AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044821

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044821.t1 MTR_7g027175 98.169 437 8 0 1 437 1 437 0.0 892
MS.gene044821.t1 MTR_3g098980 66.587 419 137 2 20 437 18 434 0.0 585
MS.gene044821.t1 MTR_8g096530 61.449 428 160 3 12 437 4 428 0.0 537
MS.gene044821.t1 MTR_4g007540 34.483 435 266 7 13 435 3 430 1.91e-84 265
MS.gene044821.t1 MTR_2g105330 34.475 438 261 9 13 435 3 429 2.49e-83 263
MS.gene044821.t1 MTR_2g064495 34.247 438 262 9 13 435 3 429 3.64e-82 259
MS.gene044821.t1 MTR_8g075610 34.360 422 263 8 23 435 1 417 1.96e-78 249
MS.gene044821.t1 MTR_5g076700 35.659 387 235 8 20 397 14 395 3.53e-76 245
MS.gene044821.t1 MTR_1g053315 36.203 395 230 14 36 412 41 431 2.22e-75 243
MS.gene044821.t1 MTR_1g081660 34.651 430 254 11 19 431 21 440 2.65e-75 242
MS.gene044821.t1 MTR_7g114470 34.367 387 239 8 19 395 14 395 3.15e-72 234
MS.gene044821.t1 MTR_7g114520 32.639 432 265 10 20 433 15 438 9.22e-72 233
MS.gene044821.t1 MTR_1g040175 33.333 423 264 10 20 429 13 430 1.64e-71 233
MS.gene044821.t1 MTR_1g040215 33.596 381 241 8 23 396 16 391 1.35e-70 230
MS.gene044821.t1 MTR_7g114550 32.376 383 248 5 20 395 14 392 2.19e-67 222
MS.gene044821.t1 MTR_7g084940 30.118 425 280 7 22 435 22 440 4.64e-67 221
MS.gene044821.t1 MTR_7g114490 32.812 384 247 6 19 395 13 392 9.98e-67 221
MS.gene044821.t1 MTR_1g040195 33.681 383 223 8 19 397 12 367 1.06e-65 217
MS.gene044821.t1 MTR_7g114560 31.332 383 252 6 20 395 14 392 5.27e-65 216
MS.gene044821.t1 MTR_3g026950 30.995 442 265 12 24 432 10 444 6.30e-64 213
MS.gene044821.t1 MTR_3g112180 32.483 431 260 13 22 436 18 433 7.02e-64 213
MS.gene044821.t1 MTR_3g049150 31.579 437 271 10 24 435 10 443 3.39e-63 211
MS.gene044821.t1 MTR_1g040320 30.024 423 242 10 20 429 13 394 6.58e-61 204
MS.gene044821.t1 MTR_4g055170 32.143 448 267 15 18 436 14 453 8.97e-61 205
MS.gene044821.t1 MTR_7g056087 30.394 431 282 8 20 435 8 435 2.41e-60 203
MS.gene044821.t1 MTR_7g084910 30.456 417 257 11 22 426 23 418 1.11e-59 201
MS.gene044821.t1 MTR_4g127650 32.506 403 235 9 24 396 18 413 1.35e-58 199
MS.gene044821.t1 MTR_1g040315 32.283 381 211 10 21 396 14 352 1.45e-55 190
MS.gene044821.t1 MTR_3g071320 31.651 436 268 12 20 436 9 433 7.98e-55 188
MS.gene044821.t1 MTR_4g097090 30.025 403 243 9 24 395 17 411 8.84e-49 172
MS.gene044821.t1 MTR_7g086000 30.072 419 241 16 13 391 2 408 4.44e-46 166
MS.gene044821.t1 MTR_3g465990 30.923 401 230 17 23 392 17 401 2.33e-44 161
MS.gene044821.t1 MTR_3g465930 32.250 400 230 15 23 392 17 405 4.83e-44 160
MS.gene044821.t1 MTR_2g015430 28.571 413 276 11 39 437 29 436 9.55e-44 159
MS.gene044821.t1 MTR_0502s0010 36.667 240 140 6 104 338 1 233 6.79e-43 151
MS.gene044821.t1 MTR_3g465910 32.000 400 228 15 23 392 17 402 8.55e-43 158
MS.gene044821.t1 MTR_3g465980 31.421 401 228 19 23 392 17 401 8.98e-43 157
MS.gene044821.t1 MTR_6g053810 31.635 373 229 12 38 392 42 406 1.29e-42 156
MS.gene044821.t1 MTR_7g114510 29.831 295 193 6 149 433 6 296 4.13e-40 146
MS.gene044821.t1 MTR_4g013050 24.661 442 275 11 14 435 3 406 5.83e-40 148
MS.gene044821.t1 MTR_7g085990 28.646 384 232 10 51 396 37 416 1.97e-39 147
MS.gene044821.t1 MTR_7g085930 28.643 398 214 12 51 396 41 420 1.83e-38 145
MS.gene044821.t1 MTR_3g465950 34.091 308 185 11 65 360 65 366 1.89e-38 145
MS.gene044821.t1 MTR_3g465880 27.778 450 285 16 23 436 17 462 2.45e-37 142
MS.gene044821.t1 MTR_7g110610 29.275 386 205 14 23 398 12 339 8.04e-35 133
MS.gene044821.t1 MTR_3g086020 26.866 402 247 15 23 408 12 382 2.65e-34 132
MS.gene044821.t1 MTR_5g090810 28.133 391 239 13 37 393 31 413 6.21e-33 130
MS.gene044821.t1 MTR_5g090830 27.877 391 240 13 37 393 31 413 4.71e-32 127
MS.gene044821.t1 MTR_0042s0190 31.034 232 149 7 169 395 1 226 6.59e-32 123
MS.gene044821.t1 MTR_3g101960 30.159 315 194 10 56 356 56 358 1.35e-29 120
MS.gene044821.t1 MTR_3g101930 27.094 406 251 16 55 432 57 445 1.38e-27 114
MS.gene044821.t1 MTR_4g094828 26.980 404 248 17 58 429 49 437 4.59e-27 113
MS.gene044821.t1 MTR_5g090880 25.355 422 268 15 9 393 4 415 1.54e-26 111
MS.gene044821.t1 MTR_0190s0020 25.707 389 258 10 63 433 58 433 3.87e-26 110
MS.gene044821.t1 MTR_4g094842 26.617 402 257 13 54 429 46 435 4.69e-26 110
MS.gene044821.t1 MTR_3g102020 28.610 367 226 13 14 356 5 359 5.25e-26 110
MS.gene044821.t1 MTR_3g101900 25.686 401 260 13 55 432 53 438 6.19e-26 109
MS.gene044821.t1 MTR_3g101970 29.677 310 188 11 56 356 57 345 1.58e-25 108
MS.gene044821.t1 MTR_3g088420 26.154 390 265 12 63 437 50 431 2.30e-25 107
MS.gene044821.t1 MTR_3g465870 30.990 313 190 12 9 302 2 307 8.59e-25 106
MS.gene044821.t1 MTR_3g049140 32.212 208 125 3 244 435 33 240 9.24e-25 102
MS.gene044821.t1 MTR_4g094835 26.396 394 248 16 61 429 57 433 1.62e-24 105
MS.gene044821.t1 MTR_4g022800 26.154 390 255 14 63 429 50 429 1.75e-24 105
MS.gene044821.t1 MTR_3g450710 25.455 385 240 12 45 394 41 413 1.79e-24 105
MS.gene044821.t1 MTR_4g022670 27.202 386 245 13 68 429 55 428 2.18e-24 105
MS.gene044821.t1 MTR_3g450690 25.915 355 226 11 68 394 72 417 3.66e-24 104
MS.gene044821.t1 MTR_4g022720 25.788 349 229 11 63 392 50 387 3.94e-24 104
MS.gene044821.t1 MTR_7g114420 30.213 235 126 7 169 397 1 203 5.59e-24 100
MS.gene044821.t1 MTR_7g114500 35.971 139 86 2 20 155 14 152 1.09e-23 97.1
MS.gene044821.t1 MTR_4g094838 25.843 356 210 11 61 392 57 382 1.53e-23 102
MS.gene044821.t1 MTR_0042s0230 40.441 136 78 2 19 151 12 147 3.47e-23 95.5
MS.gene044821.t1 MTR_8g079710 26.799 403 245 19 58 429 49 432 5.54e-23 101
MS.gene044821.t1 MTR_4g022290 25.879 398 254 14 58 429 50 432 9.21e-23 100
MS.gene044821.t1 MTR_1g094790 24.598 435 276 15 13 413 1 417 1.17e-22 100
MS.gene044821.t1 MTR_5g026320 25.124 402 259 15 37 415 41 423 1.23e-22 100
MS.gene044821.t1 MTR_8g041770 26.686 341 231 10 63 392 59 391 1.99e-22 99.4
MS.gene044821.t1 MTR_6g045553 26.625 477 284 22 13 437 12 474 2.88e-22 99.4
MS.gene044821.t1 MTR_3g051790 37.705 122 73 2 20 138 17 138 3.82e-22 93.6
MS.gene044821.t1 MTR_7g114960 25.070 359 250 8 12 362 5 352 6.29e-22 98.2
MS.gene044821.t1 MTR_4g094832 27.221 349 221 14 98 429 85 417 1.04e-21 97.1
MS.gene044821.t1 MTR_3g070170 24.796 367 221 11 68 392 66 419 2.89e-21 96.3
MS.gene044821.t1 MTR_7g026860 24.740 384 264 12 63 429 50 425 3.36e-21 95.9
MS.gene044821.t1 MTR_4g022760 28.571 273 177 9 68 327 55 322 4.28e-21 95.1
MS.gene044821.t1 MTR_8g079970 25.122 410 249 16 13 392 1 382 5.18e-21 95.1
MS.gene044821.t1 MTR_5g081960 23.575 386 227 11 67 393 60 436 5.51e-21 95.5
MS.gene044821.t1 MTR_8g467590 23.724 392 263 13 20 392 12 386 6.12e-21 95.1
MS.gene044821.t1 MTR_0042s0190 33.577 137 87 3 262 395 26 161 3.85e-20 89.4
MS.gene044821.t1 MTR_4g022825 26.154 390 243 17 68 429 55 427 4.16e-20 92.4
MS.gene044821.t1 MTR_8g467580 24.079 407 257 13 15 392 3 386 5.32e-19 89.4
MS.gene044821.t1 MTR_5g084870 21.995 441 297 15 13 432 1 415 6.34e-19 89.0
MS.gene044821.t1 MTR_3g102010 24.810 395 253 14 25 390 19 398 1.60e-18 87.8
MS.gene044821.t1 MTR_7g014330 23.864 352 236 10 68 391 62 409 3.93e-18 86.7
MS.gene044821.t1 MTR_7g014160 23.671 414 259 16 67 435 68 469 3.36e-17 84.0
MS.gene044821.t1 MTR_2g089735 22.778 360 238 11 68 392 62 416 5.23e-17 83.2
MS.gene044821.t1 MTR_2g007880 23.202 431 270 17 2 398 4 407 5.79e-17 83.2
MS.gene044821.t1 MTR_7g014200 23.342 407 262 14 68 435 69 464 8.12e-17 82.8
MS.gene044821.t1 MTR_7g014230 24.432 352 234 10 68 391 64 411 1.44e-16 82.0
MS.gene044821.t1 MTR_4g007460 31.159 138 82 3 82 217 1 127 1.53e-16 77.0
MS.gene044821.t1 MTR_5g084900 23.158 380 227 13 68 432 9 338 4.46e-16 79.7
MS.gene044821.t1 MTR_3g035000 26.263 198 115 6 202 397 43 211 4.51e-16 79.0
MS.gene044821.t1 MTR_2g089650 24.650 357 234 10 68 392 65 418 4.79e-16 80.5
MS.gene044821.t1 MTR_7g014250 23.446 354 235 11 68 391 62 409 4.79e-16 80.5
MS.gene044821.t1 MTR_6g015815 24.571 350 231 12 68 391 70 412 2.14e-14 75.5
MS.gene044821.t1 MTR_6g015315 22.654 309 212 10 150 435 144 448 4.80e-14 74.3
MS.gene044821.t1 MTR_7g014610 22.356 416 265 15 67 435 67 471 7.60e-14 73.6
MS.gene044821.t1 MTR_1g011660 23.077 338 209 12 48 359 39 351 1.60e-13 72.4
MS.gene044821.t1 MTR_8g039950 34.906 106 66 2 21 123 14 119 4.55e-13 66.2
MS.gene044821.t1 MTR_6g015320 23.134 268 172 8 150 391 147 406 6.35e-13 70.9
MS.gene044821.t1 MTR_2g089670 21.289 357 241 10 67 391 81 429 9.43e-13 70.1
MS.gene044821.t1 MTR_6g016815 26.360 239 149 9 63 290 64 286 1.54e-12 69.3
MS.gene044821.t1 MTR_7g085960 27.451 153 77 3 261 396 11 146 7.75e-12 64.7
MS.gene044821.t1 MTR_2g045550 28.947 152 97 5 15 165 4 145 8.49e-12 63.2
MS.gene044821.t1 MTR_3g100150 23.629 237 160 7 48 275 46 270 1.01e-11 67.0
MS.gene044821.t1 MTR_8g012750 21.984 373 244 11 67 397 61 428 1.76e-11 66.2
MS.gene044821.t1 MTR_3g049080 36.986 73 44 1 24 94 10 82 4.06e-11 59.3
MS.gene044821.t1 MTR_2g036780 26.627 169 118 4 22 188 19 183 6.55e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044821.t1 AT5G41040 73.210 433 110 4 11 437 25 457 0.0 672
MS.gene044821.t1 AT5G41040 73.210 433 110 4 11 437 9 441 0.0 671
MS.gene044821.t1 AT5G63560 61.045 421 154 4 20 437 13 426 0.0 525
MS.gene044821.t1 AT3G48720 55.609 419 182 3 21 437 14 430 5.12e-177 502
MS.gene044821.t1 AT5G48930 34.174 436 268 7 12 435 2 430 2.82e-81 257
MS.gene044821.t1 AT1G03390 35.747 442 264 14 13 437 19 457 3.63e-77 248
MS.gene044821.t1 AT1G65450 35.797 433 254 12 20 436 22 446 1.16e-76 246
MS.gene044821.t1 AT1G27620 33.724 427 260 9 19 435 12 425 1.71e-73 237
MS.gene044821.t1 AT5G17540 32.376 383 248 7 20 395 13 391 2.19e-63 211
MS.gene044821.t1 AT3G03480 34.465 383 233 10 23 395 26 400 1.19e-61 207
MS.gene044821.t1 AT1G28680 32.028 434 271 12 20 435 13 440 9.38e-57 194
MS.gene044821.t1 AT5G57840 32.316 393 235 8 20 390 7 390 2.38e-56 192
MS.gene044821.t1 AT2G19070 30.941 404 237 10 26 396 14 408 7.55e-56 191
MS.gene044821.t1 AT2G40230 30.324 432 273 11 20 435 9 428 5.72e-53 183
MS.gene044821.t1 AT1G28680 32.277 347 223 8 20 360 13 353 6.45e-50 174
MS.gene044821.t1 AT4G31910 29.953 424 260 13 31 423 26 443 1.51e-47 169
MS.gene044821.t1 AT1G65450 32.292 288 177 7 161 436 1 282 1.12e-44 157
MS.gene044821.t1 AT5G07080 29.773 440 271 17 19 433 17 443 3.88e-44 160
MS.gene044821.t1 AT3G62160 29.923 391 236 12 22 397 11 378 1.91e-41 152
MS.gene044821.t1 AT2G25150 30.543 442 266 14 23 435 20 449 2.09e-40 150
MS.gene044821.t1 AT3G47170 28.348 448 286 13 19 433 15 460 4.13e-40 149
MS.gene044821.t1 AT2G23510 28.442 443 274 16 23 436 20 448 2.42e-36 139
MS.gene044821.t1 AT1G78990 27.295 403 244 14 48 414 46 435 9.07e-34 132
MS.gene044821.t1 AT1G24430 27.578 417 255 17 35 432 27 415 3.00e-30 122
MS.gene044821.t1 AT1G31490 27.877 391 248 15 37 410 29 402 2.69e-29 119
MS.gene044821.t1 AT1G32910 25.068 367 246 11 46 393 44 400 4.91e-29 119
MS.gene044821.t1 AT5G16410 26.823 384 243 15 37 400 61 426 3.60e-27 113
MS.gene044821.t1 AT5G07870 29.073 313 195 9 62 356 66 369 6.00e-27 112
MS.gene044821.t1 AT5G42830 29.191 346 217 10 29 356 22 357 1.25e-26 111
MS.gene044821.t1 AT2G39980 26.455 378 215 11 68 392 62 429 1.97e-26 111
MS.gene044821.t1 AT5G07860 27.832 309 194 8 62 356 66 359 5.98e-24 103
MS.gene044821.t1 AT5G23940 27.586 406 258 14 51 429 43 439 9.46e-24 103
MS.gene044821.t1 AT3G29670 24.112 394 271 12 48 419 42 429 1.34e-23 103
MS.gene044821.t1 AT3G50270 26.463 393 250 17 68 434 62 441 2.72e-23 102
MS.gene044821.t1 AT5G61160 25.352 355 234 12 68 399 64 410 4.82e-23 101
MS.gene044821.t1 AT4G15390 23.394 436 287 15 23 432 15 429 1.05e-22 100
MS.gene044821.t1 AT4G15390 23.394 436 287 15 23 432 15 429 1.05e-22 100
MS.gene044821.t1 AT3G29635 24.289 387 267 11 71 436 70 451 1.35e-22 100
MS.gene044821.t1 AT1G24420 23.836 365 246 10 79 432 76 419 8.79e-22 97.4
MS.gene044821.t1 AT1G24420 23.836 365 246 10 79 432 76 419 8.79e-22 97.4
MS.gene044821.t1 AT3G30280 25.000 428 273 20 23 424 13 418 1.77e-20 93.6
MS.gene044821.t1 AT5G47950 24.190 401 255 17 48 432 42 409 8.04e-20 91.7
MS.gene044821.t1 AT3G50280 22.938 388 268 14 68 434 59 436 1.26e-19 91.3
MS.gene044821.t1 AT5G38130 24.523 367 249 12 71 419 82 438 7.94e-19 89.0
MS.gene044821.t1 AT5G23970 23.399 406 263 11 37 421 24 402 2.29e-18 87.4
MS.gene044821.t1 AT3G29590 25.220 341 223 13 76 392 69 401 5.48e-18 86.3
MS.gene044821.t1 AT5G47980 23.516 438 282 18 23 431 12 425 1.17e-17 85.1
MS.gene044821.t1 AT1G65450 45.455 110 55 4 20 125 22 130 1.31e-17 80.5
MS.gene044821.t1 AT4G15400 24.122 427 289 17 23 433 12 419 7.22e-17 82.8
MS.gene044821.t1 AT5G07850 25.656 343 215 14 20 343 27 348 9.94e-17 82.4
MS.gene044821.t1 AT5G67150 23.243 370 237 13 68 407 61 413 1.27e-16 82.0
MS.gene044821.t1 AT3G29680 22.481 387 276 8 68 435 62 443 3.90e-16 80.5
MS.gene044821.t1 AT3G50300 23.861 373 252 12 68 419 59 420 1.89e-15 78.6
MS.gene044821.t1 AT5G39090 22.133 375 271 11 78 436 75 444 1.84e-13 72.4
MS.gene044821.t1 AT3G50280 22.623 305 216 10 142 434 10 306 2.25e-13 71.2
MS.gene044821.t1 AT1G03495 27.083 288 170 15 68 322 66 346 7.37e-13 70.1
MS.gene044821.t1 AT4G29250 22.378 429 285 17 34 433 33 442 2.38e-12 68.9
MS.gene044821.t1 AT3G50290 25.283 265 182 7 137 389 9 269 1.02e-11 65.5
MS.gene044821.t1 AT1G03940 24.020 408 259 17 68 436 66 461 3.35e-11 65.5
MS.gene044821.t1 AT5G39050 21.725 313 219 6 150 436 152 464 4.41e-11 65.1
MS.gene044821.t1 AT4G13840 24.885 217 139 7 68 275 67 268 7.10e-11 64.3

Find 94 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTTCCCAAAGGGTATTT+TGG 0.104046 7.2:+72315181 MS.gene044821:CDS
GTCTGGACCGGTTTCCTTGC+CGG 0.230469 7.2:+72315447 MS.gene044821:CDS
CTTCAATGTCAGCAAATTCT+TGG 0.238280 7.2:-72314910 None:intergenic
AGAAGCTTTGTTTCTTGTTC+TGG 0.240151 7.2:-72315124 None:intergenic
GAAAATTCTAATTATCAAAA+TGG 0.257291 7.2:+72313390 MS.gene044821:CDS
CCAAGATTTAATGCAGATAT+AGG 0.271308 7.2:+72315561 MS.gene044821:CDS
CATCATTTCATCTTCATATA+AGG 0.279635 7.2:-72314951 None:intergenic
GTTCATTATTACCCTCTTGC+TGG 0.281316 7.2:+72313615 MS.gene044821:CDS
AAATACCCTTTGGGAAGTTT+TGG 0.290579 7.2:-72315178 None:intergenic
CACTGTATGTTTGATGGAAT+TGG 0.294988 7.2:+72314767 MS.gene044821:CDS
CCGTTTCATACCACCGATTT+CGG 0.298332 7.2:+72315406 MS.gene044821:CDS
AATTGTTCAATGGAAGAAAT+TGG 0.299341 7.2:+72313717 MS.gene044821:CDS
CCTTTCTTTGTTTCTTCAGA+TGG 0.304433 7.2:-72313462 None:intergenic
TCTTGACCGAAGCATATTAA+AGG 0.311197 7.2:+72314856 MS.gene044821:CDS
TGAATAACCTTCACCGTATA+CGG 0.313318 7.2:-72315265 None:intergenic
GAACAAGCCCTTTCCGTATA+CGG 0.314033 7.2:+72315252 MS.gene044821:CDS
AACAAGAGCTAGGCCATCTT+TGG 0.319090 7.2:+72315348 MS.gene044821:CDS
CAAGTGTTGGTTCACTTGTT+AGG 0.323483 7.2:-72313434 None:intergenic
TGGTGCAAATGCTCTATCTT+CGG 0.344041 7.2:-72314890 None:intergenic
TCCATTCCCAAAATACCCTT+TGG 0.350876 7.2:-72315188 None:intergenic
AGAAGCATTAATGTGCTTCT+TGG 0.357845 7.2:+72315511 MS.gene044821:CDS
TATTCTTCAGATGCCTCCTT+TGG 0.367285 7.2:+72313806 MS.gene044821:CDS
GGTGCAAATGCTCTATCTTC+GGG 0.375653 7.2:-72314889 None:intergenic
CGATTTCGGTTGGGGAGAAC+CGG 0.379270 7.2:+72315420 MS.gene044821:CDS
GAATGCTTGTGAAGTGATTA+AGG 0.383599 7.2:+72313572 MS.gene044821:CDS
CCTATATCTGCATTAAATCT+TGG 0.386363 7.2:-72315561 None:intergenic
AAGTGCTTTCAGCATTTGTT+TGG 0.399533 7.2:+72315071 MS.gene044821:CDS
TCCTTCTCCGGCAAGGAAAC+CGG 0.400213 7.2:-72315454 None:intergenic
GATGCCTCCTTTGGTTGCTC+AGG 0.401248 7.2:+72313815 MS.gene044821:CDS
TCATACCACCGATTTCGGTT+GGG 0.412037 7.2:+72315411 MS.gene044821:CDS
CGGTTCTCCCCAACCGAAAT+CGG 0.413358 7.2:-72315419 None:intergenic
TGGGGAGAACCGGTTCTGTC+TGG 0.419323 7.2:+72315430 MS.gene044821:CDS
TTCATATAAGGTACTAGTGT+TGG 0.419653 7.2:-72314939 None:intergenic
ATGAATCACTGTATGTTTGA+TGG 0.425031 7.2:+72314761 MS.gene044821:CDS
CCATTCCCAAAATACCCTTT+GGG 0.427070 7.2:-72315187 None:intergenic
TGCGGACCTTTAATATGCTT+CGG 0.427426 7.2:-72314862 None:intergenic
AATATGCTTCGGTCAAGAAC+TGG 0.431411 7.2:-72314851 None:intergenic
AACAAAATCACTTCCTTCTC+CGG 0.435908 7.2:-72315466 None:intergenic
CATACCACCGATTTCGGTTG+GGG 0.437822 7.2:+72315412 MS.gene044821:CDS
TCCAAGGACTCTTGGTATGT+TGG 0.438373 7.2:+72313758 MS.gene044821:CDS
TTCATACCACCGATTTCGGT+TGG 0.441418 7.2:+72315410 MS.gene044821:CDS
TTCATTATTACCCTCTTGCT+GGG 0.443863 7.2:+72313616 MS.gene044821:CDS
TTCTTTGTTTCTTCAGATGG+TGG 0.446811 7.2:-72313459 None:intergenic
AAACCTGATCCAAGGACTCT+TGG 0.464374 7.2:+72313750 MS.gene044821:CDS
ACAAATGCTGTTTGTAAAGC+AGG 0.466739 7.2:+72315220 MS.gene044821:CDS
ATACCAAGAGTCCTTGGATC+AGG 0.478213 7.2:-72313753 None:intergenic
ACCAACATACCAAGAGTCCT+TGG 0.479611 7.2:-72313759 None:intergenic
GGCTGAAGCTAATTGTTCAA+TGG 0.480046 7.2:+72313707 MS.gene044821:CDS
TCAGATGGTGGAACAAGTGT+TGG 0.489688 7.2:-72313447 None:intergenic
ACCGGTTTCCTTGCCGGAGA+AGG 0.494266 7.2:+72315453 MS.gene044821:CDS
CTATGGAGTTTGTTAACTCA+TGG 0.498485 7.2:+72314792 MS.gene044821:CDS
AAAACCTCCACATTTGAACT+TGG 0.504811 7.2:-72314723 None:intergenic
CTCAGAGGGTAAACTGATTG+TGG 0.510531 7.2:+72313653 MS.gene044821:CDS
AAGATCTTCATGACAGGAGC+AGG 0.513671 7.2:-72315538 None:intergenic
ACCTTCACCGTATACGGAAA+GGG 0.514785 7.2:-72315259 None:intergenic
TGAAGAATATGCTTAGCATC+AGG 0.522838 7.2:-72313792 None:intergenic
TATGGAGTTTGTTAACTCAT+GGG 0.537855 7.2:+72314793 MS.gene044821:CDS
TTGAACCAAAACTTCCCAAA+GGG 0.539116 7.2:+72315173 MS.gene044821:CDS
TCCTCTCTTGACCATGTGAA+AGG 0.539507 7.2:-72315489 None:intergenic
GTTTGATGGAATTGGAGCTA+TGG 0.548532 7.2:+72314775 MS.gene044821:CDS
GAAACCGGTCCAGACAGAAC+CGG 0.551440 7.2:-72315439 None:intergenic
CCGAAATCGGTGGTATGAAA+CGG 0.552192 7.2:-72315406 None:intergenic
AAAAGTGTACAAGCCAAAGA+TGG 0.555885 7.2:-72315361 None:intergenic
AGAACCGGTTCTGTCTGGAC+CGG 0.557075 7.2:+72315435 MS.gene044821:CDS
GCCCTTTCCGTATACGGTGA+AGG 0.557341 7.2:+72315258 MS.gene044821:CDS
TACTGATAGTTACATGAGAT+CGG 0.559146 7.2:+72315306 MS.gene044821:CDS
TATTCAAGATGCAATCAAGA+TGG 0.561804 7.2:+72315282 MS.gene044821:CDS
CCATCTGAAGAAACAAAGAA+AGG 0.565357 7.2:+72313462 MS.gene044821:CDS
AGAACTGGAGGGACGGAGAG+TGG 0.571956 7.2:-72314836 None:intergenic
TCTTGGAAGATCTTCATGAC+AGG 0.573252 7.2:-72315544 None:intergenic
TCCTTTCACATGGTCAAGAG+AGG 0.581268 7.2:+72315488 MS.gene044821:CDS
AAACTGATTGTGGATTGTAC+AGG 0.586136 7.2:+72313663 MS.gene044821:CDS
AGATTAAGTATAAGCTCAGA+GGG 0.587672 7.2:+72313639 MS.gene044821:CDS
CAGCTGACCAAGTTCAAATG+TGG 0.590914 7.2:+72314716 MS.gene044821:intron
AACCTTCACCGTATACGGAA+AGG 0.593644 7.2:-72315260 None:intergenic
ATGGAGTTTGTTAACTCATG+GGG 0.595449 7.2:+72314794 MS.gene044821:CDS
GTGCAAATGCTCTATCTTCG+GGG 0.597277 7.2:-72314888 None:intergenic
AATCACTTCCTTCTCCGGCA+AGG 0.599797 7.2:-72315461 None:intergenic
CTGACCAAGTTCAAATGTGG+AGG 0.605830 7.2:+72314719 MS.gene044821:CDS
TTTGAACCAAAACTTCCCAA+AGG 0.608712 7.2:+72315172 MS.gene044821:CDS
ATACTTAATCTCCCAGCAAG+AGG 0.610225 7.2:-72313627 None:intergenic
TGCAAATGCTCTATCTTCGG+GGG 0.613923 7.2:-72314887 None:intergenic
ATGCTTCGGTCAAGAACTGG+AGG 0.620290 7.2:-72314848 None:intergenic
ATATTACAAAACCTGATCCA+AGG 0.621561 7.2:+72313742 MS.gene044821:CDS
TCGGTCAAGAACTGGAGGGA+CGG 0.623713 7.2:-72314843 None:intergenic
CATACCTGAGCAACCAAAGG+AGG 0.626730 7.2:-72313819 None:intergenic
TACTTAATCTCCCAGCAAGA+GGG 0.629161 7.2:-72313626 None:intergenic
AAACATACCTGAGCAACCAA+AGG 0.647608 7.2:-72313822 None:intergenic
GAGATTAAGTATAAGCTCAG+AGG 0.659227 7.2:+72313638 MS.gene044821:CDS
TCATGGGGAGAAATAGCAAG+AGG 0.661263 7.2:+72314809 MS.gene044821:CDS
TTCTCCCCAACCGAAATCGG+TGG 0.671335 7.2:-72315416 None:intergenic
ATTGTGGATTGTACAGGAGA+AGG 0.683782 7.2:+72313669 MS.gene044821:CDS
TGCTTCGGTCAAGAACTGGA+GGG 0.700549 7.2:-72314847 None:intergenic
AAAGCTTTAGAAGATGATGG+CGG 0.739373 7.2:+72315022 MS.gene044821:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTAATTTTTTTAGTTAA+GGG + chr7.2:72314159-72314178 MS.gene044821:intron 10.0%
!!! TTGTTTAATTTTTTTAGTTA+AGG + chr7.2:72314158-72314177 MS.gene044821:intron 10.0%
!! AAAAATATTTAGTACATGTT+TGG - chr7.2:72314285-72314304 None:intergenic 15.0%
!! GAAAATTCTAATTATCAAAA+TGG + chr7.2:72313390-72313409 MS.gene044821:CDS 15.0%
!!! CTATTTGAGAAATTTTAAAT+AGG - chr7.2:72314351-72314370 None:intergenic 15.0%
!! ATTTGTGTATGATAAACATA+AGG + chr7.2:72314511-72314530 MS.gene044821:intron 20.0%
!! CCAAATTATTTAAGAGTTTA+GGG - chr7.2:72314049-72314068 None:intergenic 20.0%
!! TCCAAATTATTTAAGAGTTT+AGG - chr7.2:72314050-72314069 None:intergenic 20.0%
!! TTTGATTATTGACATAGAAA+CGG - chr7.2:72314629-72314648 None:intergenic 20.0%
!!! CTCTTAAATAATTTGGAATT+TGG + chr7.2:72314053-72314072 MS.gene044821:intron 20.0%
! AATTGTTCAATGGAAGAAAT+TGG + chr7.2:72313717-72313736 MS.gene044821:CDS 25.0%
! ACATGATTCAATGTATTCAT+AGG + chr7.2:72313951-72313970 MS.gene044821:intron 25.0%
! ACTTCAGTGACAAAAAATAA+AGG - chr7.2:72314396-72314415 None:intergenic 25.0%
! CATCATTTCATCTTCATATA+AGG - chr7.2:72314954-72314973 None:intergenic 25.0%
! CCCTAAACTCTTAAATAATT+TGG + chr7.2:72314046-72314065 MS.gene044821:intron 25.0%
!! TACTTTTGAACTTAGACATT+TGG - chr7.2:72314425-72314444 None:intergenic 25.0%
!!! AAAAAAGCTTTAGAAGATGA+TGG + chr7.2:72315019-72315038 MS.gene044821:CDS 25.0%
!!! TTCAATTCTTTTAGTTTCTC+AGG - chr7.2:72314998-72315017 None:intergenic 25.0%
AGATTAAGTATAAGCTCAGA+GGG + chr7.2:72313639-72313658 MS.gene044821:CDS 30.0%
ATATTACAAAACCTGATCCA+AGG + chr7.2:72313742-72313761 MS.gene044821:CDS 30.0%
ATGAATCACTGTATGTTTGA+TGG + chr7.2:72314761-72314780 MS.gene044821:CDS 30.0%
CATACACAAATTCCTATGAA+GGG - chr7.2:72314502-72314521 None:intergenic 30.0%
TACTGATAGTTACATGAGAT+CGG + chr7.2:72315306-72315325 MS.gene044821:CDS 30.0%
TATTCAAGATGCAATCAAGA+TGG + chr7.2:72315282-72315301 MS.gene044821:CDS 30.0%
TCAGAGGTTACTTGTAATTT+GGG + chr7.2:72314022-72314041 MS.gene044821:intron 30.0%
TCATACACAAATTCCTATGA+AGG - chr7.2:72314503-72314522 None:intergenic 30.0%
TCTCAAATTATTATCCGTGT+CGG - chr7.2:72313926-72313945 None:intergenic 30.0%
TGCTTCAAAAATGAAGAGAA+AGG + chr7.2:72313543-72313562 MS.gene044821:CDS 30.0%
TGTCTCACAAGTATCATAAA+AGG + chr7.2:72314547-72314566 MS.gene044821:intron 30.0%
TTCAGAGGTTACTTGTAATT+TGG + chr7.2:72314021-72314040 MS.gene044821:intron 30.0%
! TTCATATAAGGTACTAGTGT+TGG - chr7.2:72314942-72314961 None:intergenic 30.0%
!! TATGGAGTTTGTTAACTCAT+GGG + chr7.2:72314793-72314812 MS.gene044821:CDS 30.0%
!!! GTTACTAGTCTTTTTGTAGT+TGG + chr7.2:72313846-72313865 MS.gene044821:intron 30.0%
!!! TGTTTTGATCAAGGTTTGAT+AGG - chr7.2:72313497-72313516 None:intergenic 30.0%
!!! TTACAGCAATGTTTTGATCA+AGG - chr7.2:72313506-72313525 None:intergenic 30.0%
AAAACCTCCACATTTGAACT+TGG - chr7.2:72314726-72314745 None:intergenic 35.0%
AACAAAATCACTTCCTTCTC+CGG - chr7.2:72315469-72315488 None:intergenic 35.0%
AAGTGCTTTCAGCATTTGTT+TGG + chr7.2:72315071-72315090 MS.gene044821:CDS 35.0%
CACTGTATGTTTGATGGAAT+TGG + chr7.2:72314767-72314786 MS.gene044821:CDS 35.0%
CCATCTGAAGAAACAAAGAA+AGG + chr7.2:72313462-72313481 MS.gene044821:CDS 35.0%
CTTCAATGTCAGCAAATTCT+TGG - chr7.2:72314913-72314932 None:intergenic 35.0%
GAATGCTTGTGAAGTGATTA+AGG + chr7.2:72313572-72313591 MS.gene044821:CDS 35.0%
GAGATTAAGTATAAGCTCAG+AGG + chr7.2:72313638-72313657 MS.gene044821:CDS 35.0%
TCAAGTGTATCTTTGATGAG+CGG + chr7.2:72314188-72314207 MS.gene044821:intron 35.0%
TCTTGACCGAAGCATATTAA+AGG + chr7.2:72314856-72314875 MS.gene044821:CDS 35.0%
TGAAGAATATGCTTAGCATC+AGG - chr7.2:72313795-72313814 None:intergenic 35.0%
TGAATAACCTTCACCGTATA+CGG - chr7.2:72315268-72315287 None:intergenic 35.0%
TTCATTATTACCCTCTTGCT+GGG + chr7.2:72313616-72313635 MS.gene044821:CDS 35.0%
TTGAACCAAAACTTCCCAAA+GGG + chr7.2:72315173-72315192 MS.gene044821:CDS 35.0%
TTTGAACCAAAACTTCCCAA+AGG + chr7.2:72315172-72315191 MS.gene044821:CDS 35.0%
! AAAAGTGTACAAGCCAAAGA+TGG - chr7.2:72315364-72315383 None:intergenic 35.0%
! AAACTGATTGTGGATTGTAC+AGG + chr7.2:72313663-72313682 MS.gene044821:CDS 35.0%
! AAATGTGGAGGTTTTTCTCT+TGG + chr7.2:72314731-72314750 MS.gene044821:CDS 35.0%
! ACAAATGCTGTTTGTAAAGC+AGG + chr7.2:72315220-72315239 MS.gene044821:CDS 35.0%
! CCTTTCTTTGTTTCTTCAGA+TGG - chr7.2:72313465-72313484 None:intergenic 35.0%
! GTACACTTTTGATCACAACT+TGG + chr7.2:72315374-72315393 MS.gene044821:CDS 35.0%
! GTGATTTTGTTCCTTTCACA+TGG + chr7.2:72315478-72315497 MS.gene044821:CDS 35.0%
! TTCTTTGTTTCTTCAGATGG+TGG - chr7.2:72313462-72313481 None:intergenic 35.0%
! TTTTGATCACAACTTGGTCT+AGG + chr7.2:72315380-72315399 MS.gene044821:CDS 35.0%
!! AAAGCTTTAGAAGATGATGG+CGG + chr7.2:72315022-72315041 MS.gene044821:CDS 35.0%
!! AAATACCCTTTGGGAAGTTT+TGG - chr7.2:72315181-72315200 None:intergenic 35.0%
!! AGAAGCATTAATGTGCTTCT+TGG + chr7.2:72315511-72315530 MS.gene044821:CDS 35.0%
!! AGAAGCTTTGTTTCTTGTTC+TGG - chr7.2:72315127-72315146 None:intergenic 35.0%
!! ATCGGCTATCGATTATTTTG+AGG + chr7.2:72315324-72315343 MS.gene044821:CDS 35.0%
!! ATGGAGTTTGTTAACTCATG+GGG + chr7.2:72314794-72314813 MS.gene044821:CDS 35.0%
!! CTATGGAGTTTGTTAACTCA+TGG + chr7.2:72314792-72314811 MS.gene044821:CDS 35.0%
!! TAGTTACTTGCTATGAACCA+CGG + chr7.2:72313883-72313902 MS.gene044821:intron 35.0%
!!! AAACTTCCCAAAGGGTATTT+TGG + chr7.2:72315181-72315200 MS.gene044821:CDS 35.0%
!!! AACTTCCCAAAGGGTATTTT+GGG + chr7.2:72315182-72315201 MS.gene044821:CDS 35.0%
!!! AAGCTTCTTTTTGCTGTTGA+TGG + chr7.2:72315139-72315158 MS.gene044821:CDS 35.0%
!!! ATTTTGAGGTAACAAGAGCT+AGG + chr7.2:72315338-72315357 MS.gene044821:CDS 35.0%
!!! TCTTTTTGCTGTTGATGGAA+GGG + chr7.2:72315144-72315163 MS.gene044821:CDS 35.0%
!!! TTCTTTTTGCTGTTGATGGA+AGG + chr7.2:72315143-72315162 MS.gene044821:CDS 35.0%
AAACATACCTGAGCAACCAA+AGG - chr7.2:72313825-72313844 None:intergenic 40.0%
AATATGCTTCGGTCAAGAAC+TGG - chr7.2:72314854-72314873 None:intergenic 40.0%
ATACTTAATCTCCCAGCAAG+AGG - chr7.2:72313630-72313649 None:intergenic 40.0%
CCATTCCCAAAATACCCTTT+GGG - chr7.2:72315190-72315209 None:intergenic 40.0%
GGCTGAAGCTAATTGTTCAA+TGG + chr7.2:72313707-72313726 MS.gene044821:CDS 40.0%
GTTCATTATTACCCTCTTGC+TGG + chr7.2:72313615-72313634 MS.gene044821:CDS 40.0%
GTTTGATGGAATTGGAGCTA+TGG + chr7.2:72314775-72314794 MS.gene044821:CDS 40.0%
TACTTAATCTCCCAGCAAGA+GGG - chr7.2:72313629-72313648 None:intergenic 40.0%
TATTCTTCAGATGCCTCCTT+TGG + chr7.2:72313806-72313825 MS.gene044821:CDS 40.0%
TCCATTCCCAAAATACCCTT+TGG - chr7.2:72315191-72315210 None:intergenic 40.0%
TCTTGGAAGATCTTCATGAC+AGG - chr7.2:72315547-72315566 None:intergenic 40.0%
TGCGGACCTTTAATATGCTT+CGG - chr7.2:72314865-72314884 None:intergenic 40.0%
TGGTGCAAATGCTCTATCTT+CGG - chr7.2:72314893-72314912 None:intergenic 40.0%
! ATTGTGGATTGTACAGGAGA+AGG + chr7.2:72313669-72313688 MS.gene044821:CDS 40.0%
! TGTATTCATAGGTGTCGTGT+CGG + chr7.2:72313962-72313981 MS.gene044821:intron 40.0%
!! CAAGTGTTGGTTCACTTGTT+AGG - chr7.2:72313437-72313456 None:intergenic 40.0%
!! TACAAGTAACCTCTGAAGCA+TGG - chr7.2:72314018-72314037 None:intergenic 40.0%
!!! AGAAGGTGCTCTTTTTGTTG+AGG + chr7.2:72313686-72313705 MS.gene044821:CDS 40.0%
AAACCTGATCCAAGGACTCT+TGG + chr7.2:72313750-72313769 MS.gene044821:CDS 45.0%
AACAAGAGCTAGGCCATCTT+TGG + chr7.2:72315348-72315367 MS.gene044821:CDS 45.0%
AACCTTCACCGTATACGGAA+AGG - chr7.2:72315263-72315282 None:intergenic 45.0%
AAGATCTTCATGACAGGAGC+AGG - chr7.2:72315541-72315560 None:intergenic 45.0%
ACCAACATACCAAGAGTCCT+TGG - chr7.2:72313762-72313781 None:intergenic 45.0%
ACCTTCACCGTATACGGAAA+GGG - chr7.2:72315262-72315281 None:intergenic 45.0%
ATACCAAGAGTCCTTGGATC+AGG - chr7.2:72313756-72313775 None:intergenic 45.0%
ATGGACGCTCCTCATATTTG+AGG - chr7.2:72313999-72314018 None:intergenic 45.0%
CAGCTGACCAAGTTCAAATG+TGG + chr7.2:72314716-72314735 MS.gene044821:intron 45.0%
CCGAAATCGGTGGTATGAAA+CGG - chr7.2:72315409-72315428 None:intergenic 45.0%
CTCAGAGGGTAAACTGATTG+TGG + chr7.2:72313653-72313672 MS.gene044821:CDS 45.0%
CTGACCAAGTTCAAATGTGG+AGG + chr7.2:72314719-72314738 MS.gene044821:CDS 45.0%
GAACAAGCCCTTTCCGTATA+CGG + chr7.2:72315252-72315271 MS.gene044821:CDS 45.0%
GCATTTCTCAAGCCCTTCAT+AGG + chr7.2:72314487-72314506 MS.gene044821:intron 45.0%
GGTGCAAATGCTCTATCTTC+GGG - chr7.2:72314892-72314911 None:intergenic 45.0%
GTGCAAATGCTCTATCTTCG+GGG - chr7.2:72314891-72314910 None:intergenic 45.0%
TCATGGGGAGAAATAGCAAG+AGG + chr7.2:72314809-72314828 MS.gene044821:CDS 45.0%
TCCAAGGACTCTTGGTATGT+TGG + chr7.2:72313758-72313777 MS.gene044821:CDS 45.0%
TCCTCTCTTGACCATGTGAA+AGG - chr7.2:72315492-72315511 None:intergenic 45.0%
TCCTTTCACATGGTCAAGAG+AGG + chr7.2:72315488-72315507 MS.gene044821:CDS 45.0%
TGCAAATGCTCTATCTTCGG+GGG - chr7.2:72314890-72314909 None:intergenic 45.0%
! TCCTCATATTTGAGGTGTCC+CGG - chr7.2:72313991-72314010 None:intergenic 45.0%
!! CCGTTTCATACCACCGATTT+CGG + chr7.2:72315406-72315425 MS.gene044821:CDS 45.0%
!! TCAGATGGTGGAACAAGTGT+TGG - chr7.2:72313450-72313469 None:intergenic 45.0%
!! TCATACCACCGATTTCGGTT+GGG + chr7.2:72315411-72315430 MS.gene044821:CDS 45.0%
!! TTCATACCACCGATTTCGGT+TGG + chr7.2:72315410-72315429 MS.gene044821:CDS 45.0%
!!! CCCAAAGGGTATTTTGGGAA+TGG + chr7.2:72315187-72315206 MS.gene044821:CDS 45.0%
AATCACTTCCTTCTCCGGCA+AGG - chr7.2:72315464-72315483 None:intergenic 50.0%
ATGCTTCGGTCAAGAACTGG+AGG - chr7.2:72314851-72314870 None:intergenic 50.0%
CATACCTGAGCAACCAAAGG+AGG - chr7.2:72313822-72313841 None:intergenic 50.0%
TCCGGGACACCTCAAATATG+AGG + chr7.2:72313987-72314006 MS.gene044821:intron 50.0%
TGCTTCGGTCAAGAACTGGA+GGG - chr7.2:72314850-72314869 None:intergenic 50.0%
TTGCTATGAACCACGGACAC+CGG + chr7.2:72313890-72313909 MS.gene044821:intron 50.0%
!! CATACCACCGATTTCGGTTG+GGG + chr7.2:72315412-72315431 MS.gene044821:CDS 50.0%
CGATTTCGGTTGGGGAGAAC+CGG + chr7.2:72315420-72315439 MS.gene044821:CDS 55.0%
CGGTTCTCCCCAACCGAAAT+CGG - chr7.2:72315422-72315441 None:intergenic 55.0%
GAAACCGGTCCAGACAGAAC+CGG - chr7.2:72315442-72315461 None:intergenic 55.0%
GATGCCTCCTTTGGTTGCTC+AGG + chr7.2:72313815-72313834 MS.gene044821:CDS 55.0%
GCCCTTTCCGTATACGGTGA+AGG + chr7.2:72315258-72315277 MS.gene044821:CDS 55.0%
GCTCTATCTTCGGGGGATTG+CGG - chr7.2:72314883-72314902 None:intergenic 55.0%
TCCTTCTCCGGCAAGGAAAC+CGG - chr7.2:72315457-72315476 None:intergenic 55.0%
TCGGTCAAGAACTGGAGGGA+CGG - chr7.2:72314846-72314865 None:intergenic 55.0%
TTCTCCCCAACCGAAATCGG+TGG - chr7.2:72315419-72315438 None:intergenic 55.0%
! AGAACCGGTTCTGTCTGGAC+CGG + chr7.2:72315435-72315454 MS.gene044821:CDS 55.0%
! ATAGGTGTCGTGTCGGTGTC+CGG + chr7.2:72313969-72313988 MS.gene044821:intron 55.0%
AGAACTGGAGGGACGGAGAG+TGG - chr7.2:72314839-72314858 None:intergenic 60.0%
! ACCGGTTTCCTTGCCGGAGA+AGG + chr7.2:72315453-72315472 MS.gene044821:CDS 60.0%
! GTCTGGACCGGTTTCCTTGC+CGG + chr7.2:72315447-72315466 MS.gene044821:CDS 60.0%
! TAGGTGTCGTGTCGGTGTCC+GGG + chr7.2:72313970-72313989 MS.gene044821:intron 60.0%
! TGGGGAGAACCGGTTCTGTC+TGG + chr7.2:72315430-72315449 MS.gene044821:CDS 60.0%
!! GAGGAGCGTCCATGCTTCAG+AGG + chr7.2:72314006-72314025 MS.gene044821:intron 60.0%
CCACGGACACCGGACACGAC+AGG + chr7.2:72313900-72313919 MS.gene044821:intron 70.0%
CCGGACACGACAGGCCGACA+CGG + chr7.2:72313909-72313928 MS.gene044821:intron 70.0%
CCTGTCGTGTCCGGTGTCCG+TGG - chr7.2:72313903-72313922 None:intergenic 70.0%
! CCGTGTCGGCCTGTCGTGTC+CGG - chr7.2:72313912-72313931 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 72313387 72315582 72313387 ID=MS.gene044821
chr7.2 mRNA 72313387 72315582 72313387 ID=MS.gene044821.t1;Parent=MS.gene044821
chr7.2 exon 72313387 72313836 72313387 ID=MS.gene044821.t1.exon1;Parent=MS.gene044821.t1
chr7.2 CDS 72313387 72313836 72313387 ID=cds.MS.gene044821.t1;Parent=MS.gene044821.t1
chr7.2 exon 72314719 72315582 72314719 ID=MS.gene044821.t1.exon2;Parent=MS.gene044821.t1
chr7.2 CDS 72314719 72315582 72314719 ID=cds.MS.gene044821.t1;Parent=MS.gene044821.t1
Gene Sequence

>MS.gene044821

ATGGAAAATTCTAATTATCAAAATGGCTTCAAACAAATTAATGTAAACCTAACAAGTGAACCAACACTTGTTCCACCATCTGAAGAAACAAAGAAAGGAATGTATTTCCTATCAAACCTTGATCAAAACATTGCTGTAATTGTAAGAACTGTTTATTGCTTCAAAAATGAAGAGAAAGGAAATGAGAATGCTTGTGAAGTGATTAAGGATGCATTGAAGAATGTTCTTGTTCATTATTACCCTCTTGCTGGGAGATTAAGTATAAGCTCAGAGGGTAAACTGATTGTGGATTGTACAGGAGAAGGTGCTCTTTTTGTTGAGGCTGAAGCTAATTGTTCAATGGAAGAAATTGGTGATATTACAAAACCTGATCCAAGGACTCTTGGTATGTTGGTTTATGATATTCCTGATGCTAAGCATATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTATGTTTTGTTACTAGTCTTTTTGTAGTTGGATTTCTAGATTTGTTAGTTACTTGCTATGAACCACGGACACCGGACACGACAGGCCGACACGGATAATAATTTGAGAAAATGACATGATTCAATGTATTCATAGGTGTCGTGTCGGTGTCCGGGACACCTCAAATATGAGGAGCGTCCATGCTTCAGAGGTTACTTGTAATTTGGGTCCCTAAACTCTTAAATAATTTGGAATTTGGTTTCTAAATTTAGAGACTCAAATACAAAGTATTTAAAAGTTTAGAAGAGACATAATTATAAATGATTTAGAAGTTTAGAGACTTGTTTAATTTTTTTAGTTAAGGGATCTAATCAAGTGTATCTTTGATGAGCGGCGAGTTTGACTTTGTTGAAACTCTAAAGTATAGTTTTTGTCAAGTGTGATTATGACAATTTCACTGTCAATCCAAACATGTACTAAATATTTTTGACAAATTCAGAAATTCAATTACTAACTTTTTAAATTCGTAGACCTATTTAAAATTTCTCAAATAGTTCTGTGACATAAATAATTAAACCTTTATTTTTTGTCACTGAAGTTCATGACCAAATGTCTAAGTTCAAAAGTATAGAGACTAGATATATGTTAAGAATAGAAATTGTCACATCTAGCATTTCTCAAGCCCTTCATAGGAATTTGTGTATGATAAACATAAGGTAGTCATTTTGAATGTCTCACAAGTATCATAAAAGGTTCAATCATATAGCAACTCATCATTTTTCAAATACTTGTGATTTTATGATATGATGCCGTTTCTATGTCAATAATCAAACAAGTCATAGTTAAAGTTTTATGTCACAGTCGCATCGCAACATGATCACTGAGTACATTTTATATTTCAGCTGACCAAGTTCAAATGTGGAGGTTTTTCTCTTGGACTATGTATGAATCACTGTATGTTTGATGGAATTGGAGCTATGGAGTTTGTTAACTCATGGGGAGAAATAGCAAGAGGTTTACCACTCTCCGTCCCTCCAGTTCTTGACCGAAGCATATTAAAGGTCCGCAATCCCCCGAAGATAGAGCATTTGCACCAAGAATTTGCTGACATTGAAGACAAATCCAACACTAGTACCTTATATGAAGATGAAATGATGTATAGATCATTCTGTTTCGATCCTGAGAAACTAAAAGAATTGAAGAAAAAAGCTTTAGAAGATGATGGCGGTGTTCTTGAATCTTGCACAACATTTGAAGTGCTTTCAGCATTTGTTTGGATAGCTAGAACAAAAGCACTGAAAATGTTACCAGAACAAGAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCTAAATTTGAACCAAAACTTCCCAAAGGGTATTTTGGGAATGGAATTATACTAACAAATGCTGTTTGTAAAGCAGGTGAAATTACGAACAAGCCCTTTCCGTATACGGTGAAGGTTATTCAAGATGCAATCAAGATGGTTACTGATAGTTACATGAGATCGGCTATCGATTATTTTGAGGTAACAAGAGCTAGGCCATCTTTGGCTTGTACACTTTTGATCACAACTTGGTCTAGGCTTCCGTTTCATACCACCGATTTCGGTTGGGGAGAACCGGTTCTGTCTGGACCGGTTTCCTTGCCGGAGAAGGAAGTGATTTTGTTCCTTTCACATGGTCAAGAGAGGAGAAGCATTAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATCTTCCAAGATTTAATGCAGATATAG
Protein sequence

>MS.gene044821.t1

MENSNYQNGFKQINVNLTSEPTLVPPSEETKKGMYFLSNLDQNIAVIVRTVYCFKNEEKGNENACEVIKDALKNVLVHYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPRTLGMLVYDIPDAKHILQMPPLVAQLTKFKCGGFSLGLCMNHCMFDGIGAMEFVNSWGEIARGLPLSVPPVLDRSILKVRNPPKIEHLHQEFADIEDKSNTSTLYEDEMMYRSFCFDPEKLKELKKKALEDDGGVLESCTTFEVLSAFVWIARTKALKMLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIILTNAVCKAGEITNKPFPYTVKVIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLPFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGQERRSINVLLGLPAPVMKIFQDLMQI