Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045389.t1 | XP_024633668.1 | 88.6 | 185 | 19 | 1 | 1 | 183 | 1 | 185 | 3.90E-71 | 277.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045389.t1 | O64864 | 44.1 | 118 | 64 | 1 | 7 | 122 | 12 | 129 | 3.2e-26 | 119.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045389.t1 | A0A396IUN5 | 88.6 | 185 | 19 | 1 | 1 | 183 | 1 | 185 | 2.8e-71 | 277.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067247 | MS.gene045389 | PPI |
| MS.gene59892 | MS.gene045389 | PPI |
| MS.gene066915 | MS.gene045389 | PPI |
| MS.gene016280 | MS.gene045389 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045389.t1 | MTR_3g083760 | 82.673 | 202 | 16 | 1 | 1 | 183 | 1 | 202 | 1.18e-94 | 273 |
| MS.gene045389.t1 | MTR_3g083760 | 87.413 | 143 | 16 | 1 | 1 | 141 | 1 | 143 | 6.48e-81 | 236 |
| MS.gene045389.t1 | MTR_8g085560 | 50.829 | 181 | 83 | 3 | 9 | 183 | 14 | 194 | 5.45e-66 | 201 |
| MS.gene045389.t1 | MTR_7g014880 | 42.222 | 180 | 93 | 3 | 8 | 176 | 12 | 191 | 3.99e-41 | 137 |
| MS.gene045389.t1 | MTR_8g446830 | 39.487 | 195 | 105 | 6 | 1 | 182 | 1 | 195 | 1.05e-36 | 126 |
| MS.gene045389.t1 | MTR_1g103450 | 31.333 | 150 | 79 | 4 | 12 | 161 | 15 | 140 | 7.10e-13 | 63.5 |
| MS.gene045389.t1 | MTR_1g103490 | 36.667 | 90 | 55 | 2 | 12 | 101 | 10 | 97 | 2.34e-12 | 62.0 |
| MS.gene045389.t1 | MTR_1g103470 | 39.189 | 74 | 42 | 2 | 28 | 101 | 25 | 95 | 1.66e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045389.t1 | AT1G55260 | 43.258 | 178 | 93 | 4 | 8 | 181 | 53 | 226 | 6.91e-44 | 145 |
| MS.gene045389.t1 | AT1G55260 | 43.258 | 178 | 90 | 5 | 8 | 181 | 53 | 223 | 2.21e-43 | 144 |
| MS.gene045389.t1 | AT2G44300 | 39.796 | 196 | 96 | 5 | 7 | 183 | 11 | 203 | 1.38e-40 | 136 |
| MS.gene045389.t1 | AT2G44290 | 38.579 | 197 | 96 | 4 | 9 | 183 | 11 | 204 | 1.60e-40 | 136 |
| MS.gene045389.t1 | AT3G58550 | 38.926 | 149 | 84 | 4 | 4 | 145 | 9 | 157 | 6.51e-30 | 108 |
| MS.gene045389.t1 | AT1G03103 | 31.915 | 94 | 64 | 0 | 8 | 101 | 2 | 95 | 1.91e-14 | 68.2 |
| MS.gene045389.t1 | AT5G09370 | 37.736 | 106 | 61 | 2 | 24 | 127 | 21 | 123 | 3.16e-14 | 66.6 |
| MS.gene045389.t1 | AT5G09370 | 37.600 | 125 | 64 | 5 | 24 | 138 | 21 | 141 | 3.74e-14 | 67.0 |
| MS.gene045389.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene045389.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene045389.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene045389.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene045389.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene045389.t1 | AT2G48130 | 36.559 | 93 | 57 | 2 | 10 | 101 | 8 | 99 | 4.19e-14 | 67.4 |
| MS.gene045389.t1 | AT5G09370 | 39.175 | 97 | 54 | 2 | 24 | 118 | 21 | 114 | 6.05e-14 | 66.6 |
| MS.gene045389.t1 | AT1G73890 | 39.189 | 74 | 45 | 0 | 31 | 104 | 30 | 103 | 7.41e-14 | 67.0 |
| MS.gene045389.t1 | AT3G22600 | 28.188 | 149 | 95 | 5 | 10 | 150 | 6 | 150 | 2.51e-12 | 62.4 |
| MS.gene045389.t1 | AT4G14815 | 30.000 | 90 | 62 | 1 | 12 | 101 | 7 | 95 | 4.42e-11 | 58.9 |
Find 51 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAATTACCGCTGGAAAT+AGG | 0.158824 | 3.4:+78618045 | None:intergenic |
| TCTTATCAAGGACTTGTTTA+AGG | 0.173161 | 3.4:+78618737 | None:intergenic |
| ACCTTAGCTTCAGGGGATTT+AGG | 0.238114 | 3.4:+78618111 | None:intergenic |
| AATAATTACCGCTGGAAATA+GGG | 0.274317 | 3.4:+78618046 | None:intergenic |
| AAGGAGGTGGCTGGTGGCAG+AGG | 0.280788 | 3.4:-78617886 | MS.gene045389:CDS |
| ATTCAACTTGATACCAAGTT+TGG | 0.282616 | 3.4:+78618672 | None:intergenic |
| GATAAACTTGTTACTCTTGC+TGG | 0.316761 | 3.4:-78618817 | MS.gene045389:CDS |
| CCTTCAAACACCTTAGCTTC+AGG | 0.355634 | 3.4:+78618102 | None:intergenic |
| TTCAACTTGATACCAAGTTT+GGG | 0.358716 | 3.4:+78618673 | None:intergenic |
| ACACATTCAGTTATATTAGA+TGG | 0.359046 | 3.4:+78618610 | None:intergenic |
| TGGATTGGGAAGGAGGTGGC+TGG | 0.375917 | 3.4:-78617895 | MS.gene045389:CDS |
| AGGGGAGGAACTGTTTGTTT+TGG | 0.377595 | 3.4:+78618065 | None:intergenic |
| GAAAAGAGTGGTGGTGGATT+GGG | 0.380896 | 3.4:-78617909 | MS.gene045389:CDS |
| TGCATTATTATTTCTACTGT+TGG | 0.388007 | 3.4:-78618887 | MS.gene045389:CDS |
| TTATTATTTCTACTGTTGGC+TGG | 0.403176 | 3.4:-78618883 | MS.gene045389:CDS |
| CTTATCAAGGACTTGTTTAA+GGG | 0.407090 | 3.4:+78618738 | None:intergenic |
| GATGGTATGTGACAAGCGTT+TGG | 0.413443 | 3.4:+78618628 | None:intergenic |
| GGAAAAGAGTGGTGGTGGAT+TGG | 0.435272 | 3.4:-78617910 | MS.gene045389:CDS |
| GCTAAGGTGTTTGAAGGACT+TGG | 0.437073 | 3.4:-78618096 | MS.gene045389:CDS |
| GAGGTGGCTGGTGGCAGAGG+TGG | 0.447551 | 3.4:-78617883 | MS.gene045389:CDS |
| AAGTGAGATATGAAAAGAAA+TGG | 0.450601 | 3.4:+78617846 | None:intergenic |
| GGAAGTACAACAATCTATAG+TGG | 0.456166 | 3.4:+78618759 | None:intergenic |
| CTTCAAACACCTTAGCTTCA+GGG | 0.472455 | 3.4:+78618103 | None:intergenic |
| ACCTAAATCCCCTGAAGCTA+AGG | 0.474094 | 3.4:-78618112 | MS.gene045389:CDS |
| CCTGAAGCTAAGGTGTTTGA+AGG | 0.476875 | 3.4:-78618102 | MS.gene045389:CDS |
| GATCGCAATGACCCCAAACT+TGG | 0.492547 | 3.4:-78618685 | MS.gene045389:CDS |
| GTGGTGGATTGGGAAGGAGG+TGG | 0.495091 | 3.4:-78617899 | MS.gene045389:CDS |
| GTGGTGGTGGATTGGGAAGG+AGG | 0.496077 | 3.4:-78617902 | MS.gene045389:CDS |
| TCTGAGGAAAAGAGTGGTGG+TGG | 0.499326 | 3.4:-78617915 | MS.gene045389:CDS |
| TGTTTAAGGTTCTGCTGAGA+GGG | 0.503753 | 3.4:-78617952 | MS.gene045389:intron |
| GAAGTACAACAATCTATAGT+GGG | 0.507467 | 3.4:+78618760 | None:intergenic |
| ATTGGGAAGGAGGTGGCTGG+TGG | 0.530641 | 3.4:-78617892 | MS.gene045389:CDS |
| TCAAACTTGAACTTCAAGCT+AGG | 0.546383 | 3.4:+78617817 | None:intergenic |
| TTCAAACACCTTAGCTTCAG+GGG | 0.554009 | 3.4:+78618104 | None:intergenic |
| ATAATTACCGCTGGAAATAG+GGG | 0.565206 | 3.4:+78618047 | None:intergenic |
| GGTTGTCTTCCATACGTTGG+TGG | 0.578596 | 3.4:-78618796 | MS.gene045389:CDS |
| GCTGGTTGTCTTCCATACGT+TGG | 0.583066 | 3.4:-78618799 | MS.gene045389:CDS |
| TTGGCACTACCACCAACGTA+TGG | 0.586024 | 3.4:+78618787 | None:intergenic |
| TGGAAGCTGTACAGCAAGAG+TGG | 0.593369 | 3.4:+78618648 | None:intergenic |
| TCAACTTGATACCAAGTTTG+GGG | 0.608436 | 3.4:+78618674 | None:intergenic |
| ATGTTTAAGGTTCTGCTGAG+AGG | 0.614875 | 3.4:-78617953 | MS.gene045389:intron |
| AGAGTGGTGGTGGATTGGGA+AGG | 0.615185 | 3.4:-78617905 | MS.gene045389:CDS |
| GGGATCAAGCTCAAGTTCTG+AGG | 0.620498 | 3.4:-78617931 | MS.gene045389:CDS |
| GGTCATTGCGATCTTTGATG+AGG | 0.621163 | 3.4:+78618695 | None:intergenic |
| GTTTAAGGTTCTGCTGAGAG+GGG | 0.633464 | 3.4:-78617951 | MS.gene045389:intron |
| AAGTACAACAATCTATAGTG+GGG | 0.642782 | 3.4:+78618761 | None:intergenic |
| AGTTCCTCCCCTATTTCCAG+CGG | 0.660557 | 3.4:-78618054 | MS.gene045389:intron |
| ATTACCGCTGGAAATAGGGG+AGG | 0.669828 | 3.4:+78618050 | None:intergenic |
| TCAAGTTCTGAGGAAAAGAG+TGG | 0.677014 | 3.4:-78617921 | MS.gene045389:CDS |
| AGTACAACAATCTATAGTGG+GGG | 0.691483 | 3.4:+78618762 | None:intergenic |
| AGTTCTGAGGAAAAGAGTGG+TGG | 0.693229 | 3.4:-78617918 | MS.gene045389:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATGAGAATTTTTTTTTGT+TGG | - | chr3.4:78618490-78618509 | MS.gene045389:intron | 15.0% |
| !! | AAAATTATAATAATTACCGC+TGG | + | chr3.4:78618708-78618727 | None:intergenic | 20.0% |
| !! | ATATAAATAAGGCTTAATCA+TGG | - | chr3.4:78618373-78618392 | MS.gene045389:intron | 20.0% |
| !!! | TAGTTTGCTTTATGTATTAA+GGG | - | chr3.4:78618198-78618217 | MS.gene045389:intron | 20.0% |
| !!! | TTAGTTTGCTTTATGTATTA+AGG | - | chr3.4:78618197-78618216 | MS.gene045389:intron | 20.0% |
| ! | AAGTGAGATATGAAAAGAAA+TGG | + | chr3.4:78618900-78618919 | None:intergenic | 25.0% |
| ! | ACACATTCAGTTATATTAGA+TGG | + | chr3.4:78618136-78618155 | None:intergenic | 25.0% |
| ! | AGAACCTTAAACATTATTAG+AGG | + | chr3.4:78618784-78618803 | None:intergenic | 25.0% |
| ! | ATAATCTTCAAAAGTAAGTG+AGG | - | chr3.4:78618404-78618423 | MS.gene045389:intron | 25.0% |
| ! | TCTAATATAACTGAATGTGT+AGG | - | chr3.4:78618136-78618155 | MS.gene045389:intron | 25.0% |
| !!! | CACTTACTTTTGAAGATTAT+TGG | + | chr3.4:78618404-78618423 | None:intergenic | 25.0% |
| !!! | GAGAATTTTTTTTTGTTGGT+CGG | - | chr3.4:78618494-78618513 | MS.gene045389:intron | 25.0% |
| !!! | TGCATTATTATTTCTACTGT+TGG | - | chr3.4:78617856-78617875 | MS.gene045389:CDS | 25.0% |
| AAGTACAACAATCTATAGTG+GGG | + | chr3.4:78617985-78618004 | None:intergenic | 30.0% | |
| AATAATTACCGCTGGAAATA+GGG | + | chr3.4:78618700-78618719 | None:intergenic | 30.0% | |
| ATTCAACTTGATACCAAGTT+TGG | + | chr3.4:78618074-78618093 | None:intergenic | 30.0% | |
| CATATGTATATAGTCCAATC+AGG | + | chr3.4:78618224-78618243 | None:intergenic | 30.0% | |
| GAAGTACAACAATCTATAGT+GGG | + | chr3.4:78617986-78618005 | None:intergenic | 30.0% | |
| TAATAATTACCGCTGGAAAT+AGG | + | chr3.4:78618701-78618720 | None:intergenic | 30.0% | |
| TGTGCCTCTAATAATGTTTA+AGG | - | chr3.4:78618777-78618796 | MS.gene045389:CDS | 30.0% | |
| TTCAACTTGATACCAAGTTT+GGG | + | chr3.4:78618073-78618092 | None:intergenic | 30.0% | |
| ! | CTTATCAAGGACTTGTTTAA+GGG | + | chr3.4:78618008-78618027 | None:intergenic | 30.0% |
| ! | TAATGCAGTTACACTTTTGT+TGG | + | chr3.4:78617843-78617862 | None:intergenic | 30.0% |
| ! | TCTTATCAAGGACTTGTTTA+AGG | + | chr3.4:78618009-78618028 | None:intergenic | 30.0% |
| !! | ACATTCCATTGAGTTGAATT+AGG | + | chr3.4:78618566-78618585 | None:intergenic | 30.0% |
| !! | ACTTTTGAAGATTATTGGAC+CGG | + | chr3.4:78618399-78618418 | None:intergenic | 30.0% |
| !! | TTATTATTTCTACTGTTGGC+TGG | - | chr3.4:78617860-78617879 | MS.gene045389:CDS | 30.0% |
| !!! | TGCATTTTTTGGTCTTATCA+AGG | + | chr3.4:78618021-78618040 | None:intergenic | 30.0% |
| AAATAAGGCTTAATCATGGC+CGG | - | chr3.4:78618377-78618396 | MS.gene045389:intron | 35.0% | |
| AATGTCTCATGTGACAAAAG+AGG | + | chr3.4:78618456-78618475 | None:intergenic | 35.0% | |
| AGTACAACAATCTATAGTGG+GGG | + | chr3.4:78617984-78618003 | None:intergenic | 35.0% | |
| ATAATTACCGCTGGAAATAG+GGG | + | chr3.4:78618699-78618718 | None:intergenic | 35.0% | |
| TCAACTTGATACCAAGTTTG+GGG | + | chr3.4:78618072-78618091 | None:intergenic | 35.0% | |
| TTATGTATTAAGGGCCTGAT+TGG | - | chr3.4:78618207-78618226 | MS.gene045389:intron | 35.0% | |
| ! | GGAAGTACAACAATCTATAG+TGG | + | chr3.4:78617987-78618006 | None:intergenic | 35.0% |
| !! | GATAAACTTGTTACTCTTGC+TGG | - | chr3.4:78617926-78617945 | MS.gene045389:CDS | 35.0% |
| !!! | GAGGATACAGATGCATTTTT+TGG | + | chr3.4:78618032-78618051 | None:intergenic | 35.0% |
| CTTCAAACACCTTAGCTTCA+GGG | + | chr3.4:78618643-78618662 | None:intergenic | 40.0% | |
| GGTGACAAATGTAGAAGATC+TGG | + | chr3.4:78618614-78618633 | None:intergenic | 40.0% | |
| TTCAAACACCTTAGCTTCAG+GGG | + | chr3.4:78618642-78618661 | None:intergenic | 40.0% | |
| ! | ACAATCTATAGTGGGGGTAT+TGG | + | chr3.4:78617978-78617997 | None:intergenic | 40.0% |
| ! | ATGTTTAAGGTTCTGCTGAG+AGG | - | chr3.4:78618790-78618809 | MS.gene045389:CDS | 40.0% |
| ! | TGTTTAAGGTTCTGCTGAGA+GGG | - | chr3.4:78618791-78618810 | MS.gene045389:CDS | 40.0% |
| !! | ATTGAGTTGAATTAGGCACG+GGG | + | chr3.4:78618559-78618578 | None:intergenic | 40.0% |
| !! | CATTGAGTTGAATTAGGCAC+GGG | + | chr3.4:78618560-78618579 | None:intergenic | 40.0% |
| !! | CCATTGAGTTGAATTAGGCA+CGG | + | chr3.4:78618561-78618580 | None:intergenic | 40.0% |
| !! | TAGTAGCTTTACTTTTGCGC+CGG | - | chr3.4:78618533-78618552 | MS.gene045389:intron | 40.0% |
| !! | TCAAGTTCTGAGGAAAAGAG+TGG | - | chr3.4:78618822-78618841 | MS.gene045389:CDS | 40.0% |
| ACCTAAATCCCCTGAAGCTA+AGG | - | chr3.4:78618631-78618650 | MS.gene045389:CDS | 45.0% | |
| ACCTTAGCTTCAGGGGATTT+AGG | + | chr3.4:78618635-78618654 | None:intergenic | 45.0% | |
| CCGTGCCTAATTCAACTCAA+TGG | - | chr3.4:78618558-78618577 | MS.gene045389:intron | 45.0% | |
| CCTTCAAACACCTTAGCTTC+AGG | + | chr3.4:78618644-78618663 | None:intergenic | 45.0% | |
| GATGGTATGTGACAAGCGTT+TGG | + | chr3.4:78618118-78618137 | None:intergenic | 45.0% | |
| GGTCATTGCGATCTTTGATG+AGG | + | chr3.4:78618051-78618070 | None:intergenic | 45.0% | |
| ! | AGGGGAGGAACTGTTTGTTT+TGG | + | chr3.4:78618681-78618700 | None:intergenic | 45.0% |
| ! | CCTGAAGCTAAGGTGTTTGA+AGG | - | chr3.4:78618641-78618660 | MS.gene045389:CDS | 45.0% |
| ! | GCTAAGGTGTTTGAAGGACT+TGG | - | chr3.4:78618647-78618666 | MS.gene045389:CDS | 45.0% |
| ! | GTTTAAGGTTCTGCTGAGAG+GGG | - | chr3.4:78618792-78618811 | MS.gene045389:CDS | 45.0% |
| !! | AGTTCTGAGGAAAAGAGTGG+TGG | - | chr3.4:78618825-78618844 | MS.gene045389:CDS | 45.0% |
| !! | GAAAAGAGTGGTGGTGGATT+GGG | - | chr3.4:78618834-78618853 | MS.gene045389:CDS | 45.0% |
| !! | GCTACTAAAGCCGTCGTTTT+TGG | + | chr3.4:78618520-78618539 | None:intergenic | 45.0% |
| !! | TTAAAATGTTTATATAAATA+AGG | - | chr3.4:78618362-78618381 | MS.gene045389:intron | 5.0% |
| AGTTCCTCCCCTATTTCCAG+CGG | - | chr3.4:78618689-78618708 | MS.gene045389:CDS | 50.0% | |
| ATTACCGCTGGAAATAGGGG+AGG | + | chr3.4:78618696-78618715 | None:intergenic | 50.0% | |
| GATCGCAATGACCCCAAACT+TGG | - | chr3.4:78618058-78618077 | MS.gene045389:CDS | 50.0% | |
| GCTGGTTGTCTTCCATACGT+TGG | - | chr3.4:78617944-78617963 | MS.gene045389:CDS | 50.0% | |
| GGGATCAAGCTCAAGTTCTG+AGG | - | chr3.4:78618812-78618831 | MS.gene045389:CDS | 50.0% | |
| GGTTGTCTTCCATACGTTGG+TGG | - | chr3.4:78617947-78617966 | MS.gene045389:CDS | 50.0% | |
| TCTGAGGAAAAGAGTGGTGG+TGG | - | chr3.4:78618828-78618847 | MS.gene045389:CDS | 50.0% | |
| TGGAAGCTGTACAGCAAGAG+TGG | + | chr3.4:78618098-78618117 | None:intergenic | 50.0% | |
| TGTTGGTCGGCCAAAAACGA+CGG | - | chr3.4:78618507-78618526 | MS.gene045389:intron | 50.0% | |
| TTGGCACTACCACCAACGTA+TGG | + | chr3.4:78617959-78617978 | None:intergenic | 50.0% | |
| !! | GGAAAAGAGTGGTGGTGGAT+TGG | - | chr3.4:78618833-78618852 | MS.gene045389:CDS | 50.0% |
| AGTTGAATTAGGCACGGGGC+CGG | + | chr3.4:78618555-78618574 | None:intergenic | 55.0% | |
| !! | AGAGTGGTGGTGGATTGGGA+AGG | - | chr3.4:78618838-78618857 | MS.gene045389:CDS | 55.0% |
| ATTGGGAAGGAGGTGGCTGG+TGG | - | chr3.4:78618851-78618870 | MS.gene045389:CDS | 60.0% | |
| ! | TGGATTGGGAAGGAGGTGGC+TGG | - | chr3.4:78618848-78618867 | MS.gene045389:CDS | 60.0% |
| !! | GTGGTGGATTGGGAAGGAGG+TGG | - | chr3.4:78618844-78618863 | MS.gene045389:CDS | 60.0% |
| !! | GTGGTGGTGGATTGGGAAGG+AGG | - | chr3.4:78618841-78618860 | MS.gene045389:CDS | 60.0% |
| AAGGAGGTGGCTGGTGGCAG+AGG | - | chr3.4:78618857-78618876 | MS.gene045389:CDS | 65.0% | |
| GAGGTGGCTGGTGGCAGAGG+TGG | - | chr3.4:78618860-78618879 | MS.gene045389:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 78617830 | 78618935 | 78617830 | ID=MS.gene045389 |
| chr3.4 | mRNA | 78617830 | 78618935 | 78617830 | ID=MS.gene045389.t1;Parent=MS.gene045389 |
| chr3.4 | exon | 78618614 | 78618935 | 78618614 | ID=MS.gene045389.t1.exon1;Parent=MS.gene045389.t1 |
| chr3.4 | CDS | 78618614 | 78618935 | 78618614 | ID=cds.MS.gene045389.t1;Parent=MS.gene045389.t1 |
| chr3.4 | exon | 78618055 | 78618150 | 78618055 | ID=MS.gene045389.t1.exon2;Parent=MS.gene045389.t1 |
| chr3.4 | CDS | 78618055 | 78618150 | 78618055 | ID=cds.MS.gene045389.t1;Parent=MS.gene045389.t1 |
| chr3.4 | exon | 78617830 | 78617966 | 78617830 | ID=MS.gene045389.t1.exon3;Parent=MS.gene045389.t1 |
| chr3.4 | CDS | 78617830 | 78617966 | 78617830 | ID=cds.MS.gene045389.t1;Parent=MS.gene045389.t1 |
| Gene Sequence |
| Protein sequence |
