr1.2:4569328-4569347 | MS.gene044078:CDS | 50.0% |
!! | AGGAAGGAAGGTGCTGTTGT+TGG | + | chr1.2:4566553-4566572 | MS.gene044078:CDS | 50.0% |
!! | TGGTGGCATTGACTCTGAAG+AGG | + | chr1.2:4568324-4568343 | MS.gene044078:CDS | 50.0% |
ACCGCCTCCTTCAACAGCAA+CGG | - | chr1.2:4568624-4568643 | None:intergenic | 55.0% | |
CCTTCAACAGCAACGGCGAT+AGG | - | chr1.2:4568617-4568636 | None:intergenic | 55.0% | |
CTTCCCGGACCCTACTTATG+CGG | - | chr1.2:4567210-4567229 | None:intergenic | 55.0% | |
GCATAAGTAGGGTCCGGGAA+GGG | + | chr1.2:4567209-4567228 | MS.gene044078:intron | 55.0% | |
GGTGGCTTGATAGGTGAAGG+TGG | - | chr1.2:4569535-4569554 | None:intergenic | 55.0% | |
TGCTGTTGAAGGAGGCGGTA+GGG | + | chr1.2:4568625-4568644 | MS.gene044078:CDS | 55.0% | |
TTACCACCAAAGGCCCAGTG+AGG | - | chr1.2:4570695-4570714 | None:intergenic | 55.0% | |
TTCCCGGACCCTACTTATGC+GGG | - | chr1.2:4567209-4567228 | None:intergenic | 55.0% | |
! | ATCGCCGTTGCTGTTGAAGG+AGG | + | chr1.2:4568617-4568636 | MS.gene044078:CDS | 55.0% |
! | ATTAGGGTTGACCCGGTTCG+CGG | + | chr1.2:4566390-4566409 | MS.gene044078:CDS | 55.0% |
! | CCTATCGCCGTTGCTGTTGA+AGG | + | chr1.2:4568614-4568633 | MS.gene044078:CDS | 55.0% |
! | TTGCTGTTGAAGGAGGCGGT+AGG | + | chr1.2:4568624-4568643 | MS.gene044078:CDS | 55.0% |
!! | GACCATGGTGTTGCAGCTGT+TGG | + | chr1.2:4569322-4569341 | MS.gene044078:CDS | 55.0% |
!! | GTCTGGGTGGGTTTTGTCGT+AGG | - | chr1.2:4566200-4566219 | None:intergenic | 55.0% |
!! | GTGAAGGTGGTGATGGTCCA+GGG | - | chr1.2:4569522-4569541 | None:intergenic | 55.0% |
!! | GTGGTGATGGTCCAGGGTTA+GGG | - | chr1.2:4569516-4569535 | None:intergenic | 55.0% |
!! | TGGTGATGGTCCAGGGTTAG+GGG | - | chr1.2:4569515-4569534 | None:intergenic | 55.0% |
AAGCCTCACTGGGCCTTTGG+TGG | + | chr1.2:4570689-4570708 | MS.gene044078:CDS | 60.0% | |
ACCAAAGGCCCAGTGAGGCT+TGG | - | chr1.2:4570690-4570709 | None:intergenic | 60.0% | |
CAACAGCAACGGCGATAGGC+TGG | - | chr1.2:4568613-4568632 | None:intergenic | 60.0% | |
CACTCCTGCCAAGCCTCACT+GGG | + | chr1.2:4570679-4570698 | MS.gene044078:CDS | 60.0% | |
CCAGCACGAGTGTCACAGAC+AGG | - | chr1.2:4569709-4569728 | None:intergenic | 60.0% | |
CCTGTCTGTGACACTCGTGC+TGG | + | chr1.2:4569706-4569725 | MS.gene044078:CDS | 60.0% | |
CGCATAAGTAGGGTCCGGGA+AGG | + | chr1.2:4567208-4567227 | MS.gene044078:intron | 60.0% | |
CTCCCCGCATAAGTAGGGTC+CGG | + | chr1.2:4567203-4567222 | MS.gene044078:intron | 60.0% | |
GTGATGGTCCAGGGTTAGGG+GGG | - | chr1.2:4569513-4569532 | None:intergenic | 60.0% | |
TCCCCGCATAAGTAGGGTCC+GGG | + | chr1.2:4567204-4567223 | MS.gene044078:intron | 60.0% | |
TCCCGGACCCTACTTATGCG+GGG | - | chr1.2:4567208-4567227 | None:intergenic | 60.0% | |
! | GCCGTTGCTGTTGAAGGAGG+CGG | + | chr1.2:4568620-4568639 | MS.gene044078:CDS | 60.0% |
! | GGTGATGGTCCAGGGTTAGG+GGG | - | chr1.2:4569514-4569533 | None:intergenic | 60.0% |
!! | GGTGAAGGTGGTGATGGTCC+AGG | - | chr1.2:4569523-4569542 | None:intergenic | 60.0% |
!! | GGTGGTGATGGTCCAGGGTT+AGG | - | chr1.2:4569517-4569536 | None:intergenic | 60.0% |
!! | TGCGGGGAGTTTTAGTGCGC+AGG | - | chr1.2:4567192-4567211 | None:intergenic | 60.0% |
AAGGCCCAGTGAGGCTTGGC+AGG | - | chr1.2:4570686-4570705 | None:intergenic | 65.0% | |
GCACTCCTGCCAAGCCTCAC+TGG | + | chr1.2:4570678-4570697 | MS.gene044078:CDS | 65.0% | |
GCCAAGCCTCACTGGGCCTT+TGG | + | chr1.2:4570686-4570705 | MS.gene044078:CDS | 65.0% | |
GGACAGAACCCCCCTAACCC+TGG | + | chr1.2:4569502-4569521 | MS.gene044078:CDS | 65.0% | |
GGTGGTAGCTGGGGCGAACA+AGG | + | chr1.2:4569394-4569413 | MS.gene044078:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 4566115 | 4570736 | 4566115 | ID=MS.gene044078 |
chr1.2 | mRNA | 4566115 | 4570736 | 4566115 | ID=MS.gene044078.t1;Parent=MS.gene044078 |
chr1.2 | exon | 4566115 | 4566598 | 4566115 | ID=MS.gene044078.t1.exon1;Parent=MS.gene044078.t1 |
chr1.2 | CDS | 4566115 | 4566598 | 4566115 | ID=cds.MS.gene044078.t1;Parent=MS.gene044078.t1 |
chr1.2 | exon | 4568155 | 4568390 | 4568155 | ID=MS.gene044078.t1.exon2;Parent=MS.gene044078.t1 |
chr1.2 | CDS | 4568155 | 4568390 | 4568155 | ID=cds.MS.gene044078.t1;Parent=MS.gene044078.t1 |
chr1.2 | exon | 4568527 | 4568667 | 4568527 | ID=MS.gene044078.t1.exon3;Parent=MS.gene044078.t1 |
chr1.2 | CDS | 4568527 | 4568667 | 4568527 | ID=cds.MS.gene044078.t1;Parent=MS.gene044078.t1 |
chr1.2 | exon | 4569289 | 4569741 | 4569289 | ID=MS.gene044078.t1.exon4;Parent=MS.gene044078.t1 |
chr1.2 | CDS | 4569289 | 4569741 | 4569289 | ID=cds.MS.gene044078.t1;Parent=MS.gene044078.t1 |
chr1.2 | exon | 4570641 | 4570736 | 4570641 | ID=MS.gene044078.t1.exon5;Parent=MS.gene044078.t1 |
chr1.2 | CDS | 4570641 | 4570736 | 4570641 | ID=cds.MS.gene044078.t1;Parent=MS.gene044078.t1 |
Gene Sequence |
Protein sequence |