AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42300.t1 MTR_3g112430 96.403 417 13 1 1 415 1 417 0.0 838
MS.gene42300.t1 MTR_1g107550 51.319 417 187 5 12 420 28 436 7.03e-143 416
MS.gene42300.t1 MTR_1g018840 49.061 426 196 7 12 418 23 446 5.85e-136 398
MS.gene42300.t1 MTR_1g018840 49.057 424 195 7 12 416 23 444 4.52e-135 395
MS.gene42300.t1 MTR_3g102220 47.059 442 206 8 2 417 6 445 2.09e-133 392
MS.gene42300.t1 MTR_2g016180 48.037 433 192 8 9 415 19 444 3.80e-124 369
MS.gene42300.t1 MTR_2g016270 47.685 432 180 8 9 415 19 429 1.56e-121 361
MS.gene42300.t1 MTR_4g094918 48.397 343 169 5 9 346 9 348 1.23e-116 345
MS.gene42300.t1 MTR_3g116080 51.335 337 151 5 11 340 18 348 3.34e-113 336
MS.gene42300.t1 MTR_2g075830 48.083 339 155 6 12 339 12 340 8.45e-104 311
MS.gene42300.t1 MTR_4g047610 49.844 321 142 6 28 339 32 342 3.69e-103 310
MS.gene42300.t1 MTR_5g022560 47.661 342 155 7 12 339 12 343 5.58e-103 309
MS.gene42300.t1 MTR_3g075390 46.591 352 174 4 10 349 5 354 6.13e-103 310
MS.gene42300.t1 MTR_4g079770 48.105 343 152 8 12 339 13 344 2.63e-102 308
MS.gene42300.t1 MTR_4g079440 49.351 308 147 5 32 338 44 343 8.67e-102 306
MS.gene42300.t1 MTR_2g090890 47.321 336 162 5 11 340 11 337 2.09e-101 305
MS.gene42300.t1 MTR_4g079470 50.000 314 137 6 35 339 42 344 6.73e-101 304
MS.gene42300.t1 MTR_4g080700 50.654 306 143 4 35 339 41 339 1.22e-100 303
MS.gene42300.t1 MTR_4g079800 49.045 314 140 6 35 339 42 344 5.46e-100 302
MS.gene42300.t1 MTR_4g104370 47.384 344 170 6 12 347 11 351 3.24e-99 300
MS.gene42300.t1 MTR_4g080730 49.673 306 146 3 35 339 41 339 4.99e-99 299
MS.gene42300.t1 MTR_4g107930 46.491 342 159 7 12 339 13 344 1.69e-98 298
MS.gene42300.t1 MTR_2g083930 45.317 331 178 3 11 338 12 342 3.88e-97 295
MS.gene42300.t1 MTR_4g080360 46.471 340 171 5 6 339 7 341 6.26e-97 294
MS.gene42300.t1 MTR_7g079230 43.567 342 163 7 13 339 9 335 3.78e-86 266
MS.gene42300.t1 MTR_7g078600 46.349 315 145 8 31 338 39 336 7.61e-86 265
MS.gene42300.t1 MTR_4g065077 41.783 359 176 10 7 341 9 358 3.75e-80 251
MS.gene42300.t1 MTR_2g015850 46.178 314 159 7 26 338 58 362 3.66e-78 246
MS.gene42300.t1 MTR_2g015920 40.597 335 181 8 21 346 40 365 1.07e-76 243
MS.gene42300.t1 MTR_2g067900 42.988 328 169 10 21 337 3 323 3.65e-74 235
MS.gene42300.t1 MTR_8g086470 40.449 356 169 9 7 341 25 358 1.41e-73 234
MS.gene42300.t1 MTR_2g015930 41.390 331 173 9 21 340 39 359 1.05e-72 232
MS.gene42300.t1 MTR_4g125300 40.061 327 173 10 20 339 38 348 1.11e-67 219
MS.gene42300.t1 MTR_2g064475 35.196 358 184 14 21 339 3 351 4.23e-62 204
MS.gene42300.t1 MTR_4g071060 38.318 321 165 11 34 336 48 353 1.13e-60 201
MS.gene42300.t1 MTR_2g067560 36.812 345 186 11 23 343 5 341 4.43e-58 204
MS.gene42300.t1 MTR_1g023210 36.449 321 172 10 34 336 51 357 1.49e-57 193
MS.gene42300.t1 MTR_2g016380 50.476 210 87 3 222 415 16 224 1.21e-56 187
MS.gene42300.t1 MTR_2g066980 36.170 329 157 11 27 339 27 318 2.23e-55 186
MS.gene42300.t1 MTR_1g094135 35.588 340 176 14 30 345 52 372 4.45e-54 184
MS.gene42300.t1 MTR_1g023810 43.119 218 117 5 123 337 48 261 1.10e-51 174
MS.gene42300.t1 MTR_4g072790 35.922 309 153 11 34 336 48 317 5.03e-47 164
MS.gene42300.t1 MTR_4g073660 36.859 312 150 12 34 336 47 320 7.76e-46 161
MS.gene42300.t1 MTR_4g072340 36.859 312 150 12 34 336 48 321 1.02e-45 161
MS.gene42300.t1 MTR_7g078630 36.879 282 132 7 26 295 698 945 1.88e-42 160
MS.gene42300.t1 MTR_7g078580 59.184 98 38 2 242 338 4 100 1.57e-29 111
MS.gene42300.t1 MTR_2g015840 49.541 109 53 2 232 339 164 271 1.01e-28 114
MS.gene42300.t1 MTR_2g015840 37.600 125 76 1 35 159 34 156 2.25e-22 96.3
MS.gene42300.t1 MTR_1g025450 38.150 173 85 5 123 292 54 207 1.27e-27 115
MS.gene42300.t1 MTR_7g079130 58.889 90 36 1 250 338 7 96 5.25e-27 103
MS.gene42300.t1 MTR_7g078310 31.553 206 120 5 17 219 63 250 2.68e-21 93.2
MS.gene42300.t1 MTR_7g086240 53.333 75 34 1 30 104 30 103 4.71e-20 85.1
MS.gene42300.t1 MTR_3g029560 32.227 211 115 7 135 339 49 237 2.07e-18 84.3
MS.gene42300.t1 MTR_2g047960 43.529 85 48 0 134 218 8 92 7.36e-17 76.3
MS.gene42300.t1 MTR_7g079260 47.500 80 25 2 266 344 7 70 8.10e-15 70.5
MS.gene42300.t1 MTR_8g087510 36.923 130 76 5 165 292 23 148 1.05e-14 72.4
MS.gene42300.t1 MTR_3g082370 26.977 215 119 8 126 315 2 203 5.95e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42300.t1 AT1G09850 69.565 391 109 2 28 415 26 409 0.0 568
MS.gene42300.t1 AT3G19390 51.190 420 188 6 8 420 12 421 3.01e-142 414
MS.gene42300.t1 AT5G43060 49.005 402 189 4 26 417 42 437 1.04e-135 397
MS.gene42300.t1 AT1G47128 45.642 436 209 5 5 417 6 436 1.70e-131 386
MS.gene42300.t1 AT4G35350 53.871 310 139 2 32 341 49 354 3.00e-115 341
MS.gene42300.t1 AT3G19400 52.351 319 133 6 33 342 43 351 3.08e-115 341
MS.gene42300.t1 AT1G20850 53.548 310 141 2 32 341 49 355 1.30e-114 340
MS.gene42300.t1 AT4G36880 52.308 325 146 5 29 345 44 367 1.35e-114 340
MS.gene42300.t1 AT4G23520 50.287 348 153 9 9 342 11 352 4.97e-109 325
MS.gene42300.t1 AT3G48340 47.458 354 170 4 9 348 1 352 1.52e-104 314
MS.gene42300.t1 AT3G48350 47.159 352 176 6 1 345 1 349 2.17e-103 311
MS.gene42300.t1 AT4G11320 48.750 320 150 6 29 342 51 362 4.79e-102 308
MS.gene42300.t1 AT4G11320 48.750 320 150 6 29 342 51 362 4.79e-102 308
MS.gene42300.t1 AT4G11310 48.428 318 154 5 29 342 44 355 7.59e-102 307
MS.gene42300.t1 AT2G27420 45.042 353 157 8 13 338 4 346 1.37e-99 301
MS.gene42300.t1 AT5G50260 45.690 348 179 4 7 346 4 349 2.73e-99 301
MS.gene42300.t1 AT5G45890 44.571 350 173 7 1 339 6 345 1.70e-98 298
MS.gene42300.t1 AT3G49340 46.746 338 164 7 14 338 5 339 1.06e-96 293
MS.gene42300.t1 AT1G06260 49.026 308 149 5 34 340 43 343 1.99e-94 288
MS.gene42300.t1 AT2G34080 40.974 349 181 7 8 339 4 344 1.44e-87 270
MS.gene42300.t1 AT1G29090 41.061 358 185 8 3 339 2 354 3.18e-85 264
MS.gene42300.t1 AT1G29080 42.718 309 170 5 35 339 40 345 1.72e-84 262
MS.gene42300.t1 AT3G43960 44.615 325 166 10 33 350 40 357 2.74e-84 263
MS.gene42300.t1 AT4G35350 51.029 243 114 3 32 274 49 286 1.44e-80 250
MS.gene42300.t1 AT3G19400 51.626 246 100 6 33 269 43 278 1.52e-80 250
MS.gene42300.t1 AT1G29110 38.053 339 192 5 6 339 8 333 1.73e-73 233
MS.gene42300.t1 AT3G48350 45.357 280 144 5 1 274 1 277 1.52e-70 224
MS.gene42300.t1 AT3G45310 41.083 314 161 9 34 339 59 356 4.66e-65 212
MS.gene42300.t1 AT5G60360 39.809 314 165 9 34 339 59 356 5.41e-65 212
MS.gene42300.t1 AT3G45310 40.764 314 161 9 34 339 59 355 8.80e-63 206
MS.gene42300.t1 AT5G60360 39.172 314 166 9 34 339 59 355 1.67e-62 206
MS.gene42300.t1 AT5G60360 40.273 293 155 8 34 318 59 339 7.66e-62 204
MS.gene42300.t1 AT4G39090 37.798 336 174 11 24 341 44 362 7.43e-61 202
MS.gene42300.t1 AT3G54940 37.048 332 178 11 30 342 47 366 5.87e-60 199
MS.gene42300.t1 AT2G21430 38.576 337 172 12 24 342 41 360 7.82e-60 199
MS.gene42300.t1 AT4G16190 36.236 356 186 12 16 345 32 372 1.73e-55 188
MS.gene42300.t1 AT3G54940 35.319 235 139 4 30 256 47 276 7.76e-41 147
MS.gene42300.t1 AT4G01610 28.852 305 173 16 56 331 41 330 8.49e-18 84.7
MS.gene42300.t1 AT4G01610 28.197 305 175 16 56 331 41 330 6.99e-16 79.0
MS.gene42300.t1 AT1G02300 26.577 222 133 9 143 340 146 361 1.90e-11 65.9

Find 113 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACCATGTTCAACTTATT+TGG 0.109517 3.2:-89686534 MS.gene42300:CDS
CCTTGTTGTCAATGATAAAT+TGG 0.219943 3.2:+89687005 None:intergenic
GGAGGTGGGACAGGAGGATT+GGG 0.228778 3.2:+89686332 None:intergenic
CGGAAAACGGAGTAGATTAT+TGG 0.260874 3.2:-89686481 MS.gene42300:CDS
CGAATTGTTGATCTTCAATA+TGG 0.262283 3.2:+89688137 None:intergenic
CTCTAATCATACAGTTAAAA+AGG 0.279655 3.2:-89686789 MS.gene42300:intron
ACATATTCCAAGAAATTTCT+TGG 0.288831 3.2:+89686247 None:intergenic
AGGCGTGTTGTTACGATTGA+TGG 0.304945 3.2:-89686769 MS.gene42300:CDS
TGTTGTGCCAAGAAATTTCT+TGG 0.305181 3.2:-89686254 MS.gene42300:CDS
AGGAGGATTGGGGCTGGTCT+TGG 0.309200 3.2:+89686343 None:intergenic
AAAATTCTTGGGGAAAATCT+TGG 0.324006 3.2:-89686451 MS.gene42300:CDS
CGGAAGAGGAAAAGCATTAC+AGG 0.334307 3.2:-89688324 MS.gene42300:CDS
TGGAGGTGGGACAGGAGGAT+TGG 0.334659 3.2:+89686331 None:intergenic
AAGCTCCTTCTGAGATTGAT+TGG 0.339906 3.2:-89688096 MS.gene42300:CDS
CCGCATATGCCTACGCTAAC+AGG 0.347930 3.2:+89686688 None:intergenic
AAATTCTTGGGGAAAATCTT+GGG 0.360195 3.2:-89686450 MS.gene42300:CDS
GATCAACAATTCGATGATAA+TGG 0.365773 3.2:-89688127 MS.gene42300:CDS
CACCTCCACCAGGTCCTATA+AGG 0.367239 3.2:-89686316 MS.gene42300:CDS
GTAAACAAATTACACCTTAT+AGG 0.367395 3.2:+89686302 None:intergenic
TTCTTGGAATATGTTTCTCT+TGG 0.370661 3.2:-89686238 MS.gene42300:CDS
CATGTTGTTTGCTCCACTCT+TGG 0.376144 3.2:+89688362 None:intergenic
TGTCTCACAACACAATCAAA+TGG 0.386774 3.2:-89688272 MS.gene42300:CDS
GAAGAAAGGGAAACAATTCA+TGG 0.396707 3.2:+89688465 None:intergenic
TAATTTCAGGGTATCTTCAC+TGG 0.406924 3.2:-89686554 MS.gene42300:intron
AGGAAGGAGCCAATGTCTTA+AGG 0.410638 3.2:-89686135 MS.gene42300:intron
GCAGTGTTGATTGTAGGATA+TGG 0.413085 3.2:-89686506 MS.gene42300:CDS
GGACCTGGTGGAGGTGGGAC+AGG 0.431037 3.2:+89686323 None:intergenic
GACGAGTGGTCTTGAATTCA+TGG 0.438570 3.2:+89688200 None:intergenic
CTCCTTCCTGTGTCGCAAAT+CGG 0.440855 3.2:+89686149 None:intergenic
TGCGATAGAACTTATAATAG+TGG 0.441166 3.2:-89687058 MS.gene42300:CDS
GAGCCTTTCTGAACAAGAAC+TGG 0.441747 3.2:-89687086 MS.gene42300:CDS
AACAAGTACCACAGCTTCCT+TGG 0.449023 3.2:+89688041 None:intergenic
GCTCAACCTTTGAGTATAGC+TGG 0.455156 3.2:+89686650 None:intergenic
AACTTCTGCCGTATGTTGTA+AGG 0.456184 3.2:-89686201 MS.gene42300:CDS
GGGATAAATAAAATTGTGAC+AGG 0.462626 3.2:-89687118 MS.gene42300:CDS
GTCTCACAACACAATCAAAT+GGG 0.464045 3.2:-89688271 MS.gene42300:CDS
TGGGACAGGAGGATTGGGGC+TGG 0.464785 3.2:+89686337 None:intergenic
GTTGAGGGAGAGGGTATAAC+TGG 0.464837 3.2:+89688243 None:intergenic
CGAAACACTGACAATTCTGC+CGG 0.467909 3.2:-89686401 MS.gene42300:CDS
GACAATTCTGCCGGGTTATG+TGG 0.469503 3.2:-89686392 MS.gene42300:CDS
CTTATAGGACCTGGTGGAGG+TGG 0.469543 3.2:+89686317 None:intergenic
GGAAAATCTTGGGGAATGAA+TGG 0.472095 3.2:-89686440 MS.gene42300:CDS
AGACAAAAGCATAATTGTCT+TGG 0.473308 3.2:+89688290 None:intergenic
TTGAATCTTAACAACGAAGA+AGG 0.474141 3.2:+89688166 None:intergenic
AAGAATCGTAAAATGAAGAA+AGG 0.479815 3.2:+89688451 None:intergenic
GAATTCAAGACCACTCGTCT+TGG 0.484353 3.2:-89688196 MS.gene42300:CDS
GTAGGATATGGTTCGGAAAA+CGG 0.484771 3.2:-89686494 MS.gene42300:CDS
GACCATGCAGTGTTGATTGT+AGG 0.492425 3.2:-89686512 MS.gene42300:CDS
GTTGATTGTAGGATATGGTT+CGG 0.492801 3.2:-89686501 MS.gene42300:CDS
CCTCCTGTCCCACCTCCACC+AGG 0.493624 3.2:-89686326 MS.gene42300:CDS
CTGCGAAAGCGTTGAGGGAG+AGG 0.496556 3.2:+89688233 None:intergenic
GGATTGGGGCTGGTCTTGGT+TGG 0.499898 3.2:+89686347 None:intergenic
ACATGGCAAAACATACTCTT+CGG 0.504448 3.2:-89688344 MS.gene42300:CDS
GAGGTGGGACAGGAGGATTG+GGG 0.504545 3.2:+89686333 None:intergenic
TATATTATGCAGGTGCTTGT+TGG 0.506019 3.2:-89687168 MS.gene42300:intron
TCTGTCAGGCTAAAACGTGC+AGG 0.506948 3.2:-89685400 MS.gene42300:intron
CTACCAGTTCTTGTTCAGAA+AGG 0.514862 3.2:+89687083 None:intergenic
GAAGAGTTTAGAAGTGTCGT+TGG 0.523076 3.2:+89688384 None:intergenic
AAGATCTGCGAAAGCGTTGA+GGG 0.523858 3.2:+89688228 None:intergenic
TCGGCTACCGGCGCTATCGA+AGG 0.524156 3.2:-89687139 MS.gene42300:CDS
AGTAGTTGACGACTTTGATA+CGG 0.524727 3.2:+89686959 None:intergenic
TTGATACGGGTAATCTTCCT+CGG 0.528900 3.2:+89686973 None:intergenic
AGAATCGTAAAATGAAGAAA+GGG 0.533049 3.2:+89688452 None:intergenic
TGGTTGTGATGGTGGACTCA+TGG 0.533089 3.2:-89687038 MS.gene42300:CDS
GAGTTTAGAAGTGTCGTTGG+AGG 0.544087 3.2:+89688387 None:intergenic
AATTTATCATTGACAACAAG+GGG 0.547366 3.2:-89687003 MS.gene42300:CDS
CAAAACATACTCTTCGGAAG+AGG 0.547389 3.2:-89688338 MS.gene42300:CDS
GGCTTTCCAGCTATACTCAA+AGG 0.552750 3.2:-89686656 MS.gene42300:intron
GATTATCCGATTTGCGACAC+AGG 0.554458 3.2:-89686155 MS.gene42300:CDS
GTAGTTGACGACTTTGATAC+GGG 0.555441 3.2:+89686960 None:intergenic
TAGGCATATGCGGTAGTGCA+AGG 0.556213 3.2:-89686678 MS.gene42300:CDS
CCTGGTGGAGGTGGGACAGG+AGG 0.556666 3.2:+89686326 None:intergenic
AATTCTTGGGGAAAATCTTG+GGG 0.568100 3.2:-89686449 MS.gene42300:CDS
CCAATTTATCATTGACAACA+AGG 0.568474 3.2:-89687005 MS.gene42300:CDS
ACGCTTATCCTTACAACATA+CGG 0.573675 3.2:+89686193 None:intergenic
CGGCTACCGGCGCTATCGAA+GGG 0.573864 3.2:-89687138 MS.gene42300:CDS
TGTTTACTTACTGTTCAAGA+GGG 0.575277 3.2:-89686286 MS.gene42300:CDS
TTTCTCCAATCAATCTCAGA+AGG 0.577692 3.2:+89688091 None:intergenic
TTGTTTACTTACTGTTCAAG+AGG 0.582368 3.2:-89686287 MS.gene42300:CDS
CATGTTGATTCCACATAACC+CGG 0.585499 3.2:+89686382 None:intergenic
ATCCGATTTGCGACACAGGA+AGG 0.586995 3.2:-89686151 MS.gene42300:CDS
TATAATAGTGGTTGTGATGG+TGG 0.587393 3.2:-89687046 MS.gene42300:CDS
CCTGTTAGCGTAGGCATATG+CGG 0.590888 3.2:-89686688 MS.gene42300:CDS
CTTCTAAACTCTTCCAAGAG+TGG 0.597993 3.2:-89688375 MS.gene42300:CDS
TGCGAAAGCGTTGAGGGAGA+GGG 0.599343 3.2:+89688234 None:intergenic
TCGTACAAACCTTAAGACAT+TGG 0.602539 3.2:+89686126 None:intergenic
CAATTTATCATTGACAACAA+GGG 0.603160 3.2:-89687004 MS.gene42300:CDS
ATCCTACAATCAACACTGCA+TGG 0.609724 3.2:+89686510 None:intergenic
TAAGATCTGCGAAAGCGTTG+AGG 0.611274 3.2:+89688227 None:intergenic
CTGTCAGGCTAAAACGTGCA+GGG 0.613480 3.2:-89685399 MS.gene42300:intron
CAAGAGTGGAGCAAACAACA+TGG 0.613878 3.2:-89688361 MS.gene42300:CDS
GAAACACTGACAATTCTGCC+GGG 0.614611 3.2:-89686400 MS.gene42300:CDS
TTATAGGACCTGGTGGAGGT+GGG 0.616742 3.2:+89686318 None:intergenic
GTCAAAGACCAAGGAAGCTG+TGG 0.619485 3.2:-89688049 MS.gene42300:intron
GCAGTCCAACCTGTTAGCGT+AGG 0.624437 3.2:-89686697 MS.gene42300:CDS
AGGCATATGCGGTAGTGCAA+GGG 0.627713 3.2:-89686677 MS.gene42300:CDS
CACCTTATAGGACCTGGTGG+AGG 0.632080 3.2:+89686314 None:intergenic
ATTTATCCCTTCGATAGCGC+CGG 0.633443 3.2:+89687132 None:intergenic
AGTGGTCTTGAATTCATGGT+GGG 0.644824 3.2:+89688204 None:intergenic
AAATTACACCTTATAGGACC+TGG 0.645003 3.2:+89686308 None:intergenic
ACTTATAATAGTGGTTGTGA+TGG 0.645070 3.2:-89687049 MS.gene42300:CDS
GTTTACTTACTGTTCAAGAG+GGG 0.646992 3.2:-89686285 MS.gene42300:CDS
AGGTGAAAAGCCAAGACGAG+TGG 0.648629 3.2:+89688186 None:intergenic
GAGATTGATTGGAGAAAGAG+TGG 0.655370 3.2:-89688085 MS.gene42300:CDS
TGTTTCTCTTGGAAATGCTG+TGG 0.659910 3.2:-89686227 MS.gene42300:CDS
GTTACTTCTGTCAAAGACCA+AGG 0.660559 3.2:-89688058 MS.gene42300:CDS
TCGCAAATCGGATAATCTAG+AGG 0.660600 3.2:+89686161 None:intergenic
TGGTCCAAATAAGTTGAACA+TGG 0.672306 3.2:+89686530 None:intergenic
TTACACCTTATAGGACCTGG+TGG 0.678738 3.2:+89686311 None:intergenic
ATATGCCTACGCTAACAGGT+TGG 0.685295 3.2:+89686692 None:intergenic
GAGTGGTCTTGAATTCATGG+TGG 0.700858 3.2:+89688203 None:intergenic
GGATAAATAAAATTGTGACA+GGG 0.732911 3.2:-89687117 MS.gene42300:CDS
CAACAAGGGGATTGACACCG+AGG 0.745272 3.2:-89686990 MS.gene42300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAATTATA+AGG - chr3.2:89686022-89686041 MS.gene42300:intron 0.0%
!! TAATATACATAGAATATTAT+TGG + chr3.2:89686676-89686695 None:intergenic 10.0%
!! TTAATAATCAAATTTGAAAA+GGG - chr3.2:89685905-89685924 MS.gene42300:intron 10.0%
!! GTTAATAATCAAATTTGAAA+AGG - chr3.2:89685904-89685923 MS.gene42300:intron 15.0%
!! TTTATAAAGATGTTAAATGA+GGG - chr3.2:89686314-89686333 MS.gene42300:CDS 15.0%
!!! TTCTTCTTATTTTAATTTCA+GGG - chr3.2:89687291-89687310 MS.gene42300:intron 15.0%
!! ACTACTAATACAAACTATAA+TGG + chr3.2:89686189-89686208 None:intergenic 20.0%
!! ATAGATTGATGTTTAATACT+TGG - chr3.2:89686068-89686087 MS.gene42300:intron 20.0%
!! ATATTCTATGTATATTATGC+AGG - chr3.2:89686679-89686698 MS.gene42300:CDS 20.0%
!! ATTGGATTGTAAAAAATTCT+TGG - chr3.2:89687394-89687413 MS.gene42300:intron 20.0%
!! GTTTATAAAGATGTTAAATG+AGG - chr3.2:89686313-89686332 MS.gene42300:CDS 20.0%
!! TAGATTGATGTTTAATACTT+GGG - chr3.2:89686069-89686088 MS.gene42300:intron 20.0%
!! TTCAACTACAATAAGTATTT+AGG - chr3.2:89686256-89686275 MS.gene42300:CDS 20.0%
!! TTGGATTGTAAAAAATTCTT+GGG - chr3.2:89687395-89687414 MS.gene42300:intron 20.0%
!!! GTTCTTCTTATTTTAATTTC+AGG - chr3.2:89687290-89687309 MS.gene42300:intron 20.0%
! AAGAATCGTAAAATGAAGAA+AGG + chr3.2:89685409-89685428 None:intergenic 25.0%
! AATTTATCATTGACAACAAG+GGG - chr3.2:89686854-89686873 MS.gene42300:intron 25.0%
! ACATATTCCAAGAAATTTCT+TGG + chr3.2:89687613-89687632 None:intergenic 25.0%
! AGAATCGTAAAATGAAGAAA+GGG + chr3.2:89685408-89685427 None:intergenic 25.0%
! AGATTGATGTTTAATACTTG+GGG - chr3.2:89686070-89686089 MS.gene42300:intron 25.0%
! ATAATCAAATTTGAAAAGGG+TGG - chr3.2:89685908-89685927 MS.gene42300:intron 25.0%
! ATGGTCAATATTAGTAACAT+AGG - chr3.2:89687233-89687252 MS.gene42300:intron 25.0%
! CAATTTATCATTGACAACAA+GGG - chr3.2:89686853-89686872 MS.gene42300:intron 25.0%
! CTATACTCATCATAAGTAAA+TGG - chr3.2:89687766-89687785 MS.gene42300:intron 25.0%
! CTCTAATCATACAGTTAAAA+AGG - chr3.2:89687068-89687087 MS.gene42300:CDS 25.0%
! CTTCAGTTTAACTAAAATCA+TGG + chr3.2:89688424-89688443 None:intergenic 25.0%
! GGATAAATAAAATTGTGACA+GGG - chr3.2:89686740-89686759 MS.gene42300:CDS 25.0%
! GGTAACTTACTTCTTAAATT+AGG - chr3.2:89688392-89688411 MS.gene42300:CDS 25.0%
! GTAAACAAATTACACCTTAT+AGG + chr3.2:89687558-89687577 None:intergenic 25.0%
! GTATTAGTAGTAGATATTTG+AGG - chr3.2:89686198-89686217 MS.gene42300:CDS 25.0%
! TAATCAAATTTGAAAAGGGT+GGG - chr3.2:89685909-89685928 MS.gene42300:intron 25.0%
! TACTTATGATGAGTATAGAA+AGG + chr3.2:89687764-89687783 None:intergenic 25.0%
! TCATAGTATGTGATATTGAT+AGG - chr3.2:89688236-89688255 MS.gene42300:CDS 25.0%
! TGGATTGTAAAAAATTCTTG+GGG - chr3.2:89687396-89687415 MS.gene42300:intron 25.0%
! TTAAATGAACAACTATAAGC+TGG - chr3.2:89687942-89687961 MS.gene42300:intron 25.0%
! TTGTCAATGTTGTTAAATAG+AGG - chr3.2:89687818-89687837 MS.gene42300:intron 25.0%
!! AACAATTTCTTTTGCATTAG+AGG + chr3.2:89686110-89686129 None:intergenic 25.0%
!!! ATGGAAAGTATCTTCTTTAT+CGG + chr3.2:89688059-89688078 None:intergenic 25.0%
!!! TCTATTTCTAGCATTCAAAT+AGG - chr3.2:89688196-89688215 MS.gene42300:CDS 25.0%
!!! TGCTTTATTTCTTTAAGCAT+TGG - chr3.2:89686615-89686634 MS.gene42300:intron 25.0%
AAAATTCTTGGGGAAAATCT+TGG - chr3.2:89687406-89687425 MS.gene42300:intron 30.0%
AAATTCTTGGGGAAAATCTT+GGG - chr3.2:89687407-89687426 MS.gene42300:intron 30.0%
AACTTTCAGAGAATTGCAAA+TGG - chr3.2:89688016-89688035 MS.gene42300:intron 30.0%
ACTACTTTGCAAAAAAGACA+AGG - chr3.2:89686915-89686934 MS.gene42300:intron 30.0%
ACTCTGCTAATAAAACAATG+AGG + chr3.2:89688332-89688351 None:intergenic 30.0%
ACTTATAATAGTGGTTGTGA+TGG - chr3.2:89686808-89686827 MS.gene42300:intron 30.0%
ACTTTCAGAGAATTGCAAAT+GGG - chr3.2:89688017-89688036 MS.gene42300:intron 30.0%
ATCTGAATGTAATACTAGAG+AGG - chr3.2:89688278-89688297 MS.gene42300:CDS 30.0%
CCAATTTATCATTGACAACA+AGG - chr3.2:89686852-89686871 MS.gene42300:intron 30.0%
CGAATTGTTGATCTTCAATA+TGG + chr3.2:89685723-89685742 None:intergenic 30.0%
GATCAACAATTCGATGATAA+TGG - chr3.2:89685730-89685749 MS.gene42300:intron 30.0%
GATTGATGTTTAATACTTGG+GGG - chr3.2:89686071-89686090 MS.gene42300:intron 30.0%
GGGATAAATAAAATTGTGAC+AGG - chr3.2:89686739-89686758 MS.gene42300:CDS 30.0%
GGTCCAATATTGAACAAATT+GGG - chr3.2:89687787-89687806 MS.gene42300:intron 30.0%
GTATGTGATATTGATAGGTT+TGG - chr3.2:89688241-89688260 MS.gene42300:CDS 30.0%
TAAATCATAGCTTCTCTCAT+AGG + chr3.2:89686566-89686585 None:intergenic 30.0%
TAACTGTATGATTAGAGATG+AGG + chr3.2:89687065-89687084 None:intergenic 30.0%
TGACGAGAAAAAACTACTAA+AGG - chr3.2:89687132-89687151 MS.gene42300:CDS 30.0%
TGCGATAGAACTTATAATAG+TGG - chr3.2:89686799-89686818 MS.gene42300:intron 30.0%
TGCTGTCAAAATATCATTTC+TGG + chr3.2:89686371-89686390 None:intergenic 30.0%
TGGTCCAATATTGAACAAAT+TGG - chr3.2:89687786-89687805 MS.gene42300:intron 30.0%
TGTTTACTTACTGTTCAAGA+GGG - chr3.2:89687571-89687590 MS.gene42300:intron 30.0%
TTATGATGAGTATAGAAAGG+AGG + chr3.2:89687761-89687780 None:intergenic 30.0%
TTATGTTAATCAGACAGCTT+GGG - chr3.2:89685951-89685970 MS.gene42300:intron 30.0%
TTCTTGGAATATGTTTCTCT+TGG - chr3.2:89687619-89687638 MS.gene42300:intron 30.0%
TTGAATCTTAACAACGAAGA+AGG + chr3.2:89685694-89685713 None:intergenic 30.0%
TTGTTTACTTACTGTTCAAG+AGG - chr3.2:89687570-89687589 MS.gene42300:intron 30.0%
TTTATGTTAATCAGACAGCT+TGG - chr3.2:89685950-89685969 MS.gene42300:intron 30.0%
! AAAGTATCTTCTTTATCGGA+TGG + chr3.2:89688055-89688074 None:intergenic 30.0%
! AGACAAAAGCATAATTGTCT+TGG + chr3.2:89685570-89685589 None:intergenic 30.0%
! CCTTGTTGTCAATGATAAAT+TGG + chr3.2:89686855-89686874 None:intergenic 30.0%
! TCACCCAATTTGTTCAATAT+TGG + chr3.2:89687793-89687812 None:intergenic 30.0%
! TGAACAATAGCCATTGTTTT+GGG - chr3.2:89687856-89687875 MS.gene42300:intron 30.0%
! TGAGTCTCAGAAAATTTTTG+TGG - chr3.2:89688371-89688390 MS.gene42300:CDS 30.0%
! TTGAACAATAGCCATTGTTT+TGG - chr3.2:89687855-89687874 MS.gene42300:intron 30.0%
!! GTGTTGGGTGTATTTTTATA+TGG - chr3.2:89686473-89686492 MS.gene42300:CDS 30.0%
!!! AGTAGTTTTTTCTCGTCATT+TGG + chr3.2:89687130-89687149 None:intergenic 30.0%
AAATTACACCTTATAGGACC+TGG + chr3.2:89687552-89687571 None:intergenic 35.0%
AAGATACTTTCCATCAGACA+AGG - chr3.2:89688065-89688084 MS.gene42300:CDS 35.0%
AATAGCGTATCCCAAAACAA+TGG + chr3.2:89687869-89687888 None:intergenic 35.0%
AATTCTTGGGGAAAATCTTG+GGG - chr3.2:89687408-89687427 MS.gene42300:intron 35.0%
ACATGGCAAAACATACTCTT+CGG - chr3.2:89685513-89685532 MS.gene42300:intron 35.0%
ACGCTTATCCTTACAACATA+CGG + chr3.2:89687667-89687686 None:intergenic 35.0%
ACTGCATCATTATACACTGT+CGG + chr3.2:89686404-89686423 None:intergenic 35.0%
AGATACTTTCCATCAGACAA+GGG - chr3.2:89688066-89688085 MS.gene42300:CDS 35.0%
AGTAGTTGACGACTTTGATA+CGG + chr3.2:89686901-89686920 None:intergenic 35.0%
AGTGCAAACTGAATAGCAAT+CGG + chr3.2:89688159-89688178 None:intergenic 35.0%
GCATTCAAATAGGATACGAA+AGG - chr3.2:89688206-89688225 MS.gene42300:CDS 35.0%
GTAGTTGAAAAGCTTCCATA+GGG + chr3.2:89686245-89686264 None:intergenic 35.0%
GTCTCACAACACAATCAAAT+GGG - chr3.2:89685586-89685605 MS.gene42300:intron 35.0%
GTTGATTGTAGGATATGGTT+CGG - chr3.2:89687356-89687375 MS.gene42300:intron 35.0%
GTTTACTTACTGTTCAAGAG+GGG - chr3.2:89687572-89687591 MS.gene42300:intron 35.0%
TATAATAGTGGTTGTGATGG+TGG - chr3.2:89686811-89686830 MS.gene42300:intron 35.0%
TATATTATGCAGGTGCTTGT+TGG - chr3.2:89686689-89686708 MS.gene42300:CDS 35.0%
TCGTACAAACCTTAAGACAT+TGG + chr3.2:89687734-89687753 None:intergenic 35.0%
TGCAAATTCGCAACAGTAAT+TGG + chr3.2:89687263-89687282 None:intergenic 35.0%
TGGACCATGTTCAACTTATT+TGG - chr3.2:89687323-89687342 MS.gene42300:intron 35.0%
TGTAGTTGAAAAGCTTCCAT+AGG + chr3.2:89686246-89686265 None:intergenic 35.0%
TGTCTCACAACACAATCAAA+TGG - chr3.2:89685585-89685604 MS.gene42300:intron 35.0%
TGTTGTGCCAAGAAATTTCT+TGG - chr3.2:89687603-89687622 MS.gene42300:intron 35.0%
TTAGATAAGCTTCTACCCTA+TGG - chr3.2:89686227-89686246 MS.gene42300:CDS 35.0%
TTTCTCCAATCAATCTCAGA+AGG + chr3.2:89685769-89685788 None:intergenic 35.0%
! AAACAAGCCTTTTCATCATG+AGG + chr3.2:89686287-89686306 None:intergenic 35.0%
! CATGATGAAAAGGCTTGTTT+AGG - chr3.2:89686287-89686306 MS.gene42300:CDS 35.0%
! GAAATTTTTGCTTCTCTGTC+AGG - chr3.2:89688443-89688462 MS.gene42300:CDS 35.0%
! GGTTTTACCTCATGATGAAA+AGG - chr3.2:89686277-89686296 MS.gene42300:CDS 35.0%
! TAATTTCAGGGTATCTTCAC+TGG - chr3.2:89687303-89687322 MS.gene42300:intron 35.0%
! TGGTCCAAATAAGTTGAACA+TGG + chr3.2:89687330-89687349 None:intergenic 35.0%
! TTTTTCTCGCTATCCTAGTT+AGG - chr3.2:89686441-89686460 MS.gene42300:CDS 35.0%
!!! AGTTTTTTCTCGTCATTTGG+AGG + chr3.2:89687127-89687146 None:intergenic 35.0%
AACTTCTGCCGTATGTTGTA+AGG - chr3.2:89687656-89687675 MS.gene42300:intron 40.0%
AAGCTGGATTATCATGTTGC+TGG - chr3.2:89687958-89687977 MS.gene42300:intron 40.0%
AATGCCATAGCACTGTTTCA+TGG - chr3.2:89687913-89687932 MS.gene42300:intron 40.0%
ACAGCTTGGGTTATGTGAAT+TGG - chr3.2:89685964-89685983 MS.gene42300:intron 40.0%
ATCCTACAATCAACACTGCA+TGG + chr3.2:89687350-89687369 None:intergenic 40.0%
ATGGTGTACACATACAGTGT+CGG - chr3.2:89686492-89686511 MS.gene42300:CDS 40.0%
CAAAACATACTCTTCGGAAG+AGG - chr3.2:89685519-89685538 MS.gene42300:intron 40.0%
CAAACTGAATAGCAATCGGA+AGG + chr3.2:89688155-89688174 None:intergenic 40.0%
CAATCGGAAGGATTCAACTA+CGG + chr3.2:89688143-89688162 None:intergenic 40.0%
CAGCTTGGGTTATGTGAATT+GGG - chr3.2:89685965-89685984 MS.gene42300:intron 40.0%
CGGAAAACGGAGTAGATTAT+TGG - chr3.2:89687376-89687395 MS.gene42300:intron 40.0%
CTACCAGTTCTTGTTCAGAA+AGG + chr3.2:89686777-89686796 None:intergenic 40.0%
CTTCTAAACTCTTCCAAGAG+TGG - chr3.2:89685482-89685501 MS.gene42300:intron 40.0%
GAGATTGATTGGAGAAAGAG+TGG - chr3.2:89685772-89685791 MS.gene42300:intron 40.0%
GGAAAATCTTGGGGAATGAA+TGG - chr3.2:89687417-89687436 MS.gene42300:intron 40.0%
GGAGCTTATGAGAAAATGTG+AGG - chr3.2:89686335-89686354 MS.gene42300:CDS 40.0%
GTAGTTGACGACTTTGATAC+GGG + chr3.2:89686900-89686919 None:intergenic 40.0%
GTTACTTCTGTCAAAGACCA+AGG - chr3.2:89685799-89685818 MS.gene42300:intron 40.0%
TAATACTTGGGGGACATAGA+AGG - chr3.2:89686081-89686100 MS.gene42300:intron 40.0%
TACTCAAAGGTTGAGCTCAA+TGG - chr3.2:89687214-89687233 MS.gene42300:intron 40.0%
TCGCAAATCGGATAATCTAG+AGG + chr3.2:89687699-89687718 None:intergenic 40.0%
TGTTTCTCTTGGAAATGCTG+TGG - chr3.2:89687630-89687649 MS.gene42300:intron 40.0%
TTGATACGGGTAATCTTCCT+CGG + chr3.2:89686887-89686906 None:intergenic 40.0%
TTGGGTTATGTGAATTGGGA+TGG - chr3.2:89685969-89685988 MS.gene42300:intron 40.0%
! AGTGCTATGGCATTGCTATT+TGG + chr3.2:89687907-89687926 None:intergenic 40.0%
! AGTGGTCTTGAATTCATGGT+GGG + chr3.2:89685656-89685675 None:intergenic 40.0%
! CATAGGTTGAGAACAAGTTG+AGG + chr3.2:89686549-89686568 None:intergenic 40.0%
! GTAGGATATGGTTCGGAAAA+CGG - chr3.2:89687363-89687382 MS.gene42300:intron 40.0%
!! AAGCTCCTTCTGAGATTGAT+TGG - chr3.2:89685761-89685780 MS.gene42300:intron 40.0%
!! AGGTGCTTGTTGGTCATTTT+CGG - chr3.2:89686699-89686718 MS.gene42300:CDS 40.0%
!! CATGTTGATTCCACATAACC+CGG + chr3.2:89687478-89687497 None:intergenic 40.0%
!! GAAGAGTTTAGAAGTGTCGT+TGG + chr3.2:89685476-89685495 None:intergenic 40.0%
!! GCAGTGTTGATTGTAGGATA+TGG - chr3.2:89687351-89687370 MS.gene42300:intron 40.0%
AACAAGTACCACAGCTTCCT+TGG + chr3.2:89685819-89685838 None:intergenic 45.0%
AACTCCAATCCCTTGTCTGA+TGG + chr3.2:89688078-89688097 None:intergenic 45.0%
ACACAATTGCCGACCTAACT+AGG + chr3.2:89686457-89686476 None:intergenic 45.0%
AGGAAGGAGCCAATGTCTTA+AGG - chr3.2:89687722-89687741 MS.gene42300:intron 45.0%
AGTTAGGTCGGCAATTGTGT+TGG - chr3.2:89686457-89686476 MS.gene42300:CDS 45.0%
ATATGCCTACGCTAACAGGT+TGG + chr3.2:89687168-89687187 None:intergenic 45.0%
ATTTATCCCTTCGATAGCGC+CGG + chr3.2:89686728-89686747 None:intergenic 45.0%
CAAGAGTGGAGCAAACAACA+TGG - chr3.2:89685496-89685515 MS.gene42300:intron 45.0%
CGAAACACTGACAATTCTGC+CGG - chr3.2:89687456-89687475 MS.gene42300:intron 45.0%
CTTTCCATCAGACAAGGGAT+TGG - chr3.2:89688071-89688090 MS.gene42300:CDS 45.0%
GAAACACTGACAATTCTGCC+GGG - chr3.2:89687457-89687476 MS.gene42300:intron 45.0%
GAATTCAAGACCACTCGTCT+TGG - chr3.2:89685661-89685680 MS.gene42300:intron 45.0%
GAGCCTTTCTGAACAAGAAC+TGG - chr3.2:89686771-89686790 MS.gene42300:CDS 45.0%
GCTCAACCTTTGAGTATAGC+TGG + chr3.2:89687210-89687229 None:intergenic 45.0%
GGCTTTCCAGCTATACTCAA+AGG - chr3.2:89687201-89687220 MS.gene42300:intron 45.0%
GTTAGGTCGGCAATTGTGTT+GGG - chr3.2:89686458-89686477 MS.gene42300:CDS 45.0%
TCTCGCTATCCTAGTTAGGT+CGG - chr3.2:89686445-89686464 MS.gene42300:CDS 45.0%
TCTGCCATGAAACAGTGCTA+TGG + chr3.2:89687920-89687939 None:intergenic 45.0%
TGGTGTACACATACAGTGTC+GGG - chr3.2:89686493-89686512 MS.gene42300:CDS 45.0%
TTACACCTTATAGGACCTGG+TGG + chr3.2:89687549-89687568 None:intergenic 45.0%
! AGGCGTGTTGTTACGATTGA+TGG - chr3.2:89687088-89687107 MS.gene42300:CDS 45.0%
! CATGTTGTTTGCTCCACTCT+TGG + chr3.2:89685498-89685517 None:intergenic 45.0%
! GACGAGTGGTCTTGAATTCA+TGG + chr3.2:89685660-89685679 None:intergenic 45.0%
! GAGTGGTCTTGAATTCATGG+TGG + chr3.2:89685657-89685676 None:intergenic 45.0%
! GATTATCCGATTTGCGACAC+AGG - chr3.2:89687702-89687721 MS.gene42300:intron 45.0%
!! AAGATCTGCGAAAGCGTTGA+GGG + chr3.2:89685632-89685651 None:intergenic 45.0%
!! CGGAAGAGGAAAAGCATTAC+AGG - chr3.2:89685533-89685552 MS.gene42300:intron 45.0%
!! GACCATGCAGTGTTGATTGT+AGG - chr3.2:89687345-89687364 MS.gene42300:intron 45.0%
!! GAGTTTAGAAGTGTCGTTGG+AGG + chr3.2:89685473-89685492 None:intergenic 45.0%
!! TAAGATCTGCGAAAGCGTTG+AGG + chr3.2:89685633-89685652 None:intergenic 45.0%
!! TGTTGGTCATTTTCGGCTAC+CGG - chr3.2:89686706-89686725 MS.gene42300:CDS 45.0%
!!! TTTTTTTTTTTTATAATCTT+AGG + chr3.2:89686006-89686025 None:intergenic 5.0%
AGGCATATGCGGTAGTGCAA+GGG - chr3.2:89687180-89687199 MS.gene42300:intron 50.0%
AGGTGAAAAGCCAAGACGAG+TGG + chr3.2:89685674-89685693 None:intergenic 50.0%
CCTGTTAGCGTAGGCATATG+CGG - chr3.2:89687169-89687188 MS.gene42300:intron 50.0%
CTCCTTCCTGTGTCGCAAAT+CGG + chr3.2:89687711-89687730 None:intergenic 50.0%
CTGTCAGGCTAAAACGTGCA+GGG - chr3.2:89688458-89688477 MS.gene42300:CDS 50.0%
GACAATTCTGCCGGGTTATG+TGG - chr3.2:89687465-89687484 MS.gene42300:intron 50.0%
GTCAAAGACCAAGGAAGCTG+TGG - chr3.2:89685808-89685827 MS.gene42300:intron 50.0%
TAGGCATATGCGGTAGTGCA+AGG - chr3.2:89687179-89687198 MS.gene42300:intron 50.0%
TCTGTCAGGCTAAAACGTGC+AGG - chr3.2:89688457-89688476 MS.gene42300:CDS 50.0%
TTATAGGACCTGGTGGAGGT+GGG + chr3.2:89687542-89687561 None:intergenic 50.0%
! ATCCGATTTGCGACACAGGA+AGG - chr3.2:89687706-89687725 MS.gene42300:intron 50.0%
! GTTGAGGGAGAGGGTATAAC+TGG + chr3.2:89685617-89685636 None:intergenic 50.0%
!! TGGTTGTGATGGTGGACTCA+TGG - chr3.2:89686819-89686838 MS.gene42300:intron 50.0%
CAACAAGGGGATTGACACCG+AGG - chr3.2:89686867-89686886 MS.gene42300:intron 55.0%
CACCTCCACCAGGTCCTATA+AGG - chr3.2:89687541-89687560 MS.gene42300:intron 55.0%
CACCTTATAGGACCTGGTGG+AGG + chr3.2:89687546-89687565 None:intergenic 55.0%
CCGCATATGCCTACGCTAAC+AGG + chr3.2:89687172-89687191 None:intergenic 55.0%
CTTATAGGACCTGGTGGAGG+TGG + chr3.2:89687543-89687562 None:intergenic 55.0%
GCAGTCCAACCTGTTAGCGT+AGG - chr3.2:89687160-89687179 MS.gene42300:intron 55.0%
!! TGCGAAAGCGTTGAGGGAGA+GGG + chr3.2:89685626-89685645 None:intergenic 55.0%
GAGGTGGGACAGGAGGATTG+GGG + chr3.2:89687527-89687546 None:intergenic 60.0%
GGAGGTGGGACAGGAGGATT+GGG + chr3.2:89687528-89687547 None:intergenic 60.0%
TGGAGGTGGGACAGGAGGAT+TGG + chr3.2:89687529-89687548 None:intergenic 60.0%
!! AGGAGGATTGGGGCTGGTCT+TGG + chr3.2:89687517-89687536 None:intergenic 60.0%
!! CTGCGAAAGCGTTGAGGGAG+AGG + chr3.2:89685627-89685646 None:intergenic 60.0%
!! GGATTGGGGCTGGTCTTGGT+TGG + chr3.2:89687513-89687532 None:intergenic 60.0%
CGGCTACCGGCGCTATCGAA+GGG - chr3.2:89686719-89686738 MS.gene42300:CDS 65.0%
TCGGCTACCGGCGCTATCGA+AGG - chr3.2:89686718-89686737 MS.gene42300:CDS 65.0%
TGGGACAGGAGGATTGGGGC+TGG + chr3.2:89687523-89687542 None:intergenic 65.0%
CCTCCTGTCCCACCTCCACC+AGG - chr3.2:89687531-89687550 MS.gene42300:intron 70.0%
CCTGGTGGAGGTGGGACAGG+AGG + chr3.2:89687534-89687553 None:intergenic 70.0%
GGACCTGGTGGAGGTGGGAC+AGG + chr3.2:89687537-89687556 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 89685394 89688485 89685394 ID=MS.gene42300
chr3.2 mRNA 89685394 89688485 89685394 ID=MS.gene42300.t1;Parent=MS.gene42300
chr3.2 exon 89688050 89688485 89688050 ID=MS.gene42300.t1.exon1;Parent=MS.gene42300.t1
chr3.2 CDS 89688050 89688485 89688050 ID=cds.MS.gene42300.t1;Parent=MS.gene42300.t1
chr3.2 exon 89686943 89687178 89686943 ID=MS.gene42300.t1.exon2;Parent=MS.gene42300.t1
chr3.2 CDS 89686943 89687178 89686943 ID=cds.MS.gene42300.t1;Parent=MS.gene42300.t1
chr3.2 exon 89686657 89686797 89686657 ID=MS.gene42300.t1.exon3;Parent=MS.gene42300.t1
chr3.2 CDS 89686657 89686797 89686657 ID=cds.MS.gene42300.t1;Parent=MS.gene42300.t1
chr3.2 exon 89686136 89686567 89686136 ID=MS.gene42300.t1.exon4;Parent=MS.gene42300.t1
chr3.2 CDS 89686136 89686567 89686136 ID=cds.MS.gene42300.t1;Parent=MS.gene42300.t1
chr3.2 exon 89685394 89685414 89685394 ID=MS.gene42300.t1.exon5;Parent=MS.gene42300.t1
chr3.2 CDS 89685394 89685414 89685394 ID=cds.MS.gene42300.t1;Parent=MS.gene42300.t1
Gene Sequence

>MS.gene42300

ATGAATTGTTTCCCTTTCTTCATTTTACGATTCTTGTCTCTGTTGTTCATTTTGTCTCTTTTATCTTTAGTCTCTGCCTCCAACGACACTTCTAAACTCTTCCAAGAGTGGAGCAAACAACATGGCAAAACATACTCTTCGGAAGAGGAAAAGCATTACAGGTTCAAAGTGTTCCAAGACAATTATGCTTTTGTCTCACAACACAATCAAATGGGAAATTCCAGTTATACCCTCTCCCTCAACGCTTTCGCAGATCTTACCCACCATGAATTCAAGACCACTCGTCTTGGCTTTTCACCTTCTTCGTTGTTAAGATTCAAATTCAACCATATTGAAGATCAACAATTCGATGATAATGGTGTTTTAGAAGCTCCTTCTGAGATTGATTGGAGAAAGAGTGGTGCTGTTACTTCTGTCAAAGACCAAGGAAGCTGTGGTACTTGTTTTTTAATACTACAAAAATTATTCATATTTGAATAGAGATAAAATTGATTTTTCAGTTTTGAATTTGTTAATAATCAAATTTGAAAAGGGTGGGTGTTCTAAAATCTCAACTTTTATGTTAATCAGACAGCTTGGGTTATGTGAATTGGGATGGATTTTTGTGTACCTAAGATTATAAAAAAAAAAAAAAAAAAAAAAATTATAAGGATATTTATTCTTTATATGCATAAATAGATTGATGTTTAATACTTGGGGGACATAGAAGGTAGCCTCTAATGCAAAAGAAATTGTTTTGTAGTACAATTTTGAAAGTACTTTATCTAGACTTAGACTTGTAAACTGTAGTTACCATTATAGTTTGTATTAGTAGTAGATATTTGAGGTCAAGTTTAGATAAGCTTCTACCCTATGGAAGCTTTTCAACTACAATAAGTATTTAGGTTTTACCTCATGATGAAAAGGCTTGTTTAGGTGTGTTTATAAAGATGTTAAATGAGGGAGCTTATGAGAAAATGTGAGGCAAAGTTGATCCAGAAATGATATTTTGACAGCATAAATGTTGTCCGACAGTGTATAATGATGCAGTATTGTGTTTTTTATTGATTTTTCTCGCTATCCTAGTTAGGTCGGCAATTGTGTTGGGTGTATTTTTATATGGTGTACACATACAGTGTCGGGTTTGTGATTTTCAAATAACACTACTCAAGACCTCAACTTGTTCTCAACCTATGAGAGAAGCTATGATTTAGAACGCTCATGATTATTATAAGATCATTTTGCTTTATTTCTTTAAGCATTGGAAAAATTTATTTAAAGTAGCTCTAGATGTATGTCACCAATAATATTCTATGTATATTATGCAGGTGCTTGTTGGTCATTTTCGGCTACCGGCGCTATCGAAGGGATAAATAAAATTGTGACAGGGTCTCTTGTGAGCCTTTCTGAACAAGAACTGGTAGATTGCGATAGAACTTATAATAGTGGTTGTGATGGTGGACTCATGGACTATGCATACCAATTTATCATTGACAACAAGGGGATTGACACCGAGGAAGATTACCCGTATCAAAGTCGTCAACTACTTTGCAAAAAAGACAAGGTATTTGCTTGTTTTTTAAACAATAAATTGAATAAAAATTTTAGTCTGTCAAAATACATATAGATTTCATCATCGTTCACTTTAACTTCATACTCTATTAATTTTGTTGATATTAGTATTCTTTTCCTCATCTCTAATCATACAGTTAAAAAGGCGTGTTGTTACGATTGATGGTTATACTGATGTGCCTCCAAATGACGAGAAAAAACTACTAAAGGCTGTTGCAGTCCAACCTGTTAGCGTAGGCATATGCGGTAGTGCAAGGGCTTTCCAGCTATACTCAAAGGTTGAGCTCAATGGTCAATATTAGTAACATAGGTTCACCAATTACTGTTGCGAATTTGCAATAATATGTTCTTCTTATTTTAATTTCAGGGTATCTTCACTGGACCATGTTCAACTTATTTGGACCATGCAGTGTTGATTGTAGGATATGGTTCGGAAAACGGAGTAGATTATTGGATTGTAAAAAATTCTTGGGGAAAATCTTGGGGAATGAATGGATACATACACATGTTGCGAAACACTGACAATTCTGCCGGGTTATGTGGAATCAACATGTTAGCTTCATATCCAACCAAGACCAGCCCCAATCCTCCTGTCCCACCTCCACCAGGTCCTATAAGGTGTAATTTGTTTACTTACTGTTCAAGAGGGGAAACATGTTGTTGTGCCAAGAAATTTCTTGGAATATGTTTCTCTTGGAAATGCTGTGGTAAAACTTCTGCCGTATGTTGTAAGGATAAGCGTCACTGTTGTCCTCTAGATTATCCGATTTGCGACACAGGAAGGAGCCAATGTCTTAAGGTTTGTACGAATTACCTCCTTTCTATACTCATCATAAGTAAATGGTCCAATATTGAACAAATTGGGTGATAGATTTGTCAATGTTGTTAAATAGAGGCTATAGTAGCGAATTTGAACAATAGCCATTGTTTTGGGATACGCTATTTAGTATAAAATGTTGCCAAATAGCAATGCCATAGCACTGTTTCATGGCAGAATTTAAATGAACAACTATAAGCTGGATTATCATGTTGCTGGCTGCAGTTTATTTATGAATACTGACTTGAGTCTATAACTTTCAGAGAATTGCAAATGGGACGACAACAATGCCATCCGATAAAGAAGATACTTTCCATCAGACAAGGGATTGGAGTTCTCATTGAGTATTTATCATTCACATTACTCATTTAATCATCTCCGTAGTTGAATCCTTCCGATTGCTATTCAGTTTGCACTTTGCATTACTGTGTTATTCTATTTCTAGCATTCAAATAGGATACGAAAGGAAACAAATCATAGTATGTGATATTGATAGGTTTGGAGAATGCTTGTATGATCTGAATGTAATACTAGAGAGGATGCATCTGTGTTTTGAAATGTATTTCTCCTCATTGTTTTATTAGCAGAGTTGTTAAAGCAAGACTGTATTGAGTCTCAGAAAATTTTTGTGGTAACTTACTTCTTAAATTAGGTTAAAACCATGATTTTAGTTAAACTGAAGAAATTTTTGCTTCTCTGTCAGGCTAAAACGTGCAGGGCGTAA
Protein sequence

>MS.gene42300.t1

MNCFPFFILRFLSLLFILSLLSLVSASNDTSKLFQEWSKQHGKTYSSEEEKHYRFKVFQDNYAFVSQHNQMGNSSYTLSLNAFADLTHHEFKTTRLGFSPSSLLRFKFNHIEDQQFDDNGVLEAPSEIDWRKSGAVTSVKDQGSCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRTYNSGCDGGLMDYAYQFIIDNKGIDTEEDYPYQSRQLLCKKDKLKRRVVTIDGYTDVPPNDEKKLLKAVAVQPVSVGICGSARAFQLYSKGIFTGPCSTYLDHAVLIVGYGSENGVDYWIVKNSWGKSWGMNGYIHMLRNTDNSAGLCGINMLASYPTKTSPNPPVPPPPGPIRCNLFTYCSRGETCCCAKKFLGICFSWKCCGKTSAVCCKDKRHCCPLDYPICDTGRSQCLKAKTCRA